Pregenerated sensors for VMN1R72 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095430Ensembl transcript IDs: ENSMUST00000053134.4, ENSMUST00000209638.3, ENSMUST00000227010.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTATATGCCTCAGGAAGGGGGAAAGCCAGGGCCAAGAATTGGGAGTaGGAGTGGGAGGGTAGAGGAATGGAGGGAGGTTTGGGGGACTTT | + |
|
Preference number: 1 (lower is better) Translates to: LYASGRGKARAKNWE*EWEGRGMEGGLGDF Trigger: AAAGTCCCCCAAACCTCCCTCCATTCCTCTACCCTCCCACTCCCACTCCCAATTCTTGGCCCTGGCTTTCCCCCTTCCTGAGGCATATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 90 bp | CAACAATATGAACTACCCAGTACCCCTGGAGCTCATATCTCTAGCTaGATATATAGCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGA | + |
|
Preference number: 1 (lower is better) Translates to: QQYELPSTPGAHISS*IYSRRWPSWPSLGR Trigger: TCTTCCCAATGATGGCCAACTAGGCCATCTTCTGCTATATATGCAGCTAGAGATATGAGCTCCAGGGGTACTGGGTAGTTCATATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 90 bp | AGCCTCCAAATGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAGGGACCCTGATATAGCTGTCTCTTGTGAGACTATACCAAGA | + |
|
Preference number: 1 (lower is better) Translates to: SLQMLTPLHTLARFC*RDPDIAVSCETIPR Trigger: TCTTGGTATAGTCTCACAAGAGACAGCTATATCAGGGTCCCTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCATTTGGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 90 bp | GAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTaGCCACTTTTTCCCTATCTATTCAACATTGTACTTGAAGCCCTA | + |
|
Preference number: 1 (lower is better) Translates to: EKLEAIPLKSGTRQG*PLFPYLFNIVLEAL Trigger: TAGGGCTTCAAGTACAATGTTGAATAGATAGGGAAAAAGTGGGCAGCCTTGTCTAGTCCCTGATTTTAGTGGGATTGCTTCCAGCTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 90 bp | AACCTCCAAACACTGACACCATTGCATACACCAGCAAGATTTTTCTaGAAGATCCCTGATATAGTCTCTTTGAGGCTATGCCGTGTCCTA | + |
|
Preference number: 1 (lower is better) Translates to: NLQTLTPLHTPARFF*KIPDIVSLRLCRVL Trigger: TAGGACACGGCATAGCCTCAAAGAGACTATATCAGGGATCTTTCAGAAAAATCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 90 bp | CAAACATACAGCCATATACAGATCTATCATACTGCTTTTTCAACATaGTTGCTTCTTGTACTTCTGCCAACACCATCCCTGGTCAAGCTT | + |
|
Preference number: 1 (lower is better) Translates to: QTYSHIQIYHTAFST*LLLVLLPTPSLVKL Trigger: AAGCTTGACCAGGGATGGTGTTGGCAGAAGTACAAGAAGCAAGCATGTTGAAAAAGCAGTATGATAGATCTGTATATGGCTGTATGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 90 bp | TGCTCCACCATGTTCGTAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGTTCCTCAACAGAGGAATTTATACAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: CSTMFVAALFIIARS*KEPRCSSTEEFIQK Trigger: TTTCTGTATAAATTCCTCTGTTGAGGAACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTACGAACATGGTGGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 90 bp | TACTCACCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATaGATGGACTTCGAGGGCATCATCCTGAGTGAGGCAACCCAATCA | + |
|
Preference number: 1 (lower is better) Translates to: YSPIKKNEFMKFLGK*MDFEGIILSEATQS Trigger: TGATTGGGTTGCCTCACTCAGGATGATGCCCTCGAAGTCCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGGTGAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 90 bp | AAGAAAGAAATTAAAGAAGATCGTAGAAGATGGAAAGATCTCCCATaGTCATGGATTGGCAGGACCAATATAGTGAAAATGGCTATCTTG | + |
|
Preference number: 1 (lower is better) Translates to: KKEIKEDRRRWKDLP*SWIGRTNIVKMAIL Trigger: CAAGATAGCCATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTTCTACGATCTTCTTTAATTTCTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 90 bp | CACAGAAAACAGAAAAATGAAGATACATACAGAAATACACATAGATaGAGCACACACACATCCGCTCTGTGTGTATGTGTTTATGTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: HRKQKNEDTYRNTHR*STHTSALCVCVYVS Trigger: TGAAACATAAACACATACACACAGAGCGGATGTGTGTGTGCTGCATCTATGTGTATTTCTGTATGTATCTTCATTTTTCTGTTTTCTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 90 bp | TCAACAAATGGTGCTGGCATAACTGGTAGTTATCATGGAAAAGTATaGGAATTGATCTATTCCTATCTCCTTTTACTTAGGTCAAATCTA | + |
|
Preference number: 1 (lower is better) Translates to: STNGAGITGSYHGKV*ELIYSYLLLLRSNL Trigger: TAGATTTGACCTAAGTAAAAGGAGATAGGAATAGATCAATTCGCATACTTTTCCATGATAACTACCAGTTATGCCAGCACCATTTGTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 90 bp | AAAGAACCCAGATGTTCCTCAACAGAGGAATTTATACAGAAAAGGTaGTACATTTCACAATGGAGTACTACTCACCTATTAAAAAGAATG | + |
|
Preference number: 1 (lower is better) Translates to: KEPRCSSTEEFIQKR*YISQWSTTHLLKRM Trigger: CATTCTTTTTAATAGGTGAGTAGTACTCCATTGTGAAATGTACCACCTTTTCTGTATAAATTCCTCTGTTGAGGAACATCTGGGTTCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTGCCAACACCATCCCTaGTCAAGCTTGTTCACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VGLQACTTTLEISLAVPQCQHHP*SSLFTS Trigger: GGAGGTGAACAAGCTTGACCAGGGATGGTGTTGGCA...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCCATCCTTTCAACCTCCAAACACTGACACCATTGCATACACCAGCAAGAGGGAGGGTAGAGGAATaGAGGGAGGTTTGGGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: GIHPFNLQTLTPLHTPARGRVEE*REVWGT Trigger: AGTCCCCCAAACCTCCCTCCATTCCTCTACCCTCCC...TCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTTGAAAGGATGGATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTGGATCCAACATACTTaGCTTGTGTCTGTGGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VGLQACTTTLEISLAVPQWIQHT*LVSVGS Trigger: GCTGCCCACAGACACAAGGCAAGTATGTTGGATCCA...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGGAAGAGAGCCTCCTTaGTCCTGCAAACTTTATATG | + |
|
Preference number: 2 (lower is better) Translates to: VGLQACTTTLEISLAVPQGREPP*SCKLYM Trigger: CATATAAAGTTTGCAGGACCAAGGAGGCTCTCTTCC...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAATTCCTAGGCAAATaGATGGACTTCGAGGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: VGLQACTTTLEISLAVPQKFLGK*MDFEGI Trigger: GATGCCCTCGAAGTCCATCCATTTGCCTAGGAATTT...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGGAAGCATGTCACACTaGGCTTTTAAGATACCAACT | + |
|
Preference number: 2 (lower is better) Translates to: VGLQACTTTLEISLAVPQGSMSH*AFKIPT Trigger: AGTTGGTATCTTAAAAGCTCAGTGTGACATGCTTCC...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGATCCATCCTTTCAACCTCCAAACACTGACACCATTGCATACACCAGCAAGAGAGCCTCCTTGGTCCTaGAAACTTTATATGCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GIHPFNLQTLTPLHTPAREPPWS*KLYMPQ Trigger: CTGAGGCATATAAAGTTTGCAGGACCAAGGAGGCTC...TCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTTGAAAGGATGGATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGCAGAAGACCCACTTTaGATCTACATGATATCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VGLQACTTTLEISLAVPQAEDPL*IYMISK Trigger: CTTTGATATCATGTAGATTCAAAGTGGGTCTTCTGC...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGCTTTTTCAACATGCTTaGTTCTTGTACTTCTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: VGLQACTTTLEISLAVPQLFQHA*FLYFCQ Trigger: TTGGCAGAAGTACAAGAAGCAAGCATGTTGAAAAAG...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTCAGCAAGAGGGTCTTaGTTTAAATTTATGGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: VGLQACTTTLEISLAVPQSARGS*FKFMVG Trigger: TCCAACCATAAATTTAAAGCAAGACCCTCTTGCTGA...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGGAATGGAGGGAGGTTTaGGGGACTTTTGGGATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMEWREV*GTFGIA Trigger: TGCTATCCCAAAAGTCCCCCAAACCTCCCTCCATTC...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATTGGATCCAACATACTTaGCTTGTGTCTGTGGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENWIQHT*LVSVGS Trigger: GCTGCCCACAGACACAAGGCAAGTATGTTGGATCCA...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAGTTGGGAATCATGTaGCATTTTGTCCTTAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: VGLQACTTTLEISLAVPQKLGIM*HFVLKS Trigger: ACTTTTAAGGACAAAATGGCACATGATTCCCAACTT...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGTGCTTCTTGTACTTCTaGCAACACCATCCCTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMCFLYF*QHHPWS Trigger: TGACCAGGGATGGTGTTGGCAGAAGTACAAGAAGCA...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCCATCCTTTCAACCTCCAAACACTGACACCATTGCATACACCAGCAAGATTTATCATGCAGGAGTaGCTCAAAGCTAACAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GIHPFNLQTLTPLHTPARFIMQE*LKANSN Trigger: GTTACTGTTAGCTTTGAGCCACTCCTGCATGATAAA...TCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTTGAAAGGATGGATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGAGAAGATGGCCTAGTTaGCCATCATTGGGAAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMRRWPS*PSLGRE Trigger: CTCTCTTCCCAATGATGGCCAACTAGGCCATCTTCT...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 90 bp | GAATTGGGAACAAAACACACATGGAAGGAGTTACAGAGACAAAGTTaGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTTCCATACC | + |
|
Preference number: 2 (lower is better) Translates to: ELGTKHTWKELQRQS*ELRQKDGPSRDFHT Trigger: GGTATGGAAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGTGTGTTTTGTTCCCAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGGACAAAGTTTGGAACTaGGACGAAAGGATGGACCAT | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMDKVWN*DERMDH Trigger: ATGGTCCATCCTTTCGTCTCAGTTCCAAACTTTGTC...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGATCCAACATACTTGCCTTGTGTCTGTGGGCAGCAAACATGCATTTTGTTTCAGAAATACACATAGATaGAGCACACACACATCCGCT | + |
|
Preference number: 2 (lower is better) Translates to: WIQHTCLVSVGSKHAFCFRNTHR*STHTSA Trigger: AGCGGATGTGTGTGTGCTGCATCTATGTGTATTTCT...GAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGAATATTCAGGCTTGGTaGTTGAAGGGCCTGATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMNIQAW*LKGLIA Trigger: AGCAATCAGGCCCTTCAAGCACCAAGCCTGAATATT...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGATCCATCCTTTCAACCTCCAAACACTGACACCATTGCATACACCAGCAAGACTTTTTCAACATGCTTaGTTCTTGTACTTCTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GIHPFNLQTLTPLHTPARLFQHA*FLYFCQ Trigger: TTGGCAGAAGTACAAGAAGCAAGCATGTTGAAAAAG...TCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTTGAAAGGATGGATCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTGAGCCTCCTTGGTCCTaGAAACTTTATATGCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RIGNKTPMEGVTETKFGTEPPWS*KLYMPQ Trigger: CTGAGGCATATAAAGTTTGCAGGACCAAGGAGGCTC...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGGGAAGAGAGCCTCCTTaGTCCTGCAAACTTTATATG | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMGREPP*SCKLYM Trigger: CATATAAAGTTTGCAGGACCAAGGAGGCTCTCTTCC...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATAGAAGATGGCCTAGTTaGCCATCATTGGGAAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENRRWPS*PSLGRE Trigger: CTCTCTTCCCAATGATGGCCAACTAGGCCATCTTCT...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGCAGGGGAAAAATTCCTaGATAGAACAGCAATGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMQGKNS*IEQQWL Trigger: AAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTG...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTAATATTCAGGCTTGGTaGTTGAAGGGCCTGATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RIGNKTPMEGVTETKFGTNIQAW*LKGLIA Trigger: AGCAATCAGGCCCTTCAAGCACCAAGCCTGAATATT...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGCATTTTTGGTGGGATTaGAAGCTTGTACAACCACTC | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMHFWWD*KLVQPL Trigger: GAGTGGTTGTACAAGCTTGCAATCCCACCAAAAATG...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGATCCAACATACTTGCCTTGTGTCTGTGGGCAGCAAACATGCATTTTGTTTCTTTATCATGCAGGAGTaGCTCAAAGCTAACAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: WIQHTCLVSVGSKHAFCFFIMQE*LKANSN Trigger: GTTACTGTTAGCTTTGAGCCACTCCTGCATGATAAA...GAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGCAAAATATTCAGGCTTaGTGCTTGAAGGGCCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMQNIQA*CLKGLI Trigger: AATCAGGCCCTTCAAGCACCAAGCCTGAATATTTTG...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGATAATAGCCAGAAGCTaGAAAGAACCCAGATGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMIIARS*KEPRCS Trigger: GGAACATCTGGGTTCTTTCCAGCTTCTGGCTATTAT...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATAAAGCCTCGAAGATATaGGCACAGGGGAAAAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENKASKI*AQGKNS Trigger: GGAATTTTTCCCCTGTGCCCATATCTTCGAGGCTTT...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 90 bp | ACATACAGCCATATACAGATCTATCATACTGCTTTTTCAACATGCTaGCTTCTTGTACTTCTGCCAACACCATCCCTGGTCAAGCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TYSHIQIYHTAFSTC*LLVLLPTPSLVKLV Trigger: AACAAGCTTGACCAGGGATGGTGTTGGCAGAAGTACAAGAAGCAAGCATGTTGAAAAAGCAGTATGATAGATCTGTATATGGCTGTATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGGCAGAAGACCCACTTTaGATCTACATGATATCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMAEDPL*IYMISK Trigger: CTTTGATATCATGTAGATTCAAAGTGGGTCTTCTGC...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATGGAAGCATGTCACACTaGGCTTTTAAGATACCAACT | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENGSMSH*AFKIPT Trigger: AGTTGGTATCTTAAAAGCTCAGTGTGACATGCTTCC...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGCCAGCAAGATTTTTCTaGAAGATCCCTGATATAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMPARFF*KIPDIV Trigger: GACTATATCAGGGATCTTTCAGAAAAATCTTGCTGG...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATCAGGGGAAAAATTCCTaGATAGAACAGCAATGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENQGKNS*IEQQWL Trigger: AAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTG...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGTGTGGGCAGCAAACATaGATTTTGTTTCCCTATATG | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMCGQQT*ILFPYM Trigger: CATATAGGGAAACAAAATGCATGTTTGCTGCCCACA...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATCATTTTTGGTGGGATTaGAAGCTTGTACAACCACTC | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENHFWWD*KLVQPL Trigger: GAGTGGTTGTACAAGCTTGCAATCCCACCAAAAATG...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATCAAAATATTCAGGCTTaGTGCTTGAAGGGCCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENQNIQA*CLKGLI Trigger: AATCAGGCCCTTCAAGCACCAAGCCTGAATATTTTG...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 90 bp | AATAAACAACAGATGAGAATTCTAGTTCCAGTGGATCCAACATACTaGCCTTGTGTCTGTGGGCAGCAAACATGCATTTTGTTTCCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: NKQQMRILVPVDPTY*PCVCGQQTCILFPY Trigger: ATAGGGAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCACTGGAACTAGAATTCTCATCTGTTGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTTCAGAGAAATTCAACTaGTTGCAGAAGACCCACTTT | + |
|
Preference number: 2 (lower is better) Translates to: RIGNKTPMEGVTETKFGTSEKFN*LQKTHF Trigger: AAAGTGGGTCTTCTGCAATCAGTTGAATTTCTCTGA...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATCCAGCAAGATTTTTCTaGAAGATCCCTGATATAGTC | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENPARFF*KIPDIV Trigger: GACTATATCAGGGATCTTTCAGAAAAATCTTGCTGG...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATTCATCTGTGGCATACTaGATAGCTAAGAAGCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENSSVAY*IAKKQL Trigger: AAGTTGCTTCTTAGCTATTCAGTATGCCACAGATGA...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGATCCAACATACTTGCCTTGTGTCTGTGGGCAGCAAACATGCATTTTGTTTCGATTTATTTTTATCATaGAGGAGTGGCTCAAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: WIQHTCLVSVGSKHAFCFDLFLS*RSGSKL Trigger: TAGCTTTGAGCCACTCCTGCATGATAAAAATAAATC...GAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTATATATAGCAGAAGATaGCCTAGTTGGCCATCATTG | + |
|
Preference number: 2 (lower is better) Translates to: RIGNKTPMEGVTETKFGTIYSRR*PSWPSL Trigger: CAATGATGGCCAACTAGGCCATCTTCTGCTATATAT...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGAGCAATACCACTCTTTaGCATATATCCAGAAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TTPDLKLYYTAIVINNGMSNTTL*HISRSC Trigger: ACAACTTCTGGATATATGCCAAAGAGTGGTATTGCT...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATAGCAATACCACTCTTTaGCATATATCCAGAAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENSNTTL*HISRSC Trigger: ACAACTTCTGGATATATGCCAAAGAGTGGTATTGCT...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATAAGAACTCCAGAAGATaGACTCCAGAAAATCAAATC | + |
|
Preference number: 2 (lower is better) Translates to: KMERSPMLMDWQDQYSENKNSRR*TPENQI Trigger: GATTTGATTTTCTGGAGTCCATCTTCTGGAGTTCTT...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTGATTTATTTTTATCATaGAGGAGTGGCTCAAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RIGNKTPMEGVTETKFGTDLFLS*RSGSKL Trigger: TAGCTTTGAGCCACTCCTGCATGATAAAAATAAATC...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTAGAAATTCAACTGATTaGAGAAGACCCACTTTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: RIGNKTPMEGVTETKFGTRNSTD*RRPTLN Trigger: ATTCAAAGTGGGTCTTCTGCAATCAGTTGAATTTCT...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTAAGTTGGGAATCATGTaGCATTTTGTCCTTAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RIGNKTPMEGVTETKFGTKLGIM*HFVLKS Trigger: ACTTTTAAGGACAAAATGGCACATGATTCCCAACTT...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTACAGATCTATCATACTaGTTTTTCAACATGCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RIGNKTPMEGVTETKFGTTDLSY*FFNMLA Trigger: AGCAAGCATGTTGAAAAAGCAGTATGATAGATCTGT...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTGGTTGGAAAATAAGATaGCATTATCTCTATTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RIGNKTPMEGVTETKFGTGWKIR*HYLYCV Trigger: CACACAATAGAGATAATGCCATCTTATTTTCCAACC...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 90 bp | AATGGTGCTGGCATAACTGGTAGTTATCATGGAAAAGTATGCGAATaGATCTATTCCTATCTCCTTTTACTTAGGTCAAATCTAAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: NGAGITGSYHGKVCE*IYSYLLLLRSNLSG Trigger: TCCACTTAGATTTGACCTAAGTAAAAGGAGATAGGAATAGATCAATTCGCATACTTTTCCATGATAACTACCAGTTATGCCAGCACCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | TGGGAAGAGAGCCTCCTTGGTCCTGCAAACTTTATATaGCTCAGGAAGGGGGAAAGCCAGGGCCAAGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: WEESLLGPANFI*LRKGESQGQEL Trigger: CAATTCTTGGCCCTGGCTTTCCCCCTTCCTGAGGCATATAAAGTTTGCAGGACCAAGGAGGCTCTCTTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGATTCAGGCTTGGTGCTaGAAGGGCCTGATTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VGLQACTTTLEISLAVPQIQAWC*KGLIAL Trigger: AAGAGCAATCAGGCCCTTCAAGCACCAAGCCTGAAT...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGATCCATCCTTTCAACCTCCAAACACTGACACCATTGCATACACCAGCAAGAGGAATGGAGGGAGGTTaGGGGGACTTTTGGGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: GIHPFNLQTLTPLHTPARGMEGG*GDFWDS Trigger: GCTATCCCAAAAGTCCCCCAAACCTCCCTCCATTCC...TCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTTGAAAGGATGGATCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | AGTTGGCCATCATTGGGAAGAGAGCCTCCTTGGTCCTaGAAACTTTATATGCCTCAGGAAGGGGGAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SWPSLGREPPWS*KLYMPQEGGKP Trigger: TGGCTTTCCCCCTTCCTGAGGCATATAAAGTTTGCAGGACCAAGGAGGCTCTCTTCCCAATGATGGCCAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 72 bp | ATCTCTAGCTGCATATATAGCAGAAGATGGCCTAGTTaGCCATCATTGGGAAGAGAGCCTCCTTGGTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ISSCIYSRRWPS*PSLGREPPWSC Trigger: GCAGGACCAAGGAGGCTCTCTTCCCAATGATGGCCAACTAGGCCATCTTCTGCTATATATGCAGCTAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGATCCATCCTTTCAACCTCCAAACACTGACACCATTGCATACACCAGCAAGATCCAACATACTTGCCTaGTGTCTGTGGGCAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GIHPFNLQTLTPLHTPARSNILA*CLWAAN Trigger: GTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGA...TCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTTGAAAGGATGGATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | GAACTACCCAGTACCCCTGGAGCTCATATCTCTAGCTaGATATATAGCAGAAGATGGCCTAGTTGGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: ELPSTPGAHISS*IYSRRWPSWPS Trigger: TGATGGCCAACTAGGCCATCTTCTGCTATATATGCAGCTAGAGATATGAGCTCCAGGGGTACTGGGTAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 72 bp | GGAGCTCATATCTCTAGCTGCATATATAGCAGAAGATaGCCTAGTTGGCCATCATTGGGAAGAGAGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GAHISSCIYSRR*PSWPSLGREPP Trigger: AGGAGGCTCTCTTCCCAATGATGGCCAACTAGGCCATCTTCTGCTATATATGCAGCTAGAGATATGAGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGCATATATCCAGAAGTaGTTCCAACTGGTAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VGLQACTTTLEISLAVPQAYIQK*FQLVRR Trigger: CCTTCTTACCAGTTGGAACAACTTCTGGATATATGC...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATGCTCACAGTCAGCTATaGGATGGAACACAGGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KMERSPMLMDWQDQYSENAHSQL*DGTQVP Trigger: GGGGACCTGTGTTCCATCCAATAGCTGACTGTGAGC...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTTACAGAGACAAAGTTaGGAACTGAGACGAAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VGLQACTTTLEISLAVPQLQRQS*ELRRKD Trigger: ATCCTTTCGTCTCAGTTCCAAACTTTGTCTCTGTAA...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGCAGCAAACATGCATTTaGTTTCCCTATATGCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: VGLQACTTTLEISLAVPQQQTCI*FPYMHL Trigger: TAGATGCATATAGGGAAACAAAATGCATGTTTGCTG...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTGCAGAAGACCCACTTaGAATCTACATGATATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGLQACTTTLEISLAVPQCRRPT*NLHDIK Trigger: TTTGATATCATGTAGATTCAAAGTGGGTCTTCTGCA...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 72 bp | CATACCCGGGGATCCATCCTTTCAACCTCCAAACACTaGCACCATTGCATACACCAGCAAGATTTTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HTRGSILSTSKH*HHCIHQQDFSE Trigger: TTCAGAAAAATCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTTGAAAGGATGGATCCCCGGGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | ATACTGCTTTTTCAACATGCTTGCTTCTTGTACTTCTaGCAACACCATCCCTGGTCAAGCTTGTTCACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ILLFQHACFLYF*QHHPWSSLFTS Trigger: GGAGGTGAACAAGCTTGACCAGGGATGGTGTTGGCAGAAGTACAAGAAGCAAGCATGTTGAAAAAGCAGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTATTCAGGCTTGGTGCTaGAAGGGCCTGATTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RIGNKTPMEGVTETKFGTIQAWC*KGLIAL Trigger: AAGAGCAATCAGGCCCTTCAAGCACCAAGCCTGAAT...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATTCCAACATACTTGCCTaGTGTCTGTGGGCAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KMERSPMLMDWQDQYSENSNILA*CLWAAN Trigger: GTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGA...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 72 bp | ACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTaGGACGAAAGGATGGACCATCTAGTGACTGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: THGRSYRDKVWN*DERMDHLVTVI Trigger: TATGACAGTCACTAGATGGTCCATCCTTTCGTCTCAGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 72 bp | CTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGTaGGAAGCTGGAAGCAATCCCACTAAAATCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LQQTSSQHQSKW*EAGSNPTKIRD Trigger: GTCCCTGATTTTAGTGGGATTGCTTCCAGCTTCTCACCATTTACTTTGATGTTGGCTACTGGTTTGCTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 72 bp | ATGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAGGGACCCTGATATAGCTGTCTCTTGTGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: MLTPLHTLARFC*RDPDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCAGGGTCCCTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 72 bp | ATTGCATACACCAGCAAGATTTTTCTGAAAGATCCCTaGTATAGTCTCTTTGAGGCTATGCCGTGTCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: IAYTSKIFLKDP*YSLFEAMPCPS Trigger: GCTAGGACACGGCATAGCCTCAAAGAGACTATATCAGGGATCTTTCAGAAAAATCTTGCTGGTGTATGCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 72 bp | CTGCCCACTTTTTCCCTATCTATTCAACATTGTACTTaGAGCCCTACCCAGAGCAATTCGACAACAAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPTFSLSIQHCT*SPTQSNSTTKG Trigger: TCCTTTTGTTGTCGAATTGCTCTGGGTAGGGCTTCAAGTACAATGTTGAATAGATAGGGAAAAAGTGGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 72 bp | ACACATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGACAAAAGGATGGACCATCTAGAGACTTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: THGRSYRDKVWS*DKRMDHLETSI Trigger: TATGGAAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | CCAACATACTTGCCTTGTGTCTGTGGGCAGCAAACATaGATTTTGTTTCCCTATATGCATCTAGGTACACAT | + |
|
Preference number: 3 (lower is better) Translates to: PTYLPCVCGQQT*ILFPYMHLGTH Trigger: ATGTGTACCTAGATGCATATAGGGAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 72 bp | GAAGATCGTAGAAGATGGAAAGATCTCCCATGCTCATaGATTGGCAGGACCAATATAGTGAAAATGGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: EDRRRWKDLPCS*IGRTNIVKMAI Trigger: GATAGCCATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTTCTACGATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGATCCAACATACTTGCCTTGTGTCTGTGGGCAGCAAACATGCATTTTGTTTCAAGACTGACCAGATATaGTGCATATGTTGTACACAG | + |
|
Preference number: 3 (lower is better) Translates to: WIQHTCLVSVGSKHAFCFKTDQI*CICCTQ Trigger: CTGTGTACAACATATGCACAATATCTGGTCAGTCTT...GAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGAACACTTCTCCATTTTaGGTGGGATTGCAAGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TTPDLKLYYTAIVINNGMNTSPF*VGLQAC Trigger: ACAAGCTTGCAATCCCACCAAAAATGGAGAAGTGTT...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 72 bp | ACACTGACACCATTGCATACACCAGCAAGATTTTTCTaGAAGATCCCTGATATAGTCTCTTTGAGGCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: TLTPLHTPARFF*KIPDIVSLRLC Trigger: GCATAGCCTCAAAGAGACTATATCAGGGATCTTTCAGAAAAATCTTGCTGGTGTATGCAATGGTGTCAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | TCAAAATATTCAGGCTTGGTGCTTGAAGGGCCTGATTaGTCTTCCACACGTCCCAGGATTTATTTTTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: SKYSGLVLEGPD*SSTRPRIYFYH Trigger: ATGATAAAAATAAATCCTGGGACGTGTGGAAGAGCAATCAGGCCCTTCAAGCACCAAGCCTGAATATTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | GAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTaGCCACTTTTTCCCTATCTATTCAACATTGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: EAIPLKSGTRQG*PLFPYLFNIVL Trigger: AAGTACAATGTTGAATAGATAGGGAAAAAGTGGGCAGCCTTGTCTAGTCCCTGATTTTAGTGGGATTGCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 72 bp | TCTCTGAAGAAAGAAATTAAAGAAGATCGTAGAAGATaGAAAGATCTCCCATGCTCATGGATTGGCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SLKKEIKEDRRR*KDLPCSWIGRT Trigger: GGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTTCTACGATCTTCTTTAATTTCTTTCTTCAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGAAGACTGACCAGATATaGTGCATATGTTGTACACAG | + |
|
Preference number: 3 (lower is better) Translates to: TTPDLKLYYTAIVINNGMKTDQI*CICCTQ Trigger: CTGTGTACAACATATGCACAATATCTGGTCAGTCTT...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATGCTTTTTCAACATGCTaGCTTCTTGTACTTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KMERSPMLMDWQDQYSENAFSTC*LLVLLP Trigger: TGGCAGAAGTACAAGAAGCAAGCATGTTGAAAAAGC...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGTTACAGAGACAAAGTTaGGAACTGAGACGAAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TTPDLKLYYTAIVINNGMLQRQS*ELRRKD Trigger: ATCCTTTCGTCTCAGTTCCAAACTTTGTCTCTGTAA...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATTGGGACCTCATAAAATaGCAAAGCTTCTGTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KMERSPMLMDWQDQYSENWDLIK*QSFCKA Trigger: TGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCA...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 72 bp | ATGTTCGTAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGTTCCTCAACAGAGGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: MFVAALFIIARS*KEPRCSSTEEF Trigger: AAATTCCTCTGTTGAGGAACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTACGAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 72 bp | AGAACAGCAATGGCTTGTGCTATAAGAATCGACAAATaGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RTAMACAIRIDK*DLIKLQSFCKA Trigger: TGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTTATAGCACAAGCCATTGCTGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 72 bp | TATGTTTGGGAGGTTACATTTCAGTGTGATTGCCAGTaGCCAGAGGCTTGTCATCTCCTATTGTTTAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: YVWEVTFQCDCQ*PEACHLLLFNF Trigger: AAAATTAAACAATAGGAGATGACAAGCCTCTGGCCACTGGCAATCACACTGAAATGTAACCTCCCAAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | CACTCAAACATACAGCCATATACAGATCTATCATACTaGTTTTTCAACATGCTTGCTTCTTGTACTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HSNIQPYTDLSY*FFNMLASCTSA Trigger: GGCAGAAGTACAAGAAGCAAGCATGTTGAAAAAGCAGTATGATAGATCTGTATATGGCTGTATGTTTGAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | GGTGCTGGCATAACTGGTAGTTATCATGGAAAAGTATaGGAATTGATCTATTCCTATCTCCTTTTACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GAGITGSYHGKV*ELIYSYLLLLR Trigger: CCTAAGTAAAAGGAGATAGGAATAGATCAATTCGCATACTTTTCCATGATAACTACCAGTTATGCCAGCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR GCA 72 bp | ATTAAAGAAGATCGTAGAAGATGGAAAGATCTCCCATaGTCATGGATTGGCAGGACCAATATAGTGAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: IKEDRRRWKDLP*SWIGRTNIVKM Trigger: CATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTTCTACGATCTTCTTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 72 bp | AGGTTTCATCCCAGGGATGCAGGATGGTTCAATATATaGAAATCCATCAACGTAATCCACTATATAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RFHPRDAGWFNI*KSINVIHYINK Trigger: TTTGTTTATATAGTGGATTACGTTGATGGATTTCCATATATTGAACCATCCTGCATCCCTGGGATGAAACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CCA 72 bp | AGATGTTCCTCAACAGAGGAATTTATACAGAAAAGGTaGTACATTTCACAATGGAGTACTACTCACCTATTA | + |
|
Preference number: 3 (lower is better) Translates to: RCSSTEEFIQKR*YISQWSTTHLL Trigger: TAATAGGTGAGTAGTACTCCATTGTGAAATGTACCACCTTTTCTGTATAAATTCCTCTGTTGAGGAACATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR TCA 72 bp | AATACCCAAGATACAAGATACAATCGGCAAAACACATaGAACTCAAGAAGAATGAAGTCCAAAATGTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: NTQDTRYNRQNT*NSRRMKSKMLT Trigger: TGTCAACATTTTGGACTTCATTCTTCTTGAGTTTCATGTGTTTTGCCGATTGTATCTTGTATCTTGGGTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTATGCACAAGCCAACTaGCTGAACAGGAAGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGLQACTTTLEISLAVPQYAQAN*LNRKDQ Trigger: TTGGTCCTTCCTGTTCAGTCAGTTGGCTTGTGCATA...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGCTGATTGTGATTGCTTaGAAGCAACTCAGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGLQACTTTLEISLAVPQLIVIA*KQLSRH Trigger: GTGCCTACTGAGTTGCTTTCAAGCAATCACAATCAG...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | CCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATaGGACATAGTACTACTGGAGGACCCAGCAATACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLWKSVWRFLRK*DIVLLEDPAIP Trigger: TGGTATTGCTGGGTCCTCCAGTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | GAGGAACACTTCTCCATTTTTGGTGGGATTGCAAGCTaGTACAACCACTCTGGAAATCAGTCTGGCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEHFSIFGGIAS*YNHSGNQSGGS Trigger: GGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAAAAATGGAGAAGTGTTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTGGGCTTCATATTGCTaGGAAGAACAAAGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGLQACTTTLEISLAVPQWASYC*EEQRDK Trigger: TTTGTCCCTTTGTTCTTCTCAGCAATATGAAGCCCA...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGTGCAGTTGCAAAATTaGCTGATGAAAACCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGLQACTTTLEISLAVPQVQLQN*LMKTMS Trigger: GCTCATGGTTTTCATCAGGCAATTTTGCAACTGCAC...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR TCA 90 bp | TGGATCCAACATACTTGCCTTGTGTCTGTGGGCAGCAAACATGCATTTTGTTTCTATGCACAAGCCAACTaGCTGAACAGGAAGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: WIQHTCLVSVGSKHAFCFYAQAN*LNRKDQ Trigger: TTGGTCCTTCCTGTTCAGTCAGTTGGCTTGTGCATA...GAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | GTGAGGATGTGGAGAAAGAGGAACACTTCTCCATTTTaGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRMWRKRNTSPF*VGLQACTTTLE Trigger: TTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAAAAATGGAGAAGTGTTCCTCTTTCTCCACATCCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | GAGAATTCTAGTTCCAGTGGATCCAACATACTTGCCTaGTGTCTGTGGGCAGCAAACATGCATTTTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ENSSSSGSNILA*CLWAANMHFVS Trigger: GGAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCACTGGAACTAGAATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | CAGATGAGAATTCTAGTTCCAGTGGATCCAACATACTaGCCTTGTGTCTGTGGGCAGCAAACATGCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QMRILVPVDPTY*PCVCGQQTCIL Trigger: CAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCACTGGAACTAGAATTCTCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | TTCTTGTACTTCTGCCAACACCATCCCTGGTCAAGCTaGTTCACCTCCCCATATACTACAAAGACATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLYFCQHHPWSS*FTSPYTTKTCS Trigger: ACTACATGTCTTTGTAGTATATGGGGAGGTGAACAAGCTTGACCAGGGATGGTGTTGGCAGAAGTACAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | ACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTaGGAACTGAGACGAAAGGATGGACCATCTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TKHPWKELQRQS*ELRRKDGPSSD Trigger: GTCACTAGATGGTCCATCCTTTCGTCTCAGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | TGGAGAAAGAGGAACACTTCTCCATTTTTGGTGGGATaGCAAGCTTGTACAACCACTCTGGAAATCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRKRNTSPFLVG*QACTTTLEISL Trigger: CAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAAAAATGGAGAAGTGTTCCTCTTTCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | GCTGCCCACTTTTTCCCTATCTATTCAACATTGTACTaGAAGCCCTACCCAGAGCAATTCGACAACAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAHFFPIYSTLY*KPYPEQFDNKR Trigger: CCTTTTGTTGTCGAATTGCTCTGGGTAGGGCTTCAAGTACAATGTTGAATAGATAGGGAAAAAGTGGGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR TCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGCTGATTGTGATTGCTTaGAAGCAACTCAGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTPDLKLYYTAIVINNGMLIVIA*KQLSRH Trigger: GTGCCTACTGAGTTGCTTTCAAGCAATCACAATCAG...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR GCA 90 bp | TGGATCCAACATACTTGCCTTGTGTCTGTGGGCAGCAAACATGCATTTTGTTTCGTGCAGTTGCAAAATTaGCTGATGAAAACCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WIQHTCLVSVGSKHAFCFVQLQN*LMKTMS Trigger: GCTCATGGTTTTCATCAGGCAATTTTGCAACTGCAC...GAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | TACTTGCCTTGTGTCTGTGGGCAGCAAACATGCATTTaGTTTCCCTATATGCATCTAGGTACACATACACAC | + |
|
Preference number: 4 (lower is better) Translates to: YLPCVCGQQTCI*FPYMHLGTHTH Trigger: GTGTGTATGTGTACCTAGATGCATATAGGGAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGAGGGTAAAAACAGCCTaGAAATGGGCTTCATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTPDLKLYYTAIVINNGMRVKTA*KWASYC Trigger: GCAATATGAAGCCCATTTCCAGGCTGTTTTTACCCT...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | CATATACAGATCTATCATACTGCTTTTTCAACATGCTaGCTTCTTGTACTTCTGCCAACACCATCCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HIQIYHTAFSTC*LLVLLPTPSLV Trigger: GACCAGGGATGGTGTTGGCAGAAGTACAAGAAGCAAGCATGTTGAAAAAGCAGTATGATAGATCTGTATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR GCA 90 bp | TGGATCCAACATACTTGCCTTGTGTCTGTGGGCAGCAAACATGCATTTTGTTTCATAGTATTGAAGAATTaGCAAGCATTCCCACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WIQHTCLVSVGSKHAFCFIVLKN*QAFPLS Trigger: TGACAGTGGGAATGCTTGGCAATTCTTCAATACTAT...GAAACAAAATGCATGTTTGCTGCCCACAGACACAAGGCAAGTATGTTGGATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATAGGGTAAAAACAGCCTaGAAATGGGCTTCATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KMERSPMLMDWQDQYSENRVKTA*KWASYC Trigger: GCAATATGAAGCCCATTTCCAGGCTGTTTTTACCCT...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR GCA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGATAGTATTGAAGAATTaGCAAGCATTCCCACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTPDLKLYYTAIVINNGMIVLKN*QAFPLS Trigger: TGACAGTGGGAATGCTTGGCAATTCTTCAATACTAT...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | GAAGATCCAGAAATGAACCCAAACACCTATGGTCAATaGATCTTTGAAAAGGGAGCTAAAAACATCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDPEMNPNTYGQ*IFEKGAKNIQW Trigger: CCACTGGATGTTTTTAGCTCCCTTTTCAAAGATCAATTGACCATAGGTGTTTGGGTTCATTTCTGGATCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| 3UTR CAA 72 bp | GGCATAACTGGTAGTTATCATGGAAAAGTATGCGAATaGATCTATTCCTATCTCCTTTTACTTAGGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GITGSYHGKVCE*IYSYLLLLRSN Trigger: ATTTGACCTAAGTAAAAGGAGATAGGAATAGATCAATTCGCATACTTTTCCATGATAACTACCAGTTATGCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAATAGTATTGAAGAATaGCCAAGCATTCCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGLQACTTTLEISLAVPQNSIEE*PSIPTV Trigger: GACAGTGGGAATGCTTGGCAATTCTTCAATACTATT...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGATAAATATGTCTCACTaGTCTCTTGTGTCTGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGLQACTTTLEISLAVPQINMSH*SLVSVE Trigger: CTCTACAGACACAAGAGACAAGTGAGACATATTTAT...CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS GCA 90 bp | CTGGGGCCTAACACTCTTGCTGGAGTCAAGATGTTTAGAAAAATATaGACAAGCCAACTGACTGAACAGGAAGGACCAATGTACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGPNTLAGVKMFRKI*TSQLTEQEGPMYLM Trigger: CATCAAGTACATTGGTCCTTCCTGTTCAGTCAGTTGGCTTGTGCATATTTTTCTAAACATCTTGACTCCAGCAAGAGTGTTAGGCCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053134.4 ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCCATCCTTTCAACCTCCAAACACTGACACCATTGCATACACCAGCAAGATCTATAATCAGGTCTTaGGGCATTAAATTCTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GIHPFNLQTLTPLHTPARSIIRS*GIKFFP Trigger: CGGAAAGAATTTAATGCCCAAAGACCTGATTATAGA...TCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTTGAAAGGATGGATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCCATCCTTTCAACCTCCAAACACTGACACCATTGCATACACCAGCAAGAATAAATATGTCTCACTaGTCTCTTGTGTCTGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GIHPFNLQTLTPLHTPARINMSH*SLVSVE Trigger: CTCTACAGACACAAGAGACAAGTGAGACATATTTAT...TCTTGCTGGTGTATGCAATGGTGTCAGTGTTTGGAGGTTGAAAGGATGGATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGGAAATGGGCTTCATATaGCTGAGAAGAACAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTPDLKLYYTAIVINNGMEMGFI*LRRTKG Trigger: TCCCTTTGTTCTTCTCAGCAATATGAAGCCCATTTC...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | ACCACACCTGACCTAAAGCTGTACTACACAGCAATTGTGATAAATAACGGCATGGTACTTGATGACTCTTaGTTTAAGCATCAGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTPDLKLYYTAIVINNGMVLDDS*FKHQPF Trigger: AAAGGGCTGATGCTTAAACAAAGAGTCATCAAGTAC...CATGCCGTTATTTATCACAATTGCTGTGTAGTACAGCTTTAGGTCAGGTGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATGAAATGGGCTTCATATaGCTGAGAAGAACAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KMERSPMLMDWQDQYSENEMGFI*LRRTKG Trigger: TCCCTTTGTTCTTCTCAGCAATATGAAGCCCATTTC...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATAATAGTATTGAAGAATaGCCAAGCATTCCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KMERSPMLMDWQDQYSENNSIEE*PSIPTV Trigger: GACAGTGGGAATGCTTGGCAATTCTTCAATACTATT...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAATATAGTGAAAATGAAGGACCAATGTACTaGATGACTCTTTGTTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KMERSPMLMDWQDQYSENEGPMY*MTLCLS Trigger: GCTTAAACAAAGAGTCATCAAGTACATTGGTCCTTC...ATTTTCACTATATTGGTCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTTCTATAATCAGGTCTTaGGGCATTAAATTCTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RIGNKTPMEGVTETKFGTSIIRS*GIKFFP Trigger: CGGAAAGAATTTAATGCCCAAAGACCTGATTATAGA...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS-3UTR CAA 90 bp | AGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAACTAAAGGGACACCCCTCTaGTTATTCTGTAAATATACA | + |
|
Preference number: 5 (lower is better) Translates to: RIGNKTPMEGVTETKFGTKGTPL*LFCKYT Trigger: TGTATATTTACAGAATAACAAGAGGGGTGTCCCTTT...AGTTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS TCA 90 bp | TGGATATTTGGAGTAGGTTGTAAAGATGACCACAATAGAAGAGAATaGGTAAGAGATGATAAATGTGAACACCAGGATGAGGATTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WIFGVGCKDDHNRRE*VRDDKCEHQDEDCL Trigger: CAAACAATCCTCATCCTGGTGTTCACATTTATCATCTCTTACTCATTCTCTTCTATTGTGGTCATCTTTACAACCTACTCCAAATATCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053134.4 ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS GCA 72 bp | AACACTCTTGCTGGAGTCAAGATGTTTAGAAAAATATaGACAAGCCAACTGACTGAACAGGAAGGACCAATG | + |
|
Preference number: 6 (lower is better) Translates to: NTLAGVKMFRKI*TSQLTEQEGPM Trigger: CATTGGTCCTTCCTGTTCAGTCAGTTGGCTTGTGCATATTTTTCTAAACATCTTGACTCCAGCAAGAGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053134.4 ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS GCA 72 bp | AGCATAGTAAGAACATATAGAGTGCAGTTGCAAAATTaGCTGATGAAAACCATGAGCAGTAGGCATAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SIVRTYRVQLQN*LMKTMSSRHSS Trigger: TGAGCTATGCCTACTGCTCATGGTTTTCATCAGGCAATTTTGCAACTGCACTCTATATGTTCTTACTATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053134.4 ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS GCA 72 bp | CTTGAGATGATAGACAAGCAGTTGGCAAAGGTCAAGTaGTCTATAATCAGGTCTTTGGGCATTAAATTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LEMIDKQLAKVK*SIIRSLGIKFF Trigger: AAAGAATTTAATGCCCAAAGACCTGATTATAGAGCACTTGACCTTTGCCAACTGCTTGTCTATCATCTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053134.4 ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS CAA 72 bp | TTCCGGTGGACATCAAAATCACATAATAAAATAGTATaGAAGAATTGCCAAGCATTCCCACTGTCATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FRWTSKSHNKIV*KNCQAFPLSSG Trigger: CCCAGATGACAGTGGGAATGCTTGGCAATTCTTCAATACTATTTTATTATGTGATTTTGATGTCCACCGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053134.4 ENSMUST00000209638.3 ENSMUST00000227010.2 |
||
| CDS CCA 72 bp | AGTATTGAAGAATTGCCAAGCATTCCCACTGTCATCTaGGAGAATAGAAAAATTCCCATTGCAACATTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SIEELPSIPTVI*ENRKIPIATFS Trigger: TGAAAATGTTGCAATGGGAATTTTTCTATTCTCCCAGATGACAGTGGGAATGCTTGGCAATTCTTCAATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053134.4 ENSMUST00000209638.3 ENSMUST00000227010.2 |
||