Pregenerated sensors for VMN1R68 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047031Ensembl transcript IDs: ENSMUST00000058362.5, ENSMUST00000235324.2, ENSMUST00000236246.2, ENSMUST00000238003.2, ENSMUST00000238012.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGAAAGCAAGATGCTCCCAGGGCCCACCGAGGGTGTCAATAGCTaGAATATCCAAGAAAGGGGAGAGAGAACCAGTAGAGACCATATC | + |
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Preference number: 1 (lower is better) Translates to: QESKMLPGPTEGVNS*NIQERGERTSRDHI Trigger: GATATGGTCTCTACTGGTTCTCTCTCCCCTTTCTTGGATATTTCAGCTATTGACACCCTCGGTGGGCCCTGGGAGCATCTTGCTTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| 3UTR TCA 90 bp | CTGGGAGATGAGAGACTCTCAGAACTCAAACGGAGGGACCCTAGGTaGAATGTTTTAGAGTCGGGAGAGGGAACTTGTAGAACCCACGTC | + |
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Preference number: 1 (lower is better) Translates to: LGDERLSELKRRDPR*NVLESGEGTCRTHV Trigger: GACGTGGGTTCTACAAGTTCCCTCTCCCGACTCTAAAACATTTCACCTAGGGTCCCTCCGTTTGAGTTCTGAGAGTCTCTCATCTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR TCA 90 bp | ATAACCCTTAAGAGACCGGAGGCACCAGGGAGTTTAGTGGTCTGGTaGGATGATGGTGAGGTTGGGACATTTTCATGGAGACAGCGTGAT | + |
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Preference number: 1 (lower is better) Translates to: ITLKRPEAPGSLVVW*DDGEVGTFSWRQRD Trigger: ATCACGCTGTCTCCATGAAAATGTCCCAACCTCACCATCATCTCACCAGACCACTAAACTCCCTGGTGCCTCCGGTCTCTTAAGGGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR GCA 90 bp | AACCACCTACCACAGAATAAACATGGAGCAACTCATGGCTCCAGCTaGATATGTAGCAGAGGATCACCCTATCTGGCATCAGTGAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: NHLPQNKHGATHGSS*ICSRGSPYLASVRG Trigger: CCCTCTCACTGATGCCAGATAGGGTGATCCTCTGCTACATATGCAGCTGGAGCCATGAGTTGCTCCATGTTTATTCTGTGGTAGGTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| 3UTR CCA 90 bp | ACTGAAGCATTGAGGGCCAGCAGAAAGAATGGAAACAAGCAACATTaGGATCCTCCAGAGTGTACAAGAGACCTGGGAGATGAGAGACTC | + |
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Preference number: 1 (lower is better) Translates to: TEALRASRKNGNKQH*DPPECTRDLGDERL Trigger: GAGTCTCTCATCTCCCAGGTCTCTTGTACACTCTGGAGGATCCCAATGTTGCTTGTTTCCATTCTTTCTGCTGGCCCTCAATGCTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR CCA 90 bp | CCAATAAGAATGGGCAAGATCAAAACCTCAGGTGAGAGCACATGTTaGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PIRMGKIKTSGESTC*QGCGERGTFYHCWW Trigger: CCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGATCTTGCCCATTCTTATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR TCA 90 bp | ACTTGTAGAACCCACGTCCAGCAGAAAGACAAGGCATCAAGTGAGTaGTGGGGTCATTATCCCTCAGTCAAAACTCTGATCCATAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: TCRTHVQQKDKASSE*WGHYPSVKTLIHSC Trigger: ACAACTATGGATCAGAGTTTTGACTGAGGGATAATGACCCCATCACTCACTTGATGCCTTGTCTTTCTGCTGGACGTGGGTTCTACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR CCA 90 bp | TGTTGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTaGAATTGCAAACGGATACAACTGCTCTGTAAATCAATCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: CWQGCGERGTFYHCW*NCKRIQLLCKSIWR Trigger: CCTCCAGATTGATTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR GCA 90 bp | CAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTaGAAACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: QGCGERGTFYHCWWN*KRIQLLCKSIWRFF Trigger: GAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR GCA 90 bp | AGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTaGTGGTGGAATTGCAAACGGATACAACTGCTCTGTAAATCAATC | + |
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Preference number: 1 (lower is better) Translates to: STCWQGCGERGTFYH*WWNCKRIQLLCKSI Trigger: GATTGATTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR CCA 90 bp | ACATGTTGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTaGTGGAATTGCAAACGGATACAACTGCTCTGTAAATCAATCTGG | + |
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Preference number: 1 (lower is better) Translates to: TCWQGCGERGTFYHC*WNCKRIQLLCKSIW Trigger: CCAGATTGATTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCAACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR TCA 90 bp | ATTCTACCTTACACCAATAAGAATGGGCAAGATCAAAACCTCAGGTaGGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATTCTA | + |
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Preference number: 1 (lower is better) Translates to: ILPYTNKNGQDQNLR*EHMLARMWRKRNIL Trigger: TAGAATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGATCTTGCCCATTCTTATTGGTGTAAGGTAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR GCA 90 bp | AAGGGATGTGAAGATTCATCTTTAGTTAAGAGCACTTGCTGCTTTTaGAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGGCATTCA | + |
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Preference number: 1 (lower is better) Translates to: KGCEDSSLVKSTCCF*RGPRFHLAHNGWHS Trigger: TGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAAGCAGCAAGTGCTCTTAACTAAAGATGAATCTTCACATCCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR CCA 90 bp | TGCTGGTGGAATTGCAAACGGATACAACTGCTCTGTAAATCAATCTaGAGGTTCTTCAGAAAATCAGAAATACATCTACCTGAAGACCCA | + |
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Preference number: 1 (lower is better) Translates to: CWWNCKRIQLLCKSI*RFFRKSEIHLPEDP Trigger: TGGGTCTTCAGGTAGATGTATTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR GCA 90 bp | GAGGAACATTCTACCATTGCTGGTGGAATTGCAAACGGATACAACTaGTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAATAC | + |
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Preference number: 1 (lower is better) Translates to: EEHSTIAGGIANGYN*SVNQSGGSSENQKY Trigger: GTATTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR GCA 90 bp | ATATATAAGGGATGTGAAGATTCATCTTTAGTTAAGAGCACTTGCTaGTTTTGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: IYKGCEDSSLVKSTC*FCRGPRFHLAHNGW Trigger: CCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAAGCAGCAAGTGCTCTTAACTAAAGATGAATCTTCACATCCCTTATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR GCA 90 bp | AATTTAGAAGTCCATTATACCCCATCATATTTCTGTACTCTCTATTaGATCTCCATTTTCTCCCTAGAAACTCTTTGGCTGACTGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: NLEVHYTPSYFCTLY*ISIFSLETLWLTVF Trigger: AAACACAGTCAGCCAAAGAGTTTCTAGGGAGAAAATGGAGATGCAATAGAGAGTACAGAAATATGATGGGGTATAATGGACTTCTAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR TCA 90 bp | TTCTCAACTATTAAGAATGAGGACATCCTGAGTTTTGCAGTCAAATaGATGGAACTAGAAACTATTATCCTGAATCATGTAACTCAGACC | + |
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Preference number: 1 (lower is better) Translates to: FSTIKNEDILSFAVK*MELETIILNHVTQT Trigger: GGTCTGAGTTACATGATTCAGGATAATAGTTTCTAGTTCCATTCATTTGACTGCAAAACTCAGGATGTCCTCATTCTTAATAGTTGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACCCTGGAGGAGATCTCTCACACCCTGGATCACCAACCAGGCAGCATACAAGTTTAGTGGTCTGGTaGGATGATGGTGAGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LDPGGDLSHPGSPTRQHTSLVVW*DDGEVG Trigger: CCCAACCTCACCATCATCTCACCAGACCACTAAACT...TGTATGCTGCCTGGTTGGTGATCCAGGGTGTGAGAGATCTCCTCCAGGGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR TCA 90 bp | TTTACAGTAAAGAGCCCTGCCCTGGCATCCGGGCTCATGGACAACTCTTTTACAGGTCATGAAGGCTGCTaGTTCTACCATCCAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: FTVKSPALASGLMDNSFTGHEGC*FYHPAS Trigger: GCTTGCTGGATGGTAGAATCAGCAGCCTTCATGACC...TGTAAAAGAGTTGTCCATGAGCCCGGATGCCAGGGCAGGGCTCTTTACTGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACCCTGGAGGAGATCTCTCACACCCTGGATCACCAACCAGGCAGCATACAAATATCTCAGTGGTATaGTGTAGAGTTTTCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LDPGGDLSHPGSPTRQHTNISVV*CRVFWA Trigger: TGCCCAGAAAACTCTACATCATACCACTGAGATATT...TGTATGCTGCCTGGTTGGTGATCCAGGGTGTGAGAGATCTCCTCCAGGGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGGTTAAGAGCACTTGCTaGTTTTGCAGAGGACCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLVKSTC*FCRGPR Trigger: CCTTGGTCCTCTGCAAAAGCAGCAAGTGCTCTTAAC...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCACGAGTGATGACCAGGGTTTCCTGAACAAAAAGTTCACAATCACCCTTGGTCATGAAGGCTGCTaGTTCTACCATCCAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: WSTSDDQGFLNKKFTITLGHEGC*FYHPAS Trigger: GCTTGCTGGATGGTAGAATCAGCAGCCTTCATGACC...AAGGGTGATTGTGAACTTTTTGTTCAGGAAACCCTGGTCATCACTCGTGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000235324.2 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAACGGATACAACTGCTTCATGGAGACAGCGTaGTGGGGAGGAGGTATGGGA | + |
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Preference number: 2 (lower is better) Translates to: EKEEHSTIAGGIANGYNCFMETA*WGGGMG Trigger: TCCCATACCTCCTCCCCATCACGCTGTCTCCATGAA...GCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGTTTTGTTTCTGGATCTaGAGCACGAGTGATGACCAG | + |
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Preference number: 2 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLFCFWI*STSDDQ Trigger: CTGGTCATCACTCGTGCTCCAGATCCAGAAACAAAA...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGAAATATTACAAGGCATCAGGACTTTGTTCCTGTGGGCTGGGGGCTTATCACAGAGGGGAGGTTCTaGCCAGATGGTGACAACTCA | + |
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Preference number: 2 (lower is better) Translates to: NRNITRHQDFVPVGWGLITEGRF*PDGDNS Trigger: TGAGTTGTCACCATCTGGCCAGAACCTCCCCTCTGT...GATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCTTGTAATATTTCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTTAAGGGAAGAACTGAAAGAGCTGAAGGGGTTTGTAACCCTATAGAAAGAGGAATTCTAGGGTGGTaGGGCAGGAGTAGGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: GVKGRTERAEGVCNPIERGILGW*GRSRGT Trigger: TGTTCCCCTACTCCTGCCTCACCACCCTAGAATTCC...TCTTTCTATAGGGTTACAAACCCCTTCAGCTCTTTCAGTTCTTCCCTTAACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTTAAGGGAAGAACTGAAAGAGCTGAAGGGGTTTGTAACCCTATAGAAAGACCTATCTGGCATCAGTaGGAGGGGAGGCCTTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: GVKGRTERAEGVCNPIERPIWHQ*EGRPLV Trigger: AACCAAAGGCCTCCCCTCTCACTGATGCCAGATAGG...TCTTTCTATAGGGTTACAAACCCCTTCAGCTCTTTCAGTTCTTCCCTTAACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAACCTCAGGTGAGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATGACAGACTGAAGCATTaGGGGCCAGCAGAAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: SKPQVRAHVGKDVEKEEHDRLKH*GPAERM Trigger: CATTCTTTCTGCTGGCCCTCAATGCTTCAGTCTGTC...ATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR TCA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGACTCTCATGTCATTTTaGCCTTTGTTAGTTCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLTLMSF*PLLVLG Trigger: GCCGAGAACTAACAAAGGTCAAAATGACATGAGAGT...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGACCCTGGAGGAGATCTCTCACACCCTGGATCACCAACCAGGCAGCATACAATTAATCAGCCAAAATaGAATGAAGAGGAATCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LDPGGDLSHPGSPTRQHTINQPK*NEEESQ Trigger: TTGGGATTCCTCTTCATTGCATTTTGGCTGATTAAT...TGTATGCTGCCTGGTTGGTGATCCAGGGTGTGAGAGATCTCCTCCAGGGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGTTAAGGGAAGAACTGAAAGAGCTGAAGGGGTTTGTAACCCTATAGAAAGAATCCCTGGAGCTCTCTaGATTGACTGTGGGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GVKGRTERAEGVCNPIERIPGAL*IDCGAA Trigger: AGCTGCCCCACAGTCAATGCAGAGAGCTCCAGGGAT...TCTTTCTATAGGGTTACAAACCCCTTCAGCTCTTTCAGTTCTTCCCTTAACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGCAAGATAGCCTTGCCTaGTTCCTTGCATTCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLQDSLA*FLAFFF Trigger: GAAAAAGAATGCAAGGAAGCAGGCAAGGCTATCTTG...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGAGACAGGGGAGAGGTAAAGATGGTCAGGAAATTAAACAGAGGTACATCCCAAGAAGTGCTTGCTaGCAGGAGACTGATATAGAT | + |
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Preference number: 2 (lower is better) Translates to: GRRQGRGKDGQEIKQRYIPRSAC*QETDID Trigger: ATCTATATCAGTCTCCTGTCAGCAAGCACTTCTTGG...GATGTACCTCTGTTTAATTTCCTGACCATCTTTACCTCTCCCCTGTCTCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAACCTCAGGTGAGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATAGACAAGGCATCAAGTaGGTGATGGGGTCATTATCC | + |
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Preference number: 2 (lower is better) Translates to: SKPQVRAHVGKDVEKEEHRQGIK*VMGSLS Trigger: GGATAATGACCCCATCACTCACTTGATGCCTTGTCT...ATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAACCTCAGGTGAGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATAAGAGACCTGGGAGATaGGAGACTCTCAGAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: SKPQVRAHVGKDVEKEEHKRPGR*ETLRTQ Trigger: TTGAGTTCTGAGAGTCTCTCATCTCCCAGGTCTCTT...ATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGCCTTGCCTGCTTCCTTaGATTCTTTTTCATCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLPCLLP*ILFHLY Trigger: GTAAAGATGAAAAAGAATGCAAGGAAGCAGGCAAGG...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGAGACAGGGGAGAGGTAAAGATGGTCAGGAAATTAAACAGAGGTACATCTTTTGTTTCTGGATCTaGAGCACGAGTGATGACCAG | + |
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Preference number: 2 (lower is better) Translates to: GRRQGRGKDGQEIKQRYIFCFWI*STSDDQ Trigger: CTGGTCATCACTCGTGCTCCAGATCCAGAAACAAAA...GATGTACCTCTGTTTAATTTCCTGACCATCTTTACCTCTCCCCTGTCTCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAACGGATACAACTGCGATGGGGAGGAGGTATaGGATGTGGAACAGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: EKEEHSTIAGGIANGYNCDGEEV*DVEQSK Trigger: CTTTGACTGTTCCACATCCCATACCTCCTCCCCATC...GCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCACGAGTGATGACCAGGGTTTCCTGAACAAAAAGTTCACAATCACCCTTAAAGGAATGAGGTCATaGAGGCTGCTGATTCTACCA | + |
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Preference number: 2 (lower is better) Translates to: WSTSDDQGFLNKKFTITLKGMRS*RLLILP Trigger: TGGTAGAATCAGCAGCCTTCATGACCTCATTCCTTT...AAGGGTGATTGTGAACTTTTTGTTCAGGAAACCCTGGTCATCACTCGTGCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000235324.2 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| 3UTR-3UTR TCA 90 bp | TTTACAGTAAAGAGCCCTGCCCTGGCATCCGGGCTCATGGACAACTCTTTTACAATGACCAGGGTTTCCTaGACAAAAAGTTCACAATCA | + |
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Preference number: 2 (lower is better) Translates to: FTVKSPALASGLMDNSFTMTRVS*TKSSQS Trigger: TGATTGTGAACTTTTTGTTCAGGAAACCCTGGTCAT...TGTAAAAGAGTTGTCCATGAGCCCGGATGCCAGGGCAGGGCTCTTTACTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGTGAAATAGAGACTGAAGGAAAGGCCATCCAGAGACTGCCCTACCTAGGAATGGAGGGTTCCTCGTaGTTCTTGAATGTTTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: KSEIETEGKAIQRLPYLGMEGSS*FLNVSG Trigger: ACCTGAAACATTCAAGAATCACGAGGAACCCTCCAT...TCCTAGGTAGGGCAGTCTCTGGATGGCCTTTCCTTCAGTCTCTATTTCACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAACCTCAGGTGAGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATCCTCAGTCAAAACTCTaGTCCATAGTTGTTCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SKPQVRAHVGKDVEKEEHPQSKL*SIVVPV Trigger: GACAGGAACAACTATGGATCAGAGTTTTGACTGAGG...ATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAACCTCAGGTGAGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATTTTTGTTTCTGGATCTaGAGCACGAGTGATGACCAG | + |
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Preference number: 2 (lower is better) Translates to: SKPQVRAHVGKDVEKEEHFCFWI*STSDDQ Trigger: CTGGTCATCACTCGTGCTCCAGATCCAGAAACAAAA...ATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGTGCATGCAGTGTATGTaGCAAACACTAAAACACATA | + |
|
Preference number: 2 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLCMQCM*QTLKHI Trigger: TATGTGTTTTAGTGTTTGCCACATACACTGCATGCA...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAGAAATATTACAAGGCATCAGGACTTTGTTCCTGTGGGCTGGGGGCTTATCTGGCATCCGGGCTCATaGACAACTCTTTTACATGAA | + |
|
Preference number: 2 (lower is better) Translates to: NRNITRHQDFVPVGWGLIWHPGS*TTLLHE Trigger: TTCATGTAAAAGAGTTGTCCATGAGCCCGGATGCCA...GATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCTTGTAATATTTCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR CAA 90 bp | TCCAGAATCTTTTCAGAAAGCACATTACCAAGTGAGCCAGTTCCATaGCCAAGATTTCATAAGATACCTGGAGAGGAGGATGTCCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SRIFSESTLPSEPVP*PRFHKIPGEEDVLG Trigger: CCCAAGGACATCCTCCTCTCCAGGTATCTTATGAAATCTTGGCAATGGAACTGGCTCACTTGGTAATGTGCTTTCTGAAAAGATTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGGCATTCACATATAGGTCATGAAGGCTGCTaGTTCTACCATCCAGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FCRGPRFHLAHNGWHSHIGHEGC*FYHPAS Trigger: GCTTGCTGGATGGTAGAATCAGCAGCCTTCATGACC...TATATGTGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCACCCTTCTCAAAAATATTAACCCAGAGTTACTCTTGGCTAAAGGAAATACAGGTCATGAAGGCTGCTaGTTCTACCATCCAGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: PTLLKNINPELLLAKGNTGHEGC*FYHPAS Trigger: GCTTGCTGGATGGTAGAATCAGCAGCCTTCATGACC...TGTATTTCCTTTAGCCAAGAGTAACTCTGGGTTAATATTTTTGAGAAGGGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGGAGACAGGGGAGAGGTAAAGATGGTCAGGAAATTAAACAGAGGTACATCATGACCAGGGTTTCCTaGACAAAAAGTTCACAATCA | + |
|
Preference number: 2 (lower is better) Translates to: GRRQGRGKDGQEIKQRYIMTRVS*TKSSQS Trigger: TGATTGTGAACTTTTTGTTCAGGAAACCCTGGTCAT...GATGTACCTCTGTTTAATTTCCTGACCATCTTTACCTCTCCCCTGTCTCCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR TCA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAAAAGGCTGGAAGAAGCTaGGGAGGAGGGCAACCATGT | + |
|
Preference number: 2 (lower is better) Translates to: NGYNCSVNQSGGSSENQKKAGRS*GGGQPC Trigger: ACATGGTTGCCCTCCTCCTCAGCTTCTTCCAGCCTT...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR GCA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGATTAATCAGCCAAAATaGAATGAAGAGGAATCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLINQPK*NEEESQ Trigger: TTGGGATTCCTCTTCATTGCATTTTGGCTGATTAAT...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGAAATATTACAAGGCATCAGGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTCCACCTAATCCAATaGCTTCATGACACAGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: NRNITRHQDFVPVGWGLIFHLIQ*LHDTDC Trigger: ACAGTCTGTGTCATGAAGGCATTGGATTAGGTGGAA...GATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCTTGTAATATTTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCACCCTTCTCAAAAATATTAACCCAGAGTTACTCTTGGCTAAAGGAAATACAAGCCAATCATTGGACTaGGCAATAGGACCCCAATGG | + |
|
Preference number: 2 (lower is better) Translates to: PTLLKNINPELLLAKGNTSQSLD*AIGPQW Trigger: CCATTGGGGTCCTATTGCTCAGTCCAATGATTGGCT...TGTATTTCCTTTAGCCAAGAGTAACTCTGGGTTAATATTTTTGAGAAGGGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAACGGATACAACTGCAGAAGACAGAAGATGTaGATAACCCTTAAGAGACCG | + |
|
Preference number: 2 (lower is better) Translates to: EKEEHSTIAGGIANGYNCRRQKM*ITLKRP Trigger: CGGTCTCTTAAGGGTTATTCACATCTTCTGTCTTCT...GCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAACCTCAGGTGAGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATCCAAAAGATCCAAGCTaGAAGAGTCAGATCCATATA | + |
|
Preference number: 2 (lower is better) Translates to: SKPQVRAHVGKDVEKEEHPKDPS*KSQIHI Trigger: TATATGGATCTGACTCTTTCAGCTTGGATCTTTTGG...ATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGATAATTCCTATGTTCTCTGTATTCTACTCTGAATTCTTTGCTCCCCATGTCCGGAGGGACCCTAGGTaGAATGTTTTAGAGTCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LIIPMFSVFYSEFFAPHVRRDPR*NVLESG Trigger: TCCCGACTCTAAAACATTTCACCTAGGGTCCCTCCG...GACATGGGGAGCAAAGAATTCAGAGTAGAATACAGAGAACATAGGAATTATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTTAAGGGAAGAACTGAAAGAGCTGAAGGGGTTTGTAACCCTATAGAAAGAGGTTTGGTGAAGTCTTaGTTTTCCAGAGTAGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GVKGRTERAEGVCNPIERGLVKS*FSRVGE Trigger: TTCCCCTACTCTGGAAAACCAAGACTTCACCAAACC...TCTTTCTATAGGGTTACAAACCCCTTCAGCTCTTTCAGTTCTTCCCTTAACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAACCTCAGGTGAGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATTGTATCAATCCTACATaGGAGGGAGGAGAAAACAAT | + |
|
Preference number: 2 (lower is better) Translates to: SKPQVRAHVGKDVEKEEHCINPT*EGGENN Trigger: ATTGTTTTCTCCTCCCTCCCATGTAGGATTGATACA...ATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTACAGTAAAGAGCCCTGCCCTGGCATCCGGGCTCATGGACAACTCTTTTACATTAGCACATAATGGCTaGCATTCACATATAACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: FTVKSPALASGLMDNSFTLAHNG*HSHITL Trigger: AAGAGTTATATGTGAATGCCAGCCATTATGTGCTAA...TGTAAAAGAGTTGTCCATGAGCCCGGATGCCAGGGCAGGGCTCTTTACTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTACAGTAAAGAGCCCTGCCCTGGCATCCGGGCTCATGGACAACTCTTTTACAAATGCAAACCTTACTTaGTGTGTCATTCATAAAACG | + |
|
Preference number: 2 (lower is better) Translates to: FTVKSPALASGLMDNSFTNANLT*CVIHKT Trigger: CGTTTTATGAATGACACACCAAGTAAGGTTTGCATT...TGTAAAAGAGTTGTCCATGAGCCCGGATGCCAGGGCAGGGCTCTTTACTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR CAA 90 bp | TTCCATTGCCAAGATTTCATAAGATACCTGGAGAGGAGGATGTCCTaGGGTCTGCTGATAAACAGTTCCCTCTTGAAGTTTGTTCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FHCQDFIRYLERRMS*GLLINSSLLKFVLV Trigger: AACAAGAACAAACTTCAAGAGGGAACTGTTTATCAGCAGACCCAAGGACATCCTCCTCTCCAGGTATCTTATGAAATCTTGGCAATGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAAATGACCAGGGTTTCCTaGACAAAAAGTTCACAATCA | + |
|
Preference number: 2 (lower is better) Translates to: WQGCGERGTFYHCWWNCKMTRVS*TKSSQS Trigger: TGATTGTGAACTTTTTGTTCAGGAAACCCTGGTCAT...TTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR TCA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAAGCAGCATACACCAGCTaGCATGAGATCCCTAACACA | + |
|
Preference number: 2 (lower is better) Translates to: NGYNCSVNQSGGSSENQKAAYTS*HEIPNT Trigger: TGTGTTAGGGATCTCATGTCAGCTGGTGTATGCTGC...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAGAAATATTACAAGGCATCAGGACTTTGTTCCTGTGGGCTGGGGGCTTATCTGCATGCAGTGTATGTaGCAAACACTAAAACACATA | + |
|
Preference number: 2 (lower is better) Translates to: NRNITRHQDFVPVGWGLICMQCM*QTLKHI Trigger: TATGTGTTTTAGTGTTTGCCACATACACTGCATGCA...GATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCTTGTAATATTTCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR CAA 90 bp | CTTATAGCCATCTGTAACCGAAGTTTTAAGCACTCTCATGTCATTTaGACCTTTGTTAGTTCTCGGCATGCATGCAGTGTATGTGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LIAICNRSFKHSHVI*TFVSSRHACSVCGK Trigger: TTTGCCACATACACTGCATGCATGCCGAGAACTAACAAAGGTCAAAATGACATGAGAGTGCTTAAAACTTCGGTTACAGATGGCTATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR GCA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAAAATTTACCCAAAATATaGCCCACCCTGTCACAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NGYNCSVNQSGGSSENQKNLPKI*PTLSQG Trigger: CCCCTGTGACAGGGTGGGGCATATTTTGGGTAAATT...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATCTTTAGTTAAGAGCACTTGCTGCTTTTGCAGAGGACCAAGGTTTCATTTATTTTGTTTCTGGATCTaGAGCACGAGTGATGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSLVKSTCCFCRGPRFHLFCFWI*STSDDQ Trigger: CTGGTCATCACTCGTGCTCCAGATCCAGAAACAAAA...TAAATGAAACCTTGGTCCTCTGCAAAAGCAGCAAGTGCTCTTAACTAAAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR CCA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAACAGTCTCAATTAACCTaGACCCTGGAGGAGATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: NGYNCSVNQSGGSSENQKQSQLT*TLEEIS Trigger: AGAGATCTCCTCCAGGGTCCAGGTTAATTGAGACTG...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGATAATTCCTATGTTCTCTGTATTCTACTCTGAATTCTTTGCTCCCCATGTCGGTGAGAGCACATGTTaGCAAGGATGTGGAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LIIPMFSVFYSEFFAPHVGESTC*QGCGER Trigger: TCTTTCTCCACATCCTTGCCAACATGTGCTCTCACC...GACATGGGGAGCAAAGAATTCAGAGTAGAATACAGAGAACATAGGAATTATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGGCATTCACATATATTCCACCTAATCCAATaGCTTCATGACACAGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: FCRGPRFHLAHNGWHSHIFHLIQ*LHDTDC Trigger: ACAGTCTGTGTCATGAAGGCATTGGATTAGGTGGAA...TATATGTGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATAATTCCTATGTTCTCTGTATTCTACTCTGAATTCTTTGCTCCCCATGTCGGAAACAAGCAACATTaGGATCCTCCAGAGTGTACA | + |
|
Preference number: 2 (lower is better) Translates to: LIIPMFSVFYSEFFAPHVGNKQH*DPPECT Trigger: TGTACACTCTGGAGGATCCCAATGTTGCTTGTTTCC...GACATGGGGAGCAAAGAATTCAGAGTAGAATACAGAGAACATAGGAATTATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CCA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAAGGCCAGCAGAAAGAATaGAAACAAGCAACATTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NGYNCSVNQSGGSSENQKGQQKE*KQATLG Trigger: TCCCAATGTTGCTTGTTTCCATTCTTTCTGCTGGCC...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR CAA 90 bp | TTAGAAGAGTCTACAGCTTCAGACTATGCACAGATTCATGTATTGTaGCCTAGAAAAGGAGAACTAAGCATAGCATGCTATCCATCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LEESTASDYAQIHVL*PRKGELSIACYPSD Trigger: ATCAGATGGATAGCATGCTATGCTTAGTTCTCCTTTTCTAGGCAACAATACATGAATCTGTGCATAGTCTGAAGCTGTAGACTCTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGGCATTCACATATAAATATCTCAGTGGTATaGTGTAGAGTTTTCTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FCRGPRFHLAHNGWHSHINISVV*CRVFWA Trigger: TGCCCAGAAAACTCTACATCATACCACTGAGATATT...TATATGTGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATCATTTTCTTTGGACTTTGTAGCAACCAGTAGATTTCACACTCTAGTGGATAATATCTCAGTGGTATaGTGTAGAGTTTTCTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ASFSLDFVATSRFHTLVDNISVV*CRVFWA Trigger: TGCCCAGAAAACTCTACATCATACCACTGAGATATT...ATCCACTAGAGTGTGAAATCTACTGGTTGCTACAAAGTCCAAAGAAAATGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
||
| 3UTR-3UTR TCA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAAATAGTTGTTCCTGTCTaGAAGAACTGCAGAGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: NGYNCSVNQSGGSSENQKIVVPV*KNCRDG Trigger: TCCATCTCTGCAGTTCTTTCAGACAGGAACAACTAT...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAACGGATACAACTGCTCTCTCTTTCATAACTCATaGATTCTTTACTTACCCATC | + |
|
Preference number: 2 (lower is better) Translates to: KEEHSTIAGGIANGYNCSLFHNS*ILYLPI Trigger: GATGGGTAAGTAAAGAATCCATGAGTTATGAAAGAG...AGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGATAATTCCTATGTTCTCTGTATTCTACTCTGAATTCTTTGCTCCCCATGTCAAAAATGATCTGGTATaGGTTGGTGGACAGACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LIIPMFSVFYSEFFAPHVKNDLV*VGGQTE Trigger: TTCAGTCTGTCCACCAACTCATACCAGATCATTTTT...GACATGGGGAGCAAAGAATTCAGAGTAGAATACAGAGAACATAGGAATTATCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR TCA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAAAGAATGAGGACATCCTaGGTTTTGCAGTCAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: NGYNCSVNQSGGSSENQKRMRTS*VLQSNE Trigger: TTCATTTGACTGCAAAACTCAGGATGTCCTCATTCT...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGTTACTCTTGGCTAAAGGAAATACAAGGACAAAAAGTGAAATAGAGACTGTGAGCCAGTTCCATTaGCAAGATTTCATAAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: PELLLAKGNTRTKSEIETVSQFH*QDFIRY Trigger: GTATCTTATGAAATCTTGGCAATGGAACTGGCTCAC...AGTCTCTATTTCACTTTTTGTCCTTGTATTTCCTTTAGCCAAGAGTAACTCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGTTACTCTTGGCTAAAGGAAATACAAGGACAAAAAGTGAAATAGAGACTATTAATCAGCCAAAATaGAATGAAGAGGAATCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: PELLLAKGNTRTKSEIETINQPK*NEEESQ Trigger: TTGGGATTCCTCTTCATTGCATTTTGGCTGATTAAT...AGTCTCTATTTCACTTTTTGTCCTTGTATTTCCTTTAGCCAAGAGTAACTCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR CCA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAACAAATCGCATTTTTATaGCTGTATCCTCCAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: NGYNCSVNQSGGSSENQKQIAFL*LYPPEK Trigger: TTTTTCTGGAGGATACAGCCATAAAAATGCGATTTG...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGATAATTCCTATGTTCTCTGTATTCTACTCTGAATTCTTTGCTCCCCATGTCCAGCAATATCACTCTTaGGAATTTACCCAAAATATG | + |
|
Preference number: 2 (lower is better) Translates to: LIIPMFSVFYSEFFAPHVQQYHS*EFTQNM Trigger: CATATTTTGGGTAAATTCCCAAGAGTGATATTGCTG...GACATGGGGAGCAAAGAATTCAGAGTAGAATACAGAGAACATAGGAATTATCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR TCA 72 bp | GGGGCAATAGACAGAGGGGAGGTTCTGGCCAGATGGTaGCAACTCAGACAAGATAGCCTTGCCTGCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GAIDRGEVLARW*QLRQDSLACFL Trigger: AAGGAAGCAGGCAAGGCTATCTTGTCTGAGTTGTCACCATCTGGCCAGAACCTCCCCTCTGTCTATTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR GCA 72 bp | CCACATAGCAACCAGTTGATGTATGACTTTACCCAGTaGCAAGGGGCAATAGACAGAGGGGAGGTTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PHSNQLMYDFTQ*QGAIDRGEVLA Trigger: GGCCAGAACCTCCCCTCTGTCTATTGCCCCTTGGCACTGGGTAAAGTCATACATCAACTGGTTGCTATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR CCA 72 bp | CATGGAGACAGCGTGATGGGGAGGAGGTATGGGATGTaGAACAGTCAAAGGGTAGACTGGGAGGGCAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: HGDSVMGRRYGM*NSQRVDWEGNK Trigger: TTTATTGCCCTCCCAGTCTACCCTTTGACTGTTCCACATCCCATACCTCCTCCCCATCACGCTGTCTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR TCA 72 bp | AAGATGCTCCCAGGGCCCACCGAGGGTGTCAATAGCTaGAATATCCAAGAAAGGGGAGAGAGAACCAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KMLPGPTEGVNS*NIQERGERTSR Trigger: TCTACTGGTTCTCTCTCCCCTTTCTTGGATATTTCAGCTATTGACACCCTCGGTGGGCCCTGGGAGCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR TCA 72 bp | AAGAGACCGGAGGCACCAGGGAGTTTAGTGGTCTGGTaGGATGATGGTGAGGTTGGGACATTTTCATGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KRPEAPGSLVVW*DDGEVGTFSWR Trigger: TCTCCATGAAAATGTCCCAACCTCACCATCATCTCACCAGACCACTAAACTCCCTGGTGCCTCCGGTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR GCA 72 bp | GAGGCTCTACCAGAGCATTACCAGTACAGATGCTGCTaGTTGCAGCCAATCATTGGACTGAGCAATAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: EALPEHYQYRCC*LQPIIGLSNRT Trigger: GGTCCTATTGCTCAGTCCAATGATTGGCTGCAAGCAGCAGCATCTGTACTGGTAATGCTCTGGTAGAGCCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR CCA 72 bp | AGCAACATTGGGATCCTCCAGAGTGTACAAGAGACCTaGGAGATGAGAGACTCTCAGAACTCAAACGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SNIGILQSVQET*EMRDSQNSNGG Trigger: CCCTCCGTTTGAGTTCTGAGAGTCTCTCATCTCCCAGGTCTCTTGTACACTCTGGAGGATCCCAATGTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR TCA 72 bp | GACTCAAAGAACTGTCATCCCTGGAGCTCTCTGCATTaGCTGTGGGGCAGCTCAACCGTTCATAGAATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DSKNCHPWSSLH*LWGSSTVHRIE Trigger: CTCTATTCTATGAACGGTTGAGCTGCCCCACAGTCAATGCAGAGAGCTCCAGGGATGACAGTTCTTTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR GCA 72 bp | GTGATGACTCAAAGAACTGTCATCCCTGGAGCTCTCTaGATTGACTGTGGGGCAGCTCAACCGTTCATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VMTQRTVIPGAL*IDCGAAQPFIE Trigger: TTCTATGAACGGTTGAGCTGCCCCACAGTCAATGCAGAGAGCTCCAGGGATGACAGTTCTTTGAGTCATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR TCA 72 bp | GAGAGACTCTCAGAACTCAAACGGAGGGACCCTAGGTaGAATGTTTTAGAGTCGGGAGAGGGAACTTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ERLSELKRRDPR*NVLESGEGTCR Trigger: TCTACAAGTTCCCTCTCCCGACTCTAAAACATTTCACCTAGGGTCCCTCCGTTTGAGTTCTGAGAGTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR GCA 72 bp | CCACAGAATAAACATGGAGCAACTCATGGCTCCAGCTaGATATGTAGCAGAGGATCACCCTATCTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: PQNKHGATHGSS*ICSRGSPYLAS Trigger: TGATGCCAGATAGGGTGATCCTCTGCTACATATGCAGCTGGAGCCATGAGTTGCTCCATGTTTATTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTGAAATAGAGACTGAAGGAAAGGCCATCCAGAGACTGCCCTACCTAGGAGAGAGGAGGATGTCCTaGGGTCTGCTGATAAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: KSEIETEGKAIQRLPYLGERRMS*GLLINS Trigger: ACTGTTTATCAGCAGACCCAAGGACATCCTCCTCTC...TCCTAGGTAGGGCAGTCTCTGGATGGCCTTTCCTTCAGTCTCTATTTCACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGCACTCTCATGTCATTTaGACCTTTGTTAGTTCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLHSHVI*TFVSSR Trigger: CCGAGAACTAACAAAGGTCAAAATGACATGAGAGTG...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGGGAATTACTCATTTTTaGTTTCTGGATCTGGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLGITHF*FLDLEH Trigger: GTGCTCCAGATCCAGAAACAAAAAATGAGTAATTCC...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAAGGACAGACTGAAGCATaGAGGGCCAGCAGAAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: WQGCGERGTFYHCWWNCKGQTEA*RASRKN Trigger: ATTCTTTCTGCTGGCCCTCAATGCTTCAGTCTGTCC...TTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGCCAGAGGACATGGATTaGATTCCCTTAACATTTATG | + |
|
Preference number: 3 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLPEDMD*IPLTFM Trigger: CATAAATGTTAAGGGAATCAAATCCATGTCCTCTGG...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR GCA 72 bp | CCTTGCATTCTTTTTCATCTTTACAGTAAAGAGCCCTaGCCTGGCATCCGGGCTCATGGACAACTCTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PCILFHLYSKEP*PGIRAHGQLFY Trigger: GTAAAAGAGTTGTCCATGAGCCCGGATGCCAGGGCAGGGCTCTTTACTGTAAAGATGAAAAAGAATGCAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAAGAGATGATGGTGAGGTaGGGACATTTTCATGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: WQGCGERGTFYHCWWNCKEMMVR*GHFHGD Trigger: GTCTCCATGAAAATGTCCCAACCTCACCATCATCTC...TTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAATGGAAACAAGCAACATaGGGATCCTCCAGAGTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: WQGCGERGTFYHCWWNCKWKQAT*GSSRVY Trigger: GTACACTCTGGAGGATCCCAATGTTGCTTGTTTCCA...TTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTACAGTAAAGAGCCCTGCCCTGGCATCCGGGCTCATGGACAACTCTTTTACACCAGAGGACATGGATTaGATTCCCTTAACATTTATG | + |
|
Preference number: 3 (lower is better) Translates to: FTVKSPALASGLMDNSFTPEDMD*IPLTFM Trigger: CATAAATGTTAAGGGAATCAAATCCATGTCCTCTGG...TGTAAAAGAGTTGTCCATGAGCCCGGATGCCAGGGCAGGGCTCTTTACTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR TCA 72 bp | ACCCCATATATAGACACCAAACCCAGATGCTATTGCTaGTGCCAAGAAGTGCTTGCTGACAGGAGACTGATA | + |
|
Preference number: 3 (lower is better) Translates to: TPYIDTKPRCYC*CQEVLADRRLI Trigger: TATCAGTCTCCTGTCAGCAAGCACTTCTTGGCATCAGCAATAGCATCTGGGTTTGGTGTCTATATATGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR TCA 72 bp | TACACCAATAAGAATGGGCAAGATCAAAACCTCAGGTaGGAGCACATGTTGGCAAGGATGTGGAGAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: YTNKNGQDQNLR*EHMLARMWRKR Trigger: CCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGATCTTGCCCATTCTTATTGGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR CCA 72 bp | ATGGGCAAGATCAAAACCTCAGGTGAGAGCACATGTTaGCAAGGATGTGGAGAAAGAGGAACATTCTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: MGKIKTSGESTC*QGCGERGTFYH Trigger: ATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGATCTTGCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAGGAGGATGTCCTTGGGTCTGCTGATAAACAGTTCCCTCTTGAAGTTTGTGGAATTACTCATTTTTaGTTTCTGGATCTGGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GEEDVLGSADKQFPLEVCGITHF*FLDLEH Trigger: GTGCTCCAGATCCAGAAACAAAAAATGAGTAATTCC...ACAAACTTCAAGAGGGAACTGTTTATCAGCAGACCCAAGGACATCCTCCTCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGAAATATTACAAGGCATCAGGACTTTGTTCCTGTGGGCTGGGGGCTTATCGCCTTGCCTGCTTCCTaGCATTCTTTTTCATCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: NRNITRHQDFVPVGWGLIALPAS*HSFSSL Trigger: TAAAGATGAAAAAGAATGCAAGGAAGCAGGCAAGGC...GATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCTTGTAATATTTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTGAAATAGAGACTGAAGGAAAGGCCATCCAGAGACTGCCCTACCTAGGAAGTGAGCCAGTTCCATaGCCAAGATTTCATAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: KSEIETEGKAIQRLPYLGSEPVP*PRFHKI Trigger: TATCTTATGAAATCTTGGCAATGGAACTGGCTCACT...TCCTAGGTAGGGCAGTCTCTGGATGGCCTTTCCTTCAGTCTCTATTTCACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR TCA 72 bp | AGATGTAGTCCACAGAACTCAAAAAGGTCAACAAGCTaGAGGGCCCAACTGATGATGTATCAATCCTACATG | + |
|
Preference number: 3 (lower is better) Translates to: RCSPQNSKRSTS*RAQLMMYQSYM Trigger: CATGTAGGATTGATACATCATCAGTTGGGCCCTTCAGCTTGTTGACCTTTTTGAGTTCTGTGGACTACATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR GCA 72 bp | TTTCAGAAAGCACATTACCAAGTGAGCCAGTTCCATTaGCAAGATTTCATAAGATACCTGGAGAGGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: FQKAHYQVSQFH*QDFIRYLERRM Trigger: CATCCTCCTCTCCAGGTATCTTATGAAATCTTGGCAATGGAACTGGCTCACTTGGTAATGTGCTTTCTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR GCA 72 bp | GTGACTACTTCAGTACTACTTAGATGTAGAACAAAATaGTCACAGAAGGTAGAGAGTGGGAGGGACTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VTTSVLLRCRTK*SQKVESGRDLG Trigger: TCCTAAGTCCCTCCCACTCTCTACCTTCTGTGAGCATTTTGTTCTACATCTAAGTAGTACTGAAGTAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR GCA 72 bp | GGAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTaGAAACGGATACAACTGCTCTGTAAATCAATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GERGTFYHCWWN*KRIQLLCKSIW Trigger: CCAGATTGATTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR CCA 72 bp | CACACTCTAGTGGATGATCTTACAGTCTTGGCTTTATaGACAGCACTATTGAGACTTAGTGGGTTATCCATC | + |
|
Preference number: 3 (lower is better) Translates to: HTLVDDLTVLAL*TALLRLSGLSI Trigger: GATGGATAACCCACTAAGTCTCAATAGTGCTGTCCATAAAGCCAAGACTGTAAGATCATCCACTAGAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
||
| 3UTR CCA 72 bp | AAATACATCTACCTGAAGACCCAGCAATATCACTCTTaGGAATTTACCCAAAATATGCCCCACCCTGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: KYIYLKTQQYHS*EFTQNMPHPVT Trigger: TGTGACAGGGTGGGGCATATTTTGGGTAAATTCCCAAGAGTGATATTGCTGGGTCTTCAGGTAGATGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR CCA 72 bp | GGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTaGAATTGCAAACGGATACAACTGCTCTGTAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GCGERGTFYHCW*NCKRIQLLCKS Trigger: TGATTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR CCA 72 bp | CAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTaGTGGAATTGCAAACGGATACAACTGCTCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QGCGERGTFYHC*WNCKRIQLLCK Trigger: TTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCCTTCTCAAAAATATTAACCCAGAGTTACTCTTGGCTAAAGGAAATACATGGTTTGGTGAAGTCTaGGTTTTCCAGAGTAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PTLLKNINPELLLAKGNTWFGEV*VFQSRG Trigger: TCCCCTACTCTGGAAAACCAAGACTTCACCAAACCA...TGTATTTCCTTTAGCCAAGAGTAACTCTGGGTTAATATTTTTGAGAAGGGTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCCTTCTCAAAAATATTAACCCAGAGTTACTCTTGGCTAAAGGAAATACACAAACCCAGATGCTATaGCTGATGCCAAGAAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PTLLKNINPELLLAKGNTQTQML*LMPRSA Trigger: AGCACTTCTTGGCATCAGCAATAGCATCTGGGTTTG...TGTATTTCCTTTAGCCAAGAGTAACTCTGGGTTAATATTTTTGAGAAGGGTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR TCA 72 bp | GTGACCTATGATGATTGCCCTCCAAAAGATCCAAGCTaGAAGAGTCAGATCCATATAATTTCACCCAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: VTYDDCPPKDPS*KSQIHIISPNQ Trigger: TTGGTTGGGTGAAATTATATGGATCTGACTCTTTCAGCTTGGATCTTTTGGAGGGCAATCATCATAGGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR TCA 72 bp | CTGGAGGTTCTTCAGAAAATCAGAAATACATCTACCTaGAGACCCAGCAATATCACTCTTGGGAATTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: LEVLQKIRNTST*RPSNITLGNLP Trigger: GGGTAAATTCCCAAGAGTGATATTGCTGGGTCTTCAGGTAGATGTATTTCTGATTTTCTGAAGAACCTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR GCA 72 bp | TGTAGAAAAATGGAAATAGAGCCATATTTGTCACCTTaGACAAAGCTCAAGGCCAAGTGGATAAGGACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CRKMEIEPYLSP*TKLKAKWIRTS Trigger: TGAGGTCCTTATCCACTTGGCCTTGAGCTTTGTGCAAGGTGACAAATATGGCTCTATTTCCATTTTTCTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAACGGATACAACTGCTCTGGAATTACTCATTTTTaGTTTCTGGATCTGGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KEEHSTIAGGIANGYNCSGITHF*FLDLEH Trigger: GTGCTCCAGATCCAGAAACAAAAAATGAGTAATTCC...AGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGGCATTCACATATAGGGGCATCATTTTCTTaGGACTTTGTAGCAACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FCRGPRFHLAHNGWHSHIGASFS*DFVATS Trigger: ACTGGTTGCTACAAAGTCCAAAGAAAATGATGCCCC...TATATGTGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCCTTCTCAAAAATATTAACCCAGAGTTACTCTTGGCTAAAGGAAATACAGGGGCATCATTTTCTTaGGACTTTGTAGCAACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PTLLKNINPELLLAKGNTGASFS*DFVATS Trigger: ACTGGTTGCTACAAAGTCCAAAGAAAATGATGCCCC...TGTATTTCCTTTAGCCAAGAGTAACTCTGGGTTAATATTTTTGAGAAGGGTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAACGGATACAACTGCTCTATTTCACCCAACCAATaGACAGAAGCTGTCATGATT | + |
|
Preference number: 3 (lower is better) Translates to: KEEHSTIAGGIANGYNCSISPNQ*TEAVMI Trigger: AATCATGACAGCTTCTGTCAATTGGTTGGGTGAAAT...AGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAACGGATACAACTGCTCTGAAGCTATTATATCCTaGATGCCAAACCAGATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KEEHSTIAGGIANGYNCSEAIIS*MPNQIK Trigger: CTTTATCTGGTTTGGCATCAAGGATATAATAGCTTC...AGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR GCA 72 bp | TCTACCATTGCTGGTGGAATTGCAAACGGATACAACTaGTCTGTAAATCAATCTGGAGGTTCTTCAGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: STIAGGIANGYN*SVNQSGGSSEN Trigger: ATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR GCA 72 bp | GAAGATTCATCTTTAGTTAAGAGCACTTGCTGCTTTTaGAGAGGACCAAGGTTTCATTTAGCACATAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: EDSSLVKSTCCF*RGPRFHLAHNG Trigger: GCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAAGCAGCAAGTGCTCTTAACTAAAGATGAATCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR GCA 72 bp | AAGGGATGTGAAGATTCATCTTTAGTTAAGAGCACTTaGTGCTTTTGCAGAGGACCAAGGTTTCATTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KGCEDSSLVKST*CFCRGPRFHLA Trigger: TGCTAAATGAAACCTTGGTCCTCTGCAAAAGCAGCAAGTGCTCTTAACTAAAGATGAATCTTCACATCCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR CCA 72 bp | TGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTaGCATTCACATATAACTCTTATTCCACCTAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: CRGPRFHLAHNG*HSHITLIPPNP Trigger: TGGATTAGGTGGAATAAGAGTTATATGTGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR-3UTR CAA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAATGTAACACTAGACCCTaGTTTGTGATAGCAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NGYNCSVNQSGGSSENQKCNTRP*FVIAEA Trigger: AGCTTCTGCTATCACAAACAAGGGTCTAGTGTTACA...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGGCATTCACATATAGAAGCTATTATATCCTaGATGCCAAACCAGATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FCRGPRFHLAHNGWHSHIEAIIS*MPNQIK Trigger: CTTTATCTGGTTTGGCATCAAGGATATAATAGCTTC...TATATGTGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
||
| 3UTR TCA 72 bp | ACTCAGTCTAATAAAAGAGAAAGTGGAAAAGAGCCTTaGACTCATTGGTACAGGAGGAAATTTCCTAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TQSNKRESGKEP*THWYRRKFPKL Trigger: AAGCTTAGGAAATTTCCTCCTGTACCAATGAGTTCAAGGCTCTTTTCCACTTTCTCTTTTATTAGACTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR CCA 72 bp | CCGAAAGGACATGTATGGTATGTACTCACTAATAAGTaGATACTAGCCAATAAATACAGAATAGCCAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PKGHVWYVLTNK*ILANKYRIAKM Trigger: CATCTTGGCTATTCTGTATTTATTGGCTAGTATCCACTTATTAGTGAGTACATACCATACATGTCCTTTCGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR CCA 72 bp | AATTGCAAACGGATACAACTGCTCTGTAAATCAATCTaGAGGTTCTTCAGAAAATCAGAAATACATCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: NCKRIQLLCKSI*RFFRKSEIHLP Trigger: AGGTAGATGTATTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTTTGCAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| 3UTR CCA 72 bp | TTTGAAACATGTTCTTTACTAATAACAGAAAGGGAGTaGATCTCCATAAGACCCAAGAAATTCGGAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FETCSLLITERE*ISIRPKKFGRK Trigger: TTTTCTTCCGAATTTCTTGGGTCTTATGGAGATCCACTCCCTTTCTGTTATTAGTAAAGAACATGTTTCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
||
| CDS-3UTR CCA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGCAGGGGAGTTCCTGCTaGAAACATGAAAGCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLQGSSC*KHESCG Trigger: TCCGCAGCTTTCATGTTTCCAGCAGGAACTCCCCTG...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR CAA 72 bp | GCTCTACCAGAGCATTACCAGTACAGATGCTGCTGCTaGCAGCCAATCATTGGACTGAGCAATAGGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPEHYQYRCCC*QPIIGLSNRTP Trigger: TGGGGTCCTATTGCTCAGTCCAATGATTGGCTGCAAGCAGCAGCATCTGTACTGGTAATGCTCTGGTAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| CDS-3UTR CCA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGCCCAGAGAAGGGAAATaGAGTAGCCAATGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLPREGK*SSQCTL Trigger: CAAAGTACATTGGCTACTCCATTTCCCTTCTCTGGG...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR CAA 72 bp | ATTGAGGGCCAGCAGAAAGAATGGAAACAAGCAACATaGGGATCCTCCAGAGTGTACAAGAGACCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IEGQQKEWKQAT*GSSRVYKRPGR Trigger: TCTCCCAGGTCTCTTGTACACTCTGGAGGATCCCAATGTTGCTTGTTTCCATTCTTTCTGCTGGCCCTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| CDS-3UTR CCA 90 bp | CCATTGCCAAGATTTCATAAGATACCTGGAGAGGAGGATGTCCTTGGGTCTGCTCCCAGAGAAGGGAAATaGAGTAGCCAATGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLPRFHKIPGEEDVLGSAPREGK*SSQCTL Trigger: CAAAGTACATTGGCTACTCCATTTCCCTTCTCTGGG...AGCAGACCCAAGGACATCCTCCTCTCCAGGTATCTTATGAAATCTTGGCAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| CDS-3UTR CCA 90 bp | TCAAAACCTCAGGTGAGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATCCCAGAGAAGGGAAATaGAGTAGCCAATGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPQVRAHVGKDVEKEEHPREGK*SSQCTL Trigger: CAAAGTACATTGGCTACTCCATTTCCCTTCTCTGGG...ATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR CAA 72 bp | TTGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATaGCTGGTGGAATTGCAAACGGATACAACTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LARMWRKRNILP*LVELQTDTTAL Trigger: CAGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| CDS-3UTR CCA 90 bp | GCATCATTTTCTTTGGACTTTGTAGCAACCAGTAGATTTCACACTCTAGTGGATACACCCTGGAGATGGTaGCTTGCTGACAGGCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: ASFSLDFVATSRFHTLVDTPWRW*LADRLC Trigger: ACATAGCCTGTCAGCAAGCCACCATCTCCAGGGTGT...ATCCACTAGAGTGTGAAATCTACTGGTTGCTACAAAGTCCAAAGAAAATGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235324.2 |
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| CDS-3UTR CCA 90 bp | TCATCTTTAGTTAAGAGCACTTGCTGCTTTTGCAGAGGACCAAGGTTTCATTTAAGAACACCCTGGAGATaGTGGCTTGCTGACAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVKSTCCFCRGPRFHLRTPWR*WLADRL Trigger: TAGCCTGTCAGCAAGCCACCATCTCCAGGGTGTTCT...TAAATGAAACCTTGGTCCTCTGCAAAAGCAGCAAGTGCTCTTAACTAAAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235324.2 |
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| 3UTR CAA 72 bp | GAAATACATCTACCTGAAGACCCAGCAATATCACTCTaGGGAATTTACCCAAAATATGCCCCACCCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EIHLPEDPAISL*GIYPKYAPPCH Trigger: GTGACAGGGTGGGGCATATTTTGGGTAAATTCCCAAGAGTGATATTGCTGGGTCTTCAGGTAGATGTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR CAA 72 bp | CAAGATTTCATAAGATACCTGGAGAGGAGGATGTCCTaGGGTCTGCTGATAAACAGTTCCCTCTTGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDFIRYLERRMS*GLLINSSLLKF Trigger: AAACTTCAAGAGGGAACTGTTTATCAGCAGACCCAAGGACATCCTCCTCTCCAGGTATCTTATGAAATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| 3UTR CAA 72 bp | CAAACTTTAACAGAAATATTACAAGGCATCAGGACTTaGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTLTEILQGIRT*FLWAGGLSLST Trigger: TGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCTTGTAATATTTCTGTTAAAGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| CDS-3UTR GCA 90 bp | GGGAGGAGACAGGGGAGAGGTAAAGATGGTCAGGAAATTAAACAGAGGTACATCTTCGATGTCATTAGGTaGATGAGAATCAAATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRRQGRGKDGQEIKQRYIFDVIR*MRIKSV Trigger: AACAGATTTGATTCTCATGCACCTAATGACATCGAA...GATGTACCTCTGTTTAATTTCCTGACCATCTTTACCTCTCCCCTGTCTCCTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| CDS-3UTR GCA 90 bp | TGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAATATTCAGAAGAGCAATaGAGCCTTGTAAGACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WQGCGERGTFYHCWWNCKYSEEQ*SLVRQK Trigger: CTTCTGTCTTACAAGGCTGCATTGCTCTTCTGAATA...TTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR CAA 72 bp | TTTTCAGAAAGCACATTACCAAGTGAGCCAGTTCCATaGCCAAGATTTCATAAGATACCTGGAGAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSESTLPSEPVP*PRFHKIPGEED Trigger: ATCCTCCTCTCCAGGTATCTTATGAAATCTTGGCAATGGAACTGGCTCACTTGGTAATGTGCTTTCTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGGATGTGGAGAAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAACAATGCTACATAGAGTaGGTCACTAAATTCATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: WQGCGERGTFYHCWWNCKQCYIE*VTKFIS Trigger: CGAAATGAATTTAGTGACTCACTCTATGTAGCATTG...TTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTTCTCCACATCCTTGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| CDS-3UTR GCA 90 bp | TCAAAACCTCAGGTGAGAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACATTTCGATGTCATTAGGTaGATGAGAATCAAATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKPQVRAHVGKDVEKEEHFDVIR*MRIKSV Trigger: AACAGATTTGATTCTCATGCACCTAATGACATCGAA...ATGTTCCTCTTTCTCCACATCCTTGCCAACATGTGCTCTCACCTGAGGTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| CDS-3UTR GCA 90 bp | AACAGAAATATTACAAGGCATCAGGACTTTGTTCCTGTGGGCTGGGGGCTTATCAAATTTAAAAACATGTaGAAGACCCAGAGAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NRNITRHQDFVPVGWGLIKFKNM*KTQRRE Trigger: TTCCCTTCTCTGGGTCTTGCACATGTTTTTAAATTT...GATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCTTGTAATATTTCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| CDS-3UTR CCA 90 bp | TCATCTTTAGTTAAGAGCACTTGCTGCTTTTGCAGAGGACCAAGGTTTCATTTACCCAGAGAAGGGAAATaGAGTAGCCAATGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVKSTCCFCRGPRFHLPREGK*SSQCTL Trigger: CAAAGTACATTGGCTACTCCATTTCCCTTCTCTGGG...TAAATGAAACCTTGGTCCTCTGCAAAAGCAGCAAGTGCTCTTAACTAAAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR CAA 72 bp | ATCTGTAACCGAAGTTTTAAGCACTCTCATGTCATTTaGACCTTTGTTAGTTCTCGGCATGCATGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ICNRSFKHSHVI*TFVSSRHACSV Trigger: TACACTGCATGCATGCCGAGAACTAACAAAGGTCAAAATGACATGAGAGTGCTTAAAACTTCGGTTACAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| CDS-3UTR GCA 90 bp | TTTTGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGGCATTCACATATATATTCAGAAGAGCAATaGAGCCTTGTAAGACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FCRGPRFHLAHNGWHSHIYSEEQ*SLVRQK Trigger: CTTCTGTCTTACAAGGCTGCATTGCTCTTCTGAATA...TATATGTGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| CDS-3UTR GCA 90 bp | TCATCTTTAGTTAAGAGCACTTGCTGCTTTTGCAGAGGACCAAGGTTTCATTTATATTCAGAAGAGCAATaGAGCCTTGTAAGACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVKSTCCFCRGPRFHLYSEEQ*SLVRQK Trigger: CTTCTGTCTTACAAGGCTGCATTGCTCTTCTGAATA...TAAATGAAACCTTGGTCCTCTGCAAAAGCAGCAAGTGCTCTTAACTAAAGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| 3UTR CAA 72 bp | ATGTCTGTATGTAGAAAAATGGAAATAGAGCCATATTaGTCACCTTGCACAAAGCTCAAGGCCAAGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: MSVCRKMEIEPY*SPCTKLKAKWI Trigger: TATCCACTTGGCCTTGAGCTTTGTGCAAGGTGACAAATATGGCTCTATTTCCATTTTTCTACATACAGACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR CAA 72 bp | AGTCCATTATACCCCATCATATTTCTGTACTCTCTATaGCATCTCCATTTTCTCCCTAGAAACTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLYPIIFLYSL*HLHFLPRNSLA Trigger: AGCCAAAGAGTTTCTAGGGAGAAAATGGAGATGCAATAGAGAGTACAGAAATATGATGGGGTATAATGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| 3UTR CAA 72 bp | TCTACAGCTTCAGACTATGCACAGATTCATGTATTGTaGCCTAGAAAAGGAGAACTAAGCATAGCATGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: STASDYAQIHVL*PRKGELSIACY Trigger: ATAGCATGCTATGCTTAGTTCTCCTTTTCTAGGCAACAATACATGAATCTGTGCATAGTCTGAAGCTGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| CDS-3UTR TCA 90 bp | TTTTGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGGCATTCACATATACAATGCTACATAGAGTaGGTCACTAAATTCATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FCRGPRFHLAHNGWHSHIQCYIE*VTKFIS Trigger: CGAAATGAATTTAGTGACTCACTCTATGTAGCATTG...TATATGTGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| CDS-3UTR TCA 90 bp | GCATCATTTTCTTTGGACTTTGTAGCAACCAGTAGATTTCACACTCTAGTGGATCAATGCTACATAGAGTaGGTCACTAAATTCATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASFSLDFVATSRFHTLVDQCYIE*VTKFIS Trigger: CGAAATGAATTTAGTGACTCACTCTATGTAGCATTG...ATCCACTAGAGTGTGAAATCTACTGGTTGCTACAAAGTCCAAAGAAAATGATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| CDS-3UTR GCA 90 bp | CCAGAGTTACTCTTGGCTAAAGGAAATACAAGGACAAAAAGTGAAATAGAGACTTATTCAGAAGAGCAATaGAGCCTTGTAAGACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PELLLAKGNTRTKSEIETYSEEQ*SLVRQK Trigger: CTTCTGTCTTACAAGGCTGCATTGCTCTTCTGAATA...AGTCTCTATTTCACTTTTTGTCCTTGTATTTCCTTTAGCCAAGAGTAACTCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| CDS-3UTR GCA 90 bp | GCATCATTTTCTTTGGACTTTGTAGCAACCAGTAGATTTCACACTCTAGTGGATTTCGATGTCATTAGGTaGATGAGAATCAAATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASFSLDFVATSRFHTLVDFDVIR*MRIKSV Trigger: AACAGATTTGATTCTCATGCACCTAATGACATCGAA...ATCCACTAGAGTGTGAAATCTACTGGTTGCTACAAAGTCCAAAGAAAATGATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| CDS-3UTR GCA 90 bp | AACGGATACAACTGCTCTGTAAATCAATCTGGAGGTTCTTCAGAAAATCAGAAAAAATTTAAAAACATGTaGAAGACCCAGAGAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NGYNCSVNQSGGSSENQKKFKNM*KTQRRE Trigger: TTCCCTTCTCTGGGTCTTGCACATGTTTTTAAATTT...TTTCTGATTTTCTGAAGAACCTCCAGATTGATTTACAGAGCAGTTGTATCCGTT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| CDS-3UTR CAA 90 bp | GGACTTTGTTCCTGTGGGCTGGGGGCTTATCTTTGTCCACATAGCAACCAGTTGAAAGCTGCGGATATGTaGAACCCTCTGCTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLCSCGLGAYLCPHSNQLKAADM*NPLLVS Trigger: AGACACAAGCAGAGGGTTCAACATATCCGCAGCTTT...CAACTGGTTGCTATGTGGACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGAGACAGGGGAGAGGTAAAGATGGTCAGGAAATTAAACAGAGGTACATCAAAGCTGCGGATATGTaGAACCCTCTGCTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRRQGRGKDGQEIKQRYIKAADM*NPLLVS Trigger: AGACACAAGCAGAGGGTTCAACATATCCGCAGCTTT...GATGTACCTCTGTTTAATTTCCTGACCATCTTTACCTCTCCCCTGTCTCCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238012.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCACGAGTGATGACCAGGGTTTCCTGAACAAAAAGTTCACAATCACCCTTAAAGCTGCGGATATGTaGAACCCTCTGCTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WSTSDDQGFLNKKFTITLKAADM*NPLLVS Trigger: AGACACAAGCAGAGGGTTCAACATATCCGCAGCTTT...AAGGGTGATTGTGAACTTTTTGTTCAGGAAACCCTGGTCATCACTCGTGCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000235324.2 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| CDS-3UTR CAA 90 bp | AAAGAGGAACATTCTACCATTGCTGGTGGAATTGCAAACGGATACAACTGCTCTAAAGCTGCGGATATGTaGAACCCTCTGCTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEEHSTIAGGIANGYNCSKAADM*NPLLVS Trigger: AGACACAAGCAGAGGGTTCAACATATCCGCAGCTTT...AGAGCAGTTGTATCCGTTTGCAATTCCACCAGCAATGGTAGAATGTTCCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236246.2 |
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| CDS-3UTR CAA 90 bp | TTTTGCAGAGGACCAAGGTTTCATTTAGCACATAATGGCTGGCATTCACATATATTCACGAGCCACCAATaGGGATTATTCAGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FCRGPRFHLAHNGWHSHIFTSHQ*GLFRRA Trigger: TGCTCTTCTGAATAATCCCAATTGGTGGCTCGTGAA...TATATGTGAATGCCAGCCATTATGTGCTAAATGAAACCTTGGTCCTCTGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235324.2 ENSMUST00000238003.2 |
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| CDS GCA 90 bp | CAATGGATGTACTTCGGCCAACTCTTTGAATGTACAAAATTAGTCTaGATCCCAAATCATTTAATAAGTGTGCCAAGCCAAAAGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QWMYFGQLFECTKLV*IPNHLISVPSQKLP Trigger: TGGCAGCTTTTGGCTTGGCACACTTATTAAATGATTTGGGATGCAGACTAATTTTGTACATTCAAAGAGTTGGCCGAAGTACATCCATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000058362.5 ENSMUST00000235324.2 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| CDS CAA 72 bp | GGAGTTCCTGCTGGAAACATGAAAGCTGCGGATATGTaGAACCCTCTGCTTGTGTCTGTACAGGATGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GVPAGNMKAADM*NPLLVSVQDAN Trigger: ATTGGCATCCTGTACAGACACAAGCAGAGGGTTCAACATATCCGCAGCTTTCATGTTTCCAGCAGGAACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058362.5 ENSMUST00000235324.2 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| CDS CAA 90 bp | GGGAAACACAGAGAAGTGAGGCGAGTGATGTTCACGAGCCACCAATaGGGATTATTCAGAAGAGCAATGCAGCCTTGTAAGACAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GKHREVRRVMFTSHQ*GLFRRAMQPCKTEE Trigger: CTCTTCTGTCTTACAAGGCTGCATTGCTCTTCTGAATAATCCCAATTGGTGGCTCGTGAACATCACTCGCCTCACTTCTCTGTGTTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058362.5 ENSMUST00000235324.2 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| CDS CAA 72 bp | AGAGAAGTGAGGCGAGTGATGTTCACGAGCCACCAATaGGGATTATTCAGAAGAGCAATGCAGCCTTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: REVRRVMFTSHQ*GLFRRAMQPCK Trigger: CTTACAAGGCTGCATTGCTCTTCTGAATAATCCCAATTGGTGGCTCGTGAACATCACTCGCCTCACTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058362.5 ENSMUST00000235324.2 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
||
| CDS TCA 72 bp | GAAGATTTCAGGGCACACCACCAATGCTACATAGAGTaGGTCACTAAATTCATTTCGCTCTACAATGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: EDFRAHHQCYIE*VTKFISLYNGV Trigger: TACTCCATTGTAGAGCGAAATGAATTTAGTGACTCACTCTATGTAGCATTGGTGGTGTGCCCTGAAATCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058362.5 ENSMUST00000235324.2 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| CDS GCA 72 bp | TACTTCGGCCAACTCTTTGAATGTACAAAATTAGTCTaGATCCCAAATCATTTAATAAGTGTGCCAAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: YFGQLFECTKLV*IPNHLISVPSQ Trigger: TTGGCTTGGCACACTTATTAAATGATTTGGGATGCAGACTAATTTTGTACATTCAAAGAGTTGGCCGAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058362.5 ENSMUST00000235324.2 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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| CDS CAA 72 bp | AGAATTCCAGTTGTAGTTTGTGATAAGAAAAGTATTTaGATTCCCATATTCCAGAAATCCATCTTCGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: RIPVVVCDKKSI*IPIFQKSIFDW Trigger: CCAGTCGAAGATGGATTTCTGGAATATGGGAATCAAAATACTTTTCTTATCACAAACTACAACTGGAATTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058362.5 ENSMUST00000236246.2 ENSMUST00000238003.2 ENSMUST00000238012.2 |
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