Pregenerated sensors for VMN1R69 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091662Ensembl transcript IDs: ENSMUST00000163658.3, ENSMUST00000176284.9, ENSMUST00000176707.3, ENSMUST00000226160.2, ENSMUST00000226190.2, ENSMUST00000226228.2, ENSMUST00000227853.2, ENSMUST00000228296.2, ENSMUST00000228478.2, ENSMUST00000228638.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAGTAAACAGAGCAACAATGATCACTGATGTACAAATATCTCAGTaGTATGATGTAGAGTTCTCTGGGCATATGTGCAGAAGTGTAATG | + |
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Preference number: 1 (lower is better) Translates to: IVNRATMITDVQISQ*YDVEFSGHMCRSVM Trigger: CATTACACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTACATCAGTGATCATTGTTGCTCTGTTTACTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR GCA 90 bp | GTACAAATATCTCAGTGGTATGATGTAGAGTTCTCTGGGCATATGTaGAGAAGTGTAATGCCTGATTCAAATAGTAGTTGTATTTCTAAT | + |
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Preference number: 1 (lower is better) Translates to: VQISQWYDVEFSGHM*RSVMPDSNSSCISN Trigger: ATTAGAAATACAACTACTATTTGAATCAGGCATTACACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCCCTTTTCTGCCTCCTTTaGAAATCAGGTGGTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PSNCETTHQPKCAEEINPLFCLL*KSGGQK Trigger: CTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAG...GGGATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCTTTTCTGCCTCCTTTaGAAATCAGGTGGTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: VPATVKPLISQNVLKRLILFCLL*KSGGQK Trigger: CTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAG...GATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR-3UTR GCA 90 bp | GTACAAATATCTCAGTGGTATGATGTAGAGTTCTCTGGGCATATGTGCAGAAGTCTTTTCTGCCTCCTTTaGAAATCAGGTGGTCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VQISQWYDVEFSGHMCRSLFCLL*KSGGQK Trigger: CTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAG...ACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTATTATAGCCATGATTCCAAACCAGATAAAGACAATACAACAGAAATGGCTTTTCTGCCTCCTTTaGAAATCAGGTGGTCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EAIIAMIPNQIKTIQQKWLFCLL*KSGGQK Trigger: CTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAG...CCATTTCTGTTGTATTGTCTTTATCTGGTTTGGAATCATGGCTATAATAGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCCTCTTTTCTGCCTCCTTaGCAAATCAGGTGGTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PSNCETTHQPKCAEEINPSFLPP*QIRWSK Trigger: TTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGA...GGGATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR-3UTR CAA 90 bp | GTCCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCTCTTTTCTGCCTCCTTaGCAAATCAGGTGGTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VPATVKPLISQNVLKRLISFLPP*QIRWSK Trigger: TTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGA...GATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR-3UTR CAA 90 bp | GTACAAATATCTCAGTGGTATGATGTAGAGTTCTCTGGGCATATGTGCAGAAGTTCTTTTCTGCCTCCTTaGCAAATCAGGTGGTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: VQISQWYDVEFSGHMCRSSFLPP*QIRWSK Trigger: TTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGA...ACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR-3UTR CAA 90 bp | GTACAAATATCTCAGTGGTATGATGTAGAGTTCTCTGGGCATATGTGCAGAAGTGGTTTTATTGACAGTTaGGTTCTTTTCTGCCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: VQISQWYDVEFSGHMCRSGFIDS*VLFCLL Trigger: AAGGAGGCAGAAAAGAACCAAACTGTCAATAAAACC...ACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR CCA 72 bp | AGAGCAACAATGATCACTGATGTACAAATATCTCAGTaGTATGATGTAGAGTTCTCTGGGCATATGTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RATMITDVQISQ*YDVEFSGHMCR Trigger: TCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTACATCAGTGATCATTGTTGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGCTATTATAGCCATGATTCCAAACCAGATAAAGACAATACAACAGAAATGGGGTTTTATTGACAGTTaGGTTCTTTTCTGCCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: EAIIAMIPNQIKTIQQKWGFIDS*VLFCLL Trigger: AAGGAGGCAGAAAAGAACCAAACTGTCAATAAAACC...CCATTTCTGTTGTATTGTCTTTATCTGGTTTGGAATCATGGCTATAATAGCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCCTGTCAAGCCAAAAGCTaGCATTGTGTGAGGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: PSNCETTHQPKCAEEINPCQAKS*HCVRHS Trigger: GGAGTGCCTCACACAATGGCAGCTTTTGGCTTGACA...GGGATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCCGACAGGTACTGCCAATaGATATACTCCGGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: PSNCETTHQPKCAEEINPDRYCQ*IYSGQL Trigger: GAGTTGGCCGGAGTATATCCATTGGCAGTACCTGTC...GGGATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCCTCAAGAGACAGGTACTaGCAATGGATATACTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSNCETTHQPKCAEEINPSRDRY*QWIYSG Trigger: GCCGGAGTATATCCATTGGCAGTACCTGTCTCTTGA...GGGATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTTCTGCCTCCTTTGCAAATCAGGTGGTCAAAAGGATGAGGTCATGTAGGGACAGGTACTGCCAATaGATATACTCCGGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: FFSASFANQVVKRMRSCRDRYCQ*IYSGQL Trigger: GAGTTGGCCGGAGTATATCCATTGGCAGTACCTGTC...CCTACATGACCTCATCCTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTTCTGCCTCCTTTGCAAATCAGGTGGTCAAAAGGATGAGGTCATGTAGGTCAAGAGACAGGTACTaGCAATGGATATACTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: FFSASFANQVVKRMRSCRSRDRY*QWIYSG Trigger: GCCGGAGTATATCCATTGGCAGTACCTGTCTCTTGA...CCTACATGACCTCATCCTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | GTCCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCTCAAGAGACAGGTACTaGCAATGGATATACTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: VPATVKPLISQNVLKRLISRDRY*QWIYSG Trigger: GCCGGAGTATATCCATTGGCAGTACCTGTCTCTTGA...GATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | GCTGACTCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGTCAAGAGACAGGTACTaGCAATGGATATACTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: ADSTRQQAPIIISANTKRSRDRY*QWIYSG Trigger: GCCGGAGTATATCCATTGGCAGTACCTGTCTCTTGA...CCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGAGTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | TCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGAAACGGGACAGGTACTGCCAATaGATATACTCCGGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: STRQQAPIIISANTKRKRDRYCQ*IYSGQL Trigger: GAGTTGGCCGGAGTATATCCATTGGCAGTACCTGTC...CCGTTTCCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | TCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGAAACGGTCAAGAGACAGGTACTaGCAATGGATATACTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: STRQQAPIIISANTKRKRSRDRY*QWIYSG Trigger: GCCGGAGTATATCCATTGGCAGTACCTGTCTCTTGA...CCGTTTCCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | GTACAAATATCTCAGTGGTATGATGTAGAGTTCTCTGGGCATATGTGCAGAAGTGACAGGTACTGCCAATaGATATACTCCGGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: VQISQWYDVEFSGHMCRSDRYCQ*IYSGQL Trigger: GAGTTGGCCGGAGTATATCCATTGGCAGTACCTGTC...ACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | GACTCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGAAATCAAGAGACAGGTACTaGCAATGGATATACTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: DSTRQQAPIIISANTKRKSRDRY*QWIYSG Trigger: GCCGGAGTATATCCATTGGCAGTACCTGTCTCTTGA...TTTCCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | GTACAAATATCTCAGTGGTATGATGTAGAGTTCTCTGGGCATATGTGCAGAAGTTCAAGAGACAGGTACTaGCAATGGATATACTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: VQISQWYDVEFSGHMCRSSRDRY*QWIYSG Trigger: GCCGGAGTATATCCATTGGCAGTACCTGTCTCTTGA...ACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCCGTAGCCAACGTACTTTaGAGATTTGACTTTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: PSNCETTHQPKCAEEINPVANVL*RFDFLT Trigger: GGTCAAAAAGTCAAATCTGCAAAGTACGTTGGCTAC...GGGATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCCTTCGATGTCACTAGGTaGATGAGAATCAAATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: PSNCETTHQPKCAEEINPFDVTR*MRIKSV Trigger: AACAGATTTGATTCTCATGCACCTAGTGACATCGAA...GGGATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTTCTGCCTCCTTTGCAAATCAGGTGGTCAAAAGGATGAGGTCATGTAGGGTAGCCAACGTACTTTaGAGATTTGACTTTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: FFSASFANQVVKRMRSCRVANVL*RFDFLT Trigger: GGTCAAAAAGTCAAATCTGCAAAGTACGTTGGCTAC...CCTACATGACCTCATCCTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | GCTGACTCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGGTAGCCAACGTACTTTaGAGATTTGACTTTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: ADSTRQQAPIIISANTKRVANVL*RFDFLT Trigger: GGTCAAAAAGTCAAATCTGCAAAGTACGTTGGCTAC...CCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGAGTCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTTCTGCCTCCTTTGCAAATCAGGTGGTCAAAAGGATGAGGTCATGTAGGTTAGGAGCCACCAATTaGGATTATTCTGAAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: FFSASFANQVVKRMRSCRLGATN*DYSEEQ Trigger: TTGCTCTTCAGAATAATCCCAATTGGTGGCTCCTAA...CCTACATGACCTCATCCTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR TCA 90 bp | GCTGACTCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGCGTACTTTGCAGATTTaGCTTTTTGACCCTTATAAC | + |
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Preference number: 4 (lower is better) Translates to: ADSTRQQAPIIISANTKRRTLQI*LFDPYN Trigger: GTTATAAGGGTCAAAAAGTCAAATCTGCAAAGTACG...CCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGAGTCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTTCTGCCTCCTTTGCAAATCAGGTGGTCAAAAGGATGAGGTCATGTAGGCGTACTTTGCAGATTTaGCTTTTTGACCCTTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: FFSASFANQVVKRMRSCRRTLQI*LFDPYN Trigger: GTTATAAGGGTCAAAAAGTCAAATCTGCAAAGTACG...CCTACATGACCTCATCCTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCGTACTTTGCAGATTTaGCTTTTTGACCCTTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPATVKPLISQNVLKRLIRTLQI*LFDPYN Trigger: GTTATAAGGGTCAAAAAGTCAAATCTGCAAAGTACG...GATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTCTGCCTCCTTTGCAAATCAGGTGGTCAAAAGGATGAGGTCATGTAGGTTCGATGTCACTAGGTaGATGAGAATCAAATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFSASFANQVVKRMRSCRFDVTR*MRIKSV Trigger: AACAGATTTGATTCTCATGCACCTAGTGACATCGAA...CCTACATGACCTCATCCTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCTTCGATGTCACTAGGTaGATGAGAATCAAATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VPATVKPLISQNVLKRLIFDVTR*MRIKSV Trigger: AACAGATTTGATTCTCATGCACCTAGTGACATCGAA...GATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGATTAATCCCAGAAGAAGGTTTTATTGACAGTTTGGTTCTTTTCTGCCTCTCAAGAGACAGGTACTaGCAATGGATATACTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLIPEEGFIDSLVLFCLSRDRY*QWIYSG Trigger: GCCGGAGTATATCCATTGGCAGTACCTGTCTCTTGA...GAGGCAGAAAAGAACCAAACTGTCAATAAAACCTTCTTCTGGGATTAATCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR GCA 90 bp | TCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGAAACGGGTAGCCAACGTACTTTaGAGATTTGACTTTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: STRQQAPIIISANTKRKRVANVL*RFDFLT Trigger: GGTCAAAAAGTCAAATCTGCAAAGTACGTTGGCTAC...CCGTTTCCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCTATTATAGCCATGATTCCAAACCAGATAAAGACAATACAACAGAAATGGGACAGGTACTGCCAATaGATATACTCCGGCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: EAIIAMIPNQIKTIQQKWDRYCQ*IYSGQL Trigger: GAGTTGGCCGGAGTATATCCATTGGCAGTACCTGTC...CCATTTCTGTTGTATTGTCTTTATCTGGTTTGGAATCATGGCTATAATAGCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | GCTGACTCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGTGCAGCCTTGTAAGATaGAAGAGAGAGTATAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ADSTRQQAPIIISANTKRCSLVR*KREYKN Trigger: GTTTTTATACTCTCTCTTCCATCTTACAAGGCTGCA...CCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGAGTCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | GTCCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCTGCAGCCTTGTAAGATaGAAGAGAGAGTATAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPATVKPLISQNVLKRLICSLVR*KREYKN Trigger: GTTTTTATACTCTCTCTTCCATCTTACAAGGCTGCA...GATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | GTACAAATATCTCAGTGGTATGATGTAGAGTTCTCTGGGCATATGTGCAGAAGTGTAGCCAACGTACTTTaGAGATTTGACTTTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VQISQWYDVEFSGHMCRSVANVL*RFDFLT Trigger: GGTCAAAAAGTCAAATCTGCAAAGTACGTTGGCTAC...ACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | TCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGAAACGGTGCAGCCTTGTAAGATaGAAGAGAGAGTATAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: STRQQAPIIISANTKRKRCSLVR*KREYKN Trigger: GTTTTTATACTCTCTCTTCCATCTTACAAGGCTGCA...CCGTTTCCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR CCA 90 bp | GACTCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGAAATTAGGAGCCACCAATTaGGATTATTCTGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSTRQQAPIIISANTKRKLGATN*DYSEEQ Trigger: TTGCTCTTCAGAATAATCCCAATTGGTGGCTCCTAA...TTTCCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR CCA 90 bp | GTACAAATATCTCAGTGGTATGATGTAGAGTTCTCTGGGCATATGTGCAGAAGTTTAGGAGCCACCAATTaGGATTATTCTGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VQISQWYDVEFSGHMCRSLGATN*DYSEEQ Trigger: TTGCTCTTCAGAATAATCCCAATTGGTGGCTCCTAA...ACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR TCA 90 bp | GACTCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGAAACGTACTTTGCAGATTTaGCTTTTTGACCCTTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSTRQQAPIIISANTKRKRTLQI*LFDPYN Trigger: GTTATAAGGGTCAAAAAGTCAAATCTGCAAAGTACG...TTTCCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | GACTCAACCAGGCAACAAGCTCCCATAATCATTTCGGCTAATACAAAAAGGAAATGCAGCCTTGTAAGATaGAAGAGAGAGTATAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSTRQQAPIIISANTKRKCSLVR*KREYKN Trigger: GTTTTTATACTCTCTCTTCCATCTTACAAGGCTGCA...TTTCCTTTTTGTATTAGCCGAAATGATTATGGGAGCTTGTTGCCTGGTTGAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | AAGAGATTAATCCCAGAAGAAGGTTTTATTGACAGTTTGGTTCTTTTCTGCCTCGTAGCCAACGTACTTTaGAGATTTGACTTTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KRLIPEEGFIDSLVLFCLVANVL*RFDFLT Trigger: GGTCAAAAAGTCAAATCTGCAAAGTACGTTGGCTAC...GAGGCAGAAAAGAACCAAACTGTCAATAAAACCTTCTTCTGGGATTAATCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | AAGAGATTAATCCCAGAAGAAGGTTTTATTGACAGTTTGGTTCTTTTCTGCCTCTTAGGAGCCACCAATTaGGATTATTCTGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRLIPEEGFIDSLVLFCLLGATN*DYSEEQ Trigger: TTGCTCTTCAGAATAATCCCAATTGGTGGCTCCTAA...GAGGCAGAAAAGAACCAAACTGTCAATAAAACCTTCTTCTGGGATTAATCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGATTAATCCCAGAAGAAGGTTTTATTGACAGTTTGGTTCTTTTCTGCCTCCGTACTTTGCAGATTTaGCTTTTTGACCCTTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRLIPEEGFIDSLVLFCLRTLQI*LFDPYN Trigger: GTTATAAGGGTCAAAAAGTCAAATCTGCAAAGTACG...GAGGCAGAAAAGAACCAAACTGTCAATAAAACCTTCTTCTGGGATTAATCTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCTATTATAGCCATGATTCCAAACCAGATAAAGACAATACAACAGAAATGGGTAGCCAACGTACTTTaGAGATTTGACTTTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: EAIIAMIPNQIKTIQQKWVANVL*RFDFLT Trigger: GGTCAAAAAGTCAAATCTGCAAAGTACGTTGGCTAC...CCATTTCTGTTGTATTGTCTTTATCTGGTTTGGAATCATGGCTATAATAGCTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR CCA 90 bp | AAGAGATTAATCCCAGAAGAAGGTTTTATTGACAGTTTGGTTCTTTTCTGCCTCTGCAGCCTTGTAAGATaGAAGAGAGAGTATAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRLIPEEGFIDSLVLFCLCSLVR*KREYKN Trigger: GTTTTTATACTCTCTCTTCCATCTTACAAGGCTGCA...GAGGCAGAAAAGAACCAAACTGTCAATAAAACCTTCTTCTGGGATTAATCTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCTATTATAGCCATGATTCCAAACCAGATAAAGACAATACAACAGAAATGGTTAGGAGCCACCAATTaGGATTATTCTGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EAIIAMIPNQIKTIQQKWLGATN*DYSEEQ Trigger: TTGCTCTTCAGAATAATCCCAATTGGTGGCTCCTAA...CCATTTCTGTTGTATTGTCTTTATCTGGTTTGGAATCATGGCTATAATAGCTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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| CDS-3UTR GCA 90 bp | GAAGCTATTATAGCCATGATTCCAAACCAGATAAAGACAATACAACAGAAATGGTTCGATGTCACTAGGTaGATGAGAATCAAATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EAIIAMIPNQIKTIQQKWFDVTR*MRIKSV Trigger: AACAGATTTGATTCTCATGCACCTAGTGACATCGAA...CCATTTCTGTTGTATTGTCTTTATCTGGTTTGGAATCATGGCTATAATAGCTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCTATTATAGCCATGATTCCAAACCAGATAAAGACAATACAACAGAAATGGTGCAGCCTTGTAAGATaGAAGAGAGAGTATAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EAIIAMIPNQIKTIQQKWCSLVR*KREYKN Trigger: GTTTTTATACTCTCTCTTCCATCTTACAAGGCTGCA...CCATTTCTGTTGTATTGTCTTTATCTGGTTTGGAATCATGGCTATAATAGCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCAGCAACTGTGAAACCACTCATCAGCCAAAATGTGCTGAAGAGATTAATCCATCTTCGATTGGGCTaGATTCTCTTTAATTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPATVKPLISQNVLKRLIHLRLG*ILFNCG Trigger: GCCACAATTAAAGAGAATCAAGCCCAATCGAAGATG...GATTAATCTCTTCAGCACATTTTGGCTGATGAGTGGTTTCACAGTTGCTGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTCTGCCTCCTTTGCAAATCAGGTGGTCAAAAGGATGAGGTCATGTAGGCATCTTCGATTGGGCTaGATTCTCTTTAATTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FFSASFANQVVKRMRSCRHLRLG*ILFNCG Trigger: GCCACAATTAAAGAGAATCAAGCCCAATCGAAGATG...CCTACATGACCTCATCCTTTTGACCACCTGATTTGCAAAGGAGGCAGAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 |
||
| CDS-3UTR CAA 90 bp | GTACAAATATCTCAGTGGTATGATGTAGAGTTCTCTGGGCATATGTGCAGAAGTCATCTTCGATTGGGCTaGATTCTCTTTAATTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQISQWYDVEFSGHMCRSHLRLG*ILFNCG Trigger: GCCACAATTAAAGAGAATCAAGCCCAATCGAAGATG...ACTTCTGCACATATGCCCAGAGAACTCTACATCATACCACTGAGATATTTGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 |
||
| CDS GCA 90 bp | CAATGGATATACTCCGGCCAACTCTTTGAATGTACAAAATTAGTCTaGATCCCAAATCATTTAATAAGTGTGTCAAGCCAAAAGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QWIYSGQLFECTKLV*IPNHLISVSSQKLP Trigger: TGGCAGCTTTTGGCTTGACACACTTATTAAATGATTTGGGATGCAGACTAATTTTGTACATTCAAAGAGTTGGCCGGAGTATATCCATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCTATTATAGCCATGATTCCAAACCAGATAAAGACAATACAACAGAAATGGCATCTTCGATTGGGCTaGATTCTCTTTAATTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAIIAMIPNQIKTIQQKWHLRLG*ILFNCG Trigger: GCCACAATTAAAGAGAATCAAGCCCAATCGAAGATG...CCATTTCTGTTGTATTGTCTTTATCTGGTTTGGAATCATGGCTATAATAGCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 |
||
| CDS GCA 72 bp | TCCACTCAGGGGAGTTCCTGCTGGAAACATGAAAGCTaGGGATATGTTGAACCCTCTGCTTGTGTCTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: STQGSSCWKHES*GYVEPSACVCT Trigger: TGTACAGACACAAGCAGAGGGTTCAACATATCCGCAGCTTTCATGTTTCCAGCAGGAACTCCCCTGAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS GCA 72 bp | GACCCAGAGAAGGGACAAGGAGTAGCCAACGTACTTTaGAGATTTGACTTTTTGACCCTTATAACAAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: DPEKGQGVANVL*RFDFLTLITRF Trigger: GAATCTTGTTATAAGGGTCAAAAAGTCAAATCTGCAAAGTACGTTGGCTACTCCTTGTCCCTTCTCTGGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
||
| CDS GCA 72 bp | TACTCCGGCCAACTCTTTGAATGTACAAAATTAGTCTaGATCCCAAATCATTTAATAAGTGTGTCAAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: YSGQLFECTKLV*IPNHLISVSSQ Trigger: TTGGCTTGACACACTTATTAAATGATTTGGGATGCAGACTAATTTTGTACATTCAAAGAGTTGGCCGGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000163658.3 ENSMUST00000176284.9 ENSMUST00000176707.3 ENSMUST00000226160.2 ENSMUST00000226190.2 ENSMUST00000226228.2 ENSMUST00000227853.2 ENSMUST00000228296.2 ENSMUST00000228478.2 ENSMUST00000228638.2 |
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