RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R51 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062818

Ensembl transcript IDs: ENSMUST00000072859.6, ENSMUST00000174204.3, ENSMUST00000226542.2, ENSMUST00000226977.2, ENSMUST00000227109.2, ENSMUST00000227766.2, ENSMUST00000227876.2, ENSMUST00000227911.2, ENSMUST00000228880.2

Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTATGTGGTCTAGGCAAAGTAACACAGAGATCCTTGGAATTCACCTaGCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTAC +
Preference number: 1 (lower is better)
Translates to: LCGLGKVTQRSLEFT*HLPIGTLVVKGAWY
Trigger: GTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAGGTGAATTCCAAGGATCTCTGTGTTACTTTGCCTAGACCACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR TCA 90 bp CCATCCCATAGCACCCTGTTCTGGAATTGCCTTGCACTTAAAGATTaGACATTATTCCACACCATGCAGAGTCTGTGTTTTGGTCATATG +
Preference number: 1 (lower is better)
Translates to: PSHSTLFWNCLALKD*TLFHTMQSLCFGHM
Trigger: CATATGACCAAAACACAGACTCTGCATGGTGTGGAATAATGTTCAATCTTTAAGTGCAAGGCAATTCCAGAACAGGGTGCTATGGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CCA 90 bp AGTGTTCACATACTTACAAAGAGTGTGGAATGTCTAAGACCAAGATaGGCAAGAACTACCTTACAGGGCTCCCTTAAAGAACCACTGAGT +
Preference number: 1 (lower is better)
Translates to: SVHILTKSVECLRPR*ARTTLQGSLKEPLS
Trigger: ACTCAGTGGTTCTTTAAGGGAGCCCTGTAAGGTAGTTCTTGCCCATCTTGGTCTTAGACATTCCACACTCTTTGTAAGTATGTGAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CCA 90 bp CTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGCACTACTATGTaGTCTAGGCAAAGTAACACAGAGATCCTTGGAATTCACCTGCCA +
Preference number: 1 (lower is better)
Translates to: LSALFLLGVLFCTTM*SRQSNTEILGIHLP
Trigger: TGGCAGGTGAATTCCAAGGATCTCTGTGTTACTTTGCCTAGACCACATAGTAGTGCAAAACAAGACACCCAACAGAAACAAAGCAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR GCA 90 bp CTTGTAGAGGTCAGATTTCAACCTATTACACTGGTCCTGACTTTCTaGTTTGTTTCTGTTGGGTGTCTTGTTTTGCACTACTATGTGGTC +
Preference number: 1 (lower is better)
Translates to: LVEVRFQPITLVLTF*FVSVGCLVLHYYVV
Trigger: GACCACATAGTAGTGCAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGGTTGAAATCTGACCTCTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CCA 90 bp GTGCATGTGTGTATTCAATCTGTGAATATAGGCACCTATGCATCATaGTATGCTTGTAGAGGTCAGATTTCAACCTATTACACTGGTCCT +
Preference number: 1 (lower is better)
Translates to: VHVCIQSVNIGTYAS*YACRGQISTYYTGP
Trigger: AGGACCAGTGTAATAGGTTGAAATCTGACCTCTACAAGCATACCATGATGCATAGGTGCCTATATTCACAGATTGAATACACACATGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CCA 90 bp ATTTCAACCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTaGGTGTCTTGTTTTGCACTACTATGTGGTCTAGGCAAAGTAACA +
Preference number: 1 (lower is better)
Translates to: ISTYYTGPDFLLCFC*VSCFALLCGLGKVT
Trigger: TGTTACTTTGCCTAGACCACATAGTAGTGCAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGGTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGTTTGGCAAAGCACATTaGCAGCATGCCATGACTGAT +
Preference number: 2 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVFGKAH*QHAMTD
Trigger: ATCAGTCATGGCATGCTGTCAATGTGCTTTGCCAAA...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGTTTGGCAAAGCACATTaGCAGCATGCCATGACTGAT +
Preference number: 2 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLFGKAH*QHAMTD
Trigger: ATCAGTCATGGCATGCTGTCAATGTGCTTTGCCAAA...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTTTGGCAAAGCACATTaGCAGCATGCCATGACTGAT +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVFGKAH*QHAMTD
Trigger: ATCAGTCATGGCATGCTGTCAATGTGCTTTGCCAAA...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGCTTGCACTTAAAGATTaGACATTATTCCACACCATG +
Preference number: 2 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVLALKD*TLFHTM
Trigger: CATGGTGTGGAATAATGTTCAATCTTTAAGTGCAAG...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGCATAAGTTCAAAAGCTaGGCTCCAAGTCAAATTGTA +
Preference number: 2 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVHKFKS*APSQIV
Trigger: TACAATTTGACTTGGAGCTCAGCTTTTGAACTTATG...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAGCCCCCAAAACACATaGAGATACCATCTGAACACT +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVSPQNT*RYHLNT
Trigger: AGTGTTCAGATGGTATCTTCATGTGTTTTGGGGGCT...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGAGCCCCCAAAACACATaGAGATACCATCTGAACACT +
Preference number: 2 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLSPQNT*RYHLNT
Trigger: AGTGTTCAGATGGTATCTTCATGTGTTTTGGGGGCT...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR GCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTGGAATTCACCTaGCATCTTCCCATAGGAACT +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVSLEFT*HLPIGT
Trigger: AGTTCCTATGGGAAGATGGCAGGTGAATTCCAAGGA...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR GCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGCTGGTCCTGACTTTCTaGTTTGTTTCTGTTGGGTGT +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVLVLTF*FVSVGC
Trigger: ACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAG...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR GCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGCATTATTCCACACCATaGAGAGTCTGTGTTTTGGTC +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVHYSTP*RVCVLV
Trigger: GACCAAAACACAGACTCTGCATGGTGTGGAATAATG...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR GCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGCATTATTCCACACCATaGAGAGTCTGTGTTTTGGTC +
Preference number: 2 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLHYSTP*RVCVLV
Trigger: GACCAAAACACAGACTCTGCATGGTGTGGAATAATG...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGAATGTTGCCTTTTTCTaGAACCTCCAAAATGGAATA +
Preference number: 2 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVNVAFF*NLQNGI
Trigger: TATTCCATTTTGGAGGTTCCAGAAAAAGGCAACATT...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR GCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGACATTATTCCACACCATaGAGAGTCTGTGTTTTGGTC +
Preference number: 2 (lower is better)
Translates to: TKLKPEISFFYGNNESRGHYSTP*RVCVLV
Trigger: GACCAAAACACAGACTCTGCATGGTGTGGAATAATG...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR GCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGATTTTATGTCCCTTGTaGCTCCTTGCTTTAGCAATC +
Preference number: 2 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLILCPL*LLALAI
Trigger: GATTGCTAAAGCAAGGAGGCACAAGGGACATAAAAT...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGCTTGCACTTAAAGATTaGACATTATTCCACACCATG +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVLALKD*TLFHTM
Trigger: CATGGTGTGGAATAATGTTCAATCTTTAAGTGCAAG...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGCATAAGTTCAAAAGCTaGGCTCCAAGTCAAATTGTA +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVHKFKS*APSQIV
Trigger: TACAATTTGACTTGGAGCTCAGCTTTTGAACTTATG...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR GCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGAATTTTATGTCCCTTGTaGCTCCTTGCTTTAGCAATC +
Preference number: 2 (lower is better)
Translates to: TKLKPEISFFYGNNESRGILCPL*LLALAI
Trigger: GATTGCTAAAGCAAGGAGGCACAAGGGACATAAAAT...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTAGTGACATGTaGATGCTAGGTATATGTACT +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVLCSDM*MLGICT
Trigger: AGTACATATACCTAGCATCCACATGTCACTACACAA...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAATTTGGCAAAGCACATTaGCAGCATGCCATGACTGAT +
Preference number: 2 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKFGKAH*QHAMTD
Trigger: ATCAGTCATGGCATGCTGTCAATGTGCTTTGCCAAA...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTTTTGGCAAAGCACATTaGCAGCATGCCATGACTGAT +
Preference number: 2 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPFGKAH*QHAMTD
Trigger: ATCAGTCATGGCATGCTGTCAATGTGCTTTGCCAAA...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGCTGGAACCTCCAAAATaGAATATATTTTGTGTCTCT +
Preference number: 2 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLLEPPK*NIFCVS
Trigger: AGAGACACAAAATATATTCCATTTTGGAGGTTCCAG...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGCTGGAACCTCCAAAATaGAATATATTTTGTGTCTCT +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVLEPPK*NIFCVS
Trigger: AGAGACACAAAATATATTCCATTTTGGAGGTTCCAG...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAATGTTGCCTTTTTCTaGAACCTCCAAAATGGAATA +
Preference number: 2 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVNVAFF*NLQNGI
Trigger: TATTCCATTTTGGAGGTTCCAGAAAAAGGCAACATT...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTCTTGCACTTAAAGATTaGACATTATTCCACACCATG +
Preference number: 2 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPLALKD*TLFHTM
Trigger: CATGGTGTGGAATAATGTTCAATCTTTAAGTGCAAG...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTGCAGAGTCTGTGTTTTaGTCATATGTTCTGTTTATT +
Preference number: 2 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPAESVF*SYVLFI
Trigger: AATAAACAGAACATATGACCAAAACACAGACTCTGC...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGCAGCGAGTTCATGGTTaGTCTGTATTCCTCAATTGC +
Preference number: 3 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVQRVHG*SVFLNC
Trigger: GCAATTGAGGAATACAGACAAACCATGAACTCGCTG...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGGCATAGAATCTaGAACCTTCTGAAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVVWHRI*NLLKAG
Trigger: GCCAGCTTTCAGAAGGTTCAAGATTCTATGCCACAC...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGGTGTGGCATAGAATCTaGAACCTTCTGAAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLVWHRI*NLLKAG
Trigger: GCCAGCTTTCAGAAGGTTCAAGATTCTATGCCACAC...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGGTCTGTATTCCTCAATaGCTGAAAACAAACAACAGC +
Preference number: 3 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVVCIPQ*LKTNNS
Trigger: GCTGTTGTTTGTTTTCAGCAATTGAGGAATACAGAC...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR GCA 72 bp CTAGGCAAAGTAACACAGAGATCCTTGGAATTCACCTaGCATCTTCCCATAGGAACTTTAGTGGTGAAAGGT +
Preference number: 3 (lower is better)
Translates to: LGKVTQRSLEFT*HLPIGTLVVKG
Trigger: ACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAGGTGAATTCCAAGGATCTCTGTGTTACTTTGCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGTGTTCTGGAATTGCCTaGCACTTAAAGATTGAACAT +
Preference number: 3 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVCSGIA*HLKIEH
Trigger: ATGTTCAATCTTTAAGTGCAAGGCAATTCCAGAACA...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGGTAACACAGAGATCCTaGGAATTCACCTGCCATCTT +
Preference number: 3 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVVTQRS*EFTCHL
Trigger: AAGATGGCAGGTGAATTCCAAGGATCTCTGTGTTAC...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGGTAACACAGAGATCCTaGGAATTCACCTGCCATCTT +
Preference number: 3 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLVTQRS*EFTCHL
Trigger: AAGATGGCAGGTGAATTCCAAGGATCTCTGTGTTAC...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CCA 72 bp TATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTaGGTGTCTTGTTTTGCACTACTATGTGGTCTAGGC +
Preference number: 3 (lower is better)
Translates to: YYTGPDFLLCFC*VSCFALLCGLG
Trigger: GCCTAGACCACATAGTAGTGCAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGGTCTGTATTCCTCAATaGCTGAAAACAAACAACAGC +
Preference number: 3 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVVCIPQ*LKTNNS
Trigger: GCTGTTGTTTGTTTTCAGCAATTGAGGAATACAGAC...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGCTTTATATTTCACATTaGGCAAAGCACATTGACAGC +
Preference number: 3 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLLYISH*AKHIDS
Trigger: GCTGTCAATGTGCTTTGCCAAATGTGAAATATAAAG...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGTGCAGAGTCTGTGTTTaGGTCATATGTTCTGTTTAT +
Preference number: 3 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLCRVCV*VICSVY
Trigger: ATAAACAGAACATATGACCAAAACACAGACTCTGCA...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAGTCTGTGTTTaGGTCATATGTTCTGTTTAT +
Preference number: 3 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVCRVCV*VICSVY
Trigger: ATAAACAGAACATATGACCAAAACACAGACTCTGCA...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGGAATTGCCTaGCACTTAAAGATTGAACAT +
Preference number: 3 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVCSGIA*HLKIEH
Trigger: ATGTTCAATCTTTAAGTGCAAGGCAATTCCAGAACA...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGTGTTCTGGAATTGCCTaGCACTTAAAGATTGAACAT +
Preference number: 3 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLCSGIA*HLKIEH
Trigger: ATGTTCAATCTTTAAGTGCAAGGCAATTCCAGAACA...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTGTGTGGCATAGAATCTaGAACCTTCTGAAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPVWHRI*NLLKAG
Trigger: GCCAGCTTTCAGAAGGTTCAAGATTCTATGCCACAC...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CCA 72 bp TTGTTTCTGTTGGGTGTCTTGTTTTGCACTACTATGTaGTCTAGGCAAAGTAACACAGAGATCCTTGGAATT +
Preference number: 3 (lower is better)
Translates to: LFLLGVLFCTTM*SRQSNTEILGI
Trigger: AATTCCAAGGATCTCTGTGTTACTTTGCCTAGACCACATAGTAGTGCAAAACAAGACACCCAACAGAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGACTTTATATTTCACATTaGGCAAAGCACATTGACAGC +
Preference number: 3 (lower is better)
Translates to: TKLKPEISFFYGNNESRGLYISH*AKHIDS
Trigger: GCTGTCAATGTGCTTTGCCAAATGTGAAATATAAAG...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGATGCAGAGTCTGTGTTTaGGTCATATGTTCTGTTTAT +
Preference number: 3 (lower is better)
Translates to: TKLKPEISFFYGNNESRGCRVCV*VICSVY
Trigger: ATAAACAGAACATATGACCAAAACACAGACTCTGCA...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR GCA 72 bp CACTCTAGCTACTCAATAAGTGCTATTGAGTGCTTATaGATCGTATGTCCCATAAATACACAGATCTATGAC +
Preference number: 3 (lower is better)
Translates to: HSSYSISAIECL*IVCPINTQIYD
Trigger: GTCATAGATCTGTGTATTTATGGGACATACGATGCATAAGCACTCAATAGCACTTATTGAGTAGCTAGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR GCA 72 bp TCTGAACACTCTAGCTACTCAATAAGTGCTATTGAGTaGTTATGCATCGTATGTCCCATAAATACACAGATC +
Preference number: 3 (lower is better)
Translates to: SEHSSYSISAIE*LCIVCPINTQI
Trigger: GATCTGTGTATTTATGGGACATACGATGCATAAGCACTCAATAGCACTTATTGAGTAGCTAGAGTGTTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTCTTTATATTTCACATTaGGCAAAGCACATTGACAGC +
Preference number: 3 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSLYISH*AKHIDS
Trigger: GCTGTCAATGTGCTTTGCCAAATGTGAAATATAAAG...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR GCA 72 bp GCCTTGCACTTAAAGATTGAACATTATTCCACACCATaGAGAGTCTGTGTTTTGGTCATATGTTCTGTTTAT +
Preference number: 3 (lower is better)
Translates to: ALHLKIEHYSTP*RVCVLVICSVY
Trigger: ATAAACAGAACATATGACCAAAACACAGACTCTGCATGGTGTGGAATAATGTTCAATCTTTAAGTGCAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CCA 72 bp TTGAACATTATTCCACACCATGCAGAGTCTGTGTTTTaGTCATATGTTCTGTTTATTCTAGGCTGTAGTTTC +
Preference number: 3 (lower is better)
Translates to: LNIIPHHAESVF*SYVLFILGCSF
Trigger: GAAACTACAGCCTAGAATAAACAGAACATATGACCAAAACACAGACTCTGCATGGTGTGGAATAATGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CCA 72 bp TGTATTCAATCTGTGAATATAGGCACCTATGCATCATaGTATGCTTGTAGAGGTCAGATTTCAACCTATTAC +
Preference number: 3 (lower is better)
Translates to: CIQSVNIGTYAS*YACRGQISTYY
Trigger: GTAATAGGTTGAAATCTGACCTCTACAAGCATACCATGATGCATAGGTGCCTATATTCACAGATTGAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATCTTTATATTTCACATTaGGCAAAGCACATTGACAGC +
Preference number: 3 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHLYISH*AKHIDS
Trigger: GCTGTCAATGTGCTTTGCCAAATGTGAAATATAAAG...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR-3UTR CAA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTCTTTATATTTCACATTaGGCAAAGCACATTGACAGC +
Preference number: 3 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPLYISH*AKHIDS
Trigger: GCTGTCAATGTGCTTTGCCAAATGTGAAATATAAAG...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR TCA 72 bp ATGTCCCTTGTGCCTCCTTGCTTTAGCAATCTAGAGTaGCTTATATTTGATTGGCTTATTAAACTTCTTAGT +
Preference number: 3 (lower is better)
Translates to: MSLVPPCFSNLE*LIFDWLIKLLS
Trigger: ACTAAGAAGTTTAATAAGCCAATCAAATATAAGTCACTCTAGATTGCTAAAGCAAGGAGGCACAAGGGACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR GCA 72 bp ATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTaGCCAACTGCCTCAGAAACAGTAATGCTTCCAAAG +
Preference number: 3 (lower is better)
Translates to: IFDWLIKLLSRV*PTASETVMLPK
Trigger: CTTTGGAAGCATTACTGTTTCTGAGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGGCACAAAGAAGCTCATaGGCATCAGGAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVAQRSS*ASGGSG
Trigger: CCCAGACCCTCCTGATGCTCATGAGCTTCTTTGTGC...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGGGACACTCAACATGCTaGTGGTACAAAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVGHSTC*WYKGRD
Trigger: GTCTCTCCCTTTGTACCACCAGCATGTTGAGTGTCC...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGGGTAGCTCTTTGCTTTaGGGATGTTTTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVGSSLL*GCFGGK
Trigger: CTTTCCCCCAAAACATCCCCAAAGCAAAGAGCTACC...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGCTGGACCTGTGCCCATaGATGAACTTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLLDLCP*MNLRMW
Trigger: CCACATCCTCAAGTTCATTCATGGGCACAGGTCCAG...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGCTGGACCTGTGCCCATaGATGAACTTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVLDLCP*MNLRMW
Trigger: CCACATCCTCAAGTTCATTCATGGGCACAGGTCCAG...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGAATTTGGGGTGGCAATaGTGGATACCAAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVNLGWQ*WIPRVD
Trigger: GTCAACTCTTGGTATCCATCATTGCCACCCCAAATT...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGTTTTGGGGGAAAGGCTaGTACCTTGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLFWGKG*YLADAG
Trigger: CCCAGCATCTGCAAGGTATCAGCCTTTCCCCCAAAA...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGGGGGAAAGGCTaGTACCTTGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVFWGKG*YLADAG
Trigger: CCCAGCATCTGCAAGGTATCAGCCTTTCCCCCAAAA...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGGAAAGGCTGATACCTTaGAGATGCTGGGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVERLIP*RCWVFF
Trigger: GAAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTC...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGCTGAGGATGATGGCCTaGAGGACACTCAACATGCTG +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVLRMMA*RTLNML
Trigger: CAGCATGTTGAGTGTCCTCCAGGCCATCATCCTCAG...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAGCATCAGGAGGGTCTaGGTAGCTCTTTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVSIRRV*VALCFG
Trigger: CCCAAAGCAAAGAGCTACCCAGACCCTCCTGATGCT...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGAGCATCAGGAGGGTCTaGGTAGCTCTTTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLSIRRV*VALCFG
Trigger: CCCAAAGCAAAGAGCTACCCAGACCCTCCTGATGCT...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGACTGGACCTGTGCCCATaGATGAACTTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGLDLCP*MNLRMW
Trigger: CCACATCCTCAAGTTCATTCATGGGCACAGGTCCAG...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAGCACAAAGAAGCTCATaGGCATCAGGAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFAAQRSS*ASGGSG
Trigger: CCCAGACCCTCCTGATGCTCATGAGCTTCTTTGTGC...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTGCACAAAGAAGCTCATaGGCATCAGGAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSAQRSS*ASGGSG
Trigger: CCCAGACCCTCCTGATGCTCATGAGCTTCTTTGTGC...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGGGACACTCAACATGCTaGTGGTACAAAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVGHSTC*WYKGRD
Trigger: GTCTCTCCCTTTGTACCACCAGCATGTTGAGTGTCC...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGACTGAGGATGATGGCCTaGAGGACACTCAACATGCTG +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGLRMMA*RTLNML
Trigger: CAGCATGTTGAGTGTCCTCCAGGCCATCATCCTCAG...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CAA 72 bp GGGTTCCATCCCATAGCACCCTGTTCTGGAATTGCCTaGCACTTAAAGATTGAACATTATTCCACACCATGC +
Preference number: 4 (lower is better)
Translates to: GFHPIAPCSGIA*HLKIEHYSTPC
Trigger: GCATGGTGTGGAATAATGTTCAATCTTTAAGTGCAAGGCAATTCCAGAACAGGGTGCTATGGGATGGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACTGGACCTGTGCCCATaGATGAACTTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFALDLCP*MNLRMW
Trigger: CCACATCCTCAAGTTCATTCATGGGCACAGGTCCAG...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTCTGGACCTGTGCCCATaGATGAACTTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSLDLCP*MNLRMW
Trigger: CCACATCCTCAAGTTCATTCATGGGCACAGGTCCAG...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGTACCATGTACCAAGTTaGGAGAACCATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVYHVPS*ENHETN
Trigger: ATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTA...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTTTTGGGGGAAAGGCTaGTACCTTGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSFWGKG*YLADAG
Trigger: CCCAGCATCTGCAAGGTATCAGCCTTTCCCCCAAAA...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCATTTTGGGGGAAAGGCTaGTACCTTGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFAFWGKG*YLADAG
Trigger: CCCAGCATCTGCAAGGTATCAGCCTTTCCCCCAAAA...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATGCACAAAGAAGCTCATaGGCATCAGGAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHAQRSS*ASGGSG
Trigger: CCCAGACCCTCCTGATGCTCATGAGCTTCTTTGTGC...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGAGGACACTCAACATGCTaGTGGTACAAAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGGHSTC*WYKGRD
Trigger: GTCTCTCCCTTTGTACCACCAGCATGTTGAGTGTCC...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTCTGAGGATGATGGCCTaGAGGACACTCAACATGCTG +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSLRMMA*RTLNML
Trigger: CAGCATGTTGAGTGTCCTCCAGGCCATCATCCTCAG...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACTGAGGATGATGGCCTaGAGGACACTCAACATGCTG +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFALRMMA*RTLNML
Trigger: CAGCATGTTGAGTGTCCTCCAGGCCATCATCCTCAG...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGCACTCAGGAAAAGAATaGCACATGAGATATGATGGA +
Preference number: 4 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVHSGKE*HMRYDG
Trigger: TCCATCATATCTCATGTGCCATTCTTTTCCTGAGTG...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGGGTAGCTCTTTGCTTTaGGGATGTTTTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLGSSLL*GCFGGK
Trigger: CTTTCCCCCAAAACATCCCCAAAGCAAAGAGCTACC...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGGGTAGCTCTTTGCTTTaGGGATGTTTTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVGSSLL*GCFGGK
Trigger: CTTTCCCCCAAAACATCCCCAAAGCAAAGAGCTACC...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAAGCATCAGGAGGGTCTaGGTAGCTCTTTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFASIRRV*VALCFG
Trigger: CCCAAAGCAAAGAGCTACCCAGACCCTCCTGATGCT...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTAGCATCAGGAGGGTCTaGGTAGCTCTTTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSSIRRV*VALCFG
Trigger: CCCAAAGCAAAGAGCTACCCAGACCCTCCTGATGCT...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAACAGTGGCTaGGGAGAAAAGAACAGAATC +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVCENSG*GEKNRI
Trigger: GATTCTGTTCTTTTCTCCTCAGCCACTGTTCTCACA...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGCTCATTCATCATATGTaGGAACAGTGGCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLLIHHM*EQWLRR
Trigger: TCTCCTCAGCCACTGTTCTCACATATGATGAATGAG...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAAGGAAGCTATTGCCTaGGATCCCAATGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVKEAIA*DPNANF
Trigger: GAAATTGGCATTGGGATCTCAGGCAATAGCTTCCTT...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATCTGGACCTGTGCCCATaGATGAACTTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHLDLCP*MNLRMW
Trigger: CCACATCCTCAAGTTCATTCATGGGCACAGGTCCAG...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGGGAGAGATTTACGCTTaGACTTTGCTAAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLGEIYA*TLLNRS
Trigger: GCTCCTGTTTAGCAAAGTTCAAGCGTAAATCTCTCC...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGAATTTGGGGTGGCAATaGTGGATACCAAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLNLGWQ*WIPRVD
Trigger: GTCAACTCTTGGTATCCATCATTGCCACCCCAAATT...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATTTTTGGGGGAAAGGCTaGTACCTTGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHFWGKG*YLADAG
Trigger: CCCAGCATCTGCAAGGTATCAGCCTTTCCCCCAAAA...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCACAAAGAAGCTCATaGGCATCAGGAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKAQRSS*ASGGSG
Trigger: CCCAGACCCTCCTGATGCTCATGAGCTTCTTTGTGC...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTGCACAAAGAAGCTCATaGGCATCAGGAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPAQRSS*ASGGSG
Trigger: CCCAGACCCTCCTGATGCTCATGAGCTTCTTTGTGC...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGAATGAGTGTGTACCCTaGTGTTCTCATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVNECVP*CSHSSY
Trigger: ATATGATGAATGAGAACAGCAGGGTACACACTCATT...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGGAAAGGCTGATACCTTaGAGATGCTGGGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLERLIP*RCWVFF
Trigger: GAAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTC...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTGGACACTCAACATGCTaGTGGTACAAAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSGHSTC*WYKGRD
Trigger: GTCTCTCCCTTTGTACCACCAGCATGTTGAGTGTCC...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATAGCATCAGGAGGGTCTaGGTAGCTCTTTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHSIRRV*VALCFG
Trigger: CCCAAAGCAAAGAGCTACCCAGACCCTCCTGATGCT...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CAA 72 bp CTACTATGTGGTCTAGGCAAAGTAACACAGAGATCCTaGGAATTCACCTGCCATCTTCCCATAGGAACTTTA +
Preference number: 4 (lower is better)
Translates to: LLCGLGKVTQRS*EFTCHLPIGTL
Trigger: TAAAGTTCCTATGGGAAGATGGCAGGTGAATTCCAAGGATCTCTGTGTTACTTTGCCTAGACCACATAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGATGTGAGAACAGTGGCTaGGGAGAAAAGAACAGAATC +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGCENSG*GEKNRI
Trigger: GATTCTGTTCTTTTCTCCTCAGCCACTGTTCTCACA...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGACTCATTCATCATATGTaGGAACAGTGGCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGLIHHM*EQWLRR
Trigger: TCTCCTCAGCCACTGTTCTCACATATGATGAATGAG...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGAGGAGAGATTTACGCTTaGACTTTGCTAAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGGEIYA*TLLNRS
Trigger: GCTCCTGTTTAGCAAAGTTCAAGCGTAAATCTCTCC...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGAAATTTGGGGTGGCAATaGTGGATACCAAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGNLGWQ*WIPRVD
Trigger: GTCAACTCTTGGTATCCATCATTGCCACCCCAAATT...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTTTTTGGGGGAAAGGCTaGTACCTTGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPFWGKG*YLADAG
Trigger: CCCAGCATCTGCAAGGTATCAGCCTTTCCCCCAAAA...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATGGACACTCAACATGCTaGTGGTACAAAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHGHSTC*WYKGRD
Trigger: GTCTCTCCCTTTGTACCACCAGCATGTTGAGTGTCC...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTCTGAGGATGATGGCCTaGAGGACACTCAACATGCTG +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPLRMMA*RTLNML
Trigger: CAGCATGTTGAGTGTCCTCCAGGCCATCATCCTCAG...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAACTGAGGATGATGGCCTaGAGGACACTCAACATGCTG +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKLRMMA*RTLNML
Trigger: CAGCATGTTGAGTGTCCTCCAGGCCATCATCCTCAG...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAGGTAGCTCTTTGCTTTaGGGATGTTTTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFAGSSLL*GCFGGK
Trigger: CTTTCCCCCAAAACATCCCCAAAGCAAAGAGCTACC...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAAGCATCAGGAGGGTCTaGGTAGCTCTTTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKSIRRV*VALCFG
Trigger: CCCAAAGCAAAGAGCTACCCAGACCCTCCTGATGCT...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTGTGAGAACAGTGGCTaGGGAGAAAAGAACAGAATC +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSCENSG*GEKNRI
Trigger: GATTCTGTTCTTTTCTCCTCAGCCACTGTTCTCACA...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTCTCATTCATCATATGTaGGAACAGTGGCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSLIHHM*EQWLRR
Trigger: TCTCCTCAGCCACTGTTCTCACATATGATGAATGAG...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACTCATTCATCATATGTaGGAACAGTGGCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFALIHHM*EQWLRR
Trigger: TCTCCTCAGCCACTGTTCTCACATATGATGAATGAG...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTAAGGAAGCTATTGCCTaGGATCCCAATGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSKEAIA*DPNANF
Trigger: GAAATTGGCATTGGGATCTCAGGCAATAGCTTCCTT...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAAAGGAAGCTATTGCCTaGGATCCCAATGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFAKEAIA*DPNANF
Trigger: GAAATTGGCATTGGGATCTCAGGCAATAGCTTCCTT...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTCAAGGAATTTACATATaGTGTCATCCCAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSQGIYI*CHPNPS
Trigger: GGAGGGGTTGGGATGACATCATATGTAAATTCCTTG...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAGGAGAGATTTACGCTTaGACTTTGCTAAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFAGEIYA*TLLNRS
Trigger: GCTCCTGTTTAGCAAAGTTCAAGCGTAAATCTCTCC...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAAATTTGGGGTGGCAATaGTGGATACCAAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFANLGWQ*WIPRVD
Trigger: GTCAACTCTTGGTATCCATCATTGCCACCCCAAATT...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGTACCATGTACCAAGTTaGGAGAACCATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLYHVPS*ENHETN
Trigger: ATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTA...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAGAAAGGCTGATACCTTaGAGATGCTGGGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFAERLIP*RCWVFF
Trigger: GAAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTC...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTGAAAGGCTGATACCTTaGAGATGCTGGGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSERLIP*RCWVFF
Trigger: GAAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTC...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGCACTCAGGAAAAGAATaGCACATGAGATATGATGGA +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVHSGKE*HMRYDG
Trigger: TCCATCATATCTCATGTGCCATTCTTTTCCTGAGTG...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGCACTCAGGAAAAGAATaGCACATGAGATATGATGGA +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLHSGKE*HMRYDG
Trigger: TCCATCATATCTCATGTGCCATTCTTTTCCTGAGTG...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATGGTAGCTCTTTGCTTTaGGGATGTTTTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHGSSLL*GCFGGK
Trigger: CTTTCCCCCAAAACATCCCCAAAGCAAAGAGCTACC...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATTGTGAGAACAGTGGCTaGGGAGAAAAGAACAGAATC +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHCENSG*GEKNRI
Trigger: GATTCTGTTCTTTTCTCCTCAGCCACTGTTCTCACA...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATCTCATTCATCATATGTaGGAACAGTGGCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHLIHHM*EQWLRR
Trigger: TCTCCTCAGCCACTGTTCTCACATATGATGAATGAG...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATAAGGAAGCTATTGCCTaGGATCCCAATGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHKEAIA*DPNANF
Trigger: GAAATTGGCATTGGGATCTCAGGCAATAGCTTCCTT...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATCAAGGAATTTACATATaGTGTCATCCCAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHQGIYI*CHPNPS
Trigger: GGAGGGGTTGGGATGACATCATATGTAAATTCCTTG...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATGGAGAGATTTACGCTTaGACTTTGCTAAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHGEIYA*TLLNRS
Trigger: GCTCCTGTTTAGCAAAGTTCAAGCGTAAATCTCTCC...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGGAAAAGAATGGCACATaGGATATGATGGAGAGATTT +
Preference number: 4 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLEKNGT*DMMERF
Trigger: AAATCTCTCCATCATATCTCATGTGCCATTCTTTTC...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGGAAAAGAATGGCACATaGGATATGATGGAGAGATTT +
Preference number: 4 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVEKNGT*DMMERF
Trigger: AAATCTCTCCATCATATCTCATGTGCCATTCTTTTC...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATAATTTGGGGTGGCAATaGTGGATACCAAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHNLGWQ*WIPRVD
Trigger: GTCAACTCTTGGTATCCATCATTGCCACCCCAAATT...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGATACCATGTACCAAGTTaGGAGAACCATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGYHVPS*ENHETN
Trigger: ATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTA...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCATGCCTGAGATCCCAATaGCAATTTCGGAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFACLRSQ*QFRRKR
Trigger: TCTTTTTCTCCGAAATTGGCATTGGGATCTCAGGCA...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATGAAAGGCTGATACCTTaGAGATGCTGGGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHERLIP*RCWVFF
Trigger: GAAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTC...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGACACTCAGGAAAAGAATaGCACATGAGATATGATGGA +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGHSGKE*HMRYDG
Trigger: TCCATCATATCTCATGTGCCATTCTTTTCCTGAGTG...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGGTAGCTCTTTGCTTTaGGGATGTTTTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKGSSLL*GCFGGK
Trigger: CTTTCCCCCAAAACATCCCCAAAGCAAAGAGCTACC...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTTGTGAGAACAGTGGCTaGGGAGAAAAGAACAGAATC +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPCENSG*GEKNRI
Trigger: GATTCTGTTCTTTTCTCCTCAGCCACTGTTCTCACA...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAAAGGAAGCTATTGCCTaGGATCCCAATGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKKEAIA*DPNANF
Trigger: GAAATTGGCATTGGGATCTCAGGCAATAGCTTCCTT...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTAAGGAAGCTATTGCCTaGGATCCCAATGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPKEAIA*DPNANF
Trigger: GAAATTGGCATTGGGATCTCAGGCAATAGCTTCCTT...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTCAAGGAATTTACATATaGTGTCATCCCAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPQGIYI*CHPNPS
Trigger: GGAGGGGTTGGGATGACATCATATGTAAATTCCTTG...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAACAAGGAATTTACATATaGTGTCATCCCAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKQGIYI*CHPNPS
Trigger: GGAGGGGTTGGGATGACATCATATGTAAATTCCTTG...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGGAGAGATTTACGCTTaGACTTTGCTAAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKGEIYA*TLLNRS
Trigger: GCTCCTGTTTAGCAAAGTTCAAGCGTAAATCTCTCC...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTGGAGAGATTTACGCTTaGACTTTGCTAAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPGEIYA*TLLNRS
Trigger: GCTCCTGTTTAGCAAAGTTCAAGCGTAAATCTCTCC...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGAGAAAAGAATGGCACATaGGATATGATGGAGAGATTT +
Preference number: 4 (lower is better)
Translates to: TKLKPEISFFYGNNESRGEKNGT*DMMERF
Trigger: AAATCTCTCCATCATATCTCATGTGCCATTCTTTTC...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAAATTTGGGGTGGCAATaGTGGATACCAAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKNLGWQ*WIPRVD
Trigger: GTCAACTCTTGGTATCCATCATTGCCACCCCAAATT...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTAATTTGGGGTGGCAATaGTGGATACCAAGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPNLGWQ*WIPRVD
Trigger: GTCAACTCTTGGTATCCATCATTGCCACCCCAAATT...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTACCATGTACCAAGTTaGGAGAACCATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSYHVPS*ENHETN
Trigger: ATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTA...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCATACCATGTACCAAGTTaGGAGAACCATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFAYHVPS*ENHETN
Trigger: ATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTA...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGAAAGGCTGATACCTTaGAGATGCTGGGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKERLIP*RCWVFF
Trigger: GAAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTC...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTGAAAGGCTGATACCTTaGAGATGCTGGGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPERLIP*RCWVFF
Trigger: GAAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTC...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTCACTCAGGAAAAGAATaGCACATGAGATATGATGGA +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSHSGKE*HMRYDG
Trigger: TCCATCATATCTCATGTGCCATTCTTTTCCTGAGTG...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACACTCAGGAAAAGAATaGCACATGAGATATGATGGA +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFAHSGKE*HMRYDG
Trigger: TCCATCATATCTCATGTGCCATTCTTTTCCTGAGTG...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAGAAAAGAATGGCACATaGGATATGATGGAGAGATTT +
Preference number: 4 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFAEKNGT*DMMERF
Trigger: AAATCTCTCCATCATATCTCATGTGCCATTCTTTTC...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATTACCATGTACCAAGTTaGGAGAACCATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHYHVPS*ENHETN
Trigger: ATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTA...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTAATGAGTGTGTACCCTaGTGTTCTCATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSNECVP*CSHSSY
Trigger: ATATGATGAATGAGAACAGCAGGGTACACACTCATT...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATGAAAAGAATGGCACATaGGATATGATGGAGAGATTT +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHEKNGT*DMMERF
Trigger: AAATCTCTCCATCATATCTCATGTGCCATTCTTTTC...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTTACCATGTACCAAGTTaGGAGAACCATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPYHVPS*ENHETN
Trigger: ATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTA...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAATACCATGTACCAAGTTaGGAGAACCATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKYHVPS*ENHETN
Trigger: ATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTA...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATAATGAGTGTGTACCCTaGTGTTCTCATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHNECVP*CSHSSY
Trigger: ATATGATGAATGAGAACAGCAGGGTACACACTCATT...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAACACTCAGGAAAAGAATaGCACATGAGATATGATGGA +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKHSGKE*HMRYDG
Trigger: TCCATCATATCTCATGTGCCATTCTTTTCCTGAGTG...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR TCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGAAAAGAATGGCACATaGGATATGATGGAGAGATTT +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKEKNGT*DMMERF
Trigger: AAATCTCTCCATCATATCTCATGTGCCATTCTTTTC...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR GCA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAAATGAGTGTGTACCCTaGTGTTCTCATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKNECVP*CSHSSY
Trigger: ATATGATGAATGAGAACAGCAGGGTACACACTCATT...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
3UTR CAA 72 bp TCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTaGAAAGCTACGTGTGTAATTCATTTTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSYCVPFAHSSV*KATCVIHFLSG
Trigger: TCCAGAAAGAAAATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS GCA 90 bp TTGGGGGAAAGGCTGATACCTTGCAGATGCTGGGTCTTTTTCCTGTaGCTACACAAGAGGGCTACCATGTACCAAGTTGAGAGAACCATG +
Preference number: 5 (lower is better)
Translates to: LGERLIPCRCWVFFL*LHKRATMYQVERTM
Trigger: CATGGTTCTCTCAACTTGGTACATGGTAGCCCTCTTGTGTAGGCACAGGAAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTCCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS CCA 90 bp AAAATGTCTGTGGCTATGAATGCCATGACCAGTAGCATTAGTAGGTaGATTAGGGACAAGAGACCAATGGGCAGGTCAGAGAGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: KMSVAMNAMTSSISR*IRDKRPMGRSESLD
Trigger: GTCCAGACTCTCTGACCTGCCCATTGGTCTCTTGTCCCTAATCCACCTACTAATGCTACTGGTCATGGCATTCATAGCCACAGACATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGAGAAGAAGGAAGCTATaGCCTGAGATCCCAATGCCA +
Preference number: 5 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVRRRKL*PEIPMP
Trigger: TGGCATTGGGATCTCAGGCAATAGCTTCCTTCTTCT...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGGGAAAGGCTGATACCTaGCAGATGCTGGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVGKADT*QMLGLF
Trigger: AAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTCC...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS TCA 90 bp GGTCTTTTTCCTGTGCCTACACAAGAGGGCTACCATGTACCAAGTTaGGAGAACCATGAGACTAATAAGAAAGACATCCCTGATGACCAG +
Preference number: 5 (lower is better)
Translates to: GLFPVPTQEGYHVPS*ENHETNKKDIPDDQ
Trigger: CTGGTCATCAGGGATGTCTTTCTTATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTAGCCCTCTTGTGTAGGCACAGGAAAAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp CTGCCATCTTCCCATAGGAACTTTAGTGGTGAAAGGTGCCTGGTACTCATTGTGAGTAGAAAACATGCTTaGCATGACGTAACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: LPSSHRNFSGERCLVLIVSRKHA*HDVTQG
Trigger: CCCTTGAGTTACGTCATGCAAAGCATGTTTTCTACT...CACAATGAGTACCAGGCACCTTTCACCACTAAAGTTCCTATGGGAAGATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp GGGGGAAATTATTTAAATGTGTGTGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTGGGGATGTTTaGGGGGAAAGGCTGATACCT +
Preference number: 5 (lower is better)
Translates to: GGNYLNVCVMCVCVCVCVCFGDV*GERLIP
Trigger: AGGTATCAGCCTTTCCCCCAAAACATCCCCAAAGCA...CACACACACACACACACACACACACATCACACACACATTTAAATAATTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp CCTATTACACTGGTCCTGACTTTCTGCTTTGTTTCTGTTGGGTGTCTTGTTTTGGGAAAGGCTGATACCTaGCAGATGCTGGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: PITLVLTFCFVSVGCLVLGKADT*QMLGLF
Trigger: AAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTCC...CAAAACAAGACACCCAACAGAAACAAAGCAGAAAGTCAGGACCAGTGTAATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGATGCTTTGGGGATGTTTaGGGGGAAAGGCTGATACCT +
Preference number: 5 (lower is better)
Translates to: TKLKPEISFFYGNNESRGCFGDV*GERLIP
Trigger: AGGTATCAGCCTTTCCCCCAAAACATCCCCAAAGCA...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS TCA 90 bp GTGTGTACCCTGCTGTTCTCATTCATCATATGTGAGAACAGTGGCTaGGGAGAAAAGAACAGAATCTCATTCATAACTCCTGGCAACTCT +
Preference number: 5 (lower is better)
Translates to: VCTLLFSFIICENSG*GEKNRISFITPGNS
Trigger: AGAGTTGCCAGGAGTTATGAATGAGATTCTGTTCTTTTCTCCTCAGCCACTGTTCTCACATATGATGAATGAGAACAGCAGGGTACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGAGGAAAGGCTGATACCTaGCAGATGCTGGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: TKLKPEISFFYGNNESRGGKADT*QMLGLF
Trigger: AAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTCC...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCATGCTTTGGGGATGTTTaGGGGGAAAGGCTGATACCT +
Preference number: 5 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFACFGDV*GERLIP
Trigger: AGGTATCAGCCTTTCCCCCAAAACATCCCCAAAGCA...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTGCTTTGGGGATGTTTaGGGGGAAAGGCTGATACCT +
Preference number: 5 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSCFGDV*GERLIP
Trigger: AGGTATCAGCCTTTCCCCCAAAACATCCCCAAAGCA...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAAGAAGAAGGAAGCTATaGCCTGAGATCCCAATGCCA +
Preference number: 5 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFARRRKL*PEIPMP
Trigger: TGGCATTGGGATCTCAGGCAATAGCTTCCTTCTTCT...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTGGAAAGGCTGATACCTaGCAGATGCTGGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSGKADT*QMLGLF
Trigger: AAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTCC...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATAGAAGAAGGAAGCTATaGCCTGAGATCCCAATGCCA +
Preference number: 5 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHRRRKL*PEIPMP
Trigger: TGGCATTGGGATCTCAGGCAATAGCTTCCTTCTTCT...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp ACCAAGCTGAAGCCAGAAATCAGCTTCTTCTATGGAAATAATGAATCCAGAGGAAGTAGAAAACATGCTTaGCATGACGTAACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: TKLKPEISFFYGNNESRGSRKHA*HDVTQG
Trigger: CCCTTGAGTTACGTCATGCAAAGCATGTTTTCTACT...TCCTCTGGATTCATTATTTCCATAGAAGAAGCTGATTTCTGGCTTCAGCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTTGCTTTGGGGATGTTTaGGGGGAAAGGCTGATACCT +
Preference number: 5 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPCFGDV*GERLIP
Trigger: AGGTATCAGCCTTTCCCCCAAAACATCCCCAAAGCA...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAATGCTTTGGGGATGTTTaGGGGGAAAGGCTGATACCT +
Preference number: 5 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKCFGDV*GERLIP
Trigger: AGGTATCAGCCTTTCCCCCAAAACATCCCCAAAGCA...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS TCA 90 bp ATCCCAATGCCAATTTCGGAGAAAAAGATGTGCCTTAAGTTAGAATaGGTGTGTACCCTGCTGTTCTCATTCATCATATGTGAGAACAGT +
Preference number: 5 (lower is better)
Translates to: IPMPISEKKMCLKLE*VCTLLFSFIICENS
Trigger: ACTGTTCTCACATATGATGAATGAGAACAGCAGGGTACACACTCATTCTAACTTAAGGCACATCTTTTTCTCCGAAATTGGCATTGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTAGAAGAAGGAAGCTATaGCCTGAGATCCCAATGCCA +
Preference number: 5 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPRRRKL*PEIPMP
Trigger: TGGCATTGGGATCTCAGGCAATAGCTTCCTTCTTCT...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAAGAAGAAGGAAGCTATaGCCTGAGATCCCAATGCCA +
Preference number: 5 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKRRRKL*PEIPMP
Trigger: TGGCATTGGGATCTCAGGCAATAGCTTCCTTCTTCT...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp GAAACATGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCAAGTAGAAAACATGCTTaGCATGACGTAACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: ETWFKEKCCCSSYCVPFASRKHA*HDVTQG
Trigger: CCCTTGAGTTACGTCATGCAAAGCATGTTTTCTACT...TGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCATGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp TGGTTTAAGGAGAAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTAGTAGAAAACATGCTTaGCATGACGTAACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: WFKEKCCCSSYCVPFAHSSRKHA*HDVTQG
Trigger: CCCTTGAGTTACGTCATGCAAAGCATGTTTTCTACT...ACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTTCTCCTTAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp GACTTATATTTGATTGGCTTATTAAACTTCTTAGTAGAGTTTGCCCAACTGCCTGGAAAGGCTGATACCTaGCAGATGCTGGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: DLYLIGLLNFLVEFAQLPGKADT*QMLGLF
Trigger: AAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTCC...AGGCAGTTGGGCAAACTCTACTAAGAAGTTTAATAAGCCAATCAAATATAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp AAATGTTGCTGTTCAAGTTACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGGAAAGGCTGATACCTaGCAGATGCTGGGTCTTTTT +
Preference number: 5 (lower is better)
Translates to: KCCCSSYCVPFAHSSVLKGKADT*QMLGLF
Trigger: AAAAAGACCCAGCATCTGCAAGGTATCAGCCTTTCC...TTTCAAAACAGAACTATGTGCAAAAGGCACACAGTAACTTGAACAGCAACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS-3UTR CAA 90 bp TACTGTGTGCCTTTTGCACATAGTTCTGTTTTGAAAGCTACGTGTGTAATTCATAGTAGAAAACATGCTTaGCATGACGTAACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: YCVPFAHSSVLKATCVIHSRKHA*HDVTQG
Trigger: CCCTTGAGTTACGTCATGCAAAGCATGTTTTCTACT...ATGAATTACACACGTAGCTTTCAAAACAGAACTATGTGCAAAAGGCACACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS CCA 72 bp GTGGCTATGAATGCCATGACCAGTAGCATTAGTAGGTaGATTAGGGACAAGAGACCAATGGGCAGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: VAMNAMTSSISR*IRDKRPMGRSE
Trigger: CTCTGACCTGCCCATTGGTCTCTTGTCCCTAATCCACCTACTAATGCTACTGGTCATGGCATTCATAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS TCA 72 bp CCTGTGCCTACACAAGAGGGCTACCATGTACCAAGTTaGGAGAACCATGAGACTAATAAGAAAGACATCCCT +
Preference number: 6 (lower is better)
Translates to: PVPTQEGYHVPS*ENHETNKKDIP
Trigger: AGGGATGTCTTTCTTATTAGTCTCATGGTTCTCTCAACTTGGTACATGGTAGCCCTCTTGTGTAGGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS TCA 72 bp CCAATTTCGGAGAAAAAGATGTGCCTTAAGTTAGAATaGGTGTGTACCCTGCTGTTCTCATTCATCATATGT +
Preference number: 6 (lower is better)
Translates to: PISEKKMCLKLE*VCTLLFSFIIC
Trigger: ACATATGATGAATGAGAACAGCAGGGTACACACTCATTCTAACTTAAGGCACATCTTTTTCTCCGAAATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2
CDS TCA 72 bp ATTGTAAGATGTTGGATCATTCAGGAACATAGTTCTTaGGCAGGAGACAATAGTGTCATAGATGGTCATCAG +
Preference number: 6 (lower is better)
Translates to: IVRCWIIQEHSS*AGDNSVIDGHQ
Trigger: CTGATGACCATCTATGACACTATTGTCTCCTGCTCAAGAACTATGTTCCTGAATGATCCAACATCTTACAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000072859.6
ENSMUST00000174204.3
ENSMUST00000226542.2
ENSMUST00000226977.2
ENSMUST00000227109.2
ENSMUST00000227766.2
ENSMUST00000227876.2
ENSMUST00000227911.2
ENSMUST00000228880.2