Pregenerated sensors for VMN1R74 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047655Ensembl transcript IDs: ENSMUST00000050416.2, ENSMUST00000228471.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCTCTAACTGCATATGTAGCAGAAGATGGCCTAGTCAGCTTATATaGCCCAGTGCAGAAAAATGCCAGGGCCAGGAAGCAGGAGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: FSNCICSRRWPSQLI*PSAEKCQGQEAGVC Trigger: ACACACTCCTGCTTCCTGGCCCTGGCATTTTTCTGCACTGGGGCATATAAGCTGACTAGGCCATCTTCTGCTACATATGCAGTTAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR TCA 90 bp | ATGCTCCTCATTCACTACCAGGTCCTGTCTGTCTCTGAAATTGCCTaGTTCTGTGCAATGTTATTTGCTGACAGGAGTGCTTTTCAACTC | + |
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Preference number: 1 (lower is better) Translates to: MLLIHYQVLSVSEIA*FCAMLFADRSAFQL Trigger: GAGTTGAAAAGCACTCCTGTCAGCAAATAACATTGCACAGAATCAGGCAATTTCAGAGACAGACAGGACCTGGTAGTGAATGAGGAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 90 bp | ATGCTAGTGCCTAGCAAATACAGAAATGGATGCTCACAATCATATTaGATGGAACACAGGACCCCCAATGGAGAAGCTAGAGAAAGTACC | + |
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Preference number: 1 (lower is better) Translates to: MLVPSKYRNGCSQSY*MEHRTPNGEAREST Trigger: GGTACTTTCTCTAGCTTCTCCATTGGGGGTCCTGTGTTCCATCCAATATGATTGTGAGCATCCATTTCTGTATTTGCTAGGCACTAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 90 bp | GCCTGGTTCACCCTCTGTCTTTTATATTATGCTTCAGACTCCTTCTaGGTGCCTCCAGTTCTTTGTCTCATTCCACTGGCAATTGTTAAA | + |
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Preference number: 1 (lower is better) Translates to: AWFTLCLLYYASDSF*VPPVLCLIPLAIVK Trigger: TTTAACAATTGCCAGTGGAATGAGACAAAGAACTGGAGGCACCCAGAAGGAGTCTGAAGCATAATATAAAAGACAGAGGGTGAACCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR GCA 90 bp | GGTTCACCCTCTGTCTTTTATATTATGCTTCAGACTCCTTCTGGGTaGCTCCAGTTCTTTGTCTCATTCCACTGGCAATTGTTAAACCTT | + |
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Preference number: 1 (lower is better) Translates to: GSPSVFYIMLQTPSG*LQFFVSFHWQLLNL Trigger: AAGGTTTAACAATTGCCAGTGGAATGAGACAAAGAACTGGAGGCACCCAGAAGGAGTCTGAAGCATAATATAAAAGACAGAGGGTGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 90 bp | TGTAACTATATTTCCAGAGGATCCAACACATTTTTCTTGTCTCTGTaGGCAGCAGGAATGCCTCTTCTGTACATACTTATGTTATGCACA | + |
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Preference number: 1 (lower is better) Translates to: CNYISRGSNTFFLSL*AAGMPLLYILMLCT Trigger: TGTGCATAACATAAGTATGTACAGAAGAGGCATTCCTGCTGCCCACAGAGACAAGAAAAATGTGTTGGATCCTCTGGAAATATAGTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 90 bp | TCTACATGTGTCATTATTTCAGATCTAGGCAACTGGTCCACTTTCTaGCAGACAATCTCTCCTTCACATATATGGTCAAAGTACATGAAG | + |
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Preference number: 1 (lower is better) Translates to: STCVIISDLGNWSTF*QTISPSHIWSKYMK Trigger: CTTCATGTACTTTGACCATATATGTGAAGGAGAGATTGTCTGCCAGAAAGTGGACCAGTTGCCTAGATCTGAAATAATGACACATGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 90 bp | TGTGAAAGGAAAAACCAATTCCCATGTACATACTTGAAGACTCTTTaGAAGACTGTGAGCGTTTGGTCTTCATTTCTTCCTAGTTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: CERKNQFPCTYLKTL*KTVSVWSSFLPSWN Trigger: GTTCCAACTAGGAAGAAATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGGAATTGGTTTTTCCTTTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR GCA 90 bp | CCAGAGGATCCAACACATTTTTCTTGTCTCTGTGGGCAGCAGGAATaGCTCTTCTGTACATACTTATGTTATGCACAAAAATATATACAA | + |
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Preference number: 1 (lower is better) Translates to: PEDPTHFSCLCGQQE*LFCTYLCYAQKYIQ Trigger: TTGTATATATTTTTGTGCATAACATAAGTATGTACAGAAGAGGCATTCCTGCTGCCCACAGAGACAAGAAAAATGTGTTGGATCCTCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 90 bp | CAAAGTGTATGTTGTACTCAGCAAGTGGGTCTTGGCATCAATTTGTaGTTTGTAACCAAGAGCAATGGGAATAGTATATATTGTTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: QSVCCTQQVGLGINL*FVTKSNGNSIYCFG Trigger: CCCAAAACAATATATACTATTCCCATTGCTCTTGGTTACAAACCACAAATTGATGCCAAGACCCACTTGCTGAGTACAACATACACTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR GCA 90 bp | TATTTTTCTTTTCATTTGCCCACAGGCTCTATAGCTGTAACTTTATaGCTGGAACCGTTGGTTTATATACATTGTGATTCTGGTTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: YFSFHLPTGSIAVTL*LEPLVYIHCDSGCC Trigger: GCAACAACCAGAATCACAATGTATATAAACCAACGGTTCCAGGCATAAAGTTACAGCTATAGAGCCTGTGGGCAAATGAAAAGAAAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR TCA 90 bp | TATCAGTGGTCCATTCCTCTCCAACTGTTACTTCACAATGTTGTGTaGCTGGGCTTTGTTCCTAACATTTATAATTATTTGTCTATCTCT | + |
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Preference number: 1 (lower is better) Translates to: YQWSIPLQLLLHNVV*LGFVPNIYNYLSIS Trigger: AGAGATAGACAAATAATTATAAATGTTAGGAACAAAGCCCAGTCACACAACATTGTGAAGTAACAGTTGGAGAGGAATGGACCACTGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 90 bp | TGTCTGATTCACAGGAACAAAAGTAATCAATCAATTAGGAGTAATTaGGAAGAAACCATCTCTGTGATTTCACAAAGTCACAAGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: CLIHRNKSNQSIRSN*EETISVISQSHKEG Trigger: TCCTTCCTTGTGACTTTGTGAAATCACAGAGATGGTTTCTTCCCAATTACTCCTAATTGATTGATTACTTTTGTTCCTGTGAATCAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 90 bp | AGTGGTCCATTCCTCTCCAACTGTTACTTCACAATGTTGTGTGACTaGGCTTTGTTCCTAACATTTATAATTATTTGTCTATCTCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: SGPFLSNCYFTMLCD*ALFLTFIIICLSLR Trigger: TCTTAGAGATAGACAAATAATTATAAATGTTAGGAACAAAGCCCAGTCACACAACATTGTGAAGTAACAGTTGGAGAGGAATGGACCACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CAA 90 bp | TGGCAGACAATCTCTCCTTCACATATATGGTCAAAGTACATGAAGTaGGTTGTACGGCCTTGGAAATATATGGGTCAAGCTTGGGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: WQTISPSHIWSKYMK*VVRPWKYMGQAWGL Trigger: GAGGCCCCAAGCTTGACCCATATATTTCCAAGGCCGTACAACCAACTTCATGTACTTTGACCATATATGTGAAGGAGAGATTGTCTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR TCA 90 bp | CCCATGTACATACTTGAAGACTCTTTGGAAGACTGTGAGCGTTTGGTCTTCATTGGGATCATACCCTTATaGAACACTTCCCCTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PMYILEDSLEDCERLVFIGIIPL*NTSPLC Trigger: GCAGAGAGGGGAAGTGTTTCATAAGGGTATGATCCC...AATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGTACATACTTGAAGACTCTTTGGAAGACTGTGAGCGTTTGGTCTTCATTGCTTCAGACTCCTTCTaGGTGCCTCCAGTTCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: PMYILEDSLEDCERLVFIASDSF*VPPVLC Trigger: ACAAAGAACTGGAGGCACCCAGAAGGAGTCTGAAGC...AATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR GCA 90 bp | GATCCAGGTTCAGTTCCCAGAATCTACATGTGTCATTATTTCAGATCTAGGCAACAGACTCCTTCTGGGTaGCTCCAGTTCTTTGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: DPGSVPRIYMCHYFRSRQQTPSG*LQFFVS Trigger: TGAGACAAAGAACTGGAGGCACCCAGAAGGAGTCTG...TTGCCTAGATCTGAAATAATGACACATGTAGATTCTGGGAACTGAACCTGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTAAGCCTTTTTCTATGGAGATGTATTAGCCTGGTTCACCCTCTGTCTTTTCCCACATCACCACCCTaGTCCATGCTCATCCATTTC | + |
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Preference number: 2 (lower is better) Translates to: KVSLFLWRCISLVHPLSFPTSPP*SMLIHF Trigger: GAAATGGATGAGCATGGACCAGGGTGGTGATGTGGG...AAAAGACAGAGGGTGAACCAGGCTAATACATCTCCATAGAAAAAGGCTTACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | GATCCAGGTTCAGTTCCCAGAATCTACATGTGTCATTATTTCAGATCTAGGCAATGCTCACAATCATATTaGATGGAACACAGGACCCCC | + |
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Preference number: 2 (lower is better) Translates to: DPGSVPRIYMCHYFRSRQCSQSY*MEHRTP Trigger: GGGGGTCCTGTGTTCCATCCAATATGATTGTGAGCA...TTGCCTAGATCTGAAATAATGACACATGTAGATTCTGGGAACTGAACCTGGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR TCA 90 bp | GATCCAGGTTCAGTTCCCAGAATCTACATGTGTCATTATTTCAGATCTAGGCAAGGAGGAACAACAATATaGATTAACCAGTACCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DPGSVPRIYMCHYFRSRQGGTTI*INQYPQ Trigger: CTGGGGGTACTGGTTAATTCATATTGTTGTTCCTCC...TTGCCTAGATCTGAAATAATGACACATGTAGATTCTGGGAACTGAACCTGGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCACCAGTACTTGTAACTATATTTCCAGAGGATCCAACACATTTTTCTTGGCTTATATGCCCCAGTaGAGAAAAATGCCAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: CLTSTCNYISRGSNTFFLAYMPQ*RKMPGP Trigger: TGGCCCTGGCATTTTTCTGCACTGGGGCATATAAGC...CAAGAAAAATGTGTTGGATCCTCTGGAAATATAGTTACAAGTACTGGTGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | GATCCAGGTTCAGTTCCCAGAATCTACATGTGTCATTATTTCAGATCTAGGCAATTTTTCTTGTCTCTGTaGGCAGCAGGAATGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: DPGSVPRIYMCHYFRSRQFFLSL*AAGMPL Trigger: AAGAGGCATTCCTGCTGCCCACAGAGACAAGAAAAA...TTGCCTAGATCTGAAATAATGACACATGTAGATTCTGGGAACTGAACCTGGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CAA 90 bp | ACCAGTACTTGTAACTATATTTCCAGAGGATCCAACACATTTTTCTaGTCTCTGTGGGCAGCAGGAATGCCTCTTCTGTACATACTTATG | + |
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Preference number: 2 (lower is better) Translates to: TSTCNYISRGSNTFF*SLWAAGMPLLYILM Trigger: CATAAGTATGTACAGAAGAGGCATTCCTGCTGCCCACAGAGACAAGAAAAATGTGTTGGATCCTCTGGAAATATAGTTACAAGTACTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | CACATTTTTCTTGTCTCTGTGGGCAGCAGGAATGCCTCTTCTGTACATACTTATATATGTAGCAGAAGATaGCCTAGTCAGCTTATATGC | + |
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Preference number: 2 (lower is better) Translates to: HIFLVSVGSRNASSVHTYICSRR*PSQLIC Trigger: GCATATAAGCTGACTAGGCCATCTTCTGCTACATAT...ATAAGTATGTACAGAAGAGGCATTCCTGCTGCCCACAGAGACAAGAAAAATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGCCAGAAGATACTCAATTCATCTGATTCACCATCACATTTGGTTCTTTGGCACAATCATATTGGATaGAACACAGGACCCCCAATG | + |
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Preference number: 2 (lower is better) Translates to: HSQKILNSSDSPSHLVLWHNHIG*NTGPPM Trigger: CATTGGGGGTCCTGTGTTCCATCCAATATGATTGTG...CCAAAGAACCAAATGTGATGGTGAATCAGATGAATTGAGTATCTTCTGGCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGTACATACTTGAAGACTCTTTGGAAGACTGTGAGCGTTTGGTCTTCATTGTCCATATGACTGTTTaGGTATTTCAGCAAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: PMYILEDSLEDCERLVFIVHMTV*VFQQGS Trigger: TGAACCTTGCTGAAATACCCAAACAGTCATATGGAC...AATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTAAGCCTTTTTCTATGGAGATGTATTAGCCTGGTTCACCCTCTGTCTTTTCTTCCACCAATATCCTaGATGCATTTCAGGTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: KVSLFLWRCISLVHPLSFLPPIS*MHFRWY Trigger: ATACCACCTGAAATGCATTCAGGATATTGGTGGAAG...AAAAGACAGAGGGTGAACCAGGCTAATACATCTCCATAGAAAAAGGCTTACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCACCAGTACTTGTAACTATATTTCCAGAGGATCCAACACATTTTTCTTGCCTAGTCAGCTTATATaGCCCAGTGCAGAAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: CLTSTCNYISRGSNTFFLPSQLI*PSAEKC Trigger: GCATTTTTCTGCACTGGGGCATATAAGCTGACTAGG...CAAGAAAAATGTGTTGGATCCTCTGGAAATATAGTTACAAGTACTGGTGAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGTACATACTTGAAGACTCTTTGGAAGACTGTGAGCGTTTGGTCTTCATTCAGACAAAAACTCAATaGACGCTTCTCATATATTGC | + |
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Preference number: 2 (lower is better) Translates to: PMYILEDSLEDCERLVFIQTKTQ*TLLIYC Trigger: GCAATATATGAGAAGCGTCCATTGAGTTTTTGTCTG...AATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGTACATACTTGAAGACTCTTTGGAAGACTGTGAGCGTTTGGTCTTCATTGTAAGCCTTTTTCTATaGAGATGTATTAGCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: PMYILEDSLEDCERLVFIVSLFL*RCISLV Trigger: AACCAGGCTAATACATCTCCATAGAAAAAGGCTTAC...AATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CAA 90 bp | GTCATTCTTGTAGTTCATAATGTTCACGGCATGGTAAGACTATTATaGACTTCCTTCCACCAATATCCTGAATGCATTTCAGGTGGTATG | + |
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Preference number: 2 (lower is better) Translates to: VILVVHNVHGMVRLL*TSFHQYPECISGGM Trigger: CATACCACCTGAAATGCATTCAGGATATTGGTGGAAGGAAGTCAATAATAGTCTTACCATGCCGTGAACATTATGAACTACAAGAATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTTTGGAATTTCCCATTGTATTTACCGTGATGTTACCTGAACCATTAGAGAAAGGGAGTGAAGTATaGACACATGTTTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GSLEFPIVFTVMLPEPLEKGSEV*THVCVC Trigger: ACACACACAAACATGTGTGCATACTTCACTCCCTTT...CTCTAATGGTTCAGGTAACATCACGGTAAATACAATGGGAAATTCCAAAGAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGCCAGAAGATACTCAATTCATCTGATTCACCATCACATTTGGTTCTTTGGCACCAATATCCTGAATaGATTTCAGGTGGTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: HSQKILNSSDSPSHLVLWHQYPE*ISGGME Trigger: TTCCATACCACCTGAAATGCATTCAGGATATTGGTG...CCAAAGAACCAAATGTGATGGTGAATCAGATGAATTGAGTATCTTCTGGCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGTACATACTTGAAGACTCTTTGGAAGACTGTGAGCGTTTGGTCTTCATTTCTCCTTCACATATATaGTCAAAGTACATGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: PMYILEDSLEDCERLVFISPSHI*SKYMKL Trigger: CAACTTCATGTACTTTGACCATATATGTGAAGGAGA...AATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAACAAAAGTAATCAATCAATTAGGAGTAATTGGGAAGAAACCATCTCTGTTTGTGTGTGTCTTATaGAGGCACCCACAACTTTTG | + |
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Preference number: 2 (lower is better) Translates to: TGTKVINQLGVIGKKPSLFVCVL*RHPQLL Trigger: CAAAAGTTGTGGGTGCCTCCATAAGACACACACAAA...CAGAGATGGTTTCTTCCCAATTACTCCTAATTGATTGATTACTTTTGTTCCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGACAGGAGTGCTTTTCAACTCAAATGTGTATCCACAACATTGTCTACATTCAATTAGGAGTAATTaGGAAGAAACCATCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLTGVLFNSNVYPQHCLHSIRSN*EETISV Trigger: CACAGAGATGGTTTCTTCCCAATTACTCCTAATTGA...ATGTAGACAATGTTGTGGATACACATTTGAGTTGAAAAGCACTCCTGTCAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CAA 90 bp | TGTCTCATTCCACTGGCAATTGTTAAACCTTGTTCACTGGAGCATTaGAGATCCAAAACTGTGGAAATCAGGACAATTTTTATAACTATG | + |
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Preference number: 2 (lower is better) Translates to: CLIPLAIVKPCSLEH*RSKTVEIRTIFITM Trigger: CATAGTTATAAAAATTGTCCTGATTTCCACAGTTTTGGATCTCAAATGCTCCAGTGAACAAGGTTTAACAATTGCCAGTGGAATGAGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR-3UTR GCA 90 bp | TATAGTGTCTCACCAGTACTTGTAACTATATTTCCAGAGGATCCAACACATTTTACTCGTTTCTCTAACTaGATATGTAGCAGAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: YSVSPVLVTIFPEDPTHFTRFSN*ICSRRW Trigger: CCATCTTCTGCTACATATGCAGTTAGAGAAACGAGT...AAAATGTGTTGGATCCTCTGGAAATATAGTTACAAGTACTGGTGAGACACTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CAA 90 bp | CCATTCCTCTCCAACTGTTACTTCACAATGTTGTGTGACTGGGCTTaGTTCCTAACATTTATAATTATTTGTCTATCTCTAAGATTCCTA | + |
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Preference number: 2 (lower is better) Translates to: PFLSNCYFTMLCDWA*FLTFIIICLSLRFL Trigger: TAGGAATCTTAGAGATAGACAAATAATTATAAATGTTAGGAACAAAGCCCAGTCACACAACATTGTGAAGTAACAGTTGGAGAGGAATGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR GCA 72 bp | TGCATATGTAGCAGAAGATGGCCTAGTCAGCTTATATaGCCCAGTGCAGAAAAATGCCAGGGCCAGGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: CICSRRWPSQLI*PSAEKCQGQEA Trigger: TGCTTCCTGGCCCTGGCATTTTTCTGCACTGGGGCATATAAGCTGACTAGGCCATCTTCTGCTACATATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR GCA 72 bp | GATCTAAGGAACAGGGCAAAAGTCAGATCTAAGACCTaGACAGATGGCTCTAAGGCCTTCTGGTCAAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: DLRNRAKVRSKT*TDGSKAFWSRA Trigger: GGCTCTTGACCAGAAGGCCTTAGAGCCATCTGTGCAGGTCTTAGATCTGACTTTTGCCCTGTTCCTTAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 72 bp | TTGGTTGTACGGCCTTGGAAATATATGGGTCAAGCTTaGGGCCTCTCCAATGTCCAGACATCCTTGGATATT | + |
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Preference number: 3 (lower is better) Translates to: LVVRPWKYMGQA*GLSNVQTSLDI Trigger: AATATCCAAGGATGTCTGGACATTGGAGAGGCCCCAAGCTTGACCCATATATTTCCAAGGCCGTACAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR TCA 72 bp | TGTCTTATGGAGGCACCCACAACTTTTGTAAGTTCCTaGGTGAAGTGGTCCTGTCATAGCCAGAAGATACTC | + |
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Preference number: 3 (lower is better) Translates to: CLMEAPTTFVSS*VKWSCHSQKIL Trigger: GAGTATCTTCTGGCTATGACAGGACCACTTCACTCAGGAACTTACAAAAGTTGTGGGTGCCTCCATAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 72 bp | ACCCTCTGTCTTTTATATTATGCTTCAGACTCCTTCTaGGTGCCTCCAGTTCTTTGTCTCATTCCACTGGCA | + |
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Preference number: 3 (lower is better) Translates to: TLCLLYYASDSF*VPPVLCLIPLA Trigger: TGCCAGTGGAATGAGACAAAGAACTGGAGGCACCCAGAAGGAGTCTGAAGCATAATATAAAAGACAGAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR TCA 72 bp | ATTCACTACCAGGTCCTGTCTGTCTCTGAAATTGCCTaGTTCTGTGCAATGTTATTTGCTGACAGGAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: IHYQVLSVSEIA*FCAMLFADRSA Trigger: AGCACTCCTGTCAGCAAATAACATTGCACAGAATCAGGCAATTTCAGAGACAGACAGGACCTGGTAGTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| 3UTR CCA 72 bp | CCTAGCAAATACAGAAATGGATGCTCACAATCATATTaGATGGAACACAGGACCCCCAATGGAGAAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSKYRNGCSQSY*MEHRTPNGEAR Trigger: TCTAGCTTCTCCATTGGGGGTCCTGTGTTCCATCCAATATGATTGTGAGCATCCATTTCTGTATTTGCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | ATATGGTCAAAGTACATGAAGTTGGTTGTACGGCCTTaGAAATATATGGGTCAAGCTTGGGGCCTCTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: IWSKYMKLVVRP*KYMGQAWGLSN Trigger: ATTGGAGAGGCCCCAAGCTTGACCCATATATTTCCAAGGCCGTACAACCAACTTCATGTACTTTGACCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | TCCACTTTCTGGCAGACAATCTCTCCTTCACATATATaGTCAAAGTACATGAAGTTGGTTGTACGGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: STFWQTISPSHI*SKYMKLVVRPW Trigger: CCAAGGCCGTACAACCAACTTCATGTACTTTGACCATATATGTGAAGGAGAGATTGTCTGCCAGAAAGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR GCA 72 bp | GAATTAACCAGTACCCCCAGAACTCGTTTCTCTAACTaGATATGTAGCAGAAGATGGCCTAGTCAGCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: ELTSTPRTRFSN*ICSRRWPSQLI Trigger: TATAAGCTGACTAGGCCATCTTCTGCTACATATGCAGTTAGAGAAACGAGTTCTGGGGGTACTGGTTAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR GCA 72 bp | TCTGTCTTTTATATTATGCTTCAGACTCCTTCTGGGTaGCTCCAGTTCTTTGTCTCATTCCACTGGCAATTG | + |
|
Preference number: 3 (lower is better) Translates to: SVFYIMLQTPSG*LQFFVSFHWQL Trigger: CAATTGCCAGTGGAATGAGACAAAGAACTGGAGGCACCCAGAAGGAGTCTGAAGCATAATATAAAAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | AGAACTCGTTTCTCTAACTGCATATGTAGCAGAAGATaGCCTAGTCAGCTTATATGCCCCAGTGCAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RTRFSNCICSRR*PSQLICPSAEK Trigger: TTTTTCTGCACTGGGGCATATAAGCTGACTAGGCCATCTTCTGCTACATATGCAGTTAGAGAAACGAGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | GCAAATACAGAAATGGATGCTCACAATCATATTGGATaGAACACAGGACCCCCAATGGAGAAGCTAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ANTEMDAHNHIG*NTGPPMEKLEK Trigger: TTTCTCTAGCTTCTCCATTGGGGGTCCTGTGTTCCATCCAATATGATTGTGAGCATCCATTTCTGTATTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | ATTTCCAGAGGATCCAACACATTTTTCTTGTCTCTGTaGGCAGCAGGAATGCCTCTTCTGTACATACTTATG | + |
|
Preference number: 3 (lower is better) Translates to: ISRGSNTFFLSL*AAGMPLLYILM Trigger: CATAAGTATGTACAGAAGAGGCATTCCTGCTGCCCACAGAGACAAGAAAAATGTGTTGGATCCTCTGGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | GTCATTATTTCAGATCTAGGCAACTGGTCCACTTTCTaGCAGACAATCTCTCCTTCACATATATGGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VIISDLGNWSTF*QTISPSHIWSK Trigger: CTTTGACCATATATGTGAAGGAGAGATTGTCTGCCAGAAAGTGGACCAGTTGCCTAGATCTGAAATAATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | GAATCTACATGTGTCATTATTTCAGATCTAGGCAACTaGTCCACTTTCTGGCAGACAATCTCTCCTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: ESTCVIISDLGN*STFWQTISPSH Trigger: ATGTGAAGGAGAGATTGTCTGCCAGAAAGTGGACCAGTTGCCTAGATCTGAAATAATGACACATGTAGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | AAGACTGTGAGCGTTTGGTCTTCATTTCTTCCTAGTTaGAACTCACTGTTCGCTTACATGAGCTACATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KTVSVWSSFLPS*NSLFAYMSYIH Trigger: ATGAATGTAGCTCATGTAAGCGAACAGTGAGTTCCAACTAGGAAGAAATGAAGACCAAACGCTCACAGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | ACATACTTGAAGACTCTTTGGAAGACTGTGAGCGTTTaGTCTTCATTTCTTCCTAGTTGGAACTCACTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TYLKTLWKTVSV*SSFLPSWNSLF Trigger: GAACAGTGAGTTCCAACTAGGAAGAAATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCCAGGTTCAGTTCCCAGAATCTACATGTGTCATTATTTCAGATCTAGGCAATGTCCATATGACTGTTaGGGTATTTCAGCAAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DPGSVPRIYMCHYFRSRQCPYDC*GISARF Trigger: GAACCTTGCTGAAATACCCAAACAGTCATATGGACA...TTGCCTAGATCTGAAATAATGACACATGTAGATTCTGGGAACTGAACCTGGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR-3UTR CAA 90 bp | TATAGTGTCTCACCAGTACTTGTAACTATATTTCCAGAGGATCCAACACATTTTATGCTCACAATCATATaGGATGGAACACAGGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: YSVSPVLVTIFPEDPTHFMLTII*DGTQDP Trigger: GGGGTCCTGTGTTCCATCCAATATGATTGTGAGCAT...AAAATGTGTTGGATCCTCTGGAAATATAGTTACAAGTACTGGTGAGACACTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR TCA 72 bp | AGACAATCTCTCCTTCACATATATGGTCAAAGTACATaGAGTTGGTTGTACGGCCTTGGAAATATATGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RQSLLHIYGQST*SWLYGLGNIWV Trigger: GACCCATATATTTCCAAGGCCGTACAACCAACTTCATGTACTTTGACCATATATGTGAAGGAGAGATTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR GCA 72 bp | CCAACACATTTTTCTTGTCTCTGTGGGCAGCAGGAATaGCTCTTCTGTACATACTTATGTTATGCACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PTHFSCLCGQQE*LFCTYLCYAQK Trigger: TTTTTGTGCATAACATAAGTATGTACAGAAGAGGCATTCCTGCTGCCCACAGAGACAAGAAAAATGTGTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR GCA 72 bp | GAACCGTTGGTTTATATACATTGTGATTCTGGTTGTTaGTTCTACTCAAGAGGAAGCTCCTACATTAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: EPLVYIHCDSGC*FYSRGSSYISI Trigger: GATGCTAATGTAGGAGCTTCCTCTTGAGTAGAAGCAACAACCAGAATCACAATGTATATAAACCAACGGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTGACAGGAGTGCTTTTCAACTCAAATGTGTATCCACAACATTGTCTACATTACCCAGAAACTTTTTaGATGAGTTCTGCATCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLTGVLFNSNVYPQHCLHYPETF*MSSASC Trigger: GCAAGATGCAGAACTCATCAAAAAAGTTTCTGGGTA...ATGTAGACAATGTTGTGGATACACATTTGAGTTGAAAAGCACTCCTGTCAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTAAGCCTTTTTCTATGGAGATGTATTAGCCTGGTTCACCCTCTGTCTTTTGATTCACCATCACATTaGGTTCTTTGGAATTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KVSLFLWRCISLVHPLSFDSPSH*VLWNFP Trigger: TGGGAAATTCCAAAGAACCAAATGTGATGGTGAATC...AAAAGACAGAGGGTGAACCAGGCTAATACATCTCCATAGAAAAAGGCTTACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR TCA 72 bp | CTAATTGGGAGTCATGAAGGAAGGCAAGGCAATGAATaGTCTTCGTATTCTTTTCTTGAAGCCATACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LIGSHEGRQGNE*SSYSFLEAILS Trigger: AGAAAGTATGGCTTCAAGAAAAGAATACGAAGATCATTCATTGCCTTGCCTTCCTTCATGACTCCCAATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR GCA 72 bp | TTTCATTTGCCCACAGGCTCTATAGCTGTAACTTTATaGCTGGAACCGTTGGTTTATATACATTGTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: FHLPTGSIAVTL*LEPLVYIHCDS Trigger: AGAATCACAATGTATATAAACCAACGGTTCCAGGCATAAAGTTACAGCTATAGAGCCTGTGGGCAAATGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | TGTTGTACTCAGCAAGTGGGTCTTGGCATCAATTTGTaGTTTGTAACCAAGAGCAATGGGAATAGTATATAT | + |
|
Preference number: 3 (lower is better) Translates to: CCTQQVGLGINL*FVTKSNGNSIY Trigger: ATATATACTATTCCCATTGCTCTTGGTTACAAACCACAAATTGATGCCAAGACCCACTTGCTGAGTACAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR TCA 72 bp | CACTGGCAATTGTTAAACCTTGTTCACTGGAGCATTTaGGATCCAAAACTGTGGAAATCAGGACAATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HWQLLNLVHWSI*DPKLWKSGQFL Trigger: TAAAAATTGTCCTGATTTCCACAGTTTTGGATCTCAAATGCTCCAGTGAACAAGGTTTAACAATTGCCAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR TCA 72 bp | AACATTCTCACTCTGCAATTTTTACTCTCAGGTAGCTaGGGCTTTCCTATCCTTTATCTCCATTCATTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: NILTLQFLLSGS*GFPILYLHSLV Trigger: AACTAATGAATGGAGATAAAGGATAGGAAAGCCTCAGCTACCTGAGAGTAAAAATTGCAGAGTGAGAATGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAACAAAAGTAATCAATCAATTAGGAGTAATTGGGAAGAAACCATCTCTGAAGGAAAAAGATGCGTaGAATAGTCTCTCTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TGTKVINQLGVIGKKPSLKEKDA*NSLSLP Trigger: AGGAAGAGAGAGACTATTCAACGCATCTTTTTCCTT...CAGAGATGGTTTCTTCCCAATTACTCCTAATTGATTGATTACTTTTGTTCCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR TCA 72 bp | CAATGCCAAGACATCCTTGAGGATTTCTTTAAACTCTaGAGGACAACTAAGTTGATAGTCATGAAGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QCQDILEDFFKL*RTTKLIVMKEK Trigger: TTTTTCCTTCATGACTATCAACTTAGTTGTCCTTCAGAGTTTAAAGAAATCCTCAAGGATGTCTTGGCATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | TGTTGTAGACCATGCCGCATTTATAAACTAATTGTATaGATAGTTAAATGTGTAGCCCCTTATTTGGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: CCRPCRIYKLIV*IVKCVAPYLGL Trigger: TAACCCCAAATAAGGGGCTACACATTTAACTATCCATACAATTAGTTTATAAATGCGGCATGGTCTACAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | CACAGGAACAAAAGTAATCAATCAATTAGGAGTAATTaGGAAGAAACCATCTCTGTGATTTCACAAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: HRNKSNQSIRSN*EETISVISQSH Trigger: GTGACTTTGTGAAATCACAGAGATGGTTTCTTCCCAATTACTCCTAATTGATTGATTACTTTTGTTCCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CCA 72 bp | TTTCCTATCCTTTATCTCCATTCATTAGTTTATCAGTaGTCCATTCCTCTCCAACTGTTACTTCACAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: FPILYLHSLVYQ*SIPLQLLLHNV Trigger: AACATTGTGAAGTAACAGTTGGAGAGGAATGGACCACTGATAAACTAATGAATGGAGATAAAGGATAGGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | GTTGGTTGTACGGCCTTGGAAATATATGGGTCAAGCTaGGGGCCTCTCCAATGTCCAGACATCCTTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: VGCTALEIYGSS*GPLQCPDILGY Trigger: ATATCCAAGGATGTCTGGACATTGGAGAGGCCCCAAGCTTGACCCATATATTTCCAAGGCCGTACAACCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| CDS-3UTR GCA 90 bp | GCAAATACAGAAATGGATGCTCACAATCATATTGGATGGAACACAGGACCCCCAGCGCAGTTGCAAAGTTaGCTGAAGCAAACGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ANTEMDAHNHIGWNTGPPAQLQS*LKQTMN Trigger: GTTCATCGTTTGCTTCAGGCAACTTTGCAACTGCGC...TGGGGGTCCTGTGTTCCATCCAATATGATTGTGAGCATCCATTTCTGTATTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCTTTGGAATTTCCCATTGTATTTACCGTGATGTTACCTGAACCATTAGAGTACAAGCCAGCAAAGTaGGCAGGAGGGACCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSLEFPIVFTVMLPEPLEYKPAK*AGGTKV Trigger: TACCTTGGTCCCTCCTGCTCACTTTGCTGGCTTGTA...CTCTAATGGTTCAGGTAACATCACGGTAAATACAATGGGAAATTCCAAAGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | TCCTCATTCACTACCAGGTCCTGTCTGTCTCTGAAATaGCCTGATTCTGTGCAATGTTATTTGCTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSFTTRSCLSLK*PDSVQCYLLTG Trigger: TCCTGTCAGCAAATAACATTGCACAGAATCAGGCAATTTCAGAGACAGACAGGACCTGGTAGTGAATGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| CDS-3UTR CCA 90 bp | GCAAATACAGAAATGGATGCTCACAATCATATTGGATGGAACACAGGACCCCCAAGAGAATACTCACCATaGAGACACTTGAATAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ANTEMDAHNHIGWNTGPPREYSP*RHLNRP Trigger: TGGCCTATTCAAGTGTCTCCATGGTGAGTATTCTCT...TGGGGGTCCTGTGTTCCATCCAATATGATTGTGAGCATCCATTTCTGTATTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | CTGGGCTACCATGAAACCCTGCATCATACTCTAATGTaGACTAGCCAAATATTTTGTGTGTGTCTTATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGYHETLHHTLM*TSQIFCVCLME Trigger: CTCCATAAGACACACACAAAATATTTGGCTAGTCAACATTAGAGTATGATGCAGGGTTTCATGGTAGCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGTTCAGTTCCCAGAATCTACATGTGTCATTATTTCAGATCTAGGCAAATTCCCATGGCAATCTaGAAGAAGAGGAAAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DPGSVPRIYMCHYFRSRQIPMAI*KKRKIP Trigger: TGGAATTTTCCTCTTCTTCCAGATTGCCATGGGAAT...TTGCCTAGATCTGAAATAATGACACATGTAGATTCTGGGAACTGAACCTGGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGACAGGAGTGCTTTTCAACTCAAATGTGTATCCACAACATTGTCTACATTGCCAATTATTCCCATaGCAATCTGGAAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTGVLFNSNVYPQHCLHCQLFP*QSGRRG Trigger: TCCTCTTCTTCCAGATTGCCATGGGAATAATTGGCA...ATGTAGACAATGTTGTGGATACACATTTGAGTTGAAAAGCACTCCTGTCAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | GAAGAACTGAGAACTTTCCCCAATGCCAAGACATCCTaGAGGATTTCTTTAAACTCTGAAGGACAACTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EELRTFPNAKTS*RISLNSEGQLS Trigger: ACTTAGTTGTCCTTCAGAGTTTAAAGAAATCCTCAAGGATGTCTTGGCATTGGGGAAAGTTCTCAGTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | ATCTCTCCTTCACATATATGGTCAAAGTACATGAAGTaGGTTGTACGGCCTTGGAAATATATGGGTCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISPSHIWSKYMK*VVRPWKYMGQA Trigger: AGCTTGACCCATATATTTCCAAGGCCGTACAACCAACTTCATGTACTTTGACCATATATGTGAAGGAGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | GAAAAACCAATTCCCATGTACATACTTGAAGACTCTTaGGAAGACTGTGAGCGTTTGGTCTTCATTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKPIPMYILEDS*EDCERLVFISS Trigger: GGAAGAAATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGGAATTGGTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| CDS-3UTR TCA 90 bp | GATCCAGGTTCAGTTCCCAGAATCTACATGTGTCATTATTTCAGATCTAGGCAACACTGTGGATATGTTTaGCTTGTTTCTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DPGSVPRIYMCHYFRSRQHCGYV*LVSYVC Trigger: ACAGACATAAGAAACAAGTCAAACATATCCACAGTG...TTGCCTAGATCTGAAATAATGACACATGTAGATTCTGGGAACTGAACCTGGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | AAATGTGAAAGGAAAAACCAATTCCCATGTACATACTaGAAGACTCTTTGGAAGACTGTGAGCGTTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCERKNQFPCTY*KTLWKTVSVWS Trigger: AGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGGAATTGGTTTTTCCTTTCACATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| CDS-3UTR TCA 90 bp | TGTACACAAATTTTGCTAACTAACAGCACTGACTGTTCTTATAGAAGTCCCAGTCTGTGGAATACCTTTTaGGATGATGAACAGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: CTQILLTNSTDCSYRSPSLWNTF*DDEQAI Trigger: AATTGCCTGTTCATCATCTCAAAAGGTATTCCACAG...ACTGGGACTTCTATAAGAACAGTCAGTGCTGTTAGTTAGCAAAATTTGTGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTAAGCCTTTTTCTATGGAGATGTATTAGCCTGGTTCACCCTCTGTCTTTTACTTTTAAAAAGTGCTaGGCACTGTGGATATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVSLFLWRCISLVHPLSFTFKKC*ALWICL Trigger: CAAACATATCCACAGTGCTCAGCACTTTTTAAAAGT...AAAAGACAGAGGGTGAACCAGGCTAATACATCTCCATAGAAAAAGGCTTACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | GTAGTTCATAATGTTCACGGCATGGTAAGACTATTATaGACTTCCTTCCACCAATATCCTGAATGCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVHNVHGMVRLL*TSFHQYPECIS Trigger: TGAAATGCATTCAGGATATTGGTGGAAGGAAGTCAATAATAGTCTTACCATGCCGTGAACATTATGAACTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | ACAACTAAGTTGATAGTCATGAAGGAAAAAGATGCGTaGAATAGTCTCTCTCTTCCTTTCTTCAAGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TTKLIVMKEKDA*NSLSLPFFKPH Trigger: ATGTGGCTTGAAGAAAGGAAGAGAGAGACTATTCAACGCATCTTTTTCCTTCATGACTATCAACTTAGTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | CATTCAGACAAAAACTCAATGGACGCTTCTCATATATaGCTTTTTATGGCTTCAGAGATGGGCATAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: HSDKNSMDASHI*LFMASEMGIIF Trigger: GAATATTATGCCCATCTCTGAAGCCATAAAAAGCAATATATGAGAAGCGTCCATTGAGTTTTTGTCTGAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | AATAATATCAGAACAGTTCGGGGATGTACACAAATTTaGCTAACTAACAGCACTGACTGTTCTTATAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNIRTVRGCTQI*LTNSTDCSYRS Trigger: ACTTCTATAAGAACAGTCAGTGCTGTTAGTTAGCAAAATTTGTGTACATCCCCGAACTGTTCTGATATTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| 3UTR CAA 72 bp | CTAATTGTATGGATAGTTAAATGTGTAGCCCCTTATTaGGGGTTATTTGCTCTGAAATTCCTTGTAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIVWIVKCVAPY*GLFALKFLVNG Trigger: ACCATTTACAAGGAATTTCAGAGCAAATAACCCCAAATAAGGGGCTACACATTTAACTATCCATACAATTAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
||
| CDS TCA 90 bp | GACTTGTTTCTTATGTCTGTAGAGAATACTCACCATGGAGACACTTaGATAGGCCATGAGACCCAGACACAGTCCATCACAGAAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: DLFLMSVENTHHGDT*IGHETQTQSITEAQ Trigger: CTGTGCTTCTGTGATGGACTGTGTCTGGGTCTCATGGCCTATTCAAGTGTCTCCATGGTGAGTATTCTCTACAGACATAAGAAACAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
||
| CDS-3UTR CAA 90 bp | GATCCAGGTTCAGTTCCCAGAATCTACATGTGTCATTATTTCAGATCTAGGCAAGGGGACCTGACACTCTaGCTGCAGCCAATATGTTTA | + |
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Preference number: 5 (lower is better) Translates to: DPGSVPRIYMCHYFRSRQGDLTL*LQPICL Trigger: TAAACATATTGGCTGCAGCAAGAGTGTCAGGTCCCC...TTGCCTAGATCTGAAATAATGACACATGTAGATTCTGGGAACTGAACCTGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| CDS TCA 90 bp | TATGTCTGTAGAGAATACTCACCATGGAGACACTTGAATAGGCCATaGGACCCAGACACAGTCCATCACAGAAGCACAGCAAGAATAAAT | + |
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Preference number: 5 (lower is better) Translates to: YVCREYSPWRHLNRP*DPDTVHHRSTARIN Trigger: ATTTATTCTTGCTGTGCTTCTGTGATGGACTGTGTCTGGGTCTCATGGCCTATTCAAGTGTCTCCATGGTGAGTATTCTCTACAGACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS-3UTR CAA 90 bp | CATAGCCAGAAGATACTCAATTCATCTGATTCACCATCACATTTGGTTCTTTGGGAGGGACCAAGGTACTaGGTGGCTCTGTGTTTAAAC | + |
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Preference number: 5 (lower is better) Translates to: HSQKILNSSDSPSHLVLWEGPRY*VALCLN Trigger: GTTTAAACACAGAGCCACCAAGTACCTTGGTCCCTC...CCAAAGAACCAAATGTGATGGTGAATCAGATGAATTGAGTATCTTCTGGCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| CDS-3UTR CAA 90 bp | TGTACACAAATTTTGCTAACTAACAGCACTGACTGTTCTTATAGAAGTCCCAGTAGCGCAGTTGCAAAGTaGCCTGAAGCAAACGATGAA | + |
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Preference number: 5 (lower is better) Translates to: CTQILLTNSTDCSYRSPSSAVAK*PEANDE Trigger: TTCATCGTTTGCTTCAGGCAACTTTGCAACTGCGCT...ACTGGGACTTCTATAAGAACAGTCAGTGCTGTTAGTTAGCAAAATTTGTGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| CDS TCA 90 bp | CTTCAGGAGAGACTTTTAAAAAGTGCTGAGCACTGTGGATATGTTTaGCTTGTTTCTTATGTCTGTAGAGAATACTCACCATGGAGACAC | + |
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Preference number: 5 (lower is better) Translates to: LQERLLKSAEHCGYV*LVSYVCREYSPWRH Trigger: GTGTCTCCATGGTGAGTATTCTCTACAGACATAAGAAACAAGTCAAACATATCCACAGTGCTCAGCACTTTTTAAAAGTCTCTCCTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS-3UTR CAA 90 bp | CATAGCCAGAAGATACTCAATTCATCTGATTCACCATCACATTTGGTTCTTTGGATGATGAACAGGCAATaGGCAAAAGTCAAGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: HSQKILNSSDSPSHLVLWMMNRQ*AKVKCS Trigger: AGAGCACTTGACTTTTGCCAATTGCCTGTTCATCAT...CCAAAGAACCAAATGTGATGGTGAATCAGATGAATTGAGTATCTTCTGGCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| CDS-3UTR CAA 90 bp | CCCATGTACATACTTGAAGACTCTTTGGAAGACTGTGAGCGTTTGGTCTTCATTGTGGATATGTTTGACTaGTTTCTTATGTCTGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: PMYILEDSLEDCERLVFIVDMFD*FLMSVE Trigger: CTCTACAGACATAAGAAACAAGTCAAACATATCCAC...AATGAAGACCAAACGCTCACAGTCTTCCAAAGAGTCTTCAAGTATGTACATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| CDS-3UTR CAA 90 bp | TATAGTGTCTCACCAGTACTTGTAACTATATTTCCAGAGGATCCAACACATTTTATAAATACAGCGCAGTaGCAAAGTTGCCTGAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: YSVSPVLVTIFPEDPTHFINTAQ*QSCLKQ Trigger: TTGCTTCAGGCAACTTTGCAACTGCGCTGTATTTAT...AAAATGTGTTGGATCCTCTGGAAATATAGTTACAAGTACTGGTGAGACACTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228471.2 |
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| CDS TCA 72 bp | AGAGAATACTCACCATGGAGACACTTGAATAGGCCATaGGACCCAGACACAGTCCATCACAGAAGCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: REYSPWRHLNRP*DPDTVHHRSTA Trigger: TGCTGTGCTTCTGTGATGGACTGTGTCTGGGTCTCATGGCCTATTCAAGTGTCTCCATGGTGAGTATTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS CAA 90 bp | GACACAGTCCATCACAGAAGCACAGCAAGAATAAATACAGCGCAGTaGCAAAGTTGCCTGAAGCAAACGATGAACAGTACCCAAGATGCA | + |
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Preference number: 6 (lower is better) Translates to: DTVHHRSTARINTAQ*QSCLKQTMNSTQDA Trigger: TGCATCTTGGGTACTGTTCATCGTTTGCTTCAGGCAACTTTGCAACTGCGCTGTATTTATTCTTGCTGTGCTTCTGTGATGGACTGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS CAA 90 bp | CCATCACAGAAGCACAGCAAGAATAAATACAGCGCAGTTGCAAAGTaGCCTGAAGCAAACGATGAACAGTACCCAAGATGCATCCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: PSQKHSKNKYSAVAK*PEANDEQYPRCILL Trigger: TAACAGGATGCATCTTGGGTACTGTTCATCGTTTGCTTCAGGCAACTTTGCAACTGCGCTGTATTTATTCTTGCTGTGCTTCTGTGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS CAA 72 bp | AAGCACAGCAAGAATAAATACAGCGCAGTTGCAAAGTaGCCTGAAGCAAACGATGAACAGTACCCAAGATGC | + |
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Preference number: 6 (lower is better) Translates to: KHSKNKYSAVAK*PEANDEQYPRC Trigger: GCATCTTGGGTACTGTTCATCGTTTGCTTCAGGCAACTTTGCAACTGCGCTGTATTTATTCTTGCTGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS CAA 72 bp | CATCACAGAAGCACAGCAAGAATAAATACAGCGCAGTaGCAAAGTTGCCTGAAGCAAACGATGAACAGTACC | + |
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Preference number: 6 (lower is better) Translates to: HHRSTARINTAQ*QSCLKQTMNST Trigger: GGTACTGTTCATCGTTTGCTTCAGGCAACTTTGCAACTGCGCTGTATTTATTCTTGCTGTGCTTCTGTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS CAA 72 bp | GTCTGTGGAATACCTTTTGAGATGATGAACAGGCAATaGGCAAAAGTCAAGTGCTCTATGATCAGGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: VCGIPFEMMNRQ*AKVKCSMIRSL Trigger: CAAAGACCTGATCATAGAGCACTTGACTTTTGCCAATTGCCTGTTCATCATCTCAAAAGGTATTCCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS CAA 90 bp | TTTGACAGTGTCTGTGGAATACCTTTTGAGATGATGAACAGGCAATaGGCAAAAGTCAAGTGCTCTATGATCAGGTCTTTGGGCATTAAA | + |
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Preference number: 6 (lower is better) Translates to: FDSVCGIPFEMMNRQ*AKVKCSMIRSLGIK Trigger: TTTAATGCCCAAAGACCTGATCATAGAGCACTTGACTTTTGCCAATTGCCTGTTCATCATCTCAAAAGGTATTCCACAGACACTGTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS TCA 72 bp | GTGGCTCTGTCTTCAGGAGAGACTTTTAAAAAGTGCTaGGCACTGTGGATATGTTTGACTTGTTTCTTATGT | + |
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Preference number: 6 (lower is better) Translates to: VALSSGETFKKC*ALWICLTCFLC Trigger: ACATAAGAAACAAGTCAAACATATCCACAGTGCTCAGCACTTTTTAAAAGTCTCTCCTGAAGACAGAGCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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| CDS GCA 72 bp | TTTGAGATGATGAACAGGCAATTGGCAAAAGTCAAGTaGTCTATGATCAGGTCTTTGGGCATTAAATATTTT | + |
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Preference number: 6 (lower is better) Translates to: FEMMNRQLAKVK*SMIRSLGIKYF Trigger: AAAATATTTAATGCCCAAAGACCTGATCATAGAGCACTTGACTTTTGCCAATTGCCTGTTCATCATCTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050416.2 ENSMUST00000228471.2 |
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