RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000115701

Ensembl transcript IDs: ENSMUST00000079669.7, ENSMUST00000226689.2, ENSMUST00000227131.2, ENSMUST00000227188.2, ENSMUST00000227631.2, ENSMUST00000227847.2, ENSMUST00000228285.2

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGCCAGCAGGAACAGGGACAAAGGAAACCCAGCGACCAGTGGCTaGAATTCATACTGGTTGGCGCCACTCCCGTGGCATTTTGGGGCA +
Preference number: 1 (lower is better)
Translates to: CASRNRDKGNPATSG*NSYWLAPLPWHFGA
Trigger: TGCCCCAAAATGCCACGGGAGTGGCGCCAACCAGTATGAATTCCAGCCACTGGTCGCTGGGTTTCCTTTGTCCCTGTTCCTGCTGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 90 bp TGGGAGTACTACTTACTCCTAGGTCCCAGTGGTCACAGCACTCTCTaGAGGCAAGTTCTCCTCGTGCAGGGAATGTGCCCAGTGGTCTGG +
Preference number: 1 (lower is better)
Translates to: WEYYLLLGPSGHSTL*RQVLLVQGMCPVVW
Trigger: CCAGACCACTGGGCACATTCCCTGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGTAAGTAGTACTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp CAGTGGCTGGAATTCATACTGGTTGGCGCCACTCCCGTGGCATTTTaGGGCAGATCTCAGTGGAGGGTCCCAAGATCCCCAAGGACTCTT +
Preference number: 1 (lower is better)
Translates to: QWLEFILVGATPVAF*GRSQWRVPRSPRTL
Trigger: AAGAGTCCTTGGGGATCTTGGGACCCTCCACTGAGATCTGCCCCAAAATGCCACGGGAGTGGCGCCAACCAGTATGAATTCCAGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp GTCTTGTGCCAGCAGGAACAGGGACAAAGGAAACCCAGCGACCAGTaGCTGGAATTCATACTGGTTGGCGCCACTCCCGTGGCATTTTGG +
Preference number: 1 (lower is better)
Translates to: VLCQQEQGQRKPSDQ*LEFILVGATPVAFW
Trigger: CCAAAATGCCACGGGAGTGGCGCCAACCAGTATGAATTCCAGCCACTGGTCGCTGGGTTTCCTTTGTCCCTGTTCCTGCTGGCACAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp CAGGGAATGTGCCCAGTGGTCTGGAACTCAGGTCCACCTCCTTCCTaGAAACGAAGCCCCAAAGGGACCCTGTCCAAGAAGCTCTATTGC +
Preference number: 1 (lower is better)
Translates to: QGMCPVVWNSGPPPS*KRSPKGTLSKKLYC
Trigger: GCAATAGAGCTTCTTGGACAGGGTCCCTTTGGGGCTTCGTTTTCAGGAAGGAGGTGGACCTGAGTTCCAGACCACTGGGCACATTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp CCCACTTCCTCCAACAAGCCCACACCTCCTAACAGTGCCACTCCCTaGGCCAAGCATATTCAAACCACTACAGCCTACTGTGCTGGATGG +
Preference number: 1 (lower is better)
Translates to: PTSSNKPTPPNSATP*AKHIQTTTAYCAGW
Trigger: CCATCCAGCACAGTAGGCTGTAGTGGTTTGAATATGCTTGGCCCAGGGAGTGGCACTGTTAGGAGGTGTGGGCTTGTTGGAGGAAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp CCACTCCCGCTTTCTGGTCCTGGTATTCCCCTGTATTGGGGCACATaGTCTTCGCAAGACCAAGGGTCTCTCCTTCCATTGATGGCTGAC +
Preference number: 1 (lower is better)
Translates to: PLPLSGPGIPLYWGT*SSQDQGSLLPLMAD
Trigger: GTCAGCCATCAATGGAAGGAGAGACCCTTGGTCTTGCGAAGATCATGTGCCCCAATACAGGGGAATACCAGGACCAGAAAGCGGGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 90 bp CCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTaGTTGGACTGGTCTCTGAAAGACCCGGGATACAAGATCCAAAGT +
Preference number: 1 (lower is better)
Translates to: PCPRSSIASVASVLS*LDWSLKDPGYKIQS
Trigger: ACTTTGGATCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp TCTCCCACATGGTTAGAAGGAAAGTCTCAAAGTCCAATCCCACAGTaGCCCACTTCCTCCAACAAGCCCACACCTCCTAACAGTGCCACT +
Preference number: 1 (lower is better)
Translates to: SPTWLEGKSQSPIPQ*PTSSNKPTPPNSAT
Trigger: AGTGGCACTGTTAGGAGGTGTGGGCTTGTTGGAGGAAGTGGGCCACTGTGGGATTGGACTTTGAGACTTTCCTTCTAACCATGTGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp GGGTCCCAAGATCCCCAAGGACTCTTCACTCCAAGGATATTGACATaGCTGGTAACTGGAACACGACATCTGTTCCAACCGAACCACTCC +
Preference number: 1 (lower is better)
Translates to: GSQDPQGLFTPRILT*LVTGTRHLFQPNHS
Trigger: GGAGTGGTTCGGTTGGAACAGATGTCGTGTTCCAGTTACCAGTCATGTCAATATCCTTGGAGTGAAGAGTCCTTGGGGATCTTGGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp AGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTGGACTaGTCTCTGAAAGACCCGGGATACAAGATCCAAAGTGGAAATCCT +
Preference number: 1 (lower is better)
Translates to: RSSIASVASVLSCLD*SLKDPGYKIQSGNP
Trigger: AGGATTTCCACTTTGGATCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp CTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTGGACTGGTCTCTaGAAGACCCGGGATACAAGATCCAAAGTGGAAATCCTAATCAGA +
Preference number: 1 (lower is better)
Translates to: LLLLWPACSPAWTGL*KTRDTRSKVEILIR
Trigger: TCTGATTAGGATTTCCACTTTGGATCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGCCACAGAAGCAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp CACATGATCTTCGCAAGACCAAGGGTCTCTCCTTCCATTGATGGCTaGCTAGGCCATCTTCTGCTTCATATGCAACTAGAGGCAGAGCTC +
Preference number: 1 (lower is better)
Translates to: HMIFARPRVSPSIDG*LGHLLLHMQLEAEL
Trigger: GAGCTCTGCCTCTAGTTGCATATGAAGCAGAAGATGGCCTAGTCAGCCATCAATGGAAGGAGAGACCCTTGGTCTTGCGAAGATCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp ATTGGGGCACATGATCTTCGCAAGACCAAGGGTCTCTCCTTCCATTaGTGGCTGACTAGGCCATCTTCTGCTTCATATGCAACTAGAGGC +
Preference number: 1 (lower is better)
Translates to: IGAHDLRKTKGLSFH*WLTRPSSASYATRG
Trigger: GCCTCTAGTTGCATATGAAGCAGAAGATGGCCTAGTCAGCCATCAATGGAAGGAGAGACCCTTGGTCTTGCGAAGATCATGTGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp ACACATGGTGGGACTCATGACTCTAGCTGCATATGTAGCAAAGGATaGCCTAGTAAATCATCAATGGGAGGAGAGGCCTCTGGTCCTGTG +
Preference number: 1 (lower is better)
Translates to: THGGTHDSSCICSKG*PSKSSMGGEASGPV
Trigger: CACAGGACCAGAGGCCTCTCCTCCCATTGATGATTTACTAGGCCATCCTTTGCTACATATGCAGCTAGAGTCATGAGTCCCACCATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp CAACTTCTTGTCCCAAAGGCAGCTAGGAGAAGACTGTCTCCCACATaGTTAGAAGGAAAGTCTCAAAGTCCAATCCCACAGTGGCCCACT +
Preference number: 1 (lower is better)
Translates to: QLLVPKAARRRLSPT*LEGKSQSPIPQWPT
Trigger: AGTGGGCCACTGTGGGATTGGACTTTGAGACTTTCCTTCTAACCATGTGGGAGACAGTCTTCTCCTAGCTGCCTTTGGGACAAGAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 90 bp TGGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATaGCCAGGAGAGGTATTGCTGGATGCTCCGGTAGTACTATGCCCA +
Preference number: 1 (lower is better)
Translates to: WSMCPYYKLEHLLGI*PGEVLLDAPVVLCP
Trigger: TGGGCATAGTACTACCGGAGCATCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp TTAGCAGATAGGGATCCTGTTTCAAGCCTTAGCATGCCCTATACCTaGATCGCAGTAGAAGCCCTTGGAATTTGGGGTCAAATATCTACC +
Preference number: 1 (lower is better)
Translates to: LADRDPVSSLSMPYT*IAVEALGIWGQIST
Trigger: GGTAGATATTTGACCCCAAATTCCAAGGGCTTCTACTGCGATTCAGGTATAGGGCATGCTAAGGCTTGAAACAGGATCCCTATCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp CCCTGGGCCAAGCATATTCAAACCACTACAGCCTACTGTGCTGGATaGCTCCGTACACTATGCAAAATCAAAAACAGCTTAAATTCAAGC +
Preference number: 1 (lower is better)
Translates to: PWAKHIQTTTAYCAG*LRTLCKIKNSLNSS
Trigger: GCTTGAATTTAAGCTGTTTTTGATTTTGCATAGTGTACGGAGCCATCCAGCACAGTAGGCTGTAGTGGTTTGAATATGCTTGGCCCAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp CACTCCCTGGGCCAAGCATATTCAAACCACTACAGCCTACTGTGCTaGATGGCTCCGTACACTATGCAAAATCAAAAACAGCTTAAATTC +
Preference number: 1 (lower is better)
Translates to: HSLGQAYSNHYSLLC*MAPYTMQNQKQLKF
Trigger: GAATTTAAGCTGTTTTTGATTTTGCATAGTGTACGGAGCCATCCAGCACAGTAGGCTGTAGTGGTTTGAATATGCTTGGCCCAGGGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp TCTTGGTACAGGTCACAGAGAGAGATGCACTATCAAGGCACAAGATaGATGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTC +
Preference number: 1 (lower is better)
Translates to: SWYRSQREMHYQGTR*MAVKEQQPILFPGL
Trigger: GAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCATTCATCTTGTGCCTTGATAGTGCATCTCTCTCTGTGACCTGTACCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 90 bp GAGATAACTATATCAGGGTCCTATCCGCAAAATGTTGCTGCCAAATaGAATAGTGTCTGGGTTTGGTGGTTGTTTATGAGATGGATCCCC +
Preference number: 1 (lower is better)
Translates to: EITISGSYPQNVAAK*NSVWVWWLFMRWIP
Trigger: GGGGATCCATCTCATAAACAACCACCAAACCCAGACACTATTGCATTTGGCAGCAACATTTTGCGGATAGGACCCTGATATAGTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp TCAACTATAGTACTTGAGAGTTTTGCTCGGTATAGTAGCCTGGGCTaGCATTTGTGTTCTCTTTGTGTCTGTATAACATCTGCCCAGGAT +
Preference number: 1 (lower is better)
Translates to: STIVLESFARYSSLG*HLCSLCVCITSAQD
Trigger: ATCCTGGGCAGATGTTATACAGACACAAAGAGAACACAAATGCCAGCCCAGGCTACTATACCGAGCAAAACTCTCAAGTACTATAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp GCATGTTTATTGAGCTTCTATTCTGGTGGCAGCACATTTATGACCTaGATGCTTTCCACTGGCCTTTATATGAAGGAAGCTGGAAAACTG +
Preference number: 1 (lower is better)
Translates to: ACLLSFYSGGSTFMT*MLSTGLYMKEAGKL
Trigger: CAGTTTTCCAGCTTCCTTCATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAGCTCAATAAACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 90 bp CACAAGATGAATGGCAGTCAAAGAACAACAGCCAATATTATTTCCTaGCCTCATCATGTACATATACACAATCCCTCAGTGGTGAACAAG +
Preference number: 1 (lower is better)
Translates to: HKMNGSQRTTANIIS*PHHVHIHNPSVVNK
Trigger: CTTGTTCACCACTGAGGGATTGTGTATATGTACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCATTCATCTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp GCACCTGAGATTCGATTCTCTCTTCCATCTCATGTATTCTGTTGCTaGTGCTCATATCTATGGTTCCTGATTTCTTTCCTAGGATTTCTA +
Preference number: 1 (lower is better)
Translates to: APEIRFSLPSHVFCC*CSYLWFLISFLGFL
Trigger: TAGAAATCCTAGGAAAGAAATCAGGAACCATAGATATGAGCATCAGCAACAGAATACATGAGATGGAAGAGAGAATCGAATCTCAGGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 90 bp AAAGAATCTGTATTTTGGAAAGAAAATAACTGGCGCTACACAGGATaGTTCTTTATAAGTCAAGTTCCATGGGATGCCATGATATCTTCT +
Preference number: 1 (lower is better)
Translates to: KESVFWKENNWRYTG*FFISQVPWDAMISS
Trigger: AGAAGATATCATGGCATCCCATGGAACTTGACTTATAAAGAATCATCCTGTGTAGCGCCAGTTATTTTCTTTCCAAAATACAGATTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 90 bp CCAGTGGCTGGAATTCATACTGGTTGGCGCCACTCCCGTGGCATTTaGGGGCAGATCTCAGTGGAGGGTCCCAAGATCCCCAAGGACTCT +
Preference number: 2 (lower is better)
Translates to: PVAGIHTGWRHSRGI*GQISVEGPKIPKDS
Trigger: AGAGTCCTTGGGGATCTTGGGACCCTCCACTGAGATCTGCCCCAAAATGCCACGGGAGTGGCGCCAACCAGTATGAATTCCAGCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTGGAATGCCAGGGCTATaGAGTGGGAGTGGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLGMPGL*SGSGWV
Trigger: AACCCACCCACTCCCACTTCATAGCCCTGGCATTCC...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCAATGTGCCCAGTGGTCTaGAACTCAGGTCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: TPRSQWSQHSLQASSPRAMCPVV*NSGPPP
Trigger: AGGAGGTGGACCTGAGTTCCAGACCACTGGGCACAT...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACGGAATGCCAGGGCTATaGAGTGGGAGTGGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNGMPGL*SGSGWV
Trigger: AACCCACCCACTCCCACTTCATAGCCCTGGCATTCC...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCAGCTTGGACTGGTCTCTaGAAGACCCGGGATACAAGA +
Preference number: 2 (lower is better)
Translates to: TPRSQWSQHSLQASSPRAAWTGL*KTRDTR
Trigger: TCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGC...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCACCCTGTATAGGGGAATaGCAGGGCTATGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: TPRSQWSQHSLQASSPRAPCIGE*QGYEVG
Trigger: TCCCACTTCATAGCCCTGGCATTCCCCTATACAGGG...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACGCCAGCGTGCTCTCCTaGTTGGACTGGTCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNASVLS*LDWSLK
Trigger: TTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGC...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACCTCGTGCAGGGAATGTaGCCAGTGGTCTGGAACTCA +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNLVQGM*PVVWNS
Trigger: TGAGTTCCAGACCACTGGGCACATTCCCTGCACGAG...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACACTCCTAGGTCCCAGTaGTCACAGCACTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNTPRSQ*SQHSLQ
Trigger: CTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACCAGGACTCCCTGTGGTaGGCATACTGGGTTCTGATG +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNQDSLW*AYWVLM
Trigger: CATCAGAACCCAGTATGCCCACCACAGGGAGTCCTG...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 90 bp TCCAACCGAACCACTCCCGCTTTCTGGTCCTGGTATTCCCCTGTATaGGGGCACATGATCTTCGCAAGACCAAGGGTCTCTCCTTCCATT +
Preference number: 2 (lower is better)
Translates to: SNRTTPAFWSWYSPV*GHMIFARPRVSPSI
Trigger: AATGGAAGGAGAGACCCTTGGTCTTGCGAAGATCATGTGCCCCAATACAGGGGAATACCAGGACCAGAAAGCGGGAGTGGTTCGGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCAGTGGGCACAAGGGAATaGATACAGGCATGCACTATA +
Preference number: 2 (lower is better)
Translates to: TPRSQWSQHSLQASSPRAVGTRE*IQACTI
Trigger: TATAGTGCATGCCTGTATGCATTCCCTTGTGCCCAC...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 90 bp TGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTaGGACTGGTCTCTGAAAGACCCGGGATACAAGATCCAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: CPRSSIASVASVLSC*DWSLKDPGYKIQSG
Trigger: TCCACTTTGGATCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCGGTCCACCTCCTTCCTaGAAACGAAGCCCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTGPPPS*KRSPKG
Trigger: CCCTTTGGGGCTTCGTTTTCAGGAAGGAGGTGGACC...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCGGCAAGTTCTCCTCGTaGAGGGAATGTGCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTGKFSS*RECAQW
Trigger: CCACTGGGCACATTCCCTGCACGAGGAGAACTTGCC...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 90 bp ACTGGTAAGTGGAATCAACATCTGTTCCAACAAACCCAGAGTGTCTaGTGCCAGCAGGAACAGGGACAAAGGAAACCCAGCGACCAGTGG +
Preference number: 2 (lower is better)
Translates to: TGKWNQHLFQQTQSV*CQQEQGQRKPSDQW
Trigger: CCACTGGTCGCTGGGTTTCCTTTGTCCCTGTTCCTGCTGGCACAAGACACTCTGGGTTTGTTGGAACAGATGTTGATTCCACTTACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTACAATCCCTCAGTGGTaGACAAGCACATACATACAT +
Preference number: 2 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLTIPQW*TSTYIH
Trigger: ATGTATGTATGTGCTTGTTCACCACTGAGGGATTGT...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACGTGGGCACAAGGGAATaGATACAGGCATGCACTATA +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNVGTRE*IQACTI
Trigger: TATAGTGCATGCCTGTATGCATTCCCTTGTGCCCAC...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCAACTCATGACTCTAGCTaGATATGTAGCAAAGGATGG +
Preference number: 2 (lower is better)
Translates to: TPRSQWSQHSLQASSPRATHDSS*ICSKGW
Trigger: CCATCCTTTGCTACATATGCAGCTAGAGTCATGAGT...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCCTCGTGCAGGGAATGTaGCCAGTGGTCTGGAACTCA +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTLVQGM*PVVWNS
Trigger: TGAGTTCCAGACCACTGGGCACATTCCCTGCACGAG...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGGGCAAGTTCTCCTCGTaGAGGGAATGTGCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQEGKFSS*RECAQW
Trigger: CCACTGGGCACATTCCCTGCACGAGGAGAACTTGCC...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAGGCAAGTTCTCCTCGTaGAGGGAATGTGCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLGKFSS*RECAQW
Trigger: CCACTGGGCACATTCCCTGCACGAGGAGAACTTGCC...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCAAAGGCACAAGATGAATaGCAGTCAAAGAACAACAGC +
Preference number: 2 (lower is better)
Translates to: TPRSQWSQHSLQASSPRAKAQDE*QSKNNS
Trigger: GCTGTTGTTCTTTGACTGCCATTCATCTTGTGCCTT...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTAAGGCACAAGATGAATaGCAGTCAAAGAACAACAGC +
Preference number: 2 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLKAQDE*QSKNNS
Trigger: GCTGTTGTTCTTTGACTGCCATTCATCTTGTGCCTT...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACCCATCTGGTAATCTCTaGCTGGAGCTTGTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNPSGNL*LELVSP
Trigger: AGGAGAAACAAGCTCCAGCCAGAGATTACCAGATGG...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATGGGGCAGATCTCAGTaGAGGGTCCCAAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLWGRSQ*RVPRSP
Trigger: TGGGGATCTTGGGACCCTCCACTGAGATCTGCCCCA...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGGGAATGCCAGGGCTATaGAGTGGGAGTGGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKGMPGL*SGSGWV
Trigger: AACCCACCCACTCCCACTTCATAGCCCTGGCATTCC...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGGGAATGCCAGGGCTATaGAGTGGGAGTGGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMGMPGL*SGSGWV
Trigger: AACCCACCCACTCCCACTTCATAGCCCTGGCATTCC...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCATATCAAGGCACAAGATaGATGGCAGTCAAAGAACAA +
Preference number: 2 (lower is better)
Translates to: TPRSQWSQHSLQASSPRAYQGTR*MAVKEQ
Trigger: TTGTTCTTTGACTGCCATTCATCTTGTGCCTTGATA...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTTATCAAGGCACAAGATaGATGGCAGTCAAAGAACAA +
Preference number: 2 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLYQGTR*MAVKEQ
Trigger: TTGTTCTTTGACTGCCATTCATCTTGTGCCTTGATA...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGGGTCCACCTCCTTCCTaGAAACGAAGCCCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKGPPPS*KRSPKG
Trigger: CCCTTTGGGGCTTCGTTTTCAGGAAGGAGGTGGACC...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGCTCGTGCAGGGAATGTaGCCAGTGGTCTGGAACTCA +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQELVQGM*PVVWNS
Trigger: TGAGTTCCAGACCACTGGGCACATTCCCTGCACGAG...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGGGCAAGTTCTCCTCGTaGAGGGAATGTGCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKGKFSS*RECAQW
Trigger: CCACTGGGCACATTCCCTGCACGAGGAGAACTTGCC...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCGGGAGGAGAGGCCTCTaGTCCTGTGGAGGTTTTATA +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTGRRGL*SCGGFI
Trigger: TATAAAACCTCCACAGGACCAGAGGCCTCTCCTCCC...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGGCTCTATTGCTTCTGTaGCCAGCGTGCTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQEALLLL*PACSPA
Trigger: AGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGC...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAGCTCTATTGCTTCTGTaGCCAGCGTGCTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLALLLL*PACSPA
Trigger: AGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGC...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGATGTGCCCAGTGGTCTaGAACTCAGGTCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQEMCPVV*NSGPPP
Trigger: AGGAGGTGGACCTGAGTTCCAGACCACTGGGCACAT...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAACTCCTAGGTCCCAGTaGTCACAGCACTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLTPRSQ*SQHSLQ
Trigger: CTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTACAGGACTCCCTGTGGTaGGCATACTGGGTTCTGATG +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLQDSLW*AYWVLM
Trigger: CATCAGAACCCAGTATGCCCACCACAGGGAGTCCTG...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGCAGGACTCCCTGTGGTaGGCATACTGGGTTCTGATG +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQEQDSLW*AYWVLM
Trigger: CATCAGAACCCAGTATGCCCACCACAGGGAGTCCTG...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAACTCCCGTGGCATTTTaGGGCAGATCTCAGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLTPVAF*GRSQWR
Trigger: CCTCCACTGAGATCTGCCCCAAAATGCCACGGGAGT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAGCTTGGACTGGTCTCTaGAAGACCCGGGATACAAGA +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLAWTGL*KTRDTR
Trigger: TCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGC...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTACCAATAGGCTCCCTGTaGGAGACAGCTTTTGACCCT +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLPIGSL*ETAFDP
Trigger: AGGGTCAAAAGCTGTCTCTCACAGGGAGCCTATTGG...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACTCAAGTTCCATGGGATaGCATGATATCTTCTCACCT +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNSSSMG*HDIFSP
Trigger: AGGTGAGAAGATATCATGGCATCCCATGGAACTTGA...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACACTCATGACTCTAGCTaGATATGTAGCAAAGGATGG +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNTHDSS*ICSKGW
Trigger: CCATCCTTTGCTACATATGCAGCTAGAGTCATGAGT...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGATGTGCCCAGTGGTCTaGAACTCAGGTCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMMCPVV*NSGPPP
Trigger: AGGAGGTGGACCTGAGTTCCAGACCACTGGGCACAT...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGACTCCTAGGTCCCAGTaGTCACAGCACTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKTPRSQ*SQHSLQ
Trigger: CTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAACCACTCCCGCTTTCTaGTCCTGGTATTCCCCTGTA +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLTTPAF*SWYSPV
Trigger: TACAGGGGAATACCAGGACCAGAAAGCGGGAGTGGT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GATGAATGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTGGAATGCCAGGGCTATaGAGTGGGAGTGGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: DEWQSKNNSQYYFLASSCGMPGL*SGSGWV
Trigger: AACCCACCCACTCCCACTTCATAGCCCTGGCATTCC...ACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACTATCAAGGCACAAGATaGATGGCAGTCAAAGAACAA +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNYQGTR*MAVKEQ
Trigger: TTGTTCTTTGACTGCCATTCATCTTGTGCCTTGATA...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACTGCAGCTATCTTCTTTaGGGTTTGTTGACAGATTAC +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNCSYLL*GLLTDY
Trigger: GTAATCTGTCAACAAACCTCAAAGAAGATAGCTGCA...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGGAGGAACCGCCACACTaGTTTCCACAGTGGTTGTAC +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMEEPPH*FPQWLY
Trigger: GTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTC...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGGAGGAACCGCCACACTaGTTTCCACAGTGGTTGTAC +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKEEPPH*FPQWLY
Trigger: GTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTC...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCGTGGGCACAAGGGAATaGATACAGGCATGCACTATA +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTVGTRE*IQACTI
Trigger: TATAGTGCATGCCTGTATGCATTCCCTTGTGCCCAC...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGCCCTGTATAGGGGAATaGCAGGGCTATGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKPCIGE*QGYEVG
Trigger: TCCCACTTCATAGCCCTGGCATTCCCCTATACAGGG...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGCCCTGTATAGGGGAATaGCAGGGCTATGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMPCIGE*QGYEVG
Trigger: TCCCACTTCATAGCCCTGGCATTCCCCTATACAGGG...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGGGGAGGAGAGGCCTCTaGTCCTGTGGAGGTTTTATA +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKGRRGL*SCGGFI
Trigger: TATAAAACCTCCACAGGACCAGAGGCCTCTCCTCCC...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAGGTCCACCTCCTTCCTaGAAACGAAGCCCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLGPPPS*KRSPKG
Trigger: CCCTTTGGGGCTTCGTTTTCAGGAAGGAGGTGGACC...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTGGTCCACCTCCTTCCTaGAAACGAAGCCCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGGPPPS*KRSPKG
Trigger: CCCTTTGGGGCTTCGTTTTCAGGAAGGAGGTGGACC...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACCCTCTACCAGCATCATaGGATATCATTTTAAATCTG +
Preference number: 2 (lower is better)
Translates to: GTATLISTVVVPACNPTNPLPAS*DIILNL
Trigger: CAGATTTAAAATGATATCTCATGATGCTGGTAGAGG...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAGCCAGCGTGCTCTCCTaGTTGGACTGGTCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPASVLS*LDWSLK
Trigger: TTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGC...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGCCATCTGGTAATCTCTaGCTGGAGCTTGTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQEPSGNL*LELVSP
Trigger: AGGAGAAACAAGCTCCAGCCAGAGATTACCAGATGG...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATGGTTGTTTATGAGATaGATCCCCAGGTGGGGAAGT +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLWLFMR*IPRWGS
Trigger: ACTTCCCCACCTGGGGATCCATCTCATAAACAACCA...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGAACAGTGCCACTCCCTaGGCCAAGCATATTCAAACC +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMNSATP*AKHIQT
Trigger: GGTTTGAATATGCTTGGCCCAGGGAGTGGCACTGTT...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGTTCCATGGGATGCCATaGTATCTTCTCACCTCTGTG +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMFHGMP*YLLTSV
Trigger: CACAGAGGTGAGAAGATATCATGGCATCCCATGGAA...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGTTCCATGGGATGCCATaGTATCTTCTCACCTCTGTG +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKFHGMP*YLLTSV
Trigger: CACAGAGGTGAGAAGATATCATGGCATCCCATGGAA...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAGCTTGGACTGGTCTCTaGAAGACCCGGGATACAAGA +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPAWTGL*KTRDTR
Trigger: TCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGC...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAGAGGAACCGCCACACTaGTTTCCACAGTGGTTGTAC +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPEEPPH*FPQWLY
Trigger: GTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTC...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGGTGGGCACAAGGGAATaGATACAGGCATGCACTATA +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKVGTRE*IQACTI
Trigger: TATAGTGCATGCCTGTATGCATTCCCTTGTGCCCAC...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCACCCTGTATAGGGGAATaGCAGGGCTATGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPPCIGE*QGYEVG
Trigger: TCCCACTTCATAGCCCTGGCATTCCCCTATACAGGG...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAGCCAGCGTGCTCTCCTaGTTGGACTGGTCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLASVLS*LDWSLK
Trigger: TTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGC...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GATGAATGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTGGGAGGAGAGGCCTCTaGTCCTGTGGAGGTTTTATA +
Preference number: 2 (lower is better)
Translates to: DEWQSKNNSQYYFLASSCGRRGL*SCGGFI
Trigger: TATAAAACCTCCACAGGACCAGAGGCCTCTCCTCCC...ACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGGCTCTATTGCTTCTGTaGCCAGCGTGCTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVALLLL*PACSPA
Trigger: AGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGC...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAGCTCTATTGCTTCTGTaGCCAGCGTGCTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLALLLL*PACSPA
Trigger: AGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGC...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAATGTGCCCAGTGGTCTaGAACTCAGGTCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLMCPVV*NSGPPP
Trigger: AGGAGGTGGACCTGAGTTCCAGACCACTGGGCACAT...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAACTCCTAGGTCCCAGTaGTCACAGCACTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLTPRSQ*SQHSLQ
Trigger: CTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTACTCCTAGGTCCCAGTaGTCACAGCACTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGTPRSQ*SQHSLQ
Trigger: CTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGCCATCTGGTAATCTCTaGCTGGAGCTTGTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMPSGNL*LELVSP
Trigger: AGGAGAAACAAGCTCCAGCCAGAGATTACCAGATGG...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAACCACTCCCGCTTTCTaGTCCTGGTATTCCCCTGTA +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPTTPAF*SWYSPV
Trigger: TACAGGGGAATACCAGGACCAGAAAGCGGGAGTGGT...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 90 bp ATAGTACTTGAGAGTTTTGCTCGGTATAGTAGCCTGGGCTGGCATTaGTGTTCTCTTTGTGTCTGTATAACATCTGCCCAGGATCTTCTG +
Preference number: 2 (lower is better)
Translates to: IVLESFARYSSLGWH*CSLCVCITSAQDLL
Trigger: CAGAAGATCCTGGGCAGATGTTATACAGACACAAAGAGAACACAAATGCCAGCCCAGGCTACTATACCGAGCAAAACTCTCAAGTACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCATGAGAGTCTTCTTTTaGGGAACAACAGCATCAAAG +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTMRVFF*GTTASK
Trigger: CTTTGATGCTGTTGTTCCTCAAAAGAAGACTCTCAT...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATGGAATGCCAGGGCTATaGAGTGGGAGTGGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYGMPGL*SGSGWV
Trigger: AACCCACCCACTCCCACTTCATAGCCCTGGCATTCC...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGACAATCCCTCAGTGGTaGACAAGCACATACATACAT +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQETIPQW*TSTYIH
Trigger: ATGTATGTATGTGCTTGTTCACCACTGAGGGATTGT...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAGGTCCACCTCCTTCCTaGAAACGAAGCCCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGGPPPS*KRSPKG
Trigger: CCCTTTGGGGCTTCGTTTTCAGGAAGGAGGTGGACC...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGACTGGCCCTTTAAGTTaGAAGTCTTCATCCTCATCC +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKTGPLS*KSSSSS
Trigger: GGATGAGGATGAAGACTTTCAACTTAAAGGGCCAGT...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCTTCTTTGAGGTTTGTTaGCAGATTACTCCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTFFEVC*QITPVL
Trigger: AAGCACAGGAGTAATCTGTCAACAAACCTCAAAGAA...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATCAAGTTCCATGGGATaGCATGATATCTTCTCACCT +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLSSSMG*HDIFSP
Trigger: AGGTGAGAAGATATCATGGCATCCCATGGAACTTGA...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTACCCTGTATAGGGGAATaGCAGGGCTATGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLPCIGE*QGYEVG
Trigger: TCCCACTTCATAGCCCTGGCATTCCCCTATACAGGG...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAACTCATGACTCTAGCTaGATATGTAGCAAAGGATGG +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLTHDSS*ICSKGW
Trigger: CCATCCTTTGCTACATATGCAGCTAGAGTCATGAGT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATGGCAAGTTCTCCTCGTaGAGGGAATGTGCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYGKFSS*RECAQW
Trigger: CCACTGGGCACATTCCCTGCACGAGGAGAACTTGCC...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATGTCTGTATAACATCTaGCCAGGATCTTCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLCLYNI*PGSSGF
Trigger: AAAGCCAGAAGATCCTGGGCAGATGTTATACAGACA...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAACACCTTTAGCTCCTTaGATACTTTCTCTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLTPLAP*ILSLAP
Trigger: AGGAGCTAGAGAAAGTATGCAAGGAGCTAAAGGTGT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAACCCAGAGTGTCTTGTaGCAGCAGGAACAGGGACAA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLTQSVL*QQEQGQ
Trigger: TTGTCCCTGTTCCTGCTGGCACAAGACACTCTGGGT...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCCTGGTCCATTCTATTTaGAGTTCTGTAGGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTLVHSI*SSVGFF
Trigger: AAAGAAGCCTACAGAACTCCAAATAGAATGGACCAG...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGTATAGTAGCCTGGGCTaGCATTTGTGTTCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQEYSSLG*HLCSLC
Trigger: ACAAAGAGAACACAAATGCCAGCCCAGGCTACTATA...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTACAATCCCACCAACACTaGAAGAGTGTTCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLQSHQH*KSVHLS
Trigger: AGAAAGATGAACACTCTTCCAGTGTTGGTGGGATTG...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATGGGGCAGATCTCAGTaGAGGGTCCCAAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGWGRSQ*RVPRSP
Trigger: TGGGGATCTTGGGACCCTCCACTGAGATCTGCCCCA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCATTCCATGGGATGCCATaGTATCTTCTCACCTCTGTG +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPFHGMP*YLLTSV
Trigger: CACAGAGGTGAGAAGATATCATGGCATCCCATGGAA...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGACAATCCCTCAGTGGTaGACAAGCACATACATACAT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMTIPQW*TSTYIH
Trigger: ATGTATGTATGTGCTTGTTCACCACTGAGGGATTGT...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATCAAGGCACAAGATaGATGGCAGTCAAAGAACAA +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLYQGTR*MAVKEQ
Trigger: TTGTTCTTTGACTGCCATTCATCTTGTGCCTTGATA...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCGAAGAAAAGCAATGTTaGAATGATAGAGTATGGTGG +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTEEKQC*NDRVWW
Trigger: CCACCATACTCTATCATTTCAACATTGCTTTTCTTC...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCGTGCATTTGTTGTTCTaGTTATTATGTGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTVHLLF*LLCVRR
Trigger: TCTCCTGACACATAATAATCAGAACAACAAATGCAC...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAGTCTCAATTAGGTTTTaGTTGCTGTTCAAAGACACC +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLVSIRF*LLFKDT
Trigger: GGTGTCTTTGAACAGCAATCAAAACCTAATTGAGAC...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGACTCATGACTCTAGCTaGATATGTAGCAAAGGATGG +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKTHDSS*ICSKGW
Trigger: CCATCCTTTGCTACATATGCAGCTAGAGTCATGAGT...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAGCCAGCGTGCTCTCCTaGTTGGACTGGTCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGASVLS*LDWSLK
Trigger: TTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGC...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGTGTCTGTATAACATCTaGCCAGGATCTTCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKCLYNI*PGSSGF
Trigger: AAAGCCAGAAGATCCTGGGCAGATGTTATACAGACA...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGACACCTTTAGCTCCTTaGATACTTTCTCTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMTPLAP*ILSLAP
Trigger: AGGAGCTAGAGAAAGTATGCAAGGAGCTAAAGGTGT...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAGCTCTATTGCTTCTGTaGCCAGCGTGCTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGALLLL*PACSPA
Trigger: AGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGC...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATGCTCTATTGCTTCTGTaGCCAGCGTGCTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYALLLL*PACSPA
Trigger: AGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGC...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCTTAGTCTTTTCATTGTaGCCTAGATTTCCTGGACAT +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTLVFSL*PRFPGH
Trigger: ATGTCCAGGAAATCTAGGCCACAATGAAAAGACTAA...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGCAATCCCACCAACACTaGAAGAGTGTTCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMQSHQH*KSVHLS
Trigger: AGAAAGATGAACACTCTTCCAGTGTTGGTGGGATTG...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAAATAGTGTCTGGGTTTaGTGGTTGTTTATGAGATGG +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLNSVWV*WLFMRW
Trigger: CCATCTCATAAACAACCACCAAACCCAGACACTATT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGAGACTGTCTCCCACATaGTTAGAAGGAAAGTCTCAA +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMRLSPT*LEGKSQ
Trigger: TTGAGACTTTCCTTCTAACCATGTGGGAGACAGTCT...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGGAAGCCCTTGGAATTTaGGGTCAAATATCTACCATC +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMEALGI*GQISTI
Trigger: GATGGTAGATATTTGACCCCAAATTCCAAGGGCTTC...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGTTCCATGGGATGCCATaGTATCTTCTCACCTCTGTG +
Preference number: 2 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVFHGMP*YLLTSV
Trigger: CACAGAGGTGAGAAGATATCATGGCATCCCATGGAA...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGTATCAAGGCACAAGATaGATGGCAGTCAAAGAACAA +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKYQGTR*MAVKEQ
Trigger: TTGTTCTTTGACTGCCATTCATCTTGTGCCTTGATA...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAGAAGAAAAGCAATGTTaGAATGATAGAGTATGGTGG +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLEEKQC*NDRVWW
Trigger: CCACCATACTCTATCATTTCAACATTGCTTTTCTTC...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAGCTTGGACTGGTCTCTaGAAGACCCGGGATACAAGA +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGAWTGL*KTRDTR
Trigger: TCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGC...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGTTCTTTGAGGTTTGTTaGCAGATTACTCCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKFFEVC*QITPVL
Trigger: AAGCACAGGAGTAATCTGTCAACAAACCTCAAAGAA...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAGAGGAACCGCCACACTaGTTTCCACAGTGGTTGTAC +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGEEPPH*FPQWLY
Trigger: GTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTC...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAGCTCTTCCTTCTTCTTaGGTTTCATGTGTTTTACAA +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLALPSS*VSCVLQ
Trigger: TTGTAAAACACATGAAACTCAAGAAGAAGGAAGAGC...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTGTGGGCACAAGGGAATaGATACAGGCATGCACTATA +
Preference number: 2 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGVGTRE*IQACTI
Trigger: TATAGTGCATGCCTGTATGCATTCCCTTGTGCCCAC...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCTTTAAATCTGTATCTTaGTTTTCAGGTGTGTTGGGT +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTFKSVS*FSGVLG
Trigger: ACCCAACACACCTGAAAAGCAAGATACAGATTTAAA...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGGAAGTATCCACACATTaGTCTTCCTTCTTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMEVSTH*SSFFLS
Trigger: ACTCAAGAAGAAGGAAGAGCAATGTGTGGATACTTC...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATGGCTCCGTACACTATaGAAAATCAAAAACAGCTTA +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLWLRTL*KIKNSL
Trigger: TAAGCTGTTTTTGATTTTGCATAGTGTACGGAGCCA...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAGGGAGGAGAGGCCTCTaGTCCTGTGGAGGTTTTATA +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGGRRGL*SCGGFI
Trigger: TATAAAACCTCCACAGGACCAGAGGCCTCTCCTCCC...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGCCATCTGGTAATCTCTaGCTGGAGCTTGTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVPSGNL*LELVSP
Trigger: AGGAGAAACAAGCTCCAGCCAGAGATTACCAGATGG...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCTTTTTAGGTCTTGGATaGCTTTGTTCAATTCCATCA +
Preference number: 2 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTFLGLG*LCSIPS
Trigger: TGATGGAATTGAACAAAGCCATCCAAGACCTAAAAA...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGTCCCTTTTTAGGTCTTaGATGGCTTTGTTCAATTCC +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMSLFRS*MALFNS
Trigger: GGAATTGAACAAAGCCATCCAAGACCTAAAAAGGGA...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGTTAGTCTTTTCATTGTaGCCTAGATTTCCTGGACAT +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQELVFSL*PRFPGH
Trigger: ATGTCCAGGAAATCTAGGCCACAATGAAAAGACTAA...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGCTGGTCCATTCTATTTaGAGTTCTGTAGGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMLVHSI*SSVGFF
Trigger: AAAGAAGCCTACAGAACTCCAAATAGAATGGACCAG...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGCTGGTCCATTCTATTTaGAGTTCTGTAGGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKLVHSI*SSVGFF
Trigger: AAAGAAGCCTACAGAACTCCAAATAGAATGGACCAG...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAAAATGCAATAGTGTCTaGGTTTGGTGGTTGTTTATG +
Preference number: 2 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLKCNSV*VWWLFM
Trigger: CATAAACAACCACCAAACCCAGACACTATTGCATTT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTATTATGGTGGAAACCATaGCAGCATTCAGGCAGGCAT +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLLWWKP*QHSGRH
Trigger: ATGCCTGCCTGAATGCTGCCATGGTTTCCACCATAA...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGCCTCTACCAGCATCATaGGATATCATTTTAAATCTG +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKPLPAS*DIILNL
Trigger: CAGATTTAAAATGATATCTCATGATGCTGGTAGAGG...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGGTGCATTTGTTGTTCTaGTTATTATGTGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMVHLLF*LLCVRR
Trigger: TCTCCTGACACATAATAATCAGAACAACAAATGCAC...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGCTAGTTCCATCCATTTaGCTGATATTTCATGAAGTC +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKLVPSI*LIFHEV
Trigger: GACTTCATGAAATATCAGTCAAATGGATGGAACTAG...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCATCAAGTTCCATGGGATaGCATGATATCTTCTCACCT +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPSSSMG*HDIFSP
Trigger: AGGTGAGAAGATATCATGGCATCCCATGGAACTTGA...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAACTCATGACTCTAGCTaGATATGTAGCAAAGGATGG +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPTHDSS*ICSKGW
Trigger: CCATCCTTTGCTACATATGCAGCTAGAGTCATGAGT...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGTTTAAATCTGTATCTTaGTTTTCAGGTGTGTTGGGT +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQEFKSVS*FSGVLG
Trigger: ACCCAACACACCTGAAAAGCAAGATACAGATTTAAA...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGCAACTTATCAGTGAGTaGACATCATGTGTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMQLISE*TSCVFF
Trigger: AAAGAACACACATGATGTGCACTCACTGATAAGTTG...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGCAACTTATCAGTGAGTaGACATCATGTGTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKQLISE*TSCVFF
Trigger: AAAGAACACACATGATGTGCACTCACTGATAAGTTG...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAAATGTTGCTGCCAAATaGAATAGTGTCTGGGTTTGG +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPNVAAK*NSVWVW
Trigger: CCAAACCCAGACACTATTGCATTTGGCAGCAACATT...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGGCCAATATTATTTCCTaGCCTCATCATGTACATATA +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQEANIIS*PHHVHI
Trigger: TATATGTACATGATGAGGCCAGGAAATAATATTGGC...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGTATTCATGTTCTCTATaGAATCTTCTGCACCTGAGA +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMYSCSL*NLLHLR
Trigger: TCTCAGGTGCAGAAGATTCCATAGAGAACATGAATA...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGTTAGTCTTTTCATTGTaGCCTAGATTTCCTGGACAT +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKLVFSL*PRFPGH
Trigger: ATGTCCAGGAAATCTAGGCCACAATGAAAAGACTAA...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGCTTCTTTTATGTTCATaGGCATCTCTTTCTTTAGGT +
Preference number: 2 (lower is better)
Translates to: GACVLITSWNIFWVYAQELLLCS*ASLSLG
Trigger: ACCTAAAGAAAGAGATGCCCATGAACATAAAAGAAG...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCATCCCCCTCCTTGTGTTaGTGTTTTCCCTTTAATATC +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPSPSLC*CFPFNI
Trigger: GATATTAAAGGGAAAACACCAACACAAGGAGGGGGA...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGCTTGTACACTTGGAATaGATAGAGCAATGGAAAATG +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMLVHLE*IEQWKM
Trigger: CATTTTCCATTGCTCTATCCATTCCAAGTGTACAAG...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAAACAGTGCCACTCCCTaGGCCAAGCATATTCAAACC +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGNSATP*AKHIQT
Trigger: GGTTTGAATATGCTTGGCCCAGGGAGTGGCACTGTT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 90 bp TTGCATTTAGTCCCTCCTAATAACAGGGAAGAAATAGCATGTTTATaGAGCTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTT +
Preference number: 2 (lower is better)
Translates to: LHLVPPNNREEIACL*SFYSGGSTFMTWML
Trigger: AAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAGCTCAATAAACATGCTATTTCTTCCCTGTTATTAGGAGGGACTAAATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTACAGAGCTGTGGGACATaGAGAAATAGGTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLQSCGT*RNRSTK
Trigger: TTTAGTAGACCTATTTCTTCATGTCCCACAGCTCTG...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp TGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTACATATTCAAGTTCCATGGGATaGCATGATATCTTCTCACCT +
Preference number: 2 (lower is better)
Translates to: WQSKNNSQYYFLASSCTYSSSMG*HDIFSP
Trigger: AGGTGAGAAGATATCATGGCATCCCATGGAACTTGA...ATATGTACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGTTTAAATCTGTATCTTaGTTTTCAGGTGTGTTGGGT +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMFKSVS*FSGVLG
Trigger: ACCCAACACACCTGAAAAGCAAGATACAGATTTAAA...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGGCCAATATTATTTCCTaGCCTCATCATGTACATATA +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMANIIS*PHHVHI
Trigger: TATATGTACATGATGAGGCCAGGAAATAATATTGGC...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGACCATCTGGTAATCTCTaGCTGGAGCTTGTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGPSGNL*LELVSP
Trigger: AGGAGAAACAAGCTCCAGCCAGAGATTACCAGATGG...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGATTCCATCACATGTTTaGTTGTGTTTTCCTGTAATG +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKIPSHV*LCFPVM
Trigger: CATTACAGGAAAACACAACCAAACATGTGATGGAAT...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGTTTTTAGGTCTTGGATaGCTTTGTTCAATTCCATCA +
Preference number: 2 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMFLGLG*LCSIPS
Trigger: TGATGGAATTGAACAAAGCCATCCAAGACCTAAAAA...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCATCCCTTTTTAGGTCTTaGATGGCTTTGTTCAATTCC +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPSLFRS*MALFNS
Trigger: GGAATTGAACAAAGCCATCCAAGACCTAAAAAGGGA...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGCTTCTTTTATGTTCATaGGCATCTCTTTCTTTAGGT +
Preference number: 2 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKLLLCS*ASLSLG
Trigger: ACCTAAAGAAAGAGATGCCCATGAACATAAAAGAAG...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTATCCCCCTCCTTGTGTTaGTGTTTTCCCTTTAATATC +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLSPSLC*CFPFNI
Trigger: GATATTAAAGGGAAAACACCAACACAAGGAGGGGGA...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAAGACTGTCTCCCACATaGTTAGAAGGAAAGTCTCAA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLRLSPT*LEGKSQ
Trigger: TTGAGACTTTCCTTCTAACCATGTGGGAGACAGTCT...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATTATGGTGGAAACCATaGCAGCATTCAGGCAGGCAT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGLWWKP*QHSGRH
Trigger: ATGCCTGCCTGAATGCTGCCATGGTTTCCACCATAA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAGAAGAAAAGCAATGTTaGAATGATAGAGTATGGTGG +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPEEKQC*NDRVWW
Trigger: CCACCATACTCTATCATTTCAACATTGCTTTTCTTC...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAACTGGCCCTTTAAGTTaGAAGTCTTCATCCTCATCC +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGTGPLS*KSSSSS
Trigger: GGATGAGGATGAAGACTTTCAACTTAAAGGGCCAGT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAGTGCATTTGTTGTTCTaGTTATTATGTGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPVHLLF*LLCVRR
Trigger: TCTCCTGACACATAATAATCAGAACAACAAATGCAC...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCACTAGTTCCATCCATTTaGCTGATATTTCATGAAGTC +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPLVPSI*LIFHEV
Trigger: GACTTCATGAAATATCAGTCAAATGGATGGAACTAG...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTATCCAGAGTTCTCAAATaGCCACAGAAGACATCATAT +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLSRVLK*PQKTSY
Trigger: ATATGATGTCTTCTGTGGTCATTTGAGAACTCTGGA...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAGAAGTATCCACACATTaGTCTTCCTTCTTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLEVSTH*SSFFLS
Trigger: ACTCAAGAAGAAGGAAGAGCAATGTGTGGATACTTC...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCATGGCTCCGTACACTATaGAAAATCAAAAACAGCTTA +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPWLRTL*KIKNSL
Trigger: TAAGCTGTTTTTGATTTTGCATAGTGTACGGAGCCA...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTATCCCTTTTTAGGTCTTaGATGGCTTTGTTCAATTCC +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLSLFRS*MALFNS
Trigger: GGAATTGAACAAAGCCATCCAAGACCTAAAAAGGGA...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCATATTCATGTTCTCTATaGAATCTTCTGCACCTGAGA +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPYSCSL*NLLHLR
Trigger: TCTCAGGTGCAGAAGATTCCATAGAGAACATGAATA...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAAAATGCAATAGTGTCTaGGTTTGGTGGTTGTTTATG +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPKCNSV*VWWLFM
Trigger: CATAAACAACCACCAAACCCAGACACTATTGCATTT...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTACCATTATCATTATGGTaGAAACCATGGCAGCATTCA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLPLSLW*KPWQHS
Trigger: TGAATGCTGCCATGGTTTCCACCATAATGATAATGG...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAACAATCCCTCAGTGGTaGACAAGCACATACATACAT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGTIPQW*TSTYIH
Trigger: ATGTATGTATGTGCTTGTTCACCACTGAGGGATTGT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATACAATCCCTCAGTGGTaGACAAGCACATACATACAT +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYTIPQW*TSTYIH
Trigger: ATGTATGTATGTGCTTGTTCACCACTGAGGGATTGT...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTCCTCTACCAGCATCATaGGATATCATTTTAAATCTG +
Preference number: 2 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGPLPAS*DIILNL
Trigger: CAGATTTAAAATGATATCTCATGATGCTGGTAGAGG...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGCCTCTACCAGCATCATaGGATATCATTTTAAATCTG +
Preference number: 2 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVPLPAS*DIILNL
Trigger: CAGATTTAAAATGATATCTCATGATGCTGGTAGAGG...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAGTGCATTTGTTGTTCTaGTTATTATGTGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLVHLLF*LLCVRR
Trigger: TCTCCTGACACATAATAATCAGAACAACAAATGCAC...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTGTGCATTTGTTGTTCTaGTTATTATGTGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGVHLLF*LLCVRR
Trigger: TCTCCTGACACATAATAATCAGAACAACAAATGCAC...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAGCTCTTCCTTCTTCTTaGGTTTCATGTGTTTTACAA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLALPSS*VSCVLQ
Trigger: TTGTAAAACACATGAAACTCAAGAAGAAGGAAGAGC...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATTCAAGTTCCATGGGATaGCATGATATCTTCTCACCT +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYSSSMG*HDIFSP
Trigger: AGGTGAGAAGATATCATGGCATCCCATGGAACTTGA...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATCAAGTTCCATGGGATaGCATGATATCTTCTCACCT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGSSSMG*HDIFSP
Trigger: AGGTGAGAAGATATCATGGCATCCCATGGAACTTGA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATTGTCTGTATAACATCTaGCCAGGATCTTCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYCLYNI*PGSSGF
Trigger: AAAGCCAGAAGATCCTGGGCAGATGTTATACAGACA...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTACAACTTATCAGTGAGTaGACATCATGTGTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLQLISE*TSCVFF
Trigger: AAAGAACACACATGATGTGCACTCACTGATAAGTTG...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAAGACACCATGACCAATaGAACTCTTATAAGAAGCAA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLRHHDQ*NSYKKQ
Trigger: TTGCTTCTTATAAGAGTTGCATTGGTCATGGTGTCT...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAGTTATAAAGTTGGATTaGGTAGTAGCCATCCATCAA +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLVIKLD*VVAIHQ
Trigger: TTGATGGATGGCTACTACGCAATCCAACTTTATAAC...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAATATGTAGCAAAGGATaGCCTAGTAAATCATCAATG +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPICSKG*PSKSSM
Trigger: CATTGATGATTTACTAGGCCATCCTTTGCTACATAT...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAGCCAATATTATTTCCTaGCCTCATCATGTACATATA +
Preference number: 2 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPANIIS*PHHVHI
Trigger: TATATGTACATGATGAGGCCAGGAAATAATATTGGC...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATAAGGCACAAGATGAATaGCAGTCAAAGAACAACAGC +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYKAQDE*QSKNNS
Trigger: GCTGTTGTTCTTTGACTGCCATTCATCTTGTGCCTT...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTTTAGTCTTTTCATTGTaGCCTAGATTTCCTGGACAT +
Preference number: 2 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGLVFSL*PRFPGH
Trigger: ATGTCCAGGAAATCTAGGCCACAATGAAAAGACTAA...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATTATAGTAGCCTGGGCTaGCATTTGTGTTCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYYSSLG*HLCSLC
Trigger: ACAAAGAGAACACAAATGCCAGCCCAGGCTACTATA...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATATAGTAGCCTGGGCTaGCATTTGTGTTCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGYSSLG*HLCSLC
Trigger: ACAAAGAGAACACAAATGCCAGCCCAGGCTACTATA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGACAATCCCACCAACACTaGAAGAGTGTTCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGQSHQH*KSVHLS
Trigger: AGAAAGATGAACACTCTTCCAGTGTTGGTGGGATTG...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAAAATGCAATAGTGTCTaGGTTTGGTGGTTGTTTATG +
Preference number: 2 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLKCNSV*VWWLFM
Trigger: CATAAACAACCACCAAACCCAGACACTATTGCATTT...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAGAAGCCCTTGGAATTTaGGGTCAAATATCTACCATC +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGEALGI*GQISTI
Trigger: GATGGTAGATATTTGACCCCAAATTCCAAGGGCTTC...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATTGTTGAAAGAATATTaGGATTCATTCTGGCCGCCA +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGLLKEY*DSFWPP
Trigger: TGGCGGCCAGAATGAATCTCAATATTCTTTCAACAA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATCCAGAGTTCTCAAATaGCCACAGAAGACATCATAT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGSRVLK*PQKTSY
Trigger: ATATGATGTCTTCTGTGGTCATTTGAGAACTCTGGA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTTTTAAATCTGTATCTTaGTTTTCAGGTGTGTTGGGT +
Preference number: 2 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGFKSVS*FSGVLG
Trigger: ACCCAACACACCTGAAAAGCAAGATACAGATTTAAA...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTATTCCATCACATGTTTaGTTGTGTTTTCCTGTAATG +
Preference number: 2 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGIPSHV*LCFPVM
Trigger: CATTACAGGAAAACACAACCAAACATGTGATGGAAT...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTCTTCTTTTATGTTCATaGGCATCTCTTTCTTTAGGT +
Preference number: 2 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGLLLCS*ASLSLG
Trigger: ACCTAAAGAAAGAGATGCCCATGAACATAAAAGAAG...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAAATAGTGTCTGGGTTTaGTGGTTGTTTATGAGATGG +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGNSVWV*WLFMRW
Trigger: CCATCTCATAAACAACCACCAAACCCAGACACTATT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAGAAGAAAAGCAATGTTaGAATGATAGAGTATGGTGG +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGEEKQC*NDRVWW
Trigger: CCACCATACTCTATCATTTCAACATTGCTTTTCTTC...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGACCTCTACCAGCATCATaGGATATCATTTTAAATCTG +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGPLPAS*DIILNL
Trigger: CAGATTTAAAATGATATCTCATGATGCTGGTAGAGG...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR TCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATGTGCATTTGTTGTTCTaGTTATTATGTGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYVHLLF*LLCVRR
Trigger: TCTCCTGACACATAATAATCAGAACAACAAATGCAC...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATGGCTCCGTACACTATaGAAAATCAAAAACAGCTTA +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGWLRTL*KIKNSL
Trigger: TAAGCTGTTTTTGATTTTGCATAGTGTACGGAGCCA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAAGACACCATGACCAATaGAACTCTTATAAGAAGCAA +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGRHHDQ*NSYKKQ
Trigger: TTGCTTCTTATAAGAGTTGCATTGGTCATGGTGTCT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGACTTGTACACTTGGAATaGATAGAGCAATGGAAAATG +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGLVHLE*IEQWKM
Trigger: CATTTTCCATTGCTCTATCCATTCCAAGTGTACAAG...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR GCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATTTAAATCTGTATCTTaGTTTTCAGGTGTGTTGGGT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGFKSVS*FSGVLG
Trigger: ACCCAACACACCTGAAAAGCAAGATACAGATTTAAA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATGCCAATATTATTTCCTaGCCTCATCATGTACATATA +
Preference number: 2 (lower is better)
Translates to: CWCFPFNILSRAGFIERYANIIS*PHHVHI
Trigger: TATATGTACATGATGAGGCCAGGAAATAATATTGGC...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAATTCCATCACATGTTTaGTTGTGTTTTCCTGTAATG +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGIPSHV*LCFPVM
Trigger: CATTACAGGAAAACACAACCAAACATGTGATGGAAT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGACTTCTTTTATGTTCATaGGCATCTCTTTCTTTAGGT +
Preference number: 2 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGLLLCS*ASLSLG
Trigger: ACCTAAAGAAAGAGATGCCCATGAACATAAAAGAAG...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp CGAAGCCCCAAAGGGACCCTGTCCAAGAAGCTCTATTaGTTCTGTGGCCAGCGTGCTCTCCTGCTTGGACTG +
Preference number: 3 (lower is better)
Translates to: RSPKGTLSKKLY*FCGQRALLLGL
Trigger: CAGTCCAAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCCTTTGGGGCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp GTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTaGAGGGAATGTGCCCAGTGGTCTGGAACTCAGGTC +
Preference number: 3 (lower is better)
Translates to: VVTALSAGKFSS*RECAQWSGTQV
Trigger: GACCTGAGTTCCAGACCACTGGGCACATTCCCTGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp CAGCAGGAACAGGGACAAAGGAAACCCAGCGACCAGTaGCTGGAATTCATACTGGTTGGCGCCACTCCCGTG +
Preference number: 3 (lower is better)
Translates to: QQEQGQRKPSDQ*LEFILVGATPV
Trigger: CACGGGAGTGGCGCCAACCAGTATGAATTCCAGCCACTGGTCGCTGGGTTTCCTTTGTCCCTGTTCCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp TGCCCAGTGGTCTGGAACTCAGGTCCACCTCCTTCCTaGAAACGAAGCCCCAAAGGGACCCTGTCCAAGAAG +
Preference number: 3 (lower is better)
Translates to: CPVVWNSGPPPS*KRSPKGTLSKK
Trigger: CTTCTTGGACAGGGTCCCTTTGGGGCTTCGTTTTCAGGAAGGAGGTGGACCTGAGTTCCAGACCACTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp GAATTCATACTGGTTGGCGCCACTCCCGTGGCATTTTaGGGCAGATCTCAGTGGAGGGTCCCAAGATCCCCA +
Preference number: 3 (lower is better)
Translates to: EFILVGATPVAF*GRSQWRVPRSP
Trigger: TGGGGATCTTGGGACCCTCCACTGAGATCTGCCCCAAAATGCCACGGGAGTGGCGCCAACCAGTATGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp AGGAACAGGGACAAAGGAAACCCAGCGACCAGTGGCTaGAATTCATACTGGTTGGCGCCACTCCCGTGGCAT +
Preference number: 3 (lower is better)
Translates to: RNRDKGNPATSG*NSYWLAPLPWH
Trigger: ATGCCACGGGAGTGGCGCCAACCAGTATGAATTCCAGCCACTGGTCGCTGGGTTTCCTTTGTCCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp TACTTACTCCTAGGTCCCAGTGGTCACAGCACTCTCTaGAGGCAAGTTCTCCTCGTGCAGGGAATGTGCCCA +
Preference number: 3 (lower is better)
Translates to: YLLLGPSGHSTL*RQVLLVQGMCP
Trigger: TGGGCACATTCCCTGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGTAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp AGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTaGTTGGACTGGTCTCTGAAAGACCCGGGATACAAG +
Preference number: 3 (lower is better)
Translates to: RSSIASVASVLS*LDWSLKDPGYK
Trigger: CTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp ATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTGGACTaGTCTCTGAAAGACCCGGGATACAAGATCCAAAGT +
Preference number: 3 (lower is better)
Translates to: IASVASVLSCLD*SLKDPGYKIQS
Trigger: ACTTTGGATCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGCCACAGAAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp TGTTGGGTTACCCAGGACTCCCTGTGGTGGGCATACTaGGTTCTGATGATGCCCAGTGGTCTTGGTTTTGAT +
Preference number: 3 (lower is better)
Translates to: CWVTQDSLWWAY*VLMMPSGLGFD
Trigger: ATCAAAACCAAGACCACTGGGCATCATCAGAACCCAGTATGCCCACCACAGGGAGTCCTGGGTAACCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp ATGGCAGCATTCAGGCAGGCATGGAGCAGGAGTTATTaGGAGCTCAACTTCTTGTCCCAAAGGCAGCTAGGA +
Preference number: 3 (lower is better)
Translates to: MAAFRQAWSRSY*ELNFLSQRQLG
Trigger: TCCTAGCTGCCTTTGGGACAAGAAGTTGAGCTCTCAATAACTCCTGCTCCATGCCTGCCTGAATGCTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp GTTCCTCCTATAGGGTTGCAGACACCTTTAGCTCCTTaGATACTTTCTCTAGCTCCTGCATTAGGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: VPPIGLQTPLAP*ILSLAPALGAL
Trigger: CAAGGCCCCTAATGCAGGAGCTAGAGAAAGTATGCAAGGAGCTAAAGGTGTCTGCAACCCTATAGGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTAATGAGAGTCTTCTTTaGAGGAACAACAGCATCAAA +
Preference number: 3 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLNESLL*RNNSIK
Trigger: TTTGATGCTGTTGTTCCTCAAAAGAAGACTCTCATT...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACTACTGGCCCTTTAAGTaGAAAGTCTTCATCCTCATC +
Preference number: 3 (lower is better)
Translates to: GTATLISTVVVPACNPTNYWPFK*KVFILI
Trigger: GATGAGGATGAAGACTTTCAACTTAAAGGGCCAGTA...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCCTGGGCTGGCATTaGTGTTCTCTTTGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTSLGWH*CSLCVC
Trigger: ACAGACACAAAGAGAACACAAATGCCAGCCCAGGCT...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp CATGATCTTCGCAAGACCAAGGGTCTCTCCTTCCATTaGTGGCTGACTAGGCCATCTTCTGCTTCATATGCA +
Preference number: 3 (lower is better)
Translates to: HDLRKTKGLSFH*WLTRPSSASYA
Trigger: TGCATATGAAGCAGAAGATGGCCTAGTCAGCCATCAATGGAAGGAGAGACCCTTGGTCTTGCGAAGATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp AGGGATCCTGTTTCAAGCCTTAGCATGCCCTATACCTaGATCGCAGTAGAAGCCCTTGGAATTTGGGGTCAA +
Preference number: 3 (lower is better)
Translates to: RDPVSSLSMPYT*IAVEALGIWGQ
Trigger: TTGACCCCAAATTCCAAGGGCTTCTACTGCGATTCAGGTATAGGGCATGCTAAGGCTTGAAACAGGATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp ACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTaGAATCCCACCAACACTGGAAGAGTGTTCATCTTT +
Preference number: 3 (lower is better)
Translates to: TATLISTVVVPA*NPTNTGRVFIF
Trigger: AAAGATGAACACTCTTCCAGTGTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp GGGACTCATGACTCTAGCTGCATATGTAGCAAAGGATaGCCTAGTAAATCATCAATGGGAGGAGAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: GTHDSSCICSKG*PSKSSMGGEAS
Trigger: AGAGGCCTCTCCTCCCATTGATGATTTACTAGGCCATCCTTTGCTACATATGCAGCTAGAGTCATGAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGAGCCTGGGCTGGCATTaGTGTTCTCTTTGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: GACVLITSWNIFWVYAQESLGWH*CSLCVC
Trigger: ACAGACACAAAGAGAACACAAATGCCAGCCCAGGCT...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACATCTCATGTATTCTGTaGCTGATGCTCATATCTATG +
Preference number: 3 (lower is better)
Translates to: GTATLISTVVVPACNPTNISCIL*LMLISM
Trigger: CATAGATATGAGCATCAGCAACAGAATACATGAGAT...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGAGCCTGGGCTGGCATTaGTGTTCTCTTTGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKSLGWH*CSLCVC
Trigger: ACAGACACAAAGAGAACACAAATGCCAGCCCAGGCT...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACTTGCAGCTATCTTCTTaGAGGTTTGTTGACAGATTA +
Preference number: 3 (lower is better)
Translates to: GTATLISTVVVPACNPTNLQLSS*RFVDRL
Trigger: TAATCTGTCAACAAACCTCAAAGAAGATAGCTGCAA...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp CCAAATGCAATAGTGTCTGGGTTTGGTGGTTGTTTATaGGATGGATCCCCAGGTGGGGAAGTCTCTAGATGT +
Preference number: 3 (lower is better)
Translates to: PNAIVSGFGGCL*DGSPGGEVSRC
Trigger: ACATCTAGAGACTTCCCCACCTGGGGATCCATCTCATAAACAACCACCAAACCCAGACACTATTGCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp GCATATGTAGCAAAGGATGGCCTAGTAAATCATCAATaGGAGGAGAGGCCTCTGGTCCTGTGGAGGTTTTAT +
Preference number: 3 (lower is better)
Translates to: AYVAKDGLVNHQ*EERPLVLWRFY
Trigger: ATAAAACCTCCACAGGACCAGAGGCCTCTCCTCCCATTGATGATTTACTAGGCCATCCTTTGCTACATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTaGGTATATGCCCAGGAGAGGTATTGCTGGATGCTC +
Preference number: 3 (lower is better)
Translates to: GACVLITSWNIF*VYAQERYCWML
Trigger: GAGCATCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp AATGTTGCTGCCAAATGCAATAGTGTCTGGGTTTGGTaGTTGTTTATGAGATGGATCCCCAGGTGGGGAAGT +
Preference number: 3 (lower is better)
Translates to: NVAAKCNSVWVW*LFMRWIPRWGS
Trigger: ACTTCCCCACCTGGGGATCCATCTCATAAACAACCACCAAACCCAGACACTATTGCATTTGGCAGCAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp CATCTTCTGCTTCATATGCAACTAGAGGCAGAGCTCTaGGGGCTACTCCTTAGTTCATATTGTTGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: HLLLHMQLEAEL*GLLLSSYCCSS
Trigger: GGAGGAACAACAATATGAACTAAGGAGTAGCCCCCAGAGCTCTGCCTCTAGTTGCATATGAAGCAGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp CAAATATCTACCATCTGGAGGCCAATAGGCTCCCTGTaGGAGACAGCTTTTGACCCTTTTATTGAACCTCTG +
Preference number: 3 (lower is better)
Translates to: QISTIWRPIGSL*ETAFDPFIEPL
Trigger: CAGAGGTTCAATAAAAGGGTCAAAAGCTGTCTCTCACAGGGAGCCTATTGGCCTCCAGATGGTAGATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp CACAGGATGATTCTTTATAAGTCAAGTTCCATGGGATaGCATGATATCTTCTCACCTCTGTGGGCACAAGGG +
Preference number: 3 (lower is better)
Translates to: HRMILYKSSSMG*HDIFSPLWAQG
Trigger: CCCTTGTGCCCACAGAGGTGAGAAGATATCATGGCATCCCATGGAACTTGACTTATAAAGAATCATCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp TGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATaGCCAGGAGAGGTATTGCTGGATGCTCCGGTAGTA +
Preference number: 3 (lower is better)
Translates to: CPYYKLEHLLGI*PGEVLLDAPVV
Trigger: TACTACCGGAGCATCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp ATCATTTTAAATCTGTATCTTGCTTTTCAGGTGTGTTaGGTTACCCAGGACTCCCTGTGGTGGGCATACTGG +
Preference number: 3 (lower is better)
Translates to: IILNLYLAFQVC*VTQDSLWWAYW
Trigger: CCAGTATGCCCACCACAGGGAGTCCTGGGTAACCCAACACACCTGAAAAGCAAGATACAGATTTAAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp TATCCGCAAAATGTTGCTGCCAAATGCAATAGTGTCTaGGTTTGGTGGTTGTTTATGAGATGGATCCCCAGG +
Preference number: 3 (lower is better)
Translates to: YPQNVAAKCNSV*VWWLFMRWIPR
Trigger: CCTGGGGATCCATCTCATAAACAACCACCAAACCCAGACACTATTGCATTTGGCAGCAACATTTTGCGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp TGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTaGCCTTTATATGAAGGAAGCTGGAAAACTGATAGC +
Preference number: 3 (lower is better)
Translates to: WWQHIYDLDAFH*PLYEGSWKTDS
Trigger: GCTATCAGTTTTCCAGCTTCCTTCATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATTTCTATCTCCAGAGTaGTCTCCCTTTGGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLFLSPE*SPFGFS
Trigger: AGAAAACCCAAAGGGAGACAACTCTGGAGATAGAAA...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAATTAGGATACTGTCCTaGCAGCTATCTTCTTTGAGG +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLIRILS*QLSSLR
Trigger: CCTCAAAGAAGATAGCTGCAAGGACAGTATCCTAAT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAGTCTGGGTTTGGTGGTaGTTTATGAGATGGATCCCC +
Preference number: 3 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPVWVWW*FMRWIP
Trigger: GGGGATCCATCTCATAAACAACCACCAAACCCAGAC...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTACATCCACTTTTATATTaGCCAGGTACTGACATAGCC +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLHPLLY*PGTDIA
Trigger: GGCTATGTCAGTACCTGGCAAATATAAAAGTGGATG...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp GAATCTTATGTTTCCCTTTCACCATCTGGTAATCTCTaGCTGGAGCTTGTTTCTCCTGTGATTCTGTTAGCC +
Preference number: 3 (lower is better)
Translates to: ESYVSLSPSGNL*LELVSPVILLA
Trigger: GGCTAACAGAATCACAGGAGAAACAAGCTCCAGCCAGAGATTACCAGATGGTGAAAGGGAAACATAAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp CAAAAGTTCAGTCCATTATCATTATGGTGGAAACCATaGCAGCATTCAGGCAGGCATGGAGCAGGAGTTATT +
Preference number: 3 (lower is better)
Translates to: QKFSPLSLWWKP*QHSGRHGAGVI
Trigger: AATAACTCCTGCTCCATGCCTGCCTGAATGCTGCCATGGTTTCCACCATAATGATAATGGACTGAACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp TTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTaGAAACCATGGCAGCATTCAGGCAGGCATGGAGCA +
Preference number: 3 (lower is better)
Translates to: LQVQKFSPLSLW*KPWQHSGRHGA
Trigger: TGCTCCATGCCTGCCTGAATGCTGCCATGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp AGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATaGTGGAAACCATGGCAGCATTCAGGCAGGCATGGA +
Preference number: 3 (lower is better)
Translates to: RLQVQKFSPLSL*WKPWQHSGRHG
Trigger: TCCATGCCTGCCTGAATGCTGCCATGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp TTGAGCTTCTATTCTGGTGGCAGCACATTTATGACCTaGATGCTTTCCACTGGCCTTTATATGAAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: LSFYSGGSTFMT*MLSTGLYMKEA
Trigger: AGCTTCCTTCATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAGCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCAATGAGAGTCTTCTTTaGAGGAACAACAGCATCAAA +
Preference number: 3 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTNESLL*RNNSIK
Trigger: TTTGATGCTGTTGTTCCTCAAAAGAAGACTCTCATT...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTACCATCACATGTTTGGTaGTGTTTTCCTGTAATGCTT +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLPSHVW*CFPVML
Trigger: AAGCATTACAGGAAAACACAACCAAACATGTGATGG...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGTCTGGTCCATTCTATTaGGAGTTCTGTAGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKSGPFY*EFCRLL
Trigger: AAGAAGCCTACAGAACTCCAAATAGAATGGACCAGA...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGCATCCACTTTTATATTaGCCAGGTACTGACATAGCC +
Preference number: 3 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMHPLLY*PGTDIA
Trigger: GGCTATGTCAGTACCTGGCAAATATAAAAGTGGATG...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAATTGAATTAGTACCTTaGATAGCCTACCTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLIELVP*IAYLSR
Trigger: TCTGGACAGGTAGGCTATCAAAGGTACTAATTCAAT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp CTGCTTGGAACAGAGAAGCAGAGAGTAGCTATGCCTTaGGTCTTGCTGATAAAATGCATGCACATTAGAAGA +
Preference number: 3 (lower is better)
Translates to: LLGTEKQRVAMP*VLLIKCMHIRR
Trigger: TCTTCTAATGTGCATGCATTTTATCAGCAAGACTCAAGGCATAGCTACTCTCTGCTTCTCTGTTCCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp ATATCAGGGTCCTATCCGCAAAATGTTGCTGCCAAATaGAATAGTGTCTGGGTTTGGTGGTTGTTTATGAGA +
Preference number: 3 (lower is better)
Translates to: ISGSYPQNVAAK*NSVWVWWLFMR
Trigger: TCTCATAAACAACCACCAAACCCAGACACTATTGCATTTGGCAGCAACATTTTGCGGATAGGACCCTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp GGAAGAAATAGCATGTTTATTGAGCTTCTATTCTGGTaGCAGCACATTTATGACCTGGATGCTTTCCACTGG +
Preference number: 3 (lower is better)
Translates to: GRNSMFIELLFW*QHIYDLDAFHW
Trigger: CCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAGCTCAATAAACATGCTATTTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTACCAGTGGTCTTGGTTTaGATAGTAAGAATCTTATGT +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLPVVLV*IVRILC
Trigger: ACATAAGATTCTTACTATCAAAACCAAGACCACTGG...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAATCTCATGTATTCTGTaGCTGATGCTCATATCTATG +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLISCIL*LMLISM
Trigger: CATAGATATGAGCATCAGCAACAGAATACATGAGAT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGGCTTTTATATGTTACTaGACCATTTTCCCTTACTGC +
Preference number: 3 (lower is better)
Translates to: GACVLITSWNIFWVYAQEAFICY*TIFPYC
Trigger: GCAGTAAGGGAAAATGGTCAAGTAACATATAAAAGC...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAGCTTTTATATGTTACTaGACCATTTTCCCTTACTGC +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLAFICY*TIFPYC
Trigger: GCAGTAAGGGAAAATGGTCAAGTAACATATAAAAGC...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGGCATTTGTGTTCTCTTaGTGTCTGTATAACATCTGC +
Preference number: 3 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMAFVFS*CLYNIC
Trigger: GCAGATGTTATACAGACACAAAGAGAACACAAATGC...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAGTCTCTATTCCTCTGTaGAGGGACATCTGTGTTCTT +
Preference number: 3 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPVSIPL*RDICVL
Trigger: AAGAACACAGATGTCCCTCAACAGAGGAATAGAGAC...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATGCTCTTCCTTCTTCTaGAGTTTCATGTGTTTTACA +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLCSSFF*SFMCFT
Trigger: TGTAAAACACATGAAACTCAAGAAGAAGGAAGAGCA...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAATAAGATCTACATCATaGGGGATGTATCTTCACAGA +
Preference number: 3 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLIRSTS*GMYLHR
Trigger: TCTGTGAAGATACATCCCCAATGATGTAGATCTTAT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp TATGAACATAGTGGAGCATGTGTCCTTATTACAAGTTaGAACATCTTCTGGGTATATGCCCAGGAGAGGTAT +
Preference number: 3 (lower is better)
Translates to: YEHSGACVLITS*NIFWVYAQERY
Trigger: ATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCCACTATGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGAATGAGAGTCTTCTTTaGAGGAACAACAGCATCAAA +
Preference number: 3 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKNESLL*RNNSIK
Trigger: TTTGATGCTGTTGTTCCTCAAAAGAAGACTCTCATT...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCATCTGGTCCATTCTATTaGGAGTTCTGTAGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPSGPFY*EFCRLL
Trigger: AAGAAGCCTACAGAACTCCAAATAGAATGGACCAGA...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAATTAGGATACTGTCCTaGCAGCTATCTTCTTTGAGG +
Preference number: 3 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPIRILS*QLSSLR
Trigger: CCTCAAAGAAGATAGCTGCAAGGACAGTATCCTAAT...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTTTTCTATCTCCAGAGTaGTCTCCCTTTGGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGFLSPE*SPFGFS
Trigger: AGAAAACCCAAAGGGAGACAACTCTGGAGATAGAAA...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCAGCATTTGTGTTCTCTTaGTGTCTGTATAACATCTGC +
Preference number: 3 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPAFVFS*CLYNIC
Trigger: GCAGATGTTATACAGACACAAAGAGAACACAAATGC...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAAGAAGTATCCACACATaGCTCTTCCTTCTTCTTGAG +
Preference number: 3 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLRSIHT*LFLLLE
Trigger: CTCAAGAAGAAGGAAGAGCAATGTGTGGATACTTCT...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp GATACTGTCCTTGCAGCTATCTTCTTTGAGGTTTGTTaGCAGATTACTCCTGTGCTTTTTCTAGGCTGTAAT +
Preference number: 3 (lower is better)
Translates to: DTVLAAIFFEVC*QITPVLFLGCN
Trigger: ATTACAGCCTAGAAAAAGCACAGGAGTAATCTGTCAACAAACCTCAAAGAAGATAGCTGCAAGGACAGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTACCATCACATGTTTGGTaGTGTTTTCCTGTAATGCTT +
Preference number: 3 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLPSHVW*CFPVML
Trigger: AAGCATTACAGGAAAACACAACCAAACATGTGATGG...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTCCATCACATGTTTGGTaGTGTTTTCCTGTAATGCTT +
Preference number: 3 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGPSHVW*CFPVML
Trigger: AAGCATTACAGGAAAACACAACCAAACATGTGATGG...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAGCATTTGTGTTCTCTTaGTGTCTGTATAACATCTGC +
Preference number: 3 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLAFVFS*CLYNIC
Trigger: GCAGATGTTATACAGACACAAAGAGAACACAAATGC...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTATTTGTTGAAAGAATATaGAGATTCATTCTGGCCGCC +
Preference number: 3 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLFVERI*RFILAA
Trigger: GGCGGCCAGAATGAATCTCAATATTCTTTCAACAAA...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp GTATTTTGGAAAGAAAATAACTGGCGCTACACAGGATaGTTCTTTATAAGTCAAGTTCCATGGGATGCCATG +
Preference number: 3 (lower is better)
Translates to: VFWKENNWRYTG*FFISQVPWDAM
Trigger: CATGGCATCCCATGGAACTTGACTTATAAAGAATCATCCTGTGTAGCGCCAGTTATTTTCTTTCCAAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp TCAGAATTAGGATACTGTCCTTGCAGCTATCTTCTTTaGGGTTTGTTGACAGATTACTCCTGTGCTTTTTCT +
Preference number: 3 (lower is better)
Translates to: SELGYCPCSYLL*GLLTDYSCAFS
Trigger: AGAAAAAGCACAGGAGTAATCTGTCAACAAACCTCAAAGAAGATAGCTGCAAGGACAGTATCCTAATTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp GATTTAGGGTATGTCACTTTTTCAGTGCATAGCACGTaGATGATTGAATTAGTACCTTTGATAGCCTACCTG +
Preference number: 3 (lower is better)
Translates to: DLGYVTFSVHST*MIELVPLIAYL
Trigger: CAGGTAGGCTATCAAAGGTACTAATTCAATCATTCACGTGCTATGCACTGAAAAAGTGACATACCCTAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR GCA 72 bp TTTCCCCTTCTAAGAAGGAGAGAAGTATCCACACATTaGTCTTCCTTCTTCTTGAGTTTCATGTGTTTTACA +
Preference number: 3 (lower is better)
Translates to: FPLLRRREVSTH*SSFFLSFMCFT
Trigger: TGTAAAACACATGAAACTCAAGAAGAAGGAAGAGCAATGTGTGGATACTTCTCTCCTTCTTAGAAGGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGAATGAGAGTCTTCTTTaGAGGAACAACAGCATCAAA +
Preference number: 3 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVNESLL*RNNSIK
Trigger: TTTGATGCTGTTGTTCCTCAAAAGAAGACTCTCATT...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp TGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTACATATAATGAGAGTCTTCTTTaGAGGAACAACAGCATCAAA +
Preference number: 3 (lower is better)
Translates to: WQSKNNSQYYFLASSCTYNESLL*RNNSIK
Trigger: TTTGATGCTGTTGTTCCTCAAAAGAAGACTCTCATT...ATATGTACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATTTTCTATCTCCAGAGTaGTCTCCCTTTGGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: CWCFPFNILSRAGFIERYFLSPE*SPFGFS
Trigger: AGAAAACCCAAAGGGAGACAACTCTGGAGATAGAAA...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTATCTCATGTATTCTGTaGCTGATGCTCATATCTATG +
Preference number: 3 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGISCIL*LMLISM
Trigger: CATAGATATGAGCATCAGCAACAGAATACATGAGAT...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATCTGGTCCATTCTATTaGGAGTTCTGTAGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGSGPFY*EFCRLL
Trigger: AAGAAGCCTACAGAACTCCAAATAGAATGGACCAGA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTGCTTTTATATGTTACTaGACCATTTTCCCTTACTGC +
Preference number: 3 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGAFICY*TIFPYC
Trigger: GCAGTAAGGGAAAATGGTCAAGTAACATATAAAAGC...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAATTAGGATACTGTCCTaGCAGCTATCTTCTTTGAGG +
Preference number: 3 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGIRILS*QLSSLR
Trigger: CCTCAAAGAAGATAGCTGCAAGGACAGTATCCTAAT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGACATCCACTTTTATATTaGCCAGGTACTGACATAGCC +
Preference number: 3 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGHPLLY*PGTDIA
Trigger: GGCTATGTCAGTACCTGGCAAATATAAAAGTGGATG...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CCA 72 bp AAAAAGTCCATACTATGTTGTAGGTTGCTTTCAATGTaGGCTAAAAATCTAACAGACCCAATTTACCTGAGG +
Preference number: 3 (lower is better)
Translates to: KKSILCCRLLSM*AKNLTDPIYLR
Trigger: CCTCAGGTAAATTGGGTCTGTTAGATTTTTAGCCCACATTGAAAGCAACCTACAACATAGTATGGACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGACCATCACATGTTTGGTaGTGTTTTCCTGTAATGCTT +
Preference number: 3 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGPSHVW*CFPVML
Trigger: AAGCATTACAGGAAAACACAACCAAACATGTGATGG...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATCCATCACATGTTTGGTaGTGTTTTCCTGTAATGCTT +
Preference number: 3 (lower is better)
Translates to: CWCFPFNILSRAGFIERYPSHVW*CFPVML
Trigger: AAGCATTACAGGAAAACACAACCAAACATGTGATGG...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGATTTGTTGAAAGAATATaGAGATTCATTCTGGCCGCC +
Preference number: 3 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGFVERI*RFILAA
Trigger: GGCGGCCAGAATGAATCTCAATATTCTTTCAACAAA...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAATTGAATTAGTACCTTaGATAGCCTACCTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGIELVP*IAYLSR
Trigger: TCTGGACAGGTAGGCTATCAAAGGTACTAATTCAAT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATCCAGTGGTCTTGGTTTaGATAGTAAGAATCTTATGT +
Preference number: 3 (lower is better)
Translates to: CWCFPFNILSRAGFIERYPVVLV*IVRILC
Trigger: ACATAAGATTCTTACTATCAAAACCAAGACCACTGG...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAATCTCATGTATTCTGTaGCTGATGCTCATATCTATG +
Preference number: 3 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGISCIL*LMLISM
Trigger: CATAGATATGAGCATCAGCAACAGAATACATGAGAT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR-3UTR CAA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATATCTCATGTATTCTGTaGCTGATGCTCATATCTATG +
Preference number: 3 (lower is better)
Translates to: CWCFPFNILSRAGFIERYISCIL*LMLISM
Trigger: CATAGATATGAGCATCAGCAACAGAATACATGAGAT...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR TCA 72 bp TCAGTGATATTTCTAGCAGTTCAGAGCTGTGGGACATaGAGAAATAGGTCTACTAAAGTAAAAGATAAGTTG +
Preference number: 3 (lower is better)
Translates to: SVIFLAVQSCGT*RNRSTKVKDKL
Trigger: CAACTTATCTTTTACTTTAGTAGACCTATTTCTTCATGTCCCACAGCTCTGAACTGCTAGAAATATCACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp GGAATTCATACTGGTTGGCGCCACTCCCGTGGCATTTaGGGGCAGATCTCAGTGGAGGGTCCCAAGATCCCC +
Preference number: 4 (lower is better)
Translates to: GIHTGWRHSRGI*GQISVEGPKIP
Trigger: GGGGATCTTGGGACCCTCCACTGAGATCTGCCCCAAAATGCCACGGGAGTGGCGCCAACCAGTATGAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTCTGATTGTGACAGCTTaGAACACACTGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLLIVTA*NTLRRQ
Trigger: CTGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAG...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp AGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTaGGACTGGTCTCTGAAAGACCCGGGATACAAGATC +
Preference number: 4 (lower is better)
Translates to: SSIASVASVLSC*DWSLKDPGYKI
Trigger: GATCTTGTATCCCGGGTCTTTCAGAGACCAGTCCAAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp ACCACTCCCGCTTTCTGGTCCTGGTATTCCCCTGTATaGGGGCACATGATCTTCGCAAGACCAAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TTPAFWSWYSPV*GHMIFARPRVS
Trigger: AGAGACCCTTGGTCTTGCGAAGATCATGTGCCCCAATACAGGGGAATACCAGGACCAGAAAGCGGGAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp CATGGCAGCATTCAGGCAGGCATGGAGCAGGAGTTATaGAGAGCTCAACTTCTTGTCCCAAAGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: HGSIQAGMEQEL*RAQLLVPKAAR
Trigger: CCTAGCTGCCTTTGGGACAAGAAGTTGAGCTCTCAATAACTCCTGCTCCATGCCTGCCTGAATGCTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCAATGCTCTCATGTGGTTaGTGCTATGAAGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: TPRSQWSQHSLQASSPRAMLSCG*CYEDAC
Trigger: GCAAGCATCTTCATAGCATCAACCACATGAGAGCAT...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTAAACATCCCCTCCAGTaGGAAACATCATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLKHPLQ*ETSLCE
Trigger: TTCACATAATGATGTTTCTCACTGGAGGGGATGTTT...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCAAAACATCCCCTCCAGTaGGAAACATCATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: TPRSQWSQHSLQASSPRAKHPLQ*ETSLCE
Trigger: TTCACATAATGATGTTTCTCACTGGAGGGGATGTTT...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACATGTGGTTGATGCTATaGAGATGCTTGCATTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTATLISTVVVPACNPTNMWLML*RCLHCL
Trigger: GAGGCAATGCAAGCATCTTCATAGCATCAACCACAT...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACAAACAAGAAACATGTTaGCCAGGACTCCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: GTATLISTVVVPACNPTNKQETC*PGLQTQ
Trigger: CTGGGTTTGGAGTCCTGGCCAACATGTTTCTTGTTT...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCATACTTGTGGTTAGCATaGCTCCTACAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: TPRSQWSQHSLQASSPRAYLWLA*LLQETH
Trigger: ATGTGTTTCTTGTAGGAGCCATGCTAACCACAAGTA...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTTACTTGTGGTTAGCATaGCTCCTACAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLYLWLA*LLQETH
Trigger: ATGTGTTTCTTGTAGGAGCCATGCTAACCACAAGTA...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp GTTGCTGCCAAATGCAATAGTGTCTGGGTTTGGTGGTaGTTTATGAGATGGATCCCCAGGTGGGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: VAAKCNSVWVWW*FMRWIPRWGSL
Trigger: GAGACTTCCCCACCTGGGGATCCATCTCATAAACAACCACCAAACCCAGACACTATTGCATTTGGCAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp TGGAATCAACATCTGTTCCAACAAACCCAGAGTGTCTaGTGCCAGCAGGAACAGGGACAAAGGAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: WNQHLFQQTQSV*CQQEQGQRKPS
Trigger: GCTGGGTTTCCTTTGTCCCTGTTCCTGCTGGCACAAGACACTCTGGGTTTGTTGGAACAGATGTTGATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACCCATGTATGTACTTGTaGTTAGCATGGCTCCTACAA +
Preference number: 4 (lower is better)
Translates to: GTATLISTVVVPACNPTNPCMYL*LAWLLQ
Trigger: TTGTAGGAGCCATGCTAACCACAAGTACATACATGG...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp AACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTaGCAATCCCACCAACACTGGAAGAGTGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: NRHTDFHSGCTS*QSHQHWKSVHL
Trigger: AAGATGAACACTCTTCCAGTGTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTACTGATTGTGACAGCTTaGAACACACTGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLLIVTA*NTLRRQ
Trigger: CTGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAG...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp GAGAGTTTTGCTCGGTATAGTAGCCTGGGCTGGCATTaGTGTTCTCTTTGTGTCTGTATAACATCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ESFARYSSLGWH*CSLCVCITSAQ
Trigger: CTGGGCAGATGTTATACAGACACAAAGAGAACACAAATGCCAGCCCAGGCTACTATACCGAGCAAAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTAATGCTCTCATGTGGTTaGTGCTATGAAGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLMLSCG*CYEDAC
Trigger: GCAAGCATCTTCATAGCATCAACCACATGAGAGCAT...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGAAACAAGAAACATGTTaGCCAGGACTCCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: GACVLITSWNIFWVYAQEKQETC*PGLQTQ
Trigger: CTGGGTTTGGAGTCCTGGCCAACATGTTTCTTGTTT...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACCAAGAAACACATCTCTaGAAGTTGTCACTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: GTATLISTVVVPACNPTNQETHL*KLSLLK
Trigger: TTTTAACAGTGACAACTTCCAGAGATGTGTTTCTTG...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCCCATGTATGTACTTGTaGTTAGCATGGCTCCTACAA +
Preference number: 4 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTPCMYL*LAWLLQ
Trigger: TTGTAGGAGCCATGCTAACCACAAGTACATACATGG...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGTTCATCACAAACTTCTaGAGAGTCAGGATGACTGGA +
Preference number: 4 (lower is better)
Translates to: GACVLITSWNIFWVYAQEFITNF*RVRMTG
Trigger: TCCAGTCATCCTGACTCTTCAGAAGTTTGTGATGAA...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATTCATCACAAACTTCTaGAGAGTCAGGATGACTGGA +
Preference number: 4 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLFITNF*RVRMTG
Trigger: TCCAGTCATCCTGACTCTTCAGAAGTTTGTGATGAA...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GATGAATGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTCTGATTGTGACAGCTTaGAACACACTGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: DEWQSKNNSQYYFLASSCLIVTA*NTLRRQ
Trigger: CTGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAG...ACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCATTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTACCATGTATGTACTTGTaGTTAGCATGGCTCCTACAA +
Preference number: 4 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLPCMYL*LAWLLQ
Trigger: TTGTAGGAGCCATGCTAACCACAAGTACATACATGG...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGCCATGTATGTACTTGTaGTTAGCATGGCTCCTACAA +
Preference number: 4 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKPCMYL*LAWLLQ
Trigger: TTGTAGGAGCCATGCTAACCACAAGTACATACATGG...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GATGAATGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTATGCTCTCATGTGGTTaGTGCTATGAAGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: DEWQSKNNSQYYFLASSCMLSCG*CYEDAC
Trigger: GCAAGCATCTTCATAGCATCAACCACATGAGAGCAT...ACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCCAAGAAACACATCTCTaGAAGTTGTCACTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTQETHL*KLSLLK
Trigger: TTTTAACAGTGACAACTTCCAGAGATGTGTTTCTTG...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGTACTTGTGGTTAGCATaGCTCCTACAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMYLWLA*LLQETH
Trigger: ATGTGTTTCTTGTAGGAGCCATGCTAACCACAAGTA...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp GTCCCTCCTAATAACAGGGAAGAAATAGCATGTTTATaGAGCTTCTATTCTGGTGGCAGCACATTTATGACC +
Preference number: 4 (lower is better)
Translates to: VPPNNREEIACL*SFYSGGSTFMT
Trigger: GGTCATAAATGTGCTGCCACCAGAATAGAAGCTCAATAAACATGCTATTTCTTCCCTGTTATTAGGAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGAAGTTGCCTTACACTTaGAGTCATTCTCAATGTTCA +
Preference number: 4 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKKLPYT*SHSQCS
Trigger: TGAACATTGAGAATGACTTCAAGTGTAAGGCAACTT...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGAAGTTGCCTTACACTTaGAGTCATTCTCAATGTTCA +
Preference number: 4 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMKLPYT*SHSQCS
Trigger: TGAACATTGAGAATGACTTCAAGTGTAAGGCAACTT...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp TGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTACATATATGTGGTTGATGCTATaGAGATGCTTGCATTGCCTC +
Preference number: 4 (lower is better)
Translates to: WQSKNNSQYYFLASSCTYMWLML*RCLHCL
Trigger: GAGGCAATGCAAGCATCTTCATAGCATCAACCACAT...ATATGTACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTATGTGGTTGATGCTATaGAGATGCTTGCATTGCCTC +
Preference number: 4 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGMWLML*RCLHCL
Trigger: GAGGCAATGCAAGCATCTTCATAGCATCAACCACAT...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTATGCTCTCATGTGGTTaGTGCTATGAAGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGMLSCG*CYEDAC
Trigger: GCAAGCATCTTCATAGCATCAACCACATGAGAGCAT...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGATGCTCTCATGTGGTTaGTGCTATGAAGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVMLSCG*CYEDAC
Trigger: GCAAGCATCTTCATAGCATCAACCACATGAGAGCAT...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GATGAATGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTTTCATCACAAACTTCTaGAGAGTCAGGATGACTGGA +
Preference number: 4 (lower is better)
Translates to: DEWQSKNNSQYYFLASSCFITNF*RVRMTG
Trigger: TCCAGTCATCCTGACTCTTCAGAAGTTTGTGATGAA...ACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCATTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp TGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTACATATAAACAAGAAACATGTTaGCCAGGACTCCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: WQSKNNSQYYFLASSCTYKQETC*PGLQTQ
Trigger: CTGGGTTTGGAGTCCTGGCCAACATGTTTCTTGTTT...ATATGTACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGAAACAAGAAACATGTTaGCCAGGACTCCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVKQETC*PGLQTQ
Trigger: CTGGGTTTGGAGTCCTGGCCAACATGTTTCTTGTTT...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAACTGATTGTGACAGCTTaGAACACACTGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKLIVTA*NTLRRQ
Trigger: CTGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAG...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGACTGATTGTGACAGCTTaGAACACACTGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGLIVTA*NTLRRQ
Trigger: CTGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAG...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp CTTCTATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTACAAGAAACACATCTCTaGAAGTTGTCACTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: LLFWWQHIYDLDAFHWPLQETHL*KLSLLK
Trigger: TTTTAACAGTGACAACTTCCAGAGATGTGTTTCTTG...TAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCACCATGTATGTACTTGTaGTTAGCATGGCTCCTACAA +
Preference number: 4 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPPCMYL*LAWLLQ
Trigger: TTGTAGGAGCCATGCTAACCACAAGTACATACATGG...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp TGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTACATATTTCATCACAAACTTCTaGAGAGTCAGGATGACTGGA +
Preference number: 4 (lower is better)
Translates to: WQSKNNSQYYFLASSCTYFITNF*RVRMTG
Trigger: TCCAGTCATCCTGACTCTTCAGAAGTTTGTGATGAA...ATATGTACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTTTCATCACAAACTTCTaGAGAGTCAGGATGACTGGA +
Preference number: 4 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGFITNF*RVRMTG
Trigger: TCCAGTCATCCTGACTCTTCAGAAGTTTGTGATGAA...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GAAGTTTGTCTCTGTAACTCCTTCCATGGGTCCTTTCTTTCCCCTTCTAAGAAGCAAGAAACACATCTCTaGAAGTTGTCACTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: EVCLCNSFHGSFLSPSKKQETHL*KLSLLK
Trigger: TTTTAACAGTGACAACTTCCAGAGATGTGTTTCTTG...CTTCTTAGAAGGGGAAAGAAAGGACCCATGGAAGGAGTTACAGAGACAAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCATACTTGTGGTTAGCATaGCTCCTACAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPYLWLA*LLQETH
Trigger: ATGTGTTTCTTGTAGGAGCCATGCTAACCACAAGTA...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp AAAAATAGAGACAGGAGAAACATTGAGACTATGATCTaGGTACAGGTCACAGAGAGAGATGCACTATCAAGG +
Preference number: 4 (lower is better)
Translates to: KNRDRRNIETMI*VQVTERDALSR
Trigger: CCTTGATAGTGCATCTCTCTCTGTGACCTGTACCAAGATCATAGTCTCAATGTTTCTCCTGTCTCTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp GTCAGAATTAGGATACTGTCCTTGCAGCTATCTTCTTaGAGGTTTGTTGACAGATTACTCCTGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VRIRILSLQLSS*RFVDRLLLCFF
Trigger: GAAAAAGCACAGGAGTAATCTGTCAACAAACCTCAAAGAAGATAGCTGCAAGGACAGTATCCTAATTCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp TGTAAATGTACAACATTTTCTGTCTCTATTCCTCTGTaGAGGGACATCTGTGTTCTTTCCAGCTTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CKCTTFSVSIPL*RDICVLSSFWL
Trigger: TAGCCAGAAGCTGGAAAGAACACAGATGTCCCTCAACAGAGGAATAGAGACAGAAAATGTTGTACATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp CTTTCCCCTTCTAAGAAGGAGAGAAGTATCCACACATaGCTCTTCCTTCTTCTTGAGTTTCATGTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: LSPSKKERSIHT*LFLLLEFHVFY
Trigger: GTAAAACACATGAAACTCAAGAAGAAGGAAGAGCAATGTGTGGATACTTCTCTCCTTCTTAGAAGGGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp CATCCAATAGATGACTGTGAGCATCCACTTTTATATTaGCCAGGTACTGACATAGCCTCACAAGAGATAACT +
Preference number: 4 (lower is better)
Translates to: HPIDDCEHPLLY*PGTDIASQEIT
Trigger: AGTTATCTCTTGTGAGGCTATGTCAGTACCTGGCAAATATAAAAGTGGATGCTCACAGTCATCTATTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTAAAACATCCCCTCCAGTaGGAAACATCATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLKHPLQ*ETSLCE
Trigger: TTCACATAATGATGTTTCTCACTGGAGGGGATGTTT...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GATGAATGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTAAGTTGCCTTACACTTaGAGTCATTCTCAATGTTCA +
Preference number: 4 (lower is better)
Translates to: DEWQSKNNSQYYFLASSCKLPYT*SHSQCS
Trigger: TGAACATTGAGAATGACTTCAAGTGTAAGGCAACTT...ACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCATTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAAATGTGGTTGATGCTATaGAGATGCTTGCATTGCCTC +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKMWLML*RCLHCL
Trigger: GAGGCAATGCAAGCATCTTCATAGCATCAACCACAT...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAATGTGGTTGATGCTATaGAGATGCTTGCATTGCCTC +
Preference number: 4 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGMWLML*RCLHCL
Trigger: GAGGCAATGCAAGCATCTTCATAGCATCAACCACAT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAAATGCTCTCATGTGGTTaGTGCTATGAAGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKMLSCG*CYEDAC
Trigger: GCAAGCATCTTCATAGCATCAACCACATGAGAGCAT...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATATGCTCTCATGTGGTTaGTGCTATGAAGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: CWCFPFNILSRAGFIERYMLSCG*CYEDAC
Trigger: GCAAGCATCTTCATAGCATCAACCACATGAGAGCAT...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAAAAACAAGAAACATGTTaGCCAGGACTCCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKKQETC*PGLQTQ
Trigger: CTGGGTTTGGAGTCCTGGCCAACATGTTTCTTGTTT...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp CTGGAATATAGTTCCACCCAAATTCAAGGACGTTCTACCTCAGTGATATTTCTATACTTGTGGTTAGCATaGCTCCTACAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: LEYSSTQIQGRSTSVIFLYLWLA*LLQETH
Trigger: ATGTGTTTCTTGTAGGAGCCATGCTAACCACAAGTA...TAGAAATATCACTGAGGTAGAACGTCCTTGAATTTGGGTGGAACTATATTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGTACTTGTGGTTAGCATaGCTCCTACAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVYLWLA*LLQETH
Trigger: ATGTGTTTCTTGTAGGAGCCATGCTAACCACAAGTA...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp TGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTACATATAAGTTGCCTTACACTTaGAGTCATTCTCAATGTTCA +
Preference number: 4 (lower is better)
Translates to: WQSKNNSQYYFLASSCTYKLPYT*SHSQCS
Trigger: TGAACATTGAGAATGACTTCAAGTGTAAGGCAACTT...ATATGTACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGAAGTTGCCTTACACTTaGAGTCATTCTCAATGTTCA +
Preference number: 4 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVKLPYT*SHSQCS
Trigger: TGAACATTGAGAATGACTTCAAGTGTAAGGCAACTT...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAATTCATCACAAACTTCTaGAGAGTCAGGATGACTGGA +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKFITNF*RVRMTG
Trigger: TCCAGTCATCCTGACTCTTCAGAAGTTTGTGATGAA...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATTTCATCACAAACTTCTaGAGAGTCAGGATGACTGGA +
Preference number: 4 (lower is better)
Translates to: CWCFPFNILSRAGFIERYFITNF*RVRMTG
Trigger: TCCAGTCATCCTGACTCTTCAGAAGTTTGTGATGAA...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGGTCTAGGTTACAGGTTCAAAAGTTCAGTCCATTATCATTATGGTGGAAACCACAAGAAACACATCTCTaGAAGTTGTCACTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: GSRLQVQKFSPLSLWWKPQETHL*KLSLLK
Trigger: TTTTAACAGTGACAACTTCCAGAGATGTGTTTCTTG...TGGTTTCCACCATAATGATAATGGACTGAACTTTTGAACCTGTAACCTAGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAACCATGTATGTACTTGTaGTTAGCATGGCTCCTACAA +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKPCMYL*LAWLLQ
Trigger: TTGTAGGAGCCATGCTAACCACAAGTACATACATGG...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp ATTGTTTCTACTTCCCTTTTTAGGTCTTGGATGGCTTaGTTCAATTCCATCACATGTTTGGTTGTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: IVSTSLFRSWMA*FNSITCLVVFS
Trigger: GGAAAACACAACCAAACATGTGATGGAATTGAACAAAGCCATCCAAGACCTAAAAAGGGAAGTAGAAACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAAAAACATCCCCTCCAGTaGGAAACATCATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKKHPLQ*ETSLCE
Trigger: TTCACATAATGATGTTTCTCACTGGAGGGGATGTTT...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATAAACATCCCCTCCAGTaGGAAACATCATTATGTGAA +
Preference number: 4 (lower is better)
Translates to: CWCFPFNILSRAGFIERYKHPLQ*ETSLCE
Trigger: TTCACATAATGATGTTTCTCACTGGAGGGGATGTTT...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAATACTTGTGGTTAGCATaGCTCCTACAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKYLWLA*LLQETH
Trigger: ATGTGTTTCTTGTAGGAGCCATGCTAACCACAAGTA...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR TCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAAAAGTTGCCTTACACTTaGAGTCATTCTCAATGTTCA +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKKLPYT*SHSQCS
Trigger: TGAACATTGAGAATGACTTCAAGTGTAAGGCAACTT...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp CCTGTTATTTTTGTTGTCAGAATTAGGATACTGTCCTaGCAGCTATCTTCTTTGAGGTTTGTTGACAGATTA +
Preference number: 4 (lower is better)
Translates to: PVIFVVRIRILS*QLSSLRFVDRL
Trigger: TAATCTGTCAACAAACCTCAAAGAAGATAGCTGCAAGGACAGTATCCTAATTCTGACAACAAAAATAACAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp ATTTATGGGATTAAACAACTGATAAGATCTACATCATaGGGGATGTATCTTCACAGAGGCAGTAACATCACT +
Preference number: 4 (lower is better)
Translates to: IYGIKQLIRSTS*GMYLHRGSNIT
Trigger: AGTGATGTTACTGCCTCTGTGAAGATACATCCCCAATGATGTAGATCTTATCAGTTGTTTAATCCCATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp AGGAGAGAAGTATCCACACATTGCTCTTCCTTCTTCTaGAGTTTCATGTGTTTTACAAATTATATTGTAGGT +
Preference number: 4 (lower is better)
Translates to: RREVSTHCSSFF*SFMCFTNYIVG
Trigger: ACCTACAATATAATTTGTAAAACACATGAAACTCAAGAAGAAGGAAGAGCAATGTGTGGATACTTCTCTCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
3UTR CAA 72 bp ATGATACTATTCAAAAAGTCCATACTATGTTGTAGGTaGCTTTCAATGTGGGCTAAAAATCTAACAGACCCA +
Preference number: 4 (lower is better)
Translates to: MILFKKSILCCR*LSMWAKNLTDP
Trigger: TGGGTCTGTTAGATTTTTAGCCCACATTGAAAGCAACCTACAACATAGTATGGACTTTTTGAATAGTATCAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAACAAGAAACACATCTCTaGAAGTTGTCACTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: GMHTGMHYRINRVHINKKQETHL*KLSLLK
Trigger: TTTTAACAGTGACAACTTCCAGAGATGTGTTTCTTG...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CCA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGACAAGAAACACATCTCTaGAAGTTGTCACTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGQETHL*KLSLLK
Trigger: TTTTAACAGTGACAACTTCCAGAGATGTGTTTCTTG...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTACTGATTGTGACAGCTaGGAACACACTGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLTDCDS*EHTEEA
Trigger: TGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAGT...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTCAAACAAGAAACATGTaGGCCAGGACTCCAAACCCA +
Preference number: 5 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLQTRNM*ARTPNP
Trigger: TGGGTTTGGAGTCCTGGCCAACATGTTTCTTGTTTG...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp ACTCCTAGGTCCCAGTGGTCACAGCACTCTCTGCAGGCAAGTTCTCCTCGTGCAACTCCTCTGATGATATaGTTCATGGGTAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: TPRSQWSQHSLQASSPRATPLMI*FMGKSE
Trigger: CTCACTCTTACCCATGAACAATATCATCAGAGGAGT...TGCACGAGGAGAACTTGCCTGCAGAGAGTGCTGTGACCACTGGGACCTAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCACTGATTGTGACAGCTaGGAACACACTGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTTDCDS*EHTEEA
Trigger: TGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAGT...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGGACCCTGTCCAAGAAGCTCTATTGCTTCTGTGGCCAGCGTGCTCTCCTGCTTATAGATGGTAGTGTTTaGACTGAAGGTTTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: GTLSKKLYCFCGQRALLLIDGSV*TEGFSA
Trigger: TGCTGAAAAACCTTCAGTCAAAACACTACCATCTAT...AAGCAGGAGAGCACGCTGGCCACAGAAGCAATAGAGCTTCTTGGACAGGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCCAAACAAGAAACATGTaGGCCAGGACTCCAAACCCA +
Preference number: 5 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTQTRNM*ARTPNP
Trigger: TGGGTTTGGAGTCCTGGCCAACATGTTTCTTGTTTG...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGACTGATTGTGACAGCTaGGAACACACTGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMTDCDS*EHTEEA
Trigger: TGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAGT...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGAACCGCCACACTGATTTCCACAGTGGTTGTACCAGCTTGCAATCCCACCAACCTACTGAAGGACAAATaGAAAGACCACATACATAAG +
Preference number: 5 (lower is better)
Translates to: GTATLISTVVVPACNPTNLLKDK*KDHIHK
Trigger: CTTATGTATGTGGTCTTTCAATTTGTCCTTCAGTAG...GTTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAATCAGTGTGGCGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGCAAACAAGAAACATGTaGGCCAGGACTCCAAACCCA +
Preference number: 5 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMQTRNM*ARTPNP
Trigger: TGGGTTTGGAGTCCTGGCCAACATGTTTCTTGTTTG...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp ACTATGCCCAATTTTCTGAGGAACCGCCACACTGATTTCCACAGTGGTTGTACCACTCCTCTGATGATATaGTTCATGGGTAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: TMPNFLRNRHTDFHSGCTTPLMI*FMGKSE
Trigger: CTCACTCTTACCCATGAACAATATCATCAGAGGAGT...GGTACAACCACTGTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGGGCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGAGCATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATGCCCAGGAGATAGATGGTAGTGTTTaGACTGAAGGTTTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: GACVLITSWNIFWVYAQEIDGSV*TEGFSA
Trigger: TGCTGAAAAACCTTCAGTCAAAACACTACCATCTAT...CTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAAGTGAACCAAGGTCAGTaGACAGGAGATCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: GMHTGMHYRINRVHINKKVNQGQ*TGDQVC
Trigger: ACAGACCTGATCTCCTGTCAACTGACCTTGGTTCAC...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAAACTGATTGTGACAGCTaGGAACACACTGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GMHTGMHYRINRVHINKKTDCDS*EHTEEA
Trigger: TGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAGT...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp ATAAAATGCATGCACATTAGAAGACTGGAATATAGTTCCACCCAAATTCAAGGAACTGATTGTGACAGCTaGGAACACACTGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: IKCMHIRRLEYSSTQIQGTDCDS*EHTEEA
Trigger: TGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAGT...TCCTTGAATTTGGGTGGAACTATATTCCAGTCTTCTAATGTGCATGCATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATACTGATTGTGACAGCTaGGAACACACTGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: CWCFPFNILSRAGFIERYTDCDS*EHTEEA
Trigger: TGCCTCCTCAGTGTGTTCCAAGCTGTCACAATCAGT...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp TATTCTGGTGGCAGCACATTTATGACCTGGATGCTTTCCACTGGCCTTTATATGCTACTGAAGGACAAATaGAAAGACCACATACATAAG +
Preference number: 5 (lower is better)
Translates to: YSGGSTFMTWMLSTGLYMLLKDK*KDHIHK
Trigger: CTTATGTATGTGGTCTTTCAATTTGTCCTTCAGTAG...CATATAAAGGCCAGTGGAAAGCATCCAGGTCATAAATGTGCTGCCACCAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAACAAACAAGAAACATGTaGGCCAGGACTCCAAACCCA +
Preference number: 5 (lower is better)
Translates to: GMHTGMHYRINRVHINKKQTRNM*ARTPNP
Trigger: TGGGTTTGGAGTCCTGGCCAACATGTTTCTTGTTTG...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp TGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTACATATACTCCTCTGATGATATaGTTCATGGGTAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: WQSKNNSQYYFLASSCTYTPLMI*FMGKSE
Trigger: CTCACTCTTACCCATGAACAATATCATCAGAGGAGT...ATATGTACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTAGTGTAATTCTAATAGGTACTCCTCTGATGATATaGTTCATGGGTAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: DLLAFIVSGEKSSVILIGTPLMI*FMGKSE
Trigger: CTCACTCTTACCCATGAACAATATCATCAGAGGAGT...ACCTATTAGAATTACACTAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GATGAATGGCAGTCAAAGAACAACAGCCAATATTATTTCCTGGCCTCATCATGTCTACTGAAGGACAAATaGAAAGACCACATACATAAG +
Preference number: 5 (lower is better)
Translates to: DEWQSKNNSQYYFLASSCLLKDK*KDHIHK
Trigger: CTTATGTATGTGGTCTTTCAATTTGTCCTTCAGTAG...ACATGATGAGGCCAGGAAATAATATTGGCTGTTGTTCTTTGACTGCCATTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GCTTTAAGGGATTTTTGTGTTTTCTCTTTAAGGACGTCTACCTGTTTAGCAGTGCTACTGAAGGACAAATaGAAAGACCACATACATAAG +
Preference number: 5 (lower is better)
Translates to: ALRDFCVFSLRTSTCLAVLLKDK*KDHIHK
Trigger: CTTATGTATGTGGTCTTTCAATTTGTCCTTCAGTAG...CACTGCTAAACAGGTAGACGTCCTTAAAGAGAAAACACAAAAATCCCTTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAAACTCCTCTGATGATATaGTTCATGGGTAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: GMHTGMHYRINRVHINKKTPLMI*FMGKSE
Trigger: CTCACTCTTACCCATGAACAATATCATCAGAGGAGT...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAACTACTGAAGGACAAATaGAAAGACCACATACATAAG +
Preference number: 5 (lower is better)
Translates to: GMHTGMHYRINRVHINKKLLKDK*KDHIHK
Trigger: CTTATGTATGTGGTCTTTCAATTTGTCCTTCAGTAG...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp GGAATGCATACAGGCATGCACTATAGAATAAACCGTGTGCATATAAATAAGAAAATAGATGGTAGTGTTTaGACTGAAGGTTTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: GMHTGMHYRINRVHINKKIDGSV*TEGFSA
Trigger: TGCTGAAAAACCTTCAGTCAAAACACTACCATCTAT...TTTCTTATTTATATGCACACGGTTTATTCTATAGTGCATGCCTGTATGCATTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS-3UTR CAA 90 bp TGTTGGTGTTTTCCCTTTAATATCCTTTCAAGGGCTGGATTCATAGAAAGATATATAGATGGTAGTGTTTaGACTGAAGGTTTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: CWCFPFNILSRAGFIERYIDGSV*TEGFSA
Trigger: TGCTGAAAAACCTTCAGTCAAAACACTACCATCTAT...ATATCTTTCTATGAATCCAGCCCTTGAAAGGATATTAAAGGGAAAACACCAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS TCA 72 bp GATAGGCATTCATCACAAACTTCTGAAGAGTCAGGATaGCTGGATCATATCTCCATAAGAGGAATGAGGTGG +
Preference number: 6 (lower is better)
Translates to: DRHSSQTSEESG*LDHISIRGMRW
Trigger: CCACCTCATTCCTCTTATGGAGATATGATCCAGTCATCCTGACTCTTCAGAAGTTTGTGATGAATGCCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2
CDS CAA 72 bp GAAGTTGTCACTGTTAAAATAACTCCTCTGATGATATaGTTCATGGGTAAGAGTGAGCAGTATTTAGTAGCT +
Preference number: 6 (lower is better)
Translates to: EVVTVKITPLMI*FMGKSEQYLVA
Trigger: AGCTACTAAATACTGCTCACTCTTACCCATGAACAATATCATCAGAGGAGTTATTTTAACAGTGACAACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079669.7
ENSMUST00000226689.2
ENSMUST00000227131.2
ENSMUST00000227188.2
ENSMUST00000227631.2
ENSMUST00000227847.2
ENSMUST00000228285.2