Pregenerated sensors for VMN1R70 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045340Ensembl transcript IDs: ENSMUST00000055847.4, ENSMUST00000226255.2, ENSMUST00000228090.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTAGGGGAAGAGGGCGAGAGCAGAGGCATCAGGCCAGAGTTCCTGTaGTCTGGGCAGGCAGATGCAGGAGGACTGCCTGCTGCTTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: VGEEGESRGIRPEFL*SGQADAGGLPAAFH Trigger: GTGGAAAGCAGCAGGCAGTCCTCCTGCATCTGCCTGCCCAGAGCACAGGAACTCTGGCCTGATGCCTCTGCTCTCGCCCTCTTCCCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR CCA 90 bp | GGAAGAGGGCGAGAGCAGAGGCATCAGGCCAGAGTTCCTGTGCTCTaGGCAGGCAGATGCAGGAGGACTGCCTGCTGCTTTCCACACAGC | + |
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Preference number: 1 (lower is better) Translates to: GRGREQRHQARVPVL*AGRCRRTACCFPHS Trigger: GCTGTGTGGAAAGCAGCAGGCAGTCCTCCTGCATCTGCCTGCCCAGAGCACAGGAACTCTGGCCTGATGCCTCTGCTCTCGCCCTCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR CCA 90 bp | GAAAGGCAGGGGGAAGGAGAGAAAGTAGGAGAGAGAGACCAGCCCTaGCCAAGAGGAAAGATGGAAGGGAAAGAGAGAAAGAGAGAGAGT | + |
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Preference number: 1 (lower is better) Translates to: ERQGEGEKVGERDQP*PRGKMEGKERKRES Trigger: ACTCTCTCTCTTTCTCTCTTTCCCTTCCATCTTTCCTCTTGGCCAGGGCTGGTCTCTCTCTCCTACTTTCTCTCCTTCCCCCTGCCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR TCA 90 bp | AGAGAGAAGGAGCTAGAGAGTAAGAAATATGAAAGCTTAAGAGAGTaGGGAGGGAACAAGCAGCCCCTCTTATTGTGGGCTGTGTTATCT | + |
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Preference number: 1 (lower is better) Translates to: REKELESKKYESLRE*GGNKQPLLLWAVLS Trigger: AGATAACACAGCCCACAATAAGAGGGGCTGCTTGTTCCCTCCTCACTCTCTTAAGCTTTCATATTTCTTACTCTCTAGCTCCTTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCTGGCTGTGTGAAGCCGGTGACCCCACACGGAGTTGGGTGGACAAGGGGCTGTAGGAGTCTAGCCTaGAGGTTAGAAGCTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: ASGCVKPVTPHGVGWTRGCRSLA*RLEAWD Trigger: ATCCCAAGCTTCTAACCTTCAGGCTAGACTCCTACA...GCCCCTTGTCCACCCAACTCCGTGTGGGGTCACCGGCTTCACACAGCCAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCTGGCTGTGTGAAGCCGGTGACCCCACACGGAGTTGGGTGGACAAGGGGCCACAGTAAGGTCTTCTaGAGGGAGGTTAGAAACAGC | + |
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Preference number: 2 (lower is better) Translates to: ASGCVKPVTPHGVGWTRGHSKVF*REVRNS Trigger: GCTGTTTCTAACCTCCCTTCAGAAGACCTTACTGTG...GCCCCTTGTCCACCCAACTCCGTGTGGGGTCACCGGCTTCACACAGCCAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR CCA 90 bp | CACGGAGTTGGGTGGACAAGGGGCAGCCCCTGGTACCAGGTTCTCAGTCTCCAGCAGCCCCTCTTATTGTaGGCTGTGTTATCTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HGVGWTRGSPWYQVLSLQQPLLL*AVLSCC Trigger: ACAGCAAGATAACACAGCCCACAATAAGAGGGGCTG...CTGGAGACTGAGAACCTGGTACCAGGGGCTGCCCCTTGTCCACCCAACTCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGCTGTGTGAAGCCGGTGACCCCACACGGAGTTGGGTGGACAAGGGGCAGCATTCTGCACTCAGGTTaGCAGATTAGCTTGAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SGCVKPVTPHGVGWTRGSILHSG*QISLKL Trigger: TAGCTTCAAGCTAATCTGTCAACCTGAGTGCAGAAT...GCTGCCCCTTGTCCACCCAACTCCGTGTGGGGTCACCGGCTTCACACAGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAGGACTGCCTGCTGCTTTCCACACAGCCCTGGTAGGCATCTGGCTGTGTCAGCCCCTCTTATTGTaGGCTGTGTTATCTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: AGGLPAAFHTALVGIWLCQPLLL*AVLSCC Trigger: ACAGCAAGATAACACAGCCCACAATAAGAGGGGCTG...ACACAGCCAGATGCCTACCAGGGCTGTGTGGAAAGCAGCAGGCAGTCCTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | CACGGAGTTGGGTGGACAAGGGGCAGCCCCTGGTACCAGGTTCTCAGTCTCCAGTCCTCAGAGTTAGTTTaGTACCACATTCTGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: HGVGWTRGSPWYQVLSLQSSELV*YHILHS Trigger: TGAGTGCAGAATGTGGTATCAAACTAACTCTGAGGA...CTGGAGACTGAGAACCTGGTACCAGGGGCTGCCCCTTGTCCACCCAACTCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGAGGACTGCCTGCTGCTTTCCACACAGCCCTGGTAGGCATCTGGCTGTGTATTCTGCACTCAGGTTaGCAGATTAGCTTGAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: AGGLPAAFHTALVGIWLCILHSG*QISLKL Trigger: TAGCTTCAAGCTAATCTGTCAACCTGAGTGCAGAAT...ACACAGCCAGATGCCTACCAGGGCTGTGTGGAAAGCAGCAGGCAGTCCTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGAGGACTGCCTGCTGCTTTCCACACAGCCCTGGTAGGCATCTGGCTGTGTGACAAAATCCCACATTaGAATTTCCCAGTGTTAGTA | + |
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Preference number: 2 (lower is better) Translates to: AGGLPAAFHTALVGIWLCDKIPH*NFPVLV Trigger: TACTAACACTGGGAAATTGCAATGTGGGATTTTGTC...ACACAGCCAGATGCCTACCAGGGCTGTGTGGAAAGCAGCAGGCAGTCCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATTTCCTCAATGATTTACTCTTTTCCACGGTGTGCCTATTTTTATCATGTCCCACACGGAGTTGGGTaGACAAGGGGCAGCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: QISSMIYSFPRCAYFYHVPHGVG*TRGSPW Trigger: CCAGGGGCTGCCCCTTGTCCACCCAACTCCGTGTGG...GACATGATAAAAATAGGCACACCGTGGAAAAGAGTAAATCATTGAGGAAATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCAAATTTCCTCAATGATTTACTCTTTTCCACGGTGTGCCTATTTTTATCAGAAAGCTTAAGAGAGTaGGGAGGGAACAAGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SPNFLNDLLFSTVCLFLSESLRE*GGNKQP Trigger: GGGCTGCTTGTTCCCTCCTCACTCTCTTAAGCTTTC...TGATAAAAATAGGCACACCGTGGAAAAGAGTAAATCATTGAGGAAATTTGGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR CAA 90 bp | AGGGAGGTTAGAAACAGCTCCTTAGAAGAAAGCTTATCCCATAGTTaGAGTACAGTGGGCCTTGATGAACAGAGACAGTCTACAGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: REVRNSSLEESLSHS*STVGLDEQRQSTVL Trigger: TAAAACTGTAGACTGTCTCTGTTCATCAAGGCCCACTGTACTCAAACTATGGGATAAGCTTTCTTCTAAGGAGCTGTTTCTAACCTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAGAAAGCTTATCCCATAGTTTGAGTACAGTGGGCCTTGATGAACAGAGATACCATTCATGTAGTTaGGAATTACCACCCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: LEESLSHSLSTVGLDEQRYHSCS*ELPPIG Trigger: CCCAATGGGTGGTAATTCCCAACTACATGAATGGTA...TCTCTGTTCATCAAGGCCCACTGTACTCAAACTATGGGATAAGCTTTCTTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | CATAGCCCATTGTCCGACAAAATCCCACATTGCAATTTCCCAGTGTTAGTATATCCTACATTGAGGATCTaGTGTGAACATTACTTACTG | + |
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Preference number: 2 (lower is better) Translates to: HSPLSDKIPHCNFPVLVYPTLRI*CEHYLL Trigger: CAGTAAGTAATGTTCACATCAGATCCTCAATGTAGG...ATATACTAACACTGGGAAATTGCAATGTGGGATTTTGTCGGACAATGGGCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATTTCCTCAATGATTTACTCTTTTCCACGGTGTGCCTATTTTTATCATGTCCACAGTAAGGTCTTCTaGAGGGAGGTTAGAAACAGC | + |
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Preference number: 2 (lower is better) Translates to: QISSMIYSFPRCAYFYHVHSKVF*REVRNS Trigger: GCTGTTTCTAACCTCCCTTCAGAAGACCTTACTGTG...GACATGATAAAAATAGGCACACCGTGGAAAAGAGTAAATCATTGAGGAAATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGAAGAAAGCTTATCCCATAGTTTGAGTACAGTGGGCCTTGATGAACAGAGATTTGATACCACATTCTaGACTCAGGTTGACAGATTA | + |
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Preference number: 2 (lower is better) Translates to: LEESLSHSLSTVGLDEQRFDTTF*TQVDRL Trigger: TAATCTGTCAACCTGAGTGCAGAATGTGGTATCAAA...TCTCTGTTCATCAAGGCCCACTGTACTCAAACTATGGGATAAGCTTTCTTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATTGTCACCAATCTCTTGTATATTCTCTACAACTGTTTATTTCCTCAGAGTCCTACATTGAGGATCTaGTGTGAACATTACTTACTG | + |
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Preference number: 2 (lower is better) Translates to: SIVTNLLYILYNCLFPQSPTLRI*CEHYLL Trigger: CAGTAAGTAATGTTCACATCAGATCCTCAATGTAGG...ACTCTGAGGAAATAAACAGTTGTAGAGAATATACAAGAGATTGGTGACAATGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGATATCAAAAGCCTCCCTTCAAAAGAGCCTGCAATCCTATATTCATATAGCTCACAGACATCCATaGTTCAAATTCTATGTGATA | + |
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Preference number: 2 (lower is better) Translates to: CLISKASLQKSLQSYIHIAHRHP*FKFYVI Trigger: TATCACATAGAATTTGAATCATGGATGTCTGTGAGC...TATATGAATATAGGATTGCAGGCTCTTTTGAAGGGAGGCTTTTGATATCAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATATCAAAAGCCTCCCTTCAAAAGAGCCTGCAATCCTATATTCATATAGTTGCTCACAGACATCCATaGTTCAAATTCTATGTGATA | + |
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Preference number: 2 (lower is better) Translates to: LISKASLQKSLQSYIHIVAHRHP*FKFYVI Trigger: TATCACATAGAATTTGAATCATGGATGTCTGTGAGC...AACTATATGAATATAGGATTGCAGGCTCTTTTGAAGGGAGGCTTTTGATATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCAAATTTCCTCAATGATTTACTCTTTTCCACGGTGTGCCTATTTTTATCAGACAAAATCCCACATTaGAATTTCCCAGTGTTAGTA | + |
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Preference number: 2 (lower is better) Translates to: SPNFLNDLLFSTVCLFLSDKIPH*NFPVLV Trigger: TACTAACACTGGGAAATTGCAATGTGGGATTTTGTC...TGATAAAAATAGGCACACCGTGGAAAAGAGTAAATCATTGAGGAAATTTGGGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR CAA 90 bp | GCATCTGGCTGTGTGAAGCCGGTGACCCCACACGGAGTTGGGTGGACAAGGGGCGTGGGGGCCATAACTTaGACAGGAGCCAGGGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: ASGCVKPVTPHGVGWTRGVGAIT*TGARVP Trigger: TGGAACCCTGGCTCCTGTCAAAGTTATGGCCCCCAC...GCCCCTTGTCCACCCAACTCCGTGTGGGGTCACCGGCTTCACACAGCCAGATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR GCA 72 bp | GTGCTCTGGGCAGGCAGATGCAGGAGGACTGCCTGCTaGTTTCCACACAGCCCTGGTAGGCATCTGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VLWAGRCRRTAC*FPHSPGRHLAV Trigger: CACAGCCAGATGCCTACCAGGGCTGTGTGGAAAGCAGCAGGCAGTCCTCCTGCATCTGCCTGCCCAGAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR CCA 72 bp | CTGCCTGCTGCTTTCCACACAGCCCTGGTAGGCATCTaGCTGTGTGAAGCCGGTGACCCCACACGGAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: LPAAFHTALVGI*LCEAGDPTRSW Trigger: CCAACTCCGTGTGGGGTCACCGGCTTCACACAGCCAGATGCCTACCAGGGCTGTGTGGAAAGCAGCAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGCGAGAGCAGAGGCATCAGGCCAGAGTTCCTGTGCTCTGGGCAGGCAGATGGTGGGGGCCATAACTTaGACAGGAGCCAGGGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: RARAEASGQSSCALGRQMVGAIT*TGARVP Trigger: TGGAACCCTGGCTCCTGTCAAAGTTATGGCCCCCAC...CATCTGCCTGCCCAGAGCACAGGAACTCTGGCCTGATGCCTCTGCTCTCGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR GCA 72 bp | CATCAGGCCAGAGTTCCTGTGCTCTGGGCAGGCAGATaGAGGAGGACTGCCTGCTGCTTTCCACACAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: HQARVPVLWAGR*RRTACCFPHSP Trigger: AGGGCTGTGTGGAAAGCAGCAGGCAGTCCTCCTGCATCTGCCTGCCCAGAGCACAGGAACTCTGGCCTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR CCA 72 bp | ATTGGGTTCTACCGGGATTCCAGATCTAGCCTCAATTaGAAACCAGGCTGTCTGTGCATAGCCCATTGTCCG | + |
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Preference number: 3 (lower is better) Translates to: IGFYRDSRSSLN*KPGCLCIAHCP Trigger: CGGACAATGGGCTATGCACAGACAGCCTGGTTTCCAATTGAGGCTAGATCTGGAATCCCGGTAGAACCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR CCA 72 bp | CAGGAGACATGGTCGAATGCCTACCATTCATGTAGTTaGGAATTACCACCCATTGGGTTCTACCGGGATTCC | + |
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Preference number: 3 (lower is better) Translates to: QETWSNAYHSCS*ELPPIGFYRDS Trigger: GGAATCCCGGTAGAACCCAATGGGTGGTAATTCCCAACTACATGAATGGTAGGCATTCGACCATGTCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAGACATGGTCGAATGCCTACCATTCATGTAGTTGGGAATTACCACCCATTGCGACAAAATCCCACATaGCAATTTCCCAGTGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: RRHGRMPTIHVVGNYHPLRQNPT*QFPSVS Trigger: ACTAACACTGGGAAATTGCAATGTGGGATTTTGTCG...CAATGGGTGGTAATTCCCAACTACATGAATGGTAGGCATTCGACCATGTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCTGATATCAAAAGCCTCCCTTCAAAAGAGCCTGCAATCCTATATTCATATAGGGAATTACCACCCATaGGGTTCTACCGGGATTCCA | + |
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Preference number: 3 (lower is better) Translates to: CLISKASLQKSLQSYIHIGNYHP*GSTGIP Trigger: TGGAATCCCGGTAGAACCCAATGGGTGGTAATTCCC...TATATGAATATAGGATTGCAGGCTCTTTTGAAGGGAGGCTTTTGATATCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR TCA 90 bp | CACGGAGTTGGGTGGACAAGGGGCAGCCCCTGGTACCAGGTTCTCAGTCTCCAGTGGGAGCTCTGGCTTTaGACTGTGCTGACTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: HGVGWTRGSPWYQVLSLQWELWL*TVLTWN Trigger: ATTCCAAGTCAGCACAGTTCAAAGCCAGAGCTCCCA...CTGGAGACTGAGAACCTGGTACCAGGGGCTGCCCCTTGTCCACCCAACTCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR GCA 90 bp | GCAGGAGGACTGCCTGCTGCTTTCCACACAGCCCTGGTAGGCATCTGGCTGTGTCAGAAAGGGGCAGAGTaGTGGAAAGCATGCACTCAT | + |
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Preference number: 4 (lower is better) Translates to: AGGLPAAFHTALVGIWLCQKGAE*WKACTH Trigger: ATGAGTGCATGCTTTCCAGCACTCTGCCCCTTTCTG...ACACAGCCAGATGCCTACCAGGGCTGTGTGGAAAGCAGCAGGCAGTCCTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR GCA 90 bp | AGGGCGAGAGCAGAGGCATCAGGCCAGAGTTCCTGTGCTCTGGGCAGGCAGATGCAAGGGAAAATCCCCTaGAAACTCTATGCAAATAAA | + |
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Preference number: 4 (lower is better) Translates to: RARAEASGQSSCALGRQMQGKIP*KLYANK Trigger: TTTATTTGCATAGAGTTTGCAGGGGATTTTCCCTTG...CATCTGCCTGCCCAGAGCACAGGAACTCTGGCCTGATGCCTCTGCTCTCGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR CAA 72 bp | CCTCAATTGGAAACCAGGCTGTCTGTGCATAGCCCATaGTCCGACAAAATCCCACATTGCAATTTCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PQLETRLSVHSP*SDKIPHCNFPV Trigger: CACTGGGAAATTGCAATGTGGGATTTTGTCGGACAATGGGCTATGCACAGACAGCCTGGTTTCCAATTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR GCA 90 bp | AGACATGGTCGAATGCCTACCATTCATGTAGTTGGGAATTACCACCCATTGGGTCACTCAACAGACATGTaGAACCAAGGGAAAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: RHGRMPTIHVVGNYHPLGHSTDM*NQGKIP Trigger: GGGGATTTTCCCTTGGTTGCACATGTCTGTTGAGTG...ACCCAATGGGTGGTAATTCCCAACTACATGAATGGTAGGCATTCGACCATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR TCA 90 bp | AGACATGGTCGAATGCCTACCATTCATGTAGTTGGGAATTACCACCCATTGGGTTCACTGTTAGGATCATaGAGGTATTTACAAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: RHGRMPTIHVVGNYHPLGSLLGS*RYLQVG Trigger: GCCTACTTGTAAATACCTTCATGATCCTAACAGTGA...ACCCAATGGGTGGTAATTCCCAACTACATGAATGGTAGGCATTCGACCATGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR CAA 72 bp | AGAAACAGCTCCTTAGAAGAAAGCTTATCCCATAGTTaGAGTACAGTGGGCCTTGATGAACAGAGACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: RNSSLEESLSHS*STVGLDEQRQS Trigger: AGACTGTCTCTGTTCATCAAGGCCCACTGTACTCAAACTATGGGATAAGCTTTCTTCTAAGGAGCTGTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR TCA 90 bp | CAAATTTCCTCAATGATTTACTCTTTTCCACGGTGTGCCTATTTTTATCATGTCTGCAGAGAACAACCATaGTGTTGGCCCAGGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QISSMIYSFPRCAYFYHVCREQP*CWPRSG Trigger: ACCTGACCTGGGCCAACATCATGGTTGTTCTCTGCA...GACATGATAAAAATAGGCACACCGTGGAAAAGAGTAAATCATTGAGGAAATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR TCA 90 bp | CTGATATCAAAAGCCTCCCTTCAAAAGAGCCTGCAATCCTATATTCATATAGTTTGGGAGCTCTGGCTTTaGACTGTGCTGACTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LISKASLQKSLQSYIHIVWELWL*TVLTWN Trigger: ATTCCAAGTCAGCACAGTTCAAAGCCAGAGCTCCCA...AACTATATGAATATAGGATTGCAGGCTCTTTTGAAGGGAGGCTTTTGATATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR TCA 90 bp | AGGAGACATGGTCGAATGCCTACCATTCATGTAGTTGGGAATTACCACCCATTGTTTGGTCTCATTAAATaGCTTAGTAGCCAAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: RRHGRMPTIHVVGNYHPLFGLIK*LSSQGS Trigger: AGATCCTTGGCTACTAAGTCATTTAATGAGACCAAA...CAATGGGTGGTAATTCCCAACTACATGAATGGTAGGCATTCGACCATGTCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR GCA 90 bp | AGGAGACATGGTCGAATGCCTACCATTCATGTAGTTGGGAATTACCACCCATTGGAAGGCCAATATGATTaGATATACTGTGTGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: RRHGRMPTIHVVGNYHPLEGQYD*IYCVNV Trigger: CACATTCACACAGTATATGCAATCATATTGGCCTTC...CAATGGGTGGTAATTCCCAACTACATGAATGGTAGGCATTCGACCATGTCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR GCA 90 bp | TGTCTGATATCAAAAGCCTCCCTTCAAAAGAGCCTGCAATCCTATATTCATATACAGAAAGGGGCAGAGTaGTGGAAAGCATGCACTCAT | + |
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Preference number: 4 (lower is better) Translates to: CLISKASLQKSLQSYIHIQKGAE*WKACTH Trigger: ATGAGTGCATGCTTTCCAGCACTCTGCCCCTTTCTG...TATATGAATATAGGATTGCAGGCTCTTTTGAAGGGAGGCTTTTGATATCAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR TCA 90 bp | TGTCTGATATCAAAAGCCTCCCTTCAAAAGAGCCTGCAATCCTATATTCATATACCTTCTGCTTATGCTTaGCTAAGAACAACACCATGG | + |
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Preference number: 4 (lower is better) Translates to: CLISKASLQKSLQSYIHIPSAYA*LRTTPW Trigger: CCATGGTGTTGTTCTTAGTCAAGCATAAGCAGAAGG...TATATGAATATAGGATTGCAGGCTCTTTTGAAGGGAGGCTTTTGATATCAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR GCA 90 bp | CAAATTTCCTCAATGATTTACTCTTTTCCACGGTGTGCCTATTTTTATCATGTCCACTCAACAGACATGTaGAACCAAGGGAAAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: QISSMIYSFPRCAYFYHVHSTDM*NQGKIP Trigger: GGGGATTTTCCCTTGGTTGCACATGTCTGTTGAGTG...GACATGATAAAAATAGGCACACCGTGGAAAAGAGTAAATCATTGAGGAAATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR TCA 90 bp | CAAATTTCCTCAATGATTTACTCTTTTCCACGGTGTGCCTATTTTTATCATGTCCCTTCTGCTTATGCTTaGCTAAGAACAACACCATGG | + |
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Preference number: 4 (lower is better) Translates to: QISSMIYSFPRCAYFYHVPSAYA*LRTTPW Trigger: CCATGGTGTTGTTCTTAGTCAAGCATAAGCAGAAGG...GACATGATAAAAATAGGCACACCGTGGAAAAGAGTAAATCATTGAGGAAATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR GCA 90 bp | CATAGCCCATTGTCCGACAAAATCCCACATTGCAATTTCCCAGTGTTAGTATATCAAGGGAAAATCCCCTaGAAACTCTATGCAAATAAA | + |
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Preference number: 4 (lower is better) Translates to: HSPLSDKIPHCNFPVLVYQGKIP*KLYANK Trigger: TTTATTTGCATAGAGTTTGCAGGGGATTTTCCCTTG...ATATACTAACACTGGGAAATTGCAATGTGGGATTTTGTCGGACAATGGGCTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR TCA 90 bp | TGTCTGATATCAAAAGCCTCCCTTCAAAAGAGCCTGCAATCCTATATTCATATATCACTGTTAGGATCATaGAGGTATTTACAAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: CLISKASLQKSLQSYIHISLLGS*RYLQVG Trigger: GCCTACTTGTAAATACCTTCATGATCCTAACAGTGA...TATATGAATATAGGATTGCAGGCTCTTTTGAAGGGAGGCTTTTGATATCAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR TCA 90 bp | TGTCTGATATCAAAAGCCTCCCTTCAAAAGAGCCTGCAATCCTATATTCATATATTTGGTCTCATTAAATaGCTTAGTAGCCAAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: CLISKASLQKSLQSYIHIFGLIK*LSSQGS Trigger: AGATCCTTGGCTACTAAGTCATTTAATGAGACCAAA...TATATGAATATAGGATTGCAGGCTCTTTTGAAGGGAGGCTTTTGATATCAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| 3UTR CAA 72 bp | TGGTATCCAACACCAGTAAATTATAAGTGTTCTCCATaGTCACCAATCTCTTGTATATTCTCTACAACTGTT | + |
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Preference number: 4 (lower is better) Translates to: WYPTPVNYKCSP*SPISCIFSTTV Trigger: AACAGTTGTAGAGAATATACAAGAGATTGGTGACAATGGAGAACACTTATAATTTACTGGTGTTGGATACCA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR CAA 90 bp | AGGGCGAGAGCAGAGGCATCAGGCCAGAGTTCCTGTGCTCTGGGCAGGCAGATGGACCAAATGCAGTCATaGTCTGAGGGATTCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: RARAEASGQSSCALGRQMDQMQS*SEGFLC Trigger: GCAAAGGAATCCCTCAGACAATGACTGCATTTGGTC...CATCTGCCTGCCCAGAGCACAGGAACTCTGGCCTGATGCCTCTGCTCTCGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR CAA 90 bp | TCTGGCTGTGTGAAGCCGGTGACCCCACACGGAGTTGGGTGGACAAGGGGCAGCGAAGAACTAATGATTTaGGGAGCTCTGGCTTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: SGCVKPVTPHGVGWTRGSEELMI*GALALN Trigger: GTTCAAAGCCAGAGCTCCCAAAATCATTAGTTCTTC...GCTGCCCCTTGTCCACCCAACTCCGTGTGGGGTCACCGGCTTCACACAGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS GCA 90 bp | AGTATAGTTTCTGGTGAGCAGAAAGGGGCAGAGTGCTGGAAAGCATaGACTCATGGCCACATTGACACTGACCAGCCATGTATCTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SIVSGEQKGAECWKA*THGHIDTDQPCICS Trigger: GGAACAGATACATGGCTGGTCAGTGTCAATGTGGCCATGAGTGCATGCTTTCCAGCACTCTGCCCCTTTCTGCTCACCAGAAACTATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055847.4 ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS GCA 90 bp | CTTAAAAACCCTAGTATAGTTTCTGGTGAGCAGAAAGGGGCAGAGTaGTGGAAAGCATGCACTCATGGCCACATTGACACTGACCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LKNPSIVSGEQKGAE*WKACTHGHIDTDQP Trigger: TGGCTGGTCAGTGTCAATGTGGCCATGAGTGCATGCTTTCCAGCACTCTGCCCCTTTCTGCTCACCAGAAACTATACTAGGGTTTTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055847.4 ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR CAA 90 bp | AGACATGGTCGAATGCCTACCATTCATGTAGTTGGGAATTACCACCCATTGGGTAGAACAACCATGATGTaGGCCCAGGTCAGGTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: RHGRMPTIHVVGNYHPLGRTTMM*AQVRCL Trigger: TAAACACCTGACCTGGGCCAACATCATGGTTGTTCT...ACCCAATGGGTGGTAATTCCCAACTACATGAATGGTAGGCATTCGACCATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR CAA 90 bp | AGGAGACATGGTCGAATGCCTACCATTCATGTAGTTGGGAATTACCACCCATTGGACCAAATGCAGTCATaGTCTGAGGGATTCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: RRHGRMPTIHVVGNYHPLDQMQS*SEGFLC Trigger: GCAAAGGAATCCCTCAGACAATGACTGCATTTGGTC...CAATGGGTGGTAATTCCCAACTACATGAATGGTAGGCATTCGACCATGTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR CAA 90 bp | TTAGAAGAAAGCTTATCCCATAGTTTGAGTACAGTGGGCCTTGATGAACAGAGATTGGGAGCTCTGGCTTaGAACTGTGCTGACTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LEESLSHSLSTVGLDEQRLGALA*NCADLE Trigger: TTCCAAGTCAGCACAGTTCAAAGCCAGAGCTCCCAA...TCTCTGTTCATCAAGGCCCACTGTACTCAAACTATGGGATAAGCTTTCTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR CAA 90 bp | CATAGCCCATTGTCCGACAAAATCCCACATTGCAATTTCCCAGTGTTAGTATATAGAACAACCATGATGTaGGCCCAGGTCAGGTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: HSPLSDKIPHCNFPVLVYRTTMM*AQVRCL Trigger: TAAACACCTGACCTGGGCCAACATCATGGTTGTTCT...ATATACTAACACTGGGAAATTGCAATGTGGGATTTTGTCGGACAATGGGCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS-3UTR CAA 90 bp | TGTCTGATATCAAAAGCCTCCCTTCAAAAGAGCCTGCAATCCTATATTCATATAGAAGAACTAATGATTTaGGGAGCTCTGGCTTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: CLISKASLQKSLQSYIHIEELMI*GALALN Trigger: GTTCAAAGCCAGAGCTCCCAAAATCATTAGTTCTTC...TATATGAATATAGGATTGCAGGCTCTTTTGAAGGGAGGCTTTTGATATCAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS CAA 72 bp | GGGCAGAGTGCTGGAAAGCATGCACTCATGGCCACATaGACACTGACCAGCCATGTATCTGTTCCATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GQSAGKHALMAT*TLTSHVSVPSW Trigger: CCAGGATGGAACAGATACATGGCTGGTCAGTGTCAATGTGGCCATGAGTGCATGCTTTCCAGCACTCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055847.4 ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS CAA 90 bp | AGCAGAAAGGGGCAGAGTGCTGGAAAGCATGCACTCATGGCCACATaGACACTGACCAGCCATGTATCTGTTCCATCCTGGAAAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: SRKGQSAGKHALMAT*TLTSHVSVPSWKEK Trigger: TTTTTCTTTCCAGGATGGAACAGATACATGGCTGGTCAGTGTCAATGTGGCCATGAGTGCATGCTTTCCAGCACTCTGCCCCTTTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055847.4 ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS TCA 72 bp | ACTAATGATTTTGGGAGCTCTGGCTTTGAACTGTGCTaGCTTGGAATTGTTGAGGCTAATAGTGATGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TNDFGSSGFELC*LGIVEANSDGL Trigger: CAGGCCATCACTATTAGCCTCAACAATTCCAAGTCAGCACAGTTCAAAGCCAGAGCTCCCAAAATCATTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055847.4 ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS CAA 72 bp | ACCAGAGAAGAACTAATGATTTTGGGAGCTCTGGCTTaGAACTGTGCTGACTTGGAATTGTTGAGGCTAATA | + |
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Preference number: 6 (lower is better) Translates to: TREELMILGALA*NCADLELLRLI Trigger: TATTAGCCTCAACAATTCCAAGTCAGCACAGTTCAAAGCCAGAGCTCCCAAAATCATTAGTTCTTCTCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055847.4 ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS CAA 72 bp | AAACTGCTCACTAGCATACAAATACTTTGTGTGGCTTaGGTCTCATTAAATGACTTAGTAGCCAAGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: KLLTSIQILCVA*VSLNDLVAKDL Trigger: CAGATCCTTGGCTACTAAGTCATTTAATGAGACCAAAGCCACACAAAGTATTTGTATGCTAGTGAGCAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055847.4 ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS TCA 72 bp | CATACAAATACTTTGTGTGGCTTTGGTCTCATTAAATaGCTTAGTAGCCAAGGATCTGTGAATATACTGGAC | + |
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Preference number: 6 (lower is better) Translates to: HTNTLCGFGLIK*LSSQGSVNILD Trigger: GTCCAGTATATTCACAGATCCTTGGCTACTAAGTCATTTAATGAGACCAAAGCCACACAAAGTATTTGTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055847.4 ENSMUST00000226255.2 ENSMUST00000228090.2 |
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| CDS GCA 72 bp | TCCCAAACATATAGCATCACTGAAGGCCAATATGATTaGATATACTGTGTGAATGTGTTTGAAATTCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: SQTYSITEGQYD*IYCVNVFEILY Trigger: GTAAAGAATTTCAAACACATTCACACAGTATATGCAATCATATTGGCCTTCAGTGATGCTATATGTTTGGGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055847.4 ENSMUST00000226255.2 ENSMUST00000228090.2 |
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