Pregenerated sensors for VMN1R56 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091874Ensembl transcript IDs: ENSMUST00000169556.3
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTTCAGCCAGTGTTGAGTCCAGGAGAAACAGCCTTCTTTCAAGATaGTTTTCAGTGAAACAGACATCTTTATTTGGGGTGGCATGGTCT | + |
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Preference number: 1 (lower is better) Translates to: ISASVESRRNSLLSR*FSVKQTSLFGVAWS Trigger: AGACCATGCCACCCCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAAAGAAGGCTGTTTCTCCTGGACTCAACACTGGCTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTGGGGTGGCATGGTCTATGCTTACCCTGCACGCTaGCCACTAGGCTACATGACT | + |
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Preference number: 2 (lower is better) Translates to: FKMVFSETDIFIWGGMVYAYPAR*PLGYMT Trigger: AGTCATGTAGCCTAGTGGCCAGCGTGCAGGGTAAGC...ATAGACCATGCCACCCCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| 3UTR-3UTR CCA 90 bp | GAGAAACAGCCTTCTTTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTGGGCACATCATAGACAGTaGTCAAGTTGCAGGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: EKQPSFKMVFSETDIFIWAHHRQ*SSCRDC Trigger: GCAGTCCCTGCAACTTGACCACTGTCTATGATGTGC...CCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAAAGAAGGCTGTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| 3UTR-3UTR TCA 90 bp | GAGAAACAGCCTTCTTTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTGGCTGCTGGTGTCAGGGTaGGATTTTTCAAGTTATGTA | + |
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Preference number: 2 (lower is better) Translates to: EKQPSFKMVFSETDIFIWLLVSG*DFSSYV Trigger: TACATAACTTGAAAAATCTCACCCTGACACCAGCAG...CCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAAAGAAGGCTGTTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAAAGCAATAACACTAAAATCAGGGAAGACAGGCTGTCCACTCTTTTCCTTTTCAAGTTGCAGGGACTaGTTCAATTGTATGATTAGG | + |
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Preference number: 2 (lower is better) Translates to: MKAITLKSGKTGCPLFSFSSCRD*FNCMIR Trigger: CCTAATCATACAATTGAAGCAGTCCCTGCAACTTGA...AAAGGAAAAGAGTGGACAGCCTGTCTTCCCTGATTTTAGTGTTATTGCTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| 3UTR GCA 72 bp | TGGACATGTTCTTATAAGGAGATAGGAAGCTTACCCTaGACGCTGGCCACTAGGCTACATGACTACCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: WTCSYKEIGSLP*TLATRLHDYLR Trigger: CCTGAGGTAGTCATGTAGCCTAGTGGCCAGCGTGCAGGGTAAGCTTCCTATCTCCTTATAAGAACATGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| 3UTR TCA 72 bp | GACAGTGGTCAAGTTGCAGGGACTGCTTCAATTGTATaGTTAGGAATTCCTGGTTCTAGCTGGACATGTTCT | + |
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Preference number: 3 (lower is better) Translates to: DSGQVAGTASIV*LGIPGSSWTCS Trigger: AGAACATGTCCAGCTAGAACCAGGAATTCCTAATCATACAATTGAAGCAGTCCCTGCAACTTGACCACTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| 3UTR TCA 72 bp | CCAGGAGAAACAGCCTTCTTTCAAGATGGTTTTCAGTaGAACAGACATCTTTATTTGGGGTGGCATGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: PGETAFFQDGFQ*NRHLYLGWHGL Trigger: TAGACCATGCCACCCCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAAAGAAGGCTGTTTCTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| 3UTR CCA 72 bp | TTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTaGGGTGGCATGGTCTATATAACCCTTGGATATAGG | + |
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Preference number: 3 (lower is better) Translates to: FKMVFSETDIFI*GGMVYITLGYR Trigger: CCTATATCCAAGGGTTATATAGACCATGCCACCCCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CCA 90 bp | TACCTCAGGGTGGTAGAGCTGGGGGATGGACTGACTCTGTGTGTGGGTAGATGCACAGTAAGGGAGAAATaGTGGGGAAGCTTAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: YLRVVELGDGLTLCVGRCTVREK*WGSLES Trigger: TGACTCTAAGCTTCCCCACCATTTCTCCCTTACTGT...GCATCTACCCACACACAGAGTCAGTCCATCCCCCAGCTCTACCACCCTGAGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CCA 90 bp | TACCTCAGGGTGGTAGAGCTGGGGGATGGACTGACTCTGTGTGTGGGTAGATGCACATTTGAGGTCAGTTaGAGGGTTCTTTGGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: YLRVVELGDGLTLCVGRCTFEVS*RVLWNK Trigger: TTTGTTCCAAAGAACCCTCCAACTGACCTCAAATGT...GCATCTACCCACACACAGAGTCAGTCCATCCCCCAGCTCTACCACCCTGAGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CCA 90 bp | TACCTCAGGGTGGTAGAGCTGGGGGATGGACTGACTCTGTGTGTGGGTAGATGCAGGAACATGATGTCATaGGAAAAACGAAAGAAATTC | + |
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Preference number: 4 (lower is better) Translates to: YLRVVELGDGLTLCVGRCRNMMS*EKRKKF Trigger: GAATTTCTTTCGTTTTTCCCATGACATCATGTTCCT...GCATCTACCCACACACAGAGTCAGTCCATCCCCCAGCTCTACCACCCTGAGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CCA 90 bp | GAGAAACAGCCTTCTTTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTGGCCACCAGCATCAGGATaGTGTGGGCTGCTCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: EKQPSFKMVFSETDIFIWPPASG*CGLLWF Trigger: AAACCAGAGCAGCCCACACCATCCTGATGCTGGTGG...CCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAAAGAAGGCTGTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CCA 90 bp | CCTACTCCTGCTGGTGTCAGGGTGAGATTTTTCAAGTTATGTACATGTTTTGACTTAAATGAATCACCATaGAGACACTGGTCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PTPAGVRVRFFKLCTCFDLNESP*RHWSRP Trigger: TGGCCTGGACCAGTGTCTCCATGGTGATTCATTTAA...GTCAAAACATGTACATAACTTGAAAAATCTCACCCTGACACCAGCAGGAGTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| 3UTR CAA 72 bp | GTAGCTGTCCTTTATAAAACCGATGAACAGGCTTATTaGTGCAGGCATGGTAGCAGAATTTCAGCCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VAVLYKTDEQAY*CRHGSRISASV Trigger: AACACTGGCTGAAATTCTGCTACCATGCCTGCACAAATAAGCCTGTTCATCGGTTTTATAAAGGACAGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CCA 90 bp | CCTACTCCTGCTGGTGTCAGGGTGAGATTTTTCAAGTTATGTACATGTTTTGACGCTCTGGTTTCAGCATaGCCTGTGTTTTTATGGTTA | + |
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Preference number: 4 (lower is better) Translates to: PTPAGVRVRFFKLCTCFDALVSA*PVFLWL Trigger: TAACCATAAAAACACAGGCCATGCTGAAACCAGAGC...GTCAAAACATGTACATAACTTGAAAAATCTCACCCTGACACCAGCAGGAGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR TCA 90 bp | CCTACTCCTGCTGGTGTCAGGGTGAGATTTTTCAAGTTATGTACATGTTTTGACATTTCTGTGGACCACTaGCATTCATTGGGATATAAG | + |
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Preference number: 4 (lower is better) Translates to: PTPAGVRVRFFKLCTCFDISVDH*HSLGYK Trigger: CTTATATCCCAATGAATGTCAGTGGTCCACAGAAAT...GTCAAAACATGTACATAACTTGAAAAATCTCACCCTGACACCAGCAGGAGTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR GCA 90 bp | TTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTGGGGTGGCATGGTCTATCAAACAGAAGGATGTTaGCCACAGTCCCAACTACAA | + |
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Preference number: 4 (lower is better) Translates to: FKMVFSETDIFIWGGMVYQTEGC*PQSQLQ Trigger: TTGTAGTTGGGACTGTGGGCAACATCCTTCTGTTTG...ATAGACCATGCCACCCCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR TCA 90 bp | GAGAAACAGCCTTCTTTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTGGATCAGTGTCATTGTGTaGTTTCTGTGGACCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: EKQPSFKMVFSETDIFIWISVIV*FLWTTD Trigger: GTCAGTGGTCCACAGAAATCACACAATGACACTGAT...CCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAAAGAAGGCTGTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR TCA 90 bp | ATGAAAGCAATAACACTAAAATCAGGGAAGACAGGCTGTCCACTCTTTTCCTTTTGGTGTCTGTTTAAATaGATCACCATGGAGACACTG | + |
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Preference number: 4 (lower is better) Translates to: MKAITLKSGKTGCPLFSFWCLFK*ITMETL Trigger: CAGTGTCTCCATGGTGATTCATTTAAACAGACACCA...AAAGGAAAAGAGTGGACAGCCTGTCTTCCCTGATTTTAGTGTTATTGCTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CCA 90 bp | TTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTGGGGTGGCATGGTCTATAGTTGGAGGGTTCTTTaGAACAAAATCAATCATGTC | + |
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Preference number: 4 (lower is better) Translates to: FKMVFSETDIFIWGGMVYSWRVL*NKINHV Trigger: GACATGATTGATTTTGTTCCAAAGAACCCTCCAACT...ATAGACCATGCCACCCCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR TCA 90 bp | GAGAAACAGCCTTCTTTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTGGATCAATCATGTCATGTaGATATGTCAAGAGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EKQPSFKMVFSETDIFIWINHVM*ICQEKE Trigger: CTCCTTCTCTTGACATATTCACATGACATGATTGAT...CCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAAAGAAGGCTGTTTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CCA 90 bp | ATGAAAGCAATAACACTAAAATCAGGGAAGACAGGCTGTCCACTCTTTTCCTTTATTGGAGAGAAATTATaGACAAACAGAAGGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: MKAITLKSGKTGCPLFSFIGEKL*TNRRML Trigger: CAACATCCTTCTGTTTGTCCATAATTTCTCTCCAAT...AAAGGAAAAGAGTGGACAGCCTGTCTTCCCTGATTTTAGTGTTATTGCTTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CCA 90 bp | ATGAAAGCAATAACACTAAAATCAGGGAAGACAGGCTGTCCACTCTTTTCCTTTGGAATCAGTCAAGATTaGAGAGAAATTATGGACAAA | + |
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Preference number: 4 (lower is better) Translates to: MKAITLKSGKTGCPLFSFGISQD*REIMDK Trigger: TTTGTCCATAATTTCTCTCCAATCTTGACTGATTCC...AAAGGAAAAGAGTGGACAGCCTGTCTTCCCTGATTTTAGTGTTATTGCTTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CAA 90 bp | TACCTCAGGGTGGTAGAGCTGGGGGATGGACTGACTCTGTGTGTGGGTAGATGCCAGTTGGAGGGTTCTTaGGAACAAAATCAATCATGT | + |
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Preference number: 5 (lower is better) Translates to: YLRVVELGDGLTLCVGRCQLEGS*EQNQSC Trigger: ACATGATTGATTTTGTTCCAAAGAACCCTCCAACTG...GCATCTACCCACACACAGAGTCAGTCCATCCCCCAGCTCTACCACCCTGAGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 90 bp | CTAGTCATGTGGATTTCCAGGCCCACACTGAAGAGCAGAGAACAATaGCCCCTAGGATCCCTAAAAATCAACAGTAAGGGAGAAATGGTG | + |
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Preference number: 5 (lower is better) Translates to: LVMWISRPTLKSREQ*PLGSLKINSKGEMV Trigger: CACCATTTCTCCCTTACTGTTGATTTTTAGGGATCCTAGGGGTCATTGTTCTCTGCTCTTCAGTGTGGGCCTGGAAATCCACATGACTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 90 bp | GAGGTCAGTTGGAGGGTTCTTTGGAACAAAATCAATCATGTCATGTaGATATGTCAAGAGAAGGAGCATGAATGCATTGGCCACAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: EVSWRVLWNKINHVM*ICQEKEHECIGHSQ Trigger: TTGGCTGTGGCCAATGCATTCATGCTCCTTCTCTTGACATATTCACATGACATGATTGATTTTGTTCCAAAGAACCCTCCAACTGACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS GCA 90 bp | GGTAGAACACATGTTTGTGCCTCGAGCCACCATGTGAAAGAAGTATaGAAGTTTACATTTGAGGTCAGTTGGAGGGTTCTTTGGAACAAA | + |
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Preference number: 5 (lower is better) Translates to: GRTHVCASSHHVKEV*KFTFEVSWRVLWNK Trigger: TTTGTTCCAAAGAACCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAGGCACAAACATGTGTTCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CAA 90 bp | TTCAAGATGGTTTTCAGTGAAACAGACATCTTTATTTGGGGTGGCATGGTCTATACAAACAGAAGGATGTaGCCCACAGTCCCAACTACA | + |
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Preference number: 5 (lower is better) Translates to: FKMVFSETDIFIWGGMVYTNRRM*PTVPTT Trigger: TGTAGTTGGGACTGTGGGCAACATCCTTCTGTTTGT...ATAGACCATGCCACCCCAAATAAAGATGTCTGTTTCACTGAAAACCATCTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 90 bp | TTGTGCCTCGAGCCACCATGTGAAAGAAGTATGCAAGTTTACATTTaGGGTCAGTTGGAGGGTTCTTTGGAACAAAATCAATCATGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LCLEPPCERSMQVYI*GQLEGSLEQNQSCH Trigger: ATGACATGATTGATTTTGTTCCAAAGAACCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAGGCACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS-3UTR CAA 90 bp | CCTACTCCTGCTGGTGTCAGGGTGAGATTTTTCAAGTTATGTACATGTTTTGACGGGAATCAGTCAAGATaGGAGAGAAATTATGGACAA | + |
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Preference number: 5 (lower is better) Translates to: PTPAGVRVRFFKLCTCFDGNQSR*ERNYGQ Trigger: TTGTCCATAATTTCTCTCCAATCTTGACTGATTCCC...GTCAAAACATGTACATAACTTGAAAAATCTCACCCTGACACCAGCAGGAGTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 90 bp | GAAATAAAATACAAATACAATCTAGAATATATAAGCTCACAAATGTaGCCACCAGCATCAGGATGGTGTGGGCTGCTCTGGTTTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: EIKYKYNLEYISSQM*PPASGWCGLLWFQH Trigger: ATGCTGAAACCAGAGCAGCCCACACCATCCTGATGCTGGTGGTCACATTTGTGAGCTTATATATTCTAGATTGTATTTGTATTTTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 90 bp | AGAGACGGAGCATATACAATTGCCTTTAGAATCAGTGTCATTGTGTaGTTTCTGTGGACCACTGACATTCATTGGGATATAAGCATTATT | + |
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Preference number: 5 (lower is better) Translates to: RDGAYTIAFRISVIV*FLWTTDIHWDISII Trigger: AATAATGCTTATATCCCAATGAATGTCAGTGGTCCACAGAAATCACACAATGACACTGATTCTAAAGGCAATTGTATATGCTCCGTCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS GCA 72 bp | CACAAATGTGACCACCAGCATCAGGATGGTGTGGGCTaGTCTGGTTTCAGCATGGCCTGTGTTTTTATGGTT | + |
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Preference number: 6 (lower is better) Translates to: HKCDHQHQDGVG*SGFSMACVFMV Trigger: AACCATAAAAACACAGGCCATGCTGAAACCAGAGCAGCCCACACCATCCTGATGCTGGTGGTCACATTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 72 bp | TGGATTTCCAGGCCCACACTGAAGAGCAGAGAACAATaGCCCCTAGGATCCCTAAAAATCAACAGTAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: WISRPTLKSREQ*PLGSLKINSKG Trigger: TCCCTTACTGTTGATTTTTAGGGATCCTAGGGGTCATTGTTCTCTGCTCTTCAGTGTGGGCCTGGAAATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS GCA 72 bp | CATGTTTGTGCCTCGAGCCACCATGTGAAAGAAGTATaGAAGTTTACATTTGAGGTCAGTTGGAGGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HVCASSHHVKEV*KFTFEVSWRVL Trigger: AAGAACCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAGGCACAAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS CCA 72 bp | CTGGTCCAGGCCATGATGCTAAGGAACATGATGTCATaGGAAAAACGAAAGAAATTCATGTCTACACTGACC | + |
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Preference number: 6 (lower is better) Translates to: LVQAMMLRNMMS*EKRKKFMSTLT Trigger: GGTCAGTGTAGACATGAATTTCTTTCGTTTTTCCCATGACATCATGTTCCTTAGCATCATGGCCTGGACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 72 bp | CAGGTAGAACACATGTTTGTGCCTCGAGCCACCATGTaGAAGAAGTATGCAAGTTTACATTTGAGGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: QVEHMFVPRATM*KKYASLHLRSV Trigger: AACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAGGCACAAACATGTGTTCTACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS CAA 72 bp | AAGATTGGAGAGAAATTATGGACAAACAGAAGGATGTaGCCCACAGTCCCAACTACAACATGGCAAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: KIGEKLWTNRRM*PTVPTTTWQSK Trigger: TTTGCTTTGCCATGTTGTAGTTGGGACTGTGGGCAACATCCTTCTGTTTGTCCATAATTTCTCTCCAATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS CAA 72 bp | TCATGTGAATATGTCAAGAGAAGGAGCATGAATGCATaGGCCACAGCCAAGTTGATTAGAATGACCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: SCEYVKRRSMNA*ATAKLIRMTCM Trigger: CATACAGGTCATTCTAATCAACTTGGCTGTGGCCAATGCATTCATGCTCCTTCTCTTGACATATTCACATGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS CAA 72 bp | ACGGAGCATATACAATTGCCTTTAGAATCAGTGTCATaGTGTGATTTCTGTGGACCACTGACATTCATTGGG | + |
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Preference number: 6 (lower is better) Translates to: TEHIQLPLESVS*CDFCGPLTFIG Trigger: CCCAATGAATGTCAGTGGTCCACAGAAATCACACAATGACACTGATTCTAAAGGCAATTGTATATGCTCCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS CAA 72 bp | ATGTCTACACTGACCCCAGAGACGGAGCATATACAATaGCCTTTAGAATCAGTGTCATTGTGTGATTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: MSTLTPETEHIQ*PLESVSLCDFC Trigger: ACAGAAATCACACAATGACACTGATTCTAAAGGCAATTGTATATGCTCCGTCTCTGGGGTCAGTGTAGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 72 bp | TGGAGGGTTCTTTGGAACAAAATCAATCATGTCATGTaGATATGTCAAGAGAAGGAGCATGAATGCATTGGC | + |
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Preference number: 6 (lower is better) Translates to: WRVLWNKINHVM*ICQEKEHECIG Trigger: GCCAATGCATTCATGCTCCTTCTCTTGACATATTCACATGACATGATTGATTTTGTTCCAAAGAACCCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 72 bp | GAGCCACCATGTGAAAGAAGTATGCAAGTTTACATTTaGGGTCAGTTGGAGGGTTCTTTGGAACAAAATCAA | + |
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Preference number: 6 (lower is better) Translates to: EPPCERSMQVYI*GQLEGSLEQNQ Trigger: TTGATTTTGTTCCAAAGAACCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS TCA 72 bp | GCATATACAATTGCCTTTAGAATCAGTGTCATTGTGTaGTTTCTGTGGACCACTGACATTCATTGGGATATA | + |
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Preference number: 6 (lower is better) Translates to: AYTIAFRISVIV*FLWTTDIHWDI Trigger: TATATCCCAATGAATGTCAGTGGTCCACAGAAATCACACAATGACACTGATTCTAAAGGCAATTGTATATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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| CDS CCA 72 bp | GTGAAAGAAGTATGCAAGTTTACATTTGAGGTCAGTTaGAGGGTTCTTTGGAACAAAATCAATCATGTCATG | + |
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Preference number: 6 (lower is better) Translates to: VKEVCKFTFEVS*RVLWNKINHVM Trigger: CATGACATGATTGATTTTGTTCCAAAGAACCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169556.3 |
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