Pregenerated sensors for VMN1R52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060816Ensembl transcript IDs: ENSMUST00000079832.3, ENSMUST00000226520.2, ENSMUST00000227100.2, ENSMUST00000227578.2, ENSMUST00000227893.2, ENSMUST00000228385.2, ENSMUST00000228394.2, ENSMUST00000228665.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGTGAGACACACATTTCCCATTCTGAACATCATGGCCATACAGTaGTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: HVRHTFPILNIMAIQ*CWRGHSHYCPISVH Trigger: GTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACCACTGTATGGCCATGATGTTCAGAATGGGAAATGTGTGTCTCACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR GCA 90 bp | TACAGTGGTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTaGACATGTCTACAGCACTCCAGTCCTGAATTGAAACTCCAACTT | + |
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Preference number: 1 (lower is better) Translates to: YSGVGEDIHIIVQSV*TCLQHSSPELKLQL Trigger: AAGTTGGAGTTTCAATTCAGGACTGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACCACTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR CCA 90 bp | AGACACACATTTCCCATTCTGAACATCATGGCCATACAGTGGTGTTaGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCT | + |
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Preference number: 1 (lower is better) Translates to: RHTFPILNIMAIQWC*RGHSHYCPISVHMS Trigger: AGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACCACTGTATGGCCATGATGTTCAGAATGGGAAATGTGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR TCA 90 bp | TTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAGTCCTGAATTaGAACTCCAACTTCATTCAGAAAAATTTGCACAATGTCAATTTC | + |
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Preference number: 1 (lower is better) Translates to: LSNQCAHVYSTPVLN*NSNFIQKNLHNVNF Trigger: GAAATTGACATTGTGCAAATTTTTCTGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGTGCTGTAGACATGTGCACACTGATTGGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR TCA 90 bp | CATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAGTCCTaGATTGAAACTCCAACTTCATTCAGAAAAATTTGCACAATGTCA | + |
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Preference number: 1 (lower is better) Translates to: HYCPISVHMSTALQS*IETPTSFRKICTMS Trigger: TGACATTGTGCAAATTTTTCTGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR GCA 90 bp | AGAAAAATTTGCACAATGTCAATTTCTTCAATACCTAGAACACAGTaGTGCATTTCATTCATGTTGGGTCCTCTGAGTCCTACCCTCTAT | + |
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Preference number: 1 (lower is better) Translates to: RKICTMSISSIPRTQ*CISFMLGPLSPTLY Trigger: ATAGAGGGTAGGACTCAGAGGACCCAACATGAATGAAATGCAGCACTGTGTTCTAGGTATTGAAGAAATTGACATTGTGCAAATTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGCAGATGGGAAACCCTTaGAAGGTGCTCCTCCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: ENSTLGGLADSGRTAVSQQMGNP*KVLLPK Trigger: TTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTG...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGAATGATGGCTCACTGTaGGAAAACTTACCCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: ENSTLGGLADSGRTAVSQNDGSL*ENLPSQ Trigger: CTGTGAGGGTAAGTTTTCTCACAGTGAGCCATCATT...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAACCTAGGTGGGCTAGCTaGCAGTGGCAGAACAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: RLRVGSSILEKTAEVAEQPRWAS*QWQNSC Trigger: ACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGG...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGACTCCAGTCCTGAATTaGAACTCCAACTTCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: ENSTLGGLADSGRTAVSQTPVLN*NSNFIQ Trigger: CTGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGT...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGACACATTTCCCATTCTaGACATCATGGCCATACAGT | + |
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Preference number: 2 (lower is better) Translates to: ENSTLGGLADSGRTAVSQTHFPF*TSWPYS Trigger: ACTGTATGGCCATGATGTTCAGAATGGGAAATGTGT...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCGTGGCAGAACAGCTGTaGGCCAGACTGCTCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: GENCRSGRTIDLSRSENSVAEQL*ARLLKA Trigger: AGCCTTGAGCAGTCTGGCTCACAGCTGTTCTGCCAC...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGACAGAAATTTCCCTTTaGAGAGTAGATTCAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: ENSTLGGLADSGRTAVSQTEISL*RVDSEL Trigger: GAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGT...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGCTAGATTCTGAATACTaGATTGTACTTCATGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: ENSTLGGLADSGRTAVSQLDSEY*IVLHAD Trigger: GTCTGCATGAAGTACAATTCAGTATTCAGAATCTAG...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGAAAAGGCTGATTAAATaGAGAGCTTGTATCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: ENSTLGGLADSGRTAVSQKRLIK*RACILQ Trigger: CTGAAGGATACAAGCTCTTCATTTAATCAGCCTTTT...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGATACCTAGAACACAGTaGTGCATTTCATTCATGTTG | + |
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Preference number: 2 (lower is better) Translates to: ENSTLGGLADSGRTAVSQIPRTQ*CISFML Trigger: CAACATGAATGAAATGCAGCACTGTGTTCTAGGTAT...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAACAGATGGGAAACCCTTaGAAGGTGCTCCTCCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: RLRVGSSILEKTAEVAEQQMGNP*KVLLPK Trigger: TTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTG...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAAACAGCACTCCAGTCCTaGATTGAAACTCCAACTTCA | + |
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Preference number: 2 (lower is better) Translates to: RLRVGSSILEKTAEVAEQTALQS*IETPTS Trigger: TGAAGTTGGAGTTTCAATTCAGGACTGGAGTGCTGT...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAAATTGTCCAATCAGTGTaGACATGTCTACAGCACTCC | + |
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Preference number: 2 (lower is better) Translates to: RLRVGSSILEKTAEVAEQIVQSV*TCLQHS Trigger: GGAGTGCTGTAGACATGTGCACACTGATTGGACAAT...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCGAAACCCTTGCAAGGTaGTCCTCCCTAAAAAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GENCRSGRTIDLSRSENSETLAR*SSLKRL Trigger: CAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTC...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR CAA 90 bp | GAACATCATGGCCATACAGTGGTGTTGGAGAGGACATTCACATTATaGTCCAATCAGTGTGCACATGTCTACAGCACTCCAGTCCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: EHHGHTVVLERTFTL*SNQCAHVYSTPVLN Trigger: ATTCAGGACTGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACCACTGTATGGCCATGATGTTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAAAATGATGGCTCACTGTaGGAAAACTTACCCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: YTRWETLARCSSLKRLIKNDGSL*ENLPSQ Trigger: CTGTGAGGGTAAGTTTTCTCACAGTGAGCCATCATT...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCAGCTCTGGTGCCAAATaGTGGCTCACTGTGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GENCRSGRTIDLSRSENSSSGAK*WLTVRK Trigger: TTTTCTCACAGTGAGCCATCATTTGGCACCAGAGCT...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCAGCTCTGGTGCCAAATaGTGGCTCACTGTGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: VLERTFTLLSNQCAHVYSSSGAK*WLTVRK Trigger: TTTTCTCACAGTGAGCCATCATTTGGCACCAGAGCT...GCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAAACTCCAGTCCTGAATTaGAACTCCAACTTCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: RLRVGSSILEKTAEVAEQTPVLN*NSNFIQ Trigger: CTGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGT...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR CAA 90 bp | GAGACACACATTTCCCATTCTGAACATCATGGCCATACAGTGGTGTaGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTC | + |
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Preference number: 2 (lower is better) Translates to: ETHISHSEHHGHTVV*ERTFTLLSNQCAHV Trigger: GACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACCACTGTATGGCCATGATGTTCAGAATGGGAAATGTGTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAAATGATGGCTCACTGTaGGAAAACTTACCCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPNDGSL*ENLPSQ Trigger: CTGTGAGGGTAAGTTTTCTCACAGTGAGCCATCATT...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCAATGATGGCTCACTGTaGGAAAACTTACCCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: VLERTFTLLSNQCAHVYSNDGSL*ENLPSQ Trigger: CTGTGAGGGTAAGTTTTCTCACAGTGAGCCATCATT...GCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACAGCTCTGGTGCCAAATaGTGGCTCACTGTGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGENCRSGRTIDLSRSENSSGAK*WLTVRK Trigger: TTTTCTCACAGTGAGCCATCATTTGGCACCAGAGCT...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAAACTCCAGTCCTGAATTaGAACTCCAACTTCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: YTRWETLARCSSLKRLIKTPVLN*NSNFIQ Trigger: CTGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGT...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCACAGCACTCCAGTCCTaGATTGAAACTCCAACTTCA | + |
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Preference number: 2 (lower is better) Translates to: GENCRSGRTIDLSRSENSTALQS*IETPTS Trigger: TGAAGTTGGAGTTTCAATTCAGGACTGGAGTGCTGT...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAAAAACCATGCACATTATaGCATAGCTCTGGTGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: YTRWETLARCSSLKRLIKKPCTL*HSSGAK Trigger: TTTGGCACCAGAGCTATGGCATAATGTGCATGGTTT...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACAATGATGGCTCACTGTaGGAAAACTTACCCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: LGENCRSGRTIDLSRSENNDGSL*ENLPSQ Trigger: CTGTGAGGGTAAGTTTTCTCACAGTGAGCCATCATT...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGATTGTGACAAGCCTGATCACCTTTCAGATTTTCTCAGAAGAGAGTTAAGGAGCTCTGGTGCCAAATaGTGGCTCACTGTGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SDCDKPDHLSDFLRRELRSSGAK*WLTVRK Trigger: TTTTCTCACAGTGAGCCATCATTTGGCACCAGAGCT...CCTTAACTCTCTTCTGAGAAAATCTGAAAGGTGATCAGGCTTGTCACAATCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAACTAGATTCTGAATACTaGATTGTACTTCATGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: RLRVGSSILEKTAEVAEQLDSEY*IVLHAD Trigger: GTCTGCATGAAGTACAATTCAGTATTCAGAATCTAG...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAAATAACTGCTCTTGTGTaGCAGAAATTTCCCTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YTRWETLARCSSLKRLIKITALV*QKFPFA Trigger: TGCAAAGGGAAATTTCTGTCACACAAGAGCAGTTAT...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAAAACCATGCACATTATaGCATAGCTCTGGTGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPKPCTL*HSSGAK Trigger: TTTGGCACCAGAGCTATGGCATAATGTGCATGGTTT...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACATTGTCCAATCAGTGTaGACATGTCTACAGCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGENCRSGRTIDLSRSENIVQSV*TCLQHS Trigger: GGAGTGCTGTAGACATGTGCACACTGATTGGACAAT...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCATAACTGCTCTTGTGTaGCAGAAATTTCCCTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VLERTFTLLSNQCAHVYSITALV*QKFPFA Trigger: TGCAAAGGGAAATTTCTGTCACACAAGAGCAGTTAT...GCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGATAACTGCTCTTGTGTaGCAGAAATTTCCCTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GVGEDIHIIVQSVCTCLQITALV*QKFPFA Trigger: TGCAAAGGGAAATTTCTGTCACACAAGAGCAGTTAT...CTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAATAACTGCTCTTGTGTaGCAGAAATTTCCCTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPITALV*QKFPFA Trigger: TGCAAAGGGAAATTTCTGTCACACAAGAGCAGTTAT...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACACTCCAGTCCTGAATTaGAACTCCAACTTCATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LGENCRSGRTIDLSRSENTPVLN*NSNFIQ Trigger: CTGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGT...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACAAACCATGCACATTATaGCATAGCTCTGGTGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGENCRSGRTIDLSRSENKPCTL*HSSGAK Trigger: TTTGGCACCAGAGCTATGGCATAATGTGCATGGTTT...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAACAGAAATTTCCCTTTaGAGAGTAGATTCAGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPTEISL*RVDSEL Trigger: GAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGT...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCACAGAAATTTCCCTTTaGAGAGTAGATTCAGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GENCRSGRTIDLSRSENSTEISL*RVDSEL Trigger: GAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGT...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAATTGTTTTCCTATATCTaGAATGTCCTAGATCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: RLRVGSSILEKTAEVAEQLFSYI*NVLDLS Trigger: GCTAAGATCTAGGACATTCCAGATATAGGAAAACAA...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGATTGTGACAAGCCTGATCACCTTTCAGATTTTCTCAGAAGAGAGTTAAGGAAACCATGCACATTATaGCATAGCTCTGGTGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SDCDKPDHLSDFLRRELRKPCTL*HSSGAK Trigger: TTTGGCACCAGAGCTATGGCATAATGTGCATGGTTT...CCTTAACTCTCTTCTGAGAAAATCTGAAAGGTGATCAGGCTTGTCACAATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACACAGAAATTTCCCTTTaGAGAGTAGATTCAGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LGENCRSGRTIDLSRSENTEISL*RVDSEL Trigger: GAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGT...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCATACCTAGAACACAGTaGTGCATTTCATTCATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: VLERTFTLLSNQCAHVYSIPRTQ*CISFML Trigger: CAACATGAATGAAATGCAGCACTGTGTTCTAGGTAT...GCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAATACCTAGAACACAGTaGTGCATTTCATTCATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPIPRTQ*CISFML Trigger: CAACATGAATGAAATGCAGCACTGTGTTCTAGGTAT...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGATACCTAGAACACAGTaGTGCATTTCATTCATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: GVGEDIHIIVQSVCTCLQIPRTQ*CISFML Trigger: CAACATGAATGAAATGCAGCACTGTGTTCTAGGTAT...CTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | CATGGACACACATGTGTGTGTTTCATATCATGTCATTATATATGCTGTTTACCTAGCTCTGGTGCCAAATaGTGGCTCACTGTGAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HGHTCVCFISCHYICCLPSSGAK*WLTVRK Trigger: TTTTCTCACAGTGAGCCATCATTTGGCACCAGAGCT...AGGTAAACAGCATATATAATGACATGATATGAAACACACACATGTGTGTCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACAAAAGGCTGATTAAATaGAGAGCTTGTATCCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LGENCRSGRTIDLSRSENKRLIK*RACILQ Trigger: CTGAAGGATACAAGCTCTTCATTTAATCAGCCTTTT...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCAAACCATGCACATTATaGCATAGCTCTGGTGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TEISLCRVDSELISISSCKPCTL*HSSGAK Trigger: TTTGGCACCAGAGCTATGGCATAATGTGCATGGTTT...GCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCTTGTTTTCCTATATCTaGAATGTCCTAGATCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: VLERTFTLLSNQCAHVYSLFSYI*NVLDLS Trigger: GCTAAGATCTAGGACATTCCAGATATAGGAAAACAA...GCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTTGTTTTCCTATATCTaGAATGTCCTAGATCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LGENCRSGRTIDLSRSENLFSYI*NVLDLS Trigger: GCTAAGATCTAGGACATTCCAGATATAGGAAAACAA...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR CAA 90 bp | ATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAGTCCTGAATaGAAACTCCAACTTCATTCAGAAAAATTTGCACAATGTCAATTT | + |
|
Preference number: 2 (lower is better) Translates to: IVQSVCTCLQHSSPE*KLQLHSEKFAQCQF Trigger: AAATTGACATTGTGCAAATTTTTCTGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGTGCTGTAGACATGTGCACACTGATTGGACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCCTAGATTCTGAATACTaGATTGTACTTCATGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TEISLCRVDSELISISSCLDSEY*IVLHAD Trigger: GTCTGCATGAAGTACAATTCAGTATTCAGAATCTAG...GCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCTCCTTGTTTTCCTATATCTaGAATGTCCTAGATCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: EISLCRVDSELISISSCSLFSYI*NVLDLS Trigger: GCTAAGATCTAGGACATTCCAGATATAGGAAAACAA...GGAGCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCTTGTTTTCCTATATCTaGAATGTCCTAGATCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: TEISLCRVDSELISISSCLFSYI*NVLDLS Trigger: GCTAAGATCTAGGACATTCCAGATATAGGAAAACAA...GCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGGACAGAAATTTCCCTTaGCAGAGTAGATTCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ENSTLGGLADSGRTAVSQDRNFP*QSRFRA Trigger: AGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGTC...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR CCA 72 bp | CAGGATTGCCTCAGGAAGACAGGTTCAGACTCAGAGTaGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QDCLRKTGSDSE*VAASWRKLQKW Trigger: CCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCTGAACCTGTCTTCCTGAGGCAATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGAGGACATTCACATTATaGTCCAATCAGTGTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: ENSTLGGLADSGRTAVSQRTFTL*SNQCAH Trigger: ATGTGCACACTGATTGGACAATAATGTGAATGTCCT...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGGTTAAGGGAAAACATTaGCAATCATTCAGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ENSTLGGLADSGRTAVSQVKGKH*QSFSVC Trigger: ACACACACTGAATGATTGCAAATGTTTTCCCTTAAC...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAAGGCCATACAGTGGTGTaGGAGAGGACATTCACATTA | + |
|
Preference number: 3 (lower is better) Translates to: YTRWETLARCSSLKRLIKGHTVV*ERTFTL Trigger: TAATGTGAATGTCCTCTCCAACACCACTGTATGGCC...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR CCA 72 bp | AAGACAGGTTCAGACTCAGAGTGGGTAGCAGCATCTTaGAGAAAACTGCAGAAGTGGCAGAACAATAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: KTGSDSEWVAAS*RKLQKWQNNRP Trigger: AGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCTGAACCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAAGACAGAAATTTCCCTTaGCAGAGTAGATTCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLRVGSSILEKTAEVAEQDRNFP*QSRFRA Trigger: AGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGTC...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCGGCCATACAGTGGTGTaGGAGAGGACATTCACATTA | + |
|
Preference number: 3 (lower is better) Translates to: GENCRSGRTIDLSRSENSGHTVV*ERTFTL Trigger: TAATGTGAATGTCCTCTCCAACACCACTGTATGGCC...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAACACTCCAGTCCTGAATaGAAACTCCAACTTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: YTRWETLARCSSLKRLIKHSSPE*KLQLHS Trigger: TGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGTG...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACGGCCATACAGTGGTGTaGGAGAGGACATTCACATTA | + |
|
Preference number: 3 (lower is better) Translates to: LGENCRSGRTIDLSRSENGHTVV*ERTFTL Trigger: TAATGTGAATGTCCTCTCCAACACCACTGTATGGCC...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAAGTTAAGGGAAAACATTaGCAATCATTCAGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLRVGSSILEKTAEVAEQVKGKH*QSFSVC Trigger: ACACACACTGAATGATTGCAAATGTTTTCCCTTAAC...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGGGGGCAATGAAGAGATaGTCTTTAATCAGCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GVGEDIHIIVQSVCTCLQGAMKR*SLISTD Trigger: ATCTGTGCTGATTAAAGACAATCTCTTCATTGCCCC...CTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCGGGGCAATGAAGAGATaGTCTTTAATCAGCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GENCRSGRTIDLSRSENSGAMKR*SLISTD Trigger: ATCTGTGCTGATTAAAGACAATCTCTTCATTGCCCC...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCGGGGCAATGAAGAGATaGTCTTTAATCAGCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLERTFTLLSNQCAHVYSGAMKR*SLISTD Trigger: ATCTGTGCTGATTAAAGACAATCTCTTCATTGCCCC...GCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAGGGGCAATGAAGAGATaGTCTTTAATCAGCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPGAMKR*SLISTD Trigger: ATCTGTGCTGATTAAAGACAATCTCTTCATTGCCCC...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAGACAGAAATTTCCCTTaGCAGAGTAGATTCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPDRNFP*QSRFRA Trigger: AGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGTC...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCCACTCCAGTCCTGAATaGAAACTCCAACTTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GENCRSGRTIDLSRSENSHSSPE*KLQLHS Trigger: TGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGTG...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAAAGGACATTCACATTATaGTCCAATCAGTGTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: YTRWETLARCSSLKRLIKRTFTL*SNQCAH Trigger: ATGTGCACACTGATTGGACAATAATGTGAATGTCCT...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR CCA 72 bp | TTTCCCATTCTGAACATCATGGCCATACAGTGGTGTTaGAGAGGACATTCACATTATTGTCCAATCAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FPILNIMAIQWC*RGHSHYCPISV Trigger: CACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACCACTGTATGGCCATGATGTTCAGAATGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR CCA 72 bp | CACACATTTCCCATTCTGAACATCATGGCCATACAGTaGTGTTGGAGAGGACATTCACATTATTGTCCAATC | + |
|
Preference number: 3 (lower is better) Translates to: HTFPILNIMAIQ*CWRGHSHYCPI Trigger: GATTGGACAATAATGTGAATGTCCTCTCCAACACCACTGTATGGCCATGATGTTCAGAATGGGAAATGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAAATTCTGAATACTGAATaGTACTTCATGCAGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: YTRWETLARCSSLKRLIKILNTE*YFMQTE Trigger: CTCTGTCTGCATGAAGTACAATTCAGTATTCAGAAT...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACGACAGAAATTTCCCTTaGCAGAGTAGATTCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGENCRSGRTIDLSRSENDRNFP*QSRFRA Trigger: AGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGTC...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACCACTCCAGTCCTGAATaGAAACTCCAACTTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LGENCRSGRTIDLSRSENHSSPE*KLQLHS Trigger: TGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGTG...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCAGGACATTCACATTATaGTCCAATCAGTGTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: GENCRSGRTIDLSRSENSRTFTL*SNQCAH Trigger: ATGTGCACACTGATTGGACAATAATGTGAATGTCCT...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR TCA 72 bp | CCAATCAGTGTGCACATGTCTACAGCACTCCAGTCCTaGATTGAAACTCCAACTTCATTCAGAAAAATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PISVHMSTALQS*IETPTSFRKIC Trigger: GCAAATTTTTCTGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGTGCTGTAGACATGTGCACACTGATTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGGTTAAGGGAAAACATTaGCAATCATTCAGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GVGEDIHIIVQSVCTCLQVKGKH*QSFSVC Trigger: ACACACACTGAATGATTGCAAATGTTTTCCCTTAAC...CTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAATTCTGAATACTGAATaGTACTTCATGCAGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPILNTE*YFMQTE Trigger: CTCTGTCTGCATGAAGTACAATTCAGTATTCAGAAT...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCATTCTGAATACTGAATaGTACTTCATGCAGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GENCRSGRTIDLSRSENSILNTE*YFMQTE Trigger: CTCTGTCTGCATGAAGTACAATTCAGTATTCAGAAT...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACAGGACATTCACATTATaGTCCAATCAGTGTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LGENCRSGRTIDLSRSENRTFTL*SNQCAH Trigger: ATGTGCACACTGATTGGACAATAATGTGAATGTCCT...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR TCA 72 bp | CAGTGTGCACATGTCTACAGCACTCCAGTCCTGAATTaGAACTCCAACTTCATTCAGAAAAATTTGCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: QCAHVYSTPVLN*NSNFIQKNLHN Trigger: ATTGTGCAAATTTTTCTGAATGAAGTTGGAGTTTCAATTCAGGACTGGAGTGCTGTAGACATGTGCACACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | GAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCTCCGTTAAGGGAAAACATTaGCAATCATTCAGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: EISLCRVDSELISISSCSVKGKH*QSFSVC Trigger: ACACACACTGAATGATTGCAAATGTTTTCCCTTAAC...GGAGCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | GAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCTCCATTCTGAATACTGAATaGTACTTCATGCAGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EISLCRVDSELISISSCSILNTE*YFMQTE Trigger: CTCTGTCTGCATGAAGTACAATTCAGTATTCAGAAT...GGAGCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR TCA 72 bp | TTTCCATTAGTTCATGCTCCAGAATCTCCTAGATTCTaGATACTGAATTGTACTTCATGCAGACAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FPLVHAPESPRF*ILNCTSCRQRK Trigger: TTTCCTCTGTCTGCATGAAGTACAATTCAGTATTCAGAATCTAGGAGATTCTGGAGCATGAACTAATGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR GCA 72 bp | TACAATAACTGCTCTTGTGTGACAGAAATTTCCCTTTaGAGAGTAGATTCAGAGCTCATTTCCATTAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: YNNCSCVTEISL*RVDSELISISS Trigger: TGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGTCACACAAGAGCAGTTATTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGACACACATGTGTGTGTTTCATATCATGTCATTATATATGCTGTTTACCTGTTAAGGGAAAACATTaGCAATCATTCAGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HGHTCVCFISCHYICCLPVKGKH*QSFSVC Trigger: ACACACACTGAATGATTGCAAATGTTTTCCCTTAAC...AGGTAAACAGCATATATAATGACATGATATGAAACACACACATGTGTGTCCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR GCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGGTCCTGAGGGCTCGTTaGTCTGGAGTTGCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ENSTLGGLADSGRTAVSQVLRAR*SGVALG Trigger: TCCCAAAGCAACTCCAGAGCAACGAGCCCTCAGGAC...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACCAATGGGCAAGTCCGTaGGTCTGGGCCTGTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGENCRSGRTIDLSRSENQWASP*VWACAH Trigger: GTGGGCACAGGCCCAGACTCACGGACTTGCCCATTG...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGAAACAGAGAGGCTCCTaGAAAACCTGTGCAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ENSTLGGLADSGRTAVSQKQRGS*KTCARK Trigger: TTTTCTTGCACAGGTTTTTCAGGAGCCTCTCTGTTT...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGGTGGAAAAGGTATGTTaGATTGATGAACTCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ENSTLGGLADSGRTAVSQVEKVC*IDELKG Trigger: ACCCTTGAGTTCATCAATGCAACATACCTTTTCCAC...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| CDS-3UTR GCA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAAGTCCTGAGGGCTCGTTaGTCTGGAGTTGCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTRWETLARCSSLKRLIKVLRAR*SGVALG Trigger: TCCCAAAGCAACTCCAGAGCAACGAGCCCTCAGGAC...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAGTCCTGAGGGCTCGTTaGTCTGGAGTTGCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPVLRAR*SGVALG Trigger: TCCCAAAGCAACTCCAGAGCAACGAGCCCTCAGGAC...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCGTCCTGAGGGCTCGTTaGTCTGGAGTTGCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GENCRSGRTIDLSRSENSVLRAR*SGVALG Trigger: TCCCAAAGCAACTCCAGAGCAACGAGCCCTCAGGAC...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACTCCACCCTAGGTGGGCTAGCTGACAGTGGCAGAACAGCTGTGAGCCAGCTCCTGAAAAACCTGTaGAAGAAAATGACTAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ENSTLGGLADSGRTAVSQLLKNL*KKMTSL Trigger: TAAACTAGTCATTTTCTTGCACAGGTTTTTCAGGAG...CTGGCTCACAGCTGTTCTGCCACTGTCAGCTAGCCCACCTAGGGTGGAGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
||
| CDS-3UTR TCA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAATTTGGGAGAAAGTTTTaGGTTCTGAAGGCGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTRWETLARCSSLKRLIKFGRKF*VLKALG Trigger: TCCCAGCGCCTTCAGAACTCAAAACTTTCTCCCAAA...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR CAA 72 bp | GGCCATACAGTGGTGTTGGAGAGGACATTCACATTATaGTCCAATCAGTGTGCACATGTCTACAGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: GHTVVLERTFTL*SNQCAHVYSTP Trigger: TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACCACTGTATGGCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCGTGGGGAATTCTGTTTaGGCTTTGCTAAGTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GENCRSGRTIDLSRSENSVGNSV*ALLSES Trigger: GCTCTCACTTAGCAAAGCTCAAACAGAATTCCCCAC...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAGTGGGGAATTCTGTTTaGGCTTTGCTAAGTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPVGNSV*ALLSES Trigger: GCTCTCACTTAGCAAAGCTCAAACAGAATTCCCCAC...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | GGTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGGTGGGGAATTCTGTTTaGGCTTTGCTAAGTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GVGEDIHIIVQSVCTCLQVGNSV*ALLSES Trigger: GCTCTCACTTAGCAAAGCTCAAACAGAATTCCCCAC...CTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCATTTGGGAGAAAGTTTTaGGTTCTGAAGGCGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPFGRKF*VLKALG Trigger: TCCCAGCGCCTTCAGAACTCAAAACTTTCTCCCAAA...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | GTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCTTTGGGAGAAAGTTTTaGGTTCTGAAGGCGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: VLERTFTLLSNQCAHVYSFGRKF*VLKALG Trigger: TCCCAGCGCCTTCAGAACTCAAAACTTTCTCCCAAA...GCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR GCA 90 bp | ACAGAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCGTCCTGAGGGCTCGTTaGTCTGGAGTTGCTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: TEISLCRVDSELISISSCVLRAR*SGVALG Trigger: TCCCAAAGCAACTCCAGAGCAACGAGCCCTCAGGAC...GCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTTTGGGAGAAAGTTTTaGGTTCTGAAGGCGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LGENCRSGRTIDLSRSENFGRKF*VLKALG Trigger: TCCCAGCGCCTTCAGAACTCAAAACTTTCTCCCAAA...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | AGACTCAGAGTGGGTAGCAGCATCTTGGAGAAAACTGCAGAAGTGGCAGAACAATTCTTGAGTAGGAGATaGTGCTGTCAAATGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: RLRVGSSILEKTAEVAEQFLSRR*CCQMLT Trigger: TGTCAACATTTGACAGCATCATCTCCTACTCAAGAA...TTGTTCTGCCACTTCTGCAGTTTTCTCCAAGATGCTGCTACCCACTCTGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCAAACAGAGAGGCTCCTaGAAAACCTGTGCAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: GENCRSGRTIDLSRSENSKQRGS*KTCARK Trigger: TTTTCTTGCACAGGTTTTTCAGGAGCCTCTCTGTTT...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | GAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCTCCTTTGGGAGAAAGTTTTaGGTTCTGAAGGCGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: EISLCRVDSELISISSCSFGRKF*VLKALG Trigger: TCCCAGCGCCTTCAGAACTCAAAACTTTCTCCCAAA...GGAGCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | TCAGATTGTGACAAGCCTGATCACCTTTCAGATTTTCTCAGAAGAGAGTTAAGGTTTGGGAGAAAGTTTTaGGTTCTGAAGGCGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SDCDKPDHLSDFLRRELRFGRKF*VLKALG Trigger: TCCCAGCGCCTTCAGAACTCAAAACTTTCTCCCAAA...CCTTAACTCTCTTCTGAGAAAATCTGAAAGGTGATCAGGCTTGTCACAATCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAATTCTTGAGTAGGAGATaGTGCTGTCAAATGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: YTRWETLARCSSLKRLIKFLSRR*CCQMLT Trigger: TGTCAACATTTGACAGCATCATCTCCTACTCAAGAA...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR GCA 90 bp | ACAGAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCTGGGACCGAGTCTTATaGCAAATGGGGACGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TEISLCRVDSELISISSCWDRVL*QMGTCF Trigger: GAAACACGTCCCCATTTGGCATAAGACTCGGTCCCA...GCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227100.2 |
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| CDS-3UTR TCA 90 bp | GTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCTTCTTGAGTAGGAGATaGTGCTGTCAAATGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: VLERTFTLLSNQCAHVYSFLSRR*CCQMLT Trigger: TGTCAACATTTGACAGCATCATCTCCTACTCAAGAA...GCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| 3UTR CAA 72 bp | ATTTCCCATTCTGAACATCATGGCCATACAGTGGTGTaGGAGAGGACATTCACATTATTGTCCAATCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: ISHSEHHGHTVV*ERTFTLLSNQC Trigger: ACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACCACTGTATGGCCATGATGTTCAGAATGGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | GGTGTTGGAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGAGAAGAAGGCATTTCTaGTGTAAACACTACAGTACA | + |
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Preference number: 4 (lower is better) Translates to: GVGEDIHIIVQSVCTCLQRRRHF*CKHYST Trigger: TGTACTGTAGTGTTTACATCAGAAATGCCTTCTTCT...CTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTCCAACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | GAGAGGACATTCACATTATTGTCCAATCAGTGTGCACATGTCTACAGCACTCCAAGAAGAAGGCATTTCTaGTGTAAACACTACAGTACA | + |
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Preference number: 4 (lower is better) Translates to: ERTFTLLSNQCAHVYSTPRRRHF*CKHYST Trigger: TGTACTGTAGTGTTTACATCAGAAATGCCTTCTTCT...TGGAGTGCTGTAGACATGTGCACACTGATTGGACAATAATGTGAATGTCCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | TCAGATTGTGACAAGCCTGATCACCTTTCAGATTTTCTCAGAAGAGAGTTAAGGAAACAGAGAGGCTCCTaGAAAACCTGTGCAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: SDCDKPDHLSDFLRRELRKQRGS*KTCARK Trigger: TTTTCTTGCACAGGTTTTTCAGGAGCCTCTCTGTTT...CCTTAACTCTCTTCTGAGAAAATCTGAAAGGTGATCAGGCTTGTCACAATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTTCTTGAGTAGGAGATaGTGCTGTCAAATGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: LGENCRSGRTIDLSRSENFLSRR*CCQMLT Trigger: TGTCAACATTTGACAGCATCATCTCCTACTCAAGAA...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226520.2 ENSMUST00000227100.2 ENSMUST00000227578.2 ENSMUST00000227893.2 ENSMUST00000228385.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR GCA 90 bp | TACACCAGATGGGAAACCCTTGCAAGGTGCTCCTCCCTAAAAAGGCTGATTAAACTCCTGAAAAACCTGTaGAAGAAAATGACTAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: YTRWETLARCSSLKRLIKLLKNL*KKMTSL Trigger: TAAACTAGTCATTTTCTTGCACAGGTTTTTCAGGAG...TTTAATCAGCCTTTTTAGGGAGGAGCACCTTGCAAGGGTTTCCCATCTGGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | CTTGGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACAGAAGAAGGCATTTCTaGTGTAAACACTACAGTACA | + |
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Preference number: 4 (lower is better) Translates to: LGENCRSGRTIDLSRSENRRRHF*CKHYST Trigger: TGTACTGTAGTGTTTACATCAGAAATGCCTTCTTCT...GTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR GCA 90 bp | GGAGAAAACTGCAGAAGTGGCAGAACAATAGACCTATCTAGGTCTGAAAACTCCCTCCTGAAAAACCTGTaGAAGAAAATGACTAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: GENCRSGRTIDLSRSENSLLKNL*KKMTSL Trigger: TAAACTAGTCATTTTCTTGCACAGGTTTTTCAGGAG...GGAGTTTTCAGACCTAGATAGGTCTATTGTTCTGCCACTTCTGCAGTTTTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR TCA 90 bp | TCAGATTGTGACAAGCCTGATCACCTTTCAGATTTTCTCAGAAGAGAGTTAAGGAGAAGAAGGCATTTCTaGTGTAAACACTACAGTACA | + |
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Preference number: 4 (lower is better) Translates to: SDCDKPDHLSDFLRRELRRRRHF*CKHYST Trigger: TGTACTGTAGTGTTTACATCAGAAATGCCTTCTTCT...CCTTAACTCTCTTCTGAGAAAATCTGAAAGGTGATCAGGCTTGTCACAATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS-3UTR GCA 90 bp | GAAATTTCCCTTTGCAGAGTAGATTCAGAGCTCATTTCCATTAGTTCATGCTCCCTCCTGAAAAACCTGTaGAAGAAAATGACTAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: EISLCRVDSELISISSCSLLKNL*KKMTSL Trigger: TAAACTAGTCATTTTCTTGCACAGGTTTTTCAGGAG...GGAGCATGAACTAATGGAAATGAGCTCTGAATCTACTCTGCAAAGGGAAATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS GCA 90 bp | ATTAGGGCCACAAAGCCAATGGGCAAGTCCGTGAGTCTGGGCCTGTaGCCACGAATGAACATGAAGGTGTGGAAGAGGAGAAGGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: IRATKPMGKSVSLGL*PRMNMKVWKRRRQL Trigger: CAGCTGCCTTCTCCTCTTCCACACCTTCATGTTCATTCGTGGGCACAGGCCCAGACTCACGGACTTGCCCATTGGCTTTGTGGCCCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079832.3 ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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| CDS TCA 72 bp | GGCTCGTTGCTCTGGAGTTGCTTTGGGAGAAAGTTTTaGGTTCTGAAGGCGCTGGGACCGAGTCTTATGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSLLWSCFGRKF*VLKALGPSLMP Trigger: TGGCATAAGACTCGGTCCCAGCGCCTTCAGAACTCAAAACTTTCTCCCAAAGCAACTCCAGAGCAACGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227100.2 |
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| CDS TCA 72 bp | TGCTCTGGAGTTGCTTTGGGAGAAAGTTTTGAGTTCTaGAGGCGCTGGGACCGAGTCTTATGCCAAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: CSGVALGESFEF*RRWDRVLCQMG Trigger: CCCCATTTGGCATAAGACTCGGTCCCAGCGCCTTCAGAACTCAAAACTTTCTCCCAAAGCAACTCCAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227100.2 |
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| CDS GCA 72 bp | CAAGTGGCACAAACAGAGAGGCTCCTGAAAAACCTGTaGAAGAAAATGACTAGTTTACATGTGATGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: QVAQTERLLKNL*KKMTSLHVMSS Trigger: GGATGACATCACATGTAAACTAGTCATTTTCTTGCACAGGTTTTTCAGGAGCCTCTCTGTTTGTGCCACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079832.3 ENSMUST00000226520.2 ENSMUST00000227893.2 ENSMUST00000228394.2 ENSMUST00000228665.2 |
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