RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R59 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000117744

Ensembl transcript IDs: ENSMUST00000074132.7

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TGGTGTGGGCTGCTCTGGTCTCAGCATGGCCTCTGTTGTTTTGATTaGCCTTATGTATGCGGTTCATTCTCTGGTGGTGTCTGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: WCGLLWSQHGLCCFD*PYVCGSFSGGVCLG
Trigger: ACCTAAACAGACACCACCAGAGAATGAACCGCATACATAAGGTCAATCAAAACAACAGAGGCCATGCTGAGACCAGAGCAGCCCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 90 bp AGGATGGTGTGGGCTGCTCTGGTCTCAGCATGGCCTCTGTTGTTTTaGTTGACCTTATGTATGCGGTTCATTCTCTGGTGGTGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: RMVWAALVSAWPLLF*LTLCMRFILWWCLF
Trigger: AAACAGACACCACCAGAGAATGAACCGCATACATAAGGTCAATCAAAACAACAGAGGCCATGCTGAGACCAGAGCAGCCCACACCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS CCA 90 bp ATGGAGACACTGGTCCAGGCCATGATGCCAAGGAATATGATGTCATaGGAAAACCGCAAGAAATGCATGTCTACATTGACCCCAGAGATG +
Preference number: 5 (lower is better)
Translates to: METLVQAMMPRNMMS*ENRKKCMSTLTPEM
Trigger: CATCTCTGGGGTCAATGTAGACATGCATTTCTTGCGGTTTTCCCATGACATCATATTCCTTGGCATCATGGCCTGGACCAGTGTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 90 bp TTGACCTTATGTATGCGGTTCATTCTCTGGTGGTGTCTGTTTAGGTaGATCATCATGGAGACACTGGTCCAGGCCATGATGCCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: LTLCMRFILWWCLFR*IIMETLVQAMMPRN
Trigger: ATTCCTTGGCATCATGGCCTGGACCAGTGTCTCCATGATGATTCACCTAAACAGACACCACCAGAGAATGAACCGCATACATAAGGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 90 bp CCAGTCACGTGGATTTCCAGTCCCACACTGAAGAGCAGAGAACAATaGCCCCTAGGATCCCTAAATATCAAAAGTAAGGGAGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: PVTWISSPTLKSREQ*PLGSLNIKSKGEMV
Trigger: CACCATTTCTCCCTTACTTTTGATATTTAGGGATCCTAGGGGTCATTGTTCTCTGCTCTTCAGTGTGGGACTGGAAATCCACGTGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS GCA 90 bp AGTCAGTCAAGACTGGAGAGAAATTATGGACAAACAGAAGGATGTTaGCCACAGTCCCAACCACAACCTGGCAAAGCAAAAGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: SQSRLERNYGQTEGC*PQSQPQPGKAKGSE
Trigger: TTCAGATCCTTTTGCTTTGCCAGGTTGTGGTTGGGACTGTGGGCAACATCCTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 90 bp GAGGTCAGTTGGAGGCTTCCTTGGAACAAAATCAATCATGTCATGTaGATATGTCAAGAGAAGGAGCATGAATGCATTGGCCACAGCCAA +
Preference number: 5 (lower is better)
Translates to: EVSWRLPWNKINHVM*ICQEKEHECIGHSQ
Trigger: TTGGCTGTGGCCAATGCATTCATGCTCCTTCTCTTGACATATTCACATGACATGATTGATTTTGTTCCAAGGAAGCCTCCAACTGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS GCA 90 bp GGTGGAACACATGATTGTGCCTTGAGCCACCATGTGAAAGAAGTATaGAAGTTTACATTTGAGGTCAGTTGGAGGCTTCCTTGGAACAAA +
Preference number: 5 (lower is better)
Translates to: GGTHDCALSHHVKEV*KFTFEVSWRLPWNK
Trigger: TTTGTTCCAAGGAAGCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCAAGGCACAATCATGTGTTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 90 bp CCGCAAGAAATGCATGTCTACATTGACCCCAGAGATGGAGCATATTaGATTGCCTTTAGAATCAGAGTCATTGTGTGTTTTCTGTGGACC +
Preference number: 5 (lower is better)
Translates to: PQEMHVYIDPRDGAY*IAFRIRVIVCFLWT
Trigger: GGTCCACAGAAAACACACAATGACTCTGATTCTAAAGGCAATTCAATATGCTCCATCTCTGGGGTCAATGTAGACATGCATTTCTTGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 90 bp AAAGTAAGGGAGAAATGGTGGGAAAGCTTAGAGCTAGAACTTTTATaGCATGCCTCGACCAGAGACGAGATTCCACAAAGGAAATGTGAA +
Preference number: 5 (lower is better)
Translates to: KVREKWWESLELELL*HASTRDEIPQRKCE
Trigger: TTCACATTTCCTTTGTGGAATCTCGTCTCTGGTCGAGGCATGTCATAAAAGTTCTAGCTCTAAGCTTTCCCACCATTTCTCCCTTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 90 bp TTGTGCCTTGAGCCACCATGTGAAAGAAGTATGCAAGTTTACATTTaGGGTCAGTTGGAGGCTTCCTTGGAACAAAATCAATCATGTCAT +
Preference number: 5 (lower is better)
Translates to: LCLEPPCERSMQVYI*GQLEASLEQNQSCH
Trigger: ATGACATGATTGATTTTGTTCCAAGGAAGCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCAAGGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS GCA 72 bp CACAAATGTGACCACCAGCATCAGGATGGTGTGGGCTaGTCTGGTCTCAGCATGGCCTCTGTTGTTTTGATT +
Preference number: 6 (lower is better)
Translates to: HKCDHQHQDGVG*SGLSMASVVLI
Trigger: AATCAAAACAACAGAGGCCATGCTGAGACCAGAGCAGCCCACACCATCCTGATGCTGGTGGTCACATTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS CAA 90 bp CAGGATGGTGTGGGCTGCTCTGGTCTCAGCATGGCCTCTGTTGTTTaGATTGACCTTATGTATGCGGTTCATTCTCTGGTGGTGTCTGTT +
Preference number: 6 (lower is better)
Translates to: QDGVGCSGLSMASVV*IDLMYAVHSLVVSV
Trigger: AACAGACACCACCAGAGAATGAACCGCATACATAAGGTCAATCAAAACAACAGAGGCCATGCTGAGACCAGAGCAGCCCACACCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 72 bp TGGGCTGCTCTGGTCTCAGCATGGCCTCTGTTGTTTTaGTTGACCTTATGTATGCGGTTCATTCTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: WAALVSAWPLLF*LTLCMRFILWW
Trigger: CCACCAGAGAATGAACCGCATACATAAGGTCAATCAAAACAACAGAGGCCATGCTGAGACCAGAGCAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS CAA 72 bp GTGGGCTGCTCTGGTCTCAGCATGGCCTCTGTTGTTTaGATTGACCTTATGTATGCGGTTCATTCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: VGCSGLSMASVV*IDLMYAVHSLV
Trigger: CACCAGAGAATGAACCGCATACATAAGGTCAATCAAAACAACAGAGGCCATGCTGAGACCAGAGCAGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 72 bp TGTATGCGGTTCATTCTCTGGTGGTGTCTGTTTAGGTaGATCATCATGGAGACACTGGTCCAGGCCATGATG +
Preference number: 6 (lower is better)
Translates to: CMRFILWWCLFR*IIMETLVQAMM
Trigger: CATCATGGCCTGGACCAGTGTCTCCATGATGATTCACCTAAACAGACACCACCAGAGAATGAACCGCATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 72 bp CTGCTCTGGTCTCAGCATGGCCTCTGTTGTTTTGATTaGCCTTATGTATGCGGTTCATTCTCTGGTGGTGTC +
Preference number: 6 (lower is better)
Translates to: LLWSQHGLCCFD*PYVCGSFSGGV
Trigger: GACACCACCAGAGAATGAACCGCATACATAAGGTCAATCAAAACAACAGAGGCCATGCTGAGACCAGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS CCA 72 bp CTGGTCCAGGCCATGATGCCAAGGAATATGATGTCATaGGAAAACCGCAAGAAATGCATGTCTACATTGACC +
Preference number: 6 (lower is better)
Translates to: LVQAMMPRNMMS*ENRKKCMSTLT
Trigger: GGTCAATGTAGACATGCATTTCTTGCGGTTTTCCCATGACATCATATTCCTTGGCATCATGGCCTGGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS CAA 90 bp AAACTGGTAGGTGCTGAGGACACAGGTGGAACACATGATTGTGCCTaGAGCCACCATGTGAAAGAAGTATGCAAGTTTACATTTGAGGTC +
Preference number: 6 (lower is better)
Translates to: KLVGAEDTGGTHDCA*SHHVKEVCKFTFEV
Trigger: GACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCAAGGCACAATCATGTGTTCCACCTGTGTCCTCAGCACCTACCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS GCA 72 bp AGACTGGAGAGAAATTATGGACAAACAGAAGGATGTTaGCCACAGTCCCAACCACAACCTGGCAAAGCAAAA +
Preference number: 6 (lower is better)
Translates to: RLERNYGQTEGC*PQSQPQPGKAK
Trigger: TTTTGCTTTGCCAGGTTGTGGTTGGGACTGTGGGCAACATCCTTCTGTTTGTCCATAATTTCTCTCCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS CAA 72 bp AAGACTGGAGAGAAATTATGGACAAACAGAAGGATGTaGCCCACAGTCCCAACCACAACCTGGCAAAGCAAA +
Preference number: 6 (lower is better)
Translates to: KTGEKLWTNRRM*PTVPTTTWQSK
Trigger: TTTGCTTTGCCAGGTTGTGGTTGGGACTGTGGGCAACATCCTTCTGTTTGTCCATAATTTCTCTCCAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 72 bp TGGATTTCCAGTCCCACACTGAAGAGCAGAGAACAATaGCCCCTAGGATCCCTAAATATCAAAAGTAAGGGA +
Preference number: 6 (lower is better)
Translates to: WISSPTLKSREQ*PLGSLNIKSKG
Trigger: TCCCTTACTTTTGATATTTAGGGATCCTAGGGGTCATTGTTCTCTGCTCTTCAGTGTGGGACTGGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS GCA 72 bp CATGATTGTGCCTTGAGCCACCATGTGAAAGAAGTATaGAAGTTTACATTTGAGGTCAGTTGGAGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: HDCALSHHVKEV*KFTFEVSWRLP
Trigger: AGGAAGCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCAAGGCACAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS GCA 72 bp CCAAGGAATATGATGTCATGGGAAAACCGCAAGAAATaGATGTCTACATTGACCCCAGAGATGGAGCATATT +
Preference number: 6 (lower is better)
Translates to: PRNMMSWENRKK*MSTLTPEMEHI
Trigger: AATATGCTCCATCTCTGGGGTCAATGTAGACATGCATTTCTTGCGGTTTTCCCATGACATCATATTCCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 72 bp TGGAGGCTTCCTTGGAACAAAATCAATCATGTCATGTaGATATGTCAAGAGAAGGAGCATGAATGCATTGGC +
Preference number: 6 (lower is better)
Translates to: WRLPWNKINHVM*ICQEKEHECIG
Trigger: GCCAATGCATTCATGCTCCTTCTCTTGACATATTCACATGACATGATTGATTTTGTTCCAAGGAAGCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS CAA 90 bp AAGAAATGCATGTCTACATTGACCCCAGAGATGGAGCATATTGAATaGCCTTTAGAATCAGAGTCATTGTGTGTTTTCTGTGGACCACTG +
Preference number: 6 (lower is better)
Translates to: KKCMSTLTPEMEHIE*PLESESLCVFCGPL
Trigger: CAGTGGTCCACAGAAAACACACAATGACTCTGATTCTAAAGGCAATTCAATATGCTCCATCTCTGGGGTCAATGTAGACATGCATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7
CDS TCA 72 bp ATGCATGTCTACATTGACCCCAGAGATGGAGCATATTaGATTGCCTTTAGAATCAGAGTCATTGTGTGTTTT +
Preference number: 6 (lower is better)
Translates to: MHVYIDPRDGAY*IAFRIRVIVCF
Trigger: AAAACACACAATGACTCTGATTCTAAAGGCAATTCAATATGCTCCATCTCTGGGGTCAATGTAGACATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074132.7