Pregenerated sensors for VMN1R57 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091652Ensembl transcript IDs: ENSMUST00000170780.2, ENSMUST00000227798.2, ENSMUST00000228062.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTaGGTAGATGCAGTCCTAGATCAAGGCAGAATCAGTCCTACTCCT | + |
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Preference number: 1 (lower is better) Translates to: RLHDYLRVAEMGLCV*VDAVLDQGRISPTP Trigger: AGGAGTAGGACTGATTCTGCCTTGATCTAGGACTGCATCTACCCACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTAGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTGGGTTGCTGGTGTCACGGTaGGATTTTTCAAGTTATGGA | + |
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Preference number: 2 (lower is better) Translates to: PLGYMTISGWQRWGSVCGLLVSR*DFSSYG Trigger: TCCATAACTTGAAAAATCTCACCGTGACACCAGCAA...CCCACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCTAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGTCAAGTTGACAACCAGGAATAGCCACTACAAGTGTACATCATTGGCAGTGGTTTACCCTGCATCCTaGCCACTAGGCTACATGACT | + |
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Preference number: 2 (lower is better) Translates to: IVKLTTRNSHYKCTSLAVVYPAS*PLGYMT Trigger: AGTCATGTAGCCTAGTGGCCAGGATGCAGGGTAAAC...CACTGCCAATGATGTACACTTGTAGTGGCTATTCCTGGTTGTCAACTTGACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR GCA 72 bp | CAGGGTGGCAGAGATGGGGCTCTGTGTGTGGGTAGATaGAGTCCTAGATCAAGGCAGAATCAGTCCTACTCC | + |
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Preference number: 3 (lower is better) Translates to: QGGRDGALCVGR*SPRSRQNQSYS Trigger: GGAGTAGGACTGATTCTGCCTTGATCTAGGACTGCATCTACCCACACACAGAGCCCCATCTCTGCCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR TCA 72 bp | GGCAGTGGTCCAGTTGCTGGGACTGCTTCATTTGCATaGTTGGGAATTCCTGGTTCTAGCTGGACATGTTCT | + |
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Preference number: 3 (lower is better) Translates to: GSGPVAGTASFA*LGIPGSSWTCS Trigger: AGAACATGTCCAGCTAGAACCAGGAATTCCCAATCATGCAAATGAAGCAGTCCCAGCAACTGGACCACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR GCA 72 bp | GCAGTCCTAGATCAAGGCAGAATCAGTCCTACTCCTTaGTGGTGTCACGGTGAGATTTTTCAAGTTATGGAC | + |
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Preference number: 3 (lower is better) Translates to: AVLDQGRISPTP*WCHGEIFQVMD Trigger: GTCCATAACTTGAAAAATCTCACCGTGACACCAGCAAGGAGTAGGACTGATTCTGCCTTGATCTAGGACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR CCA 72 bp | ACTACAAGTGTACATCATTGGCAGTGGTCCAGTTGCTaGGACTGCTTCATTTGCATGATTGGGAATTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: TTSVHHWQWSSC*DCFICMIGNSW Trigger: CCAGGAATTCCCAATCATGCAAATGAAGCAGTCCCAGCAACTGGACCACTGCCAATGATGTACACTTGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR CCA 72 bp | CCAGGAATAGCCACTACAAGTGTACATCATTGGCAGTaGTCCAGTTGCTGGGACTGCTTCATTTGCATGATT | + |
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Preference number: 3 (lower is better) Translates to: PGIATTSVHHWQ*SSCWDCFICMI Trigger: AATCATGCAAATGAAGCAGTCCCAGCAACTGGACCACTGCCAATGATGTACACTTGTAGTGGCTATTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR CCA 72 bp | GTCCTAGATCAAGGCAGAATCAGTCCTACTCCTTGCTaGTGTCACGGTGAGATTTTTCAAGTTATGGACATG | + |
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Preference number: 3 (lower is better) Translates to: VLDQGRISPTPC*CHGEIFQVMDM Trigger: CATGTCCATAACTTGAAAAATCTCACCGTGACACCAGCAAGGAGTAGGACTGATTCTGCCTTGATCTAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR CCA 72 bp | GTGGTCCAGTTGCTGGGACTGCTTCATTTGCATGATTaGGAATTCCTGGTTCTAGCTGGACATGTTCTTATA | + |
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Preference number: 3 (lower is better) Translates to: VVQLLGLLHLHD*EFLVLAGHVLI Trigger: TATAAGAACATGTCCAGCTAGAACCAGGAATTCCCAATCATGCAAATGAAGCAGTCCCAGCAACTGGACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGTCAAGTTGACAACCAGGAATAGCCACTACAAGTGTACATCATTGGCAGTGCTGGGACTGCTTCATTaGCATGATTGGGAATTCCTG | + |
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Preference number: 3 (lower is better) Translates to: IVKLTTRNSHYKCTSLAVLGLLH*HDWEFL Trigger: CAGGAATTCCCAATCATGCAAATGAAGCAGTCCCAG...CACTGCCAATGATGTACACTTGTAGTGGCTATTCCTGGTTGTCAACTTGACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | GTGGCAGAGATGGGGCTCTGTGTGTGGGTAGATGCAGTCCTAGATCAAGGCAGACAAACTGGTAGGTGCTaGGGACACAGGTGGAACACA | + |
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Preference number: 4 (lower is better) Translates to: VAEMGLCVWVDAVLDQGRQTGRC*GHRWNT Trigger: TGTGTTCCACCTGTGTCCTCAGCACCTACCAGTTTG...TCTGCCTTGATCTAGGACTGCATCTACCCACACACAGAGCCCCATCTCTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | TGGCCACTAGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTCAAACTGGTAGGTGCTaGGGACACAGGTGGAACACA | + |
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Preference number: 4 (lower is better) Translates to: WPLGYMTISGWQRWGSVCQTGRC*GHRWNT Trigger: TGTGTTCCACCTGTGTCCTCAGCACCTACCAGTTTG...ACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCTAGTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | CCACTAGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTGGGTTTCCAGGCCCACACTaGAGAGCAGAGAACAATGAC | + |
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Preference number: 4 (lower is better) Translates to: PLGYMTISGWQRWGSVCGFPGPH*RAENND Trigger: GTCATTGTTCTCTGCTCTTCAGTGTGGGCCTGGAAA...CCCACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCTAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | CCACTAGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTGGGTTAGGTGAATCACCATaGAGACACTGGTCCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PLGYMTISGWQRWGSVCGLGESP*RHWSKP Trigger: TGGCTTGGACCAGTGTCTCCATGGTGATTCACCTAA...CCCACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCTAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | TGGCCACTAGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTCCTCGAGCCACCATGTaGAAGAAGTATGCAAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: WPLGYMTISGWQRWGSVCPRATM*KKYASL Trigger: TAAACTTGCATACTTCTTTCACATGGTGGCTCGAGG...ACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCTAGTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | GATGCAGTCCTAGATCAAGGCAGAATCAGTCCTACTCCTTGCTGGTGTCACGGTTTTCCAGGCCCACACTaGAGAGCAGAGAACAATGAC | + |
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Preference number: 4 (lower is better) Translates to: DAVLDQGRISPTPCWCHGFPGPH*RAENND Trigger: GTCATTGTTCTCTGCTCTTCAGTGTGGGCCTGGAAA...ACCGTGACACCAGCAAGGAGTAGGACTGATTCTGCCTTGATCTAGGACTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGTGTGTGGGTAGATGCAGTCCTAGATCAAGGCAGAATCAGTCCTACTCCGTATGGGCCTCAGTCTaGAGTCAGTCAAGTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: ALCVGRCSPRSRQNQSYSVWASV*SQSSLE Trigger: CTCCAAACTTGACTGACTCCAGACTGAGGCCCATAC...GGAGTAGGACTGATTCTGCCTTGATCTAGGACTGCATCTACCCACACACAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | CTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTGGGTAGATGCATTAGGTGAATCACCATaGAGACACTGGTCCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LHDYLRVAEMGLCVWVDALGESP*RHWSKP Trigger: TGGCTTGGACCAGTGTCTCCATGGTGATTCACCTAA...TGCATCTACCCACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | GTGGCAGAGATGGGGCTCTGTGTGTGGGTAGATGCAGTCCTAGATCAAGGCAGATGGCCTCTGTTGTTTTaGTTGACCTTATGTATGTGG | + |
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Preference number: 4 (lower is better) Translates to: VAEMGLCVWVDAVLDQGRWPLLF*LTLCMW Trigger: CCACATACATAAGGTCAATCAAAACAACAGAGGCCA...TCTGCCTTGATCTAGGACTGCATCTACCCACACACAGAGCCCCATCTCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | CCACTAGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTGGGCTCTGTTGTTTTGATTaGCCTTATGTATGTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PLGYMTISGWQRWGSVCGLCCFD*PYVCGS Trigger: TGAACCACATACATAAGGTCAATCAAAACAACAGAG...CCCACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCTAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR CAA 72 bp | TCATTGGCAGTGGTCCAGTTGCTGGGACTGCTTCATTaGCATGATTGGGAATTCCTGGTTCTAGCTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: SLAVVQLLGLLH*HDWEFLVLAGH Trigger: ATGTCCAGCTAGAACCAGGAATTCCCAATCATGCAAATGAAGCAGTCCCAGCAACTGGACCACTGCCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR GCA 90 bp | CCACTAGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTGGGCATGTGAAAGAAGTATaGAAGTTTACATTTGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PLGYMTISGWQRWGSVCGHVKEV*KFTFEV Trigger: GACCTCAAATGTAAACTTGCATACTTCTTTCACATG...CCCACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCTAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGTGTGTGGGTAGATGCAGTCCTAGATCAAGGCAGAATCAGTCCTACTCCGTCCCAACCACAACATaGCAAAGCAAAAGGATGTTA | + |
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Preference number: 4 (lower is better) Translates to: ALCVGRCSPRSRQNQSYSVPTTT*QSKRML Trigger: TAACATCCTTTTGCTTTGCCATGTTGTGGTTGGGAC...GGAGTAGGACTGATTCTGCCTTGATCTAGGACTGCATCTACCCACACACAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | CTCTGTGTGTGGGTAGATGCAGTCCTAGATCAAGGCAGAATCAGTCCTACTCCTTGGCCTCTGTTGTTTTaGTTGACCTTATGTATGTGG | + |
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Preference number: 4 (lower is better) Translates to: LCVWVDAVLDQGRISPTPWPLLF*LTLCMW Trigger: CCACATACATAAGGTCAATCAAAACAACAGAGGCCA...AGGAGTAGGACTGATTCTGCCTTGATCTAGGACTGCATCTACCCACACACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | TGTTCTTATAAGGAGATAGGAAGTTTACCCTGCATCCTGGCCACTAGGCTACATGTATGGGCCTCAGTCTaGAGTCAGTCAAGTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CSYKEIGSLPCILATRLHVWASV*SQSSLE Trigger: CTCCAAACTTGACTGACTCCAGACTGAGGCCCATAC...ATGTAGCCTAGTGGCCAGGATGCAGGGTAAACTTCCTATCTCCTTATAAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | CTCTGTGTGTGGGTAGATGCAGTCCTAGATCAAGGCAGAATCAGTCCTACTCCTACATTTGAGGTCAGTTaGAGGCTTCCTTGGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: LCVWVDAVLDQGRISPTPTFEVS*RLPWNK Trigger: TTTGTTCCAAGGAAGCCTCCAACTGACCTCAAATGT...AGGAGTAGGACTGATTCTGCCTTGATCTAGGACTGCATCTACCCACACACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR CAA 72 bp | AGCCACTACAAGTGTACATCATTGGCAGTGGTCCAGTaGCTGGGACTGCTTCATTTGCATGATTGGGAATTC | + |
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Preference number: 4 (lower is better) Translates to: SHYKCTSLAVVQ*LGLLHLHDWEF Trigger: GAATTCCCAATCATGCAAATGAAGCAGTCCCAGCAACTGGACCACTGCCAATGATGTACACTTGTAGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| 3UTR CAA 72 bp | TTGACAACCAGGAATAGCCACTACAAGTGTACATCATaGGCAGTGGTCCAGTTGCTGGGACTGCTTCATTTG | + |
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Preference number: 4 (lower is better) Translates to: LTTRNSHYKCTS*AVVQLLGLLHL Trigger: CAAATGAAGCAGTCCCAGCAACTGGACCACTGCCAATGATGTACACTTGTAGTGGCTATTCCTGGTTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | GCAGAATCAGTCCTACTCCTTGCTGGTGTCACGGTGAGATTTTTCAAGTTATGGAATTCATGTCTACACTaGCCCCAGAGATGGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: AESVLLLAGVTVRFFKLWNSCLH*PQRWSI Trigger: TATGCTCCATCTCTGGGGTCAGTGTAGACATGAATT...CCATAACTTGAAAAATCTCACCGTGACACCAGCAAGGAGTAGGACTGATTCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | CATCATTGGCAGTGGTCCAGTTGCTGGGACTGCTTCATTTGCATGATTGGGAATGTCCCAACCACAACATaGCAAAGCAAAAGGATGTTA | + |
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Preference number: 4 (lower is better) Translates to: HHWQWSSCWDCFICMIGNVPTTT*QSKRML Trigger: TAACATCCTTTTGCTTTGCCATGTTGTGGTTGGGAC...ATTCCCAATCATGCAAATGAAGCAGTCCCAGCAACTGGACCACTGCCAATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | CATCATTGGCAGTGGTCCAGTTGCTGGGACTGCTTCATTTGCATGATTGGGAATGGAGTCAGTCAAGTTTaGAGAGAAGTTATGGACAAA | + |
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Preference number: 4 (lower is better) Translates to: HHWQWSSCWDCFICMIGNGVSQV*REVMDK Trigger: TTTGTCCATAACTTCTCTCCAAACTTGACTGACTCC...ATTCCCAATCATGCAAATGAAGCAGTCCCAGCAACTGGACCACTGCCAATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | AAGTTGACAACCAGGAATAGCCACTACAAGTGTACATCATTGGCAGTGGTCCAGACATTTGAGGTCAGTTaGAGGCTTCCTTGGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: KLTTRNSHYKCTSLAVVQTFEVS*RLPWNK Trigger: TTTGTTCCAAGGAAGCCTCCAACTGACCTCAAATGT...CTGGACCACTGCCAATGATGTACACTTGTAGTGGCTATTCCTGGTTGTCAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | CTACTCCTTGCTGGTGTCACGGTGAGATTTTTCAAGTTATGGACATGTTTTGACCCTCGAGCCACCATGTaGAAGAAGTATGCAAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: LLLAGVTVRFFKLWTCFDPRATM*KKYASL Trigger: TAAACTTGCATACTTCTTTCACATGGTGGCTCGAGG...GTCAAAACATGTCCATAACTTGAAAAATCTCACCGTGACACCAGCAAGGAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR TCA 90 bp | GGCAGAATCAGTCCTACTCCTTGCTGGTGTCACGGTGAGATTTTTCAAGTTATGCTCTGTTGTTTTGATTaGCCTTATGTATGTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GRISPTPCWCHGEIFQVMLCCFD*PYVCGS Trigger: TGAACCACATACATAAGGTCAATCAAAACAACAGAG...CATAACTTGAAAAATCTCACCGTGACACCAGCAAGGAGTAGGACTGATTCTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | AAGTTGACAACCAGGAATAGCCACTACAAGTGTACATCATTGGCAGTGGTCCAGTTTGGAGAGAAGTTATaGACAAACAGAAGGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: KLTTRNSHYKCTSLAVVQFGEKL*TNRRML Trigger: CAACATCCTTCTGTTTGTCCATAACTTCTCTCCAAA...CTGGACCACTGCCAATGATGTACACTTGTAGTGGCTATTCCTGGTTGTCAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | CTACTCCTTGCTGGTGTCACGGTGAGATTTTTCAAGTTATGGACATGTTTTGACAGTTGGAGGCTTCCTTaGAACAAAATCAATCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LLLAGVTVRFFKLWTCFDSWRLP*NKINQV Trigger: GACCTGATTGATTTTGTTCCAAGGAAGCCTCCAACT...GTCAAAACATGTCCATAACTTGAAAAATCTCACCGTGACACCAGCAAGGAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | ATTGTCAAGTTGACAACCAGGAATAGCCACTACAAGTGTACATCATTGGCAGTGAGTTGGAGGCTTCCTTaGAACAAAATCAATCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: IVKLTTRNSHYKCTSLAVSWRLP*NKINQV Trigger: GACCTGATTGATTTTGTTCCAAGGAAGCCTCCAACT...CACTGCCAATGATGTACACTTGTAGTGGCTATTCCTGGTTGTCAACTTGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CCA 90 bp | ATCAGTCCTACTCCTTGCTGGTGTCACGGTGAGATTTTTCAAGTTATGGACATGTTTGGAGAGAAGTTATaGACAAACAGAAGGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: ISPTPCWCHGEIFQVMDMFGEKL*TNRRML Trigger: CAACATCCTTCTGTTTGTCCATAACTTCTCTCCAAA...CATGTCCATAACTTGAAAAATCTCACCGTGACACCAGCAAGGAGTAGGACTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR GCA 90 bp | TGTTCTTATAAGGAGATAGGAAGTTTACCCTGCATCCTGGCCACTAGGCTACATCATGTGAAAGAAGTATaGAAGTTTACATTTGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: CSYKEIGSLPCILATRLHHVKEV*KFTFEV Trigger: GACCTCAAATGTAAACTTGCATACTTCTTTCACATG...ATGTAGCCTAGTGGCCAGGATGCAGGGTAAACTTCCTATCTCCTTATAAGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CAA 90 bp | CCACTAGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTGGGCAGTTGGAGGCTTCCTaGGAACAAAATCAATCAGGT | + |
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Preference number: 5 (lower is better) Translates to: PLGYMTISGWQRWGSVCGQLEAS*EQNQSG Trigger: ACCTGATTGATTTTGTTCCAAGGAAGCCTCCAACTG...CCCACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCTAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS-3UTR CAA 90 bp | TGGCCACTAGGCTACATGACTATCTCAGGGTGGCAGAGATGGGGCTCTGTGTGTCAGTTGGAGGCTTCCTaGGAACAAAATCAATCAGGT | + |
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Preference number: 5 (lower is better) Translates to: WPLGYMTISGWQRWGSVCQLEAS*EQNQSG Trigger: ACCTGATTGATTTTGTTCCAAGGAAGCCTCCAACTG...ACACACAGAGCCCCATCTCTGCCACCCTGAGATAGTCATGTAGCCTAGTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS TCA 90 bp | CCAGTCACGTGGATTTCCAGGCCCACACTGAAGAGCAGAGAACAATaGCCCCTAGGTTCCCTAAATATCAACAGTAAGGGAGAAATGGTG | + |
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Preference number: 5 (lower is better) Translates to: PVTWISRPTLKSREQ*PLGSLNINSKGEMV Trigger: CACCATTTCTCCCTTACTGTTGATATTTAGGGAACCTAGGGGTCATTGTTCTCTGCTCTTCAGTGTGGGCCTGGAAATCCACGTGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS GCA 90 bp | GGTGGAACACATGATTGTGCCTCGAGCCACCATGTGAAAGAAGTATaGAAGTTTACATTTGAGGTCAGTTGGAGGCTTCCTTGGAACAAA | + |
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Preference number: 5 (lower is better) Translates to: GGTHDCASSHHVKEV*KFTFEVSWRLPWNK Trigger: TTTGTTCCAAGGAAGCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAGGCACAATCATGTGTTCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS TCA 90 bp | TTGTGCCTCGAGCCACCATGTGAAAGAAGTATGCAAGTTTACATTTaGGGTCAGTTGGAGGCTTCCTTGGAACAAAATCAATCAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LCLEPPCERSMQVYI*GQLEASLEQNQSGH Trigger: ATGACCTGATTGATTTTGTTCCAAGGAAGCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAGGCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS CCA 72 bp | AAGCTCACAAATGTGACCACCAGCATCAGGATGGTGTaGGCTGCTCTGGTCTCAGCATGGCCTCTGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KLTNVTTSIRMV*AALVSAWPLLF Trigger: AAACAACAGAGGCCATGCTGAGACCAGAGCAGCCCACACCATCCTGATGCTGGTGGTCACATTTGTGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS CCA 72 bp | GACCTGTATGGGCCTCAGTCTGGAGTCAGTCAAGTTTaGAGAGAAGTTATGGACAAACAGAAGGATGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: DLYGPQSGVSQV*REVMDKQKDVA Trigger: GGCAACATCCTTCTGTTTGTCCATAACTTCTCTCCAAACTTGACTGACTCCAGACTGAGGCCCATACAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS CAA 90 bp | CAGGATGGTGTGGGCTGCTCTGGTCTCAGCATGGCCTCTGTTGTTTaGATTGACCTTATGTATGTGGTTCATTCTCTGGTGATGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QDGVGCSGLSMASVV*IDLMYVVHSLVMSV Trigger: AACAGACATCACCAGAGAATGAACCACATACATAAGGTCAATCAAAACAACAGAGGCCATGCTGAGACCAGAGCAGCCCACACCATCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS TCA 72 bp | TGGATTTCCAGGCCCACACTGAAGAGCAGAGAACAATaGCCCCTAGGTTCCCTAAATATCAACAGTAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: WISRPTLKSREQ*PLGSLNINSKG Trigger: TCCCTTACTGTTGATATTTAGGGAACCTAGGGGTCATTGTTCTCTGCTCTTCAGTGTGGGCCTGGAAATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS TCA 72 bp | CTGCTCTGGTCTCAGCATGGCCTCTGTTGTTTTGATTaGCCTTATGTATGTGGTTCATTCTCTGGTGATGTC | + |
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Preference number: 6 (lower is better) Translates to: LLWSQHGLCCFD*PYVCGSFSGDV Trigger: GACATCACCAGAGAATGAACCACATACATAAGGTCAATCAAAACAACAGAGGCCATGCTGAGACCAGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS GCA 72 bp | CATGATTGTGCCTCGAGCCACCATGTGAAAGAAGTATaGAAGTTTACATTTGAGGTCAGTTGGAGGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: HDCASSHHVKEV*KFTFEVSWRLP Trigger: AGGAAGCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAGGCACAATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS TCA 72 bp | CAGGTGGAACACATGATTGTGCCTCGAGCCACCATGTaGAAGAAGTATGCAAGTTTACATTTGAGGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: QVEHMIVPRATM*KKYASLHLRSV Trigger: AACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAGGCACAATCATGTGTTCCACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS GCA 72 bp | AGTTTGGAGAGAAGTTATGGACAAACAGAAGGATGTTaGCCACAGTCCCAACCACAACATGGCAAAGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SLERSYGQTEGC*PQSQPQHGKAK Trigger: TTTTGCTTTGCCATGTTGTGGTTGGGACTGTGGGCAACATCCTTCTGTTTGTCCATAACTTCTCTCCAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS CCA 72 bp | CTGGTCCAAGCCATAATGCCAAGGAATATGATGTCATaGGAAAACCGCAAGAAATTCATGTCTACACTGACC | + |
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Preference number: 6 (lower is better) Translates to: LVQAIMPRNMMS*ENRKKFMSTLT Trigger: GGTCAGTGTAGACATGAATTTCTTGCGGTTTTCCCATGACATCATATTCCTTGGCATTATGGCTTGGACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS CAA 72 bp | AAGTTTGGAGAGAAGTTATGGACAAACAGAAGGATGTaGCCCACAGTCCCAACCACAACATGGCAAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: KFGEKLWTNRRM*PTVPTTTWQSK Trigger: TTTGCTTTGCCATGTTGTGGTTGGGACTGTGGGCAACATCCTTCTGTTTGTCCATAACTTCTCTCCAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS TCA 72 bp | GAGCCACCATGTGAAAGAAGTATGCAAGTTTACATTTaGGGTCAGTTGGAGGCTTCCTTGGAACAAAATCAA | + |
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Preference number: 6 (lower is better) Translates to: EPPCERSMQVYI*GQLEASLEQNQ Trigger: TTGATTTTGTTCCAAGGAAGCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS CAA 72 bp | ATGGAGCATATCCAATTGTCTTTAGAATCAGAGTCATaGTGTGATTTCTGTGGACCACTGACATTCATTGGG | + |
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Preference number: 6 (lower is better) Translates to: MEHIQLSLESES*CDFCGPLTFIG Trigger: CCCAATGAATGTCAGTGGTCCACAGAAATCACACAATGACTCTGATTCTAAAGACAATTGGATATGCTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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| CDS CAA 72 bp | ATGTCTACACTGACCCCAGAGATGGAGCATATCCAATaGTCTTTAGAATCAGAGTCATTGTGTGATTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: MSTLTPEMEHIQ*SLESESLCDFC Trigger: ACAGAAATCACACAATGACTCTGATTCTAAAGACAATTGGATATGCTCCATCTCTGGGGTCAGTGTAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170780.2 ENSMUST00000227798.2 ENSMUST00000228062.2 |
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