Pregenerated sensors for VMN1R7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000093696

Ensembl transcript IDs: ENSMUST00000176252.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	TGCACTGAGGCTATACAGAGTGATTCTTTTTACCTATTTGTAAGACTAAATCCAATCTTCTTACCTCTGTaGGCACCAGAAATACAAACA	+
Preference number: 2 (lower is better) Translates to: CTEAIQSDSFYLFVRLNPIFLPL*APEIQT Trigger: TGTTTGTATTTCTGGTGCCCACAGAGGTAAGAAGAT...TGGATTTAGTCTTACAAATAGGTAAAAAGAATCACTCTGTATAGCCTCAGTGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
3UTR-3UTR CAA 90 bp	ACTGAGGCTATACAGAGTGATTCTTTTTACCTATTTGTAAGACTAAATCCAAGGAACATACATACACATTaGCCACAGCACACACTGGTA	+
Preference number: 3 (lower is better) Translates to: TEAIQSDSFYLFVRLNPRNIHTH*PQHTLV Trigger: TACCAGTGTGTGCTGTGGCAAATGTGTATGTATGTT...CCTTGGATTTAGTCTTACAAATAGGTAAAAAGAATCACTCTGTATAGCCTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR TCA 90 bp	ACTGAGGCTATACAGAGTGATTCTTTTTACCTATTTGTAAGACTAAATCCAAGGGGGTGGCTGAAGCTATaGAGATGCTTGCATTGCCTC	+
Preference number: 4 (lower is better) Translates to: TEAIQSDSFYLFVRLNPRGWLKL*RCLHCL Trigger: GAGGCAATGCAAGCATCTTCATAGCTTCAGCCACCC...CCTTGGATTTAGTCTTACAAATAGGTAAAAAGAATCACTCTGTATAGCCTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR TCA 90 bp	AGACTAAATCCAAGGAATCCTATGATATCTTCTTACCTCTGTGGGCACCAGAAAGGCCTCTCATCACTCTaGATAAGTAGAATGTTGTCT	+
Preference number: 4 (lower is better) Translates to: RLNPRNPMISSYLCGHQKGLSSL*ISRMLS Trigger: AGACAACATTCTACTTATTCAGAGTGATGAGAGGCC...TTTCTGGTGCCCACAGAGGTAAGAAGATATCATAGGATTCCTTGGATTTAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR TCA 90 bp	AGACTAAATCCAAGGAATCCTATGATATCTTCTTACCTCTGTGGGCACCAGAAAATTCCCAATGTTCAGTaGCTCAAATATGTCTGCAAG	+
Preference number: 4 (lower is better) Translates to: RLNPRNPMISSYLCGHQKIPNVQ*LKYVCK Trigger: CTTGCAGACATATTTGAGTCACTGAACATTGGGAAT...TTTCTGGTGCCCACAGAGGTAAGAAGATATCATAGGATTCCTTGGATTTAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR TCA 90 bp	AGACTAAATCCAAGGAATCCTATGATATCTTCTTACCTCTGTGGGCACCAGAAAGGGTGGCACTTTGACTaGATATTTTTCAGCATAATT	+
Preference number: 4 (lower is better) Translates to: RLNPRNPMISSYLCGHQKGWHFD*IFFSII Trigger: AATTATGCTGAAAAATATTCAGTCAAAGTGCCACCC...TTTCTGGTGCCCACAGAGGTAAGAAGATATCATAGGATTCCTTGGATTTAGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR TCA 90 bp	ACTGAGGCTATACAGAGTGATTCTTTTTACCTATTTGTAAGACTAAATCCAAGGTACATCATAAACTTCTaGAGAGTCAGGATGACTGGG	+
Preference number: 4 (lower is better) Translates to: TEAIQSDSFYLFVRLNPRYIINF*RVRMTG Trigger: CCCAGTCATCCTGACTCTTCAGAAGTTTATGATGTA...CCTTGGATTTAGTCTTACAAATAGGTAAAAAGAATCACTCTGTATAGCCTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR TCA 90 bp	ACTGAGGCTATACAGAGTGATTCTTTTTACCTATTTGTAAGACTAAATCCAAGGACTCGGGTGGCACTTTaGCTGAATATTTTTCAGCAT	+
Preference number: 4 (lower is better) Translates to: TEAIQSDSFYLFVRLNPRTRVAL*LNIFQH Trigger: ATGCTGAAAAATATTCAGTCAAAGTGCCACCCGAGT...CCTTGGATTTAGTCTTACAAATAGGTAAAAAGAATCACTCTGTATAGCCTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR TCA 90 bp	TGCACTGAGGCTATACAGAGTGATTCTTTTTACCTATTTGTAAGACTAAATCCACACATCTCTGGAGATTaGTATTGTAAAAATCAGTCC	+
Preference number: 4 (lower is better) Translates to: CTEAIQSDSFYLFVRLNPHISGD*YCKNQS Trigger: GGACTGATTTTTACAATATCAATCTCCAGAGATGTG...TGGATTTAGTCTTACAAATAGGTAAAAAGAATCACTCTGTATAGCCTCAGTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR CAA 90 bp	AGACTAAATCCAAGGAATCCTATGATATCTTCTTACCTCTGTGGGCACCAGAAAGTGACCTGCATCTGGTaGGTCTCACTCACATTGGTA	+
Preference number: 5 (lower is better) Translates to: RLNPRNPMISSYLCGHQKVTCIW*VSLTLV Trigger: TACCAATGTGAGTGAGACCAACCAGATGCAGGTCAC...TTTCTGGTGCCCACAGAGGTAAGAAGATATCATAGGATTCCTTGGATTTAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR CAA 90 bp	AGACTAAATCCAAGGAATCCTATGATATCTTCTTACCTCTGTGGGCACCAGAAAAACTCGGGTGGCACTTaGACTGAATATTTTTCAGCA	+
Preference number: 5 (lower is better) Translates to: RLNPRNPMISSYLCGHQKNSGGT*TEYFSA Trigger: TGCTGAAAAATATTCAGTCAAAGTGCCACCCGAGTT...TTTCTGGTGCCCACAGAGGTAAGAAGATATCATAGGATTCCTTGGATTTAGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR CAA 90 bp	ACTGAGGCTATACAGAGTGATTCTTTTTACCTATTTGTAAGACTAAATCCAAGGGTGAACAAAGGACAGTaGACAGGAGATCAGGTCTGT	+
Preference number: 5 (lower is better) Translates to: TEAIQSDSFYLFVRLNPRVNKGQ*TGDQVC Trigger: ACAGACCTGATCTCCTGTCAACTGTCCTTTGTTCAC...CCTTGGATTTAGTCTTACAAATAGGTAAAAAGAATCACTCTGTATAGCCTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR CAA 90 bp	AGACTAAATCCAAGGAATCCTATGATATCTTCTTACCTCTGTGGGCACCAGAAAGTTATCAGAACTGATTaGTACCAAAGGGGTAATTGT	+
Preference number: 5 (lower is better) Translates to: RLNPRNPMISSYLCGHQKVIRTD*YQRGNC Trigger: ACAATTACCCCTTTGGTACAAATCAGTTCTGATAAC...TTTCTGGTGCCCACAGAGGTAAGAAGATATCATAGGATTCCTTGGATTTAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS-3UTR CAA 90 bp	ACTGAGGCTATACAGAGTGATTCTTTTTACCTATTTGTAAGACTAAATCCAAGGGACTCCAAGTCCGGTTaGGAAATAAAGAACATTTTT	+
Preference number: 5 (lower is better) Translates to: TEAIQSDSFYLFVRLNPRDSKSG*EIKNIF Trigger: AAAAATGTTCTTTATTTCCAAACCGGACTTGGAGTC...CCTTGGATTTAGTCTTACAAATAGGTAAAAAGAATCACTCTGTATAGCCTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS CCA 72 bp	ATGGGTAAGAGTGAGCAGGATTTAGTGACCTGCATCTaGTTGGTCTCACTCACATTGGTAAAACCACCAACA	+
Preference number: 6 (lower is better) Translates to: MGKSEQDLVTCI*LVSLTLVKPPT Trigger: TGTTGGTGGTTTTACCAATGTGAGTGAGACCAACCAGATGCAGGTCACTAAATCCTGCTCACTCTTACCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176252.2
CDS TCA 72 bp	ACTCAAATATGTCTGCAAGCAAAATATCCCCTCCAATaGGAACCACCATTATGTGAACAAAGGACAGTTGAC	+
Preference number: 6 (lower is better) Translates to: TQICLQAKYPLQ*EPPLCEQRTVD Trigger: GTCAACTGTCCTTTGTTCACATAATGGTGGTTCTCATTGGAGGGGATATTTTGCTTGCAGACATATTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176252.2

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