Pregenerated sensors for VMN1R47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060724Ensembl transcript IDs: ENSMUST00000074881.2, ENSMUST00000227229.2, ENSMUST00000227811.2, ENSMUST00000228680.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGGTTTTAACTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTaGGTTCATTTCTGGGTCCTCAACTCCACTCCACTGGTCTACCTG | + |
|
Preference number: 1 (lower is better) Translates to: DGFNSLVKDQATTGM*VHFWVLNSTPLVYL Trigger: CAGGTAGACCAGTGGAGTGGAGTTGAGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAGTTAAAACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR TCA 90 bp | GTGCTGGCAGAACCCCAGCAGGAGCTTTCCTTTTCCTGTAGAGACTaGGAACAAGATTCATATGAGCAAAGAGTGGTATTCAAGTCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: VLAEPQQELSFSCRD*EQDSYEQRVVFKSL Trigger: CAGAGACTTGAATACCACTCTTTGCTCATATGAATCTTGTTCTCAGTCTCTACAGGAAAAGGAAAGCTCCTGCTGGGGTTCTGCCAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR TCA 90 bp | TTGAAAGTCAGGTGTCTTTTGCCTTACAGAAGCTCTGCAGATTCATaGGGTCCCATCTGTCAATTCTCGATCTTACAGCACAAGCCATTG | + |
|
Preference number: 1 (lower is better) Translates to: LKVRCLLPYRSSADS*GPICQFSILQHKPL Trigger: CAATGGCTTGTGCTGTAAGATCGAGAATTGACAGATGGGACCTCATGAATCTGCAGAGCTTCTGTAAGGCAAAAGACACCTGACTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR TCA 90 bp | CCATCCCTCAGCCCCCTATCCTGGCACTGCTTTCCACTTAATGATTaGACACTATCCCATACCATGCATAGATTGTGTTTTAATAATATG | + |
|
Preference number: 1 (lower is better) Translates to: PSLSPLSWHCFPLND*TLSHTMHRLCFNNM Trigger: CATATTATTAAAACACAATCTATGCATGGTATGGGATAGTGTTCAATCATTAAGTGGAAAGCAGTGCCAGGATAGGGGGCTGAGGGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR GCA 90 bp | CATGGTGATTCCACCAGAGGTTCTTCTATCCTTGAGAAGAGTCTTTaGTATCCTAGGTTTTCTGCCATTCCAGATGAATTTACAGATTGC | + |
|
Preference number: 1 (lower is better) Translates to: HGDSTRGSSILEKSL*YPRFSAIPDEFTDC Trigger: GCAATCTGTAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGATAGAAGAACCTCTGGTGGAATCACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 90 bp | ATGAGAATGAAGTGCCCCTCCTTGTCTCTTTTGATGACTTTGGGTTaGAAGTCAATCTTATCAGATATTAGGATGGCTACTCCAGCTTGT | + |
|
Preference number: 1 (lower is better) Translates to: MRMKCPSLSLLMTLG*KSILSDIRMATPAC Trigger: ACAAGCTGGAGTAGCCATCCTAATATCTGATAAGATTGACTTCCAACCCAAAGTCATCAAAAGAGACAAGGAGGGGCACTTCATTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 90 bp | ATAGTGGGAGACTTCAACACACCACTTTCACCAATGGACAGATCATaGAAACAGAAACTAAACAGGGACACAATGAAACTAACAGAAGTG | + |
|
Preference number: 1 (lower is better) Translates to: IVGDFNTPLSPMDRS*KQKLNRDTMKLTEV Trigger: CACTTCTGTTAGTTTCATTGTGTCCCTGTTTAGTTTCTGTTTCCATGATCTGTCCATTGGTGAAAGTGGTGTGTTGAAGTCTCCCACTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 90 bp | TGTTGGCAAGATAGCCATTTTTACAATGTTGATCCTGCCAATCCATaGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTC | + |
|
Preference number: 1 (lower is better) Translates to: CWQDSHFYNVDPANP*AWEIFPSSEIFFNF Trigger: GAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 90 bp | CCTTTTCCTGTAGAGACTGAGAACAAGATTCATATGAGCAAAGAGTaGTATTCAAGTCTCTGTGTGGTACACATTTGTCACAATGGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: PFPVETENKIHMSKE*YSSLCVVHICHNGL Trigger: TAAACCATTGTGACAAATGTGTACCACACAGAGACTTGAATACCACTCTTTGCTCATATGAATCTTGTTCTCAGTCTCTACAGGAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR TCA 90 bp | TTCATGGTTTGTCTATGTTCCACAGTTGCTGAAAGTAACCAATGGTaGGAAAACCAAGTTGAAGCTAGTAATCTGCTAATTGTATTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: FMVCLCSTVAESNQW*ENQVEASNLLIVLK Trigger: TTTCAATACAATTAGCAGATTACTAGCTTCAACTTGGTTTTCTCACCATTGGTTACTTTCAGCAACTGTGGAACATAGACAAACCATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR GCA 90 bp | CCTGGCACTGCTTTCCACTTAATGATTGAACACTATCCCATACCATaGATAGATTGTGTTTTAATAATATGTTTTGGTTATTCTAGACTG | + |
|
Preference number: 1 (lower is better) Translates to: PGTAFHLMIEHYPIP*IDCVLIICFGYSRL Trigger: CAGTCTAGAATAACCAAAACATATTATTAAAACACAATCTATGCATGGTATGGGATAGTGTTCAATCATTAAGTGGAAAGCAGTGCCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTATAGACAGCATGCCATaGCTGACAGGTCTGATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: FLLSPEVSMVLAEPQQELIDSMP*LTGLMP Trigger: TGGCATCAGACCTGTCAGTCATGGCATGCTGTCTAT...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTGGGGTGAAAGATGCCTaGTTTTCATTGTCTAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: FLLSPEVSMVLAEPQQELGVKDA*FSLSSQ Trigger: TTGACTAGACAATGAAAACCAGGCATCTTTCACCCC...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTGGGTTCATTTCTGGGTCCTGGAGGCTGGCCAGTGTaGTATGGATATTTCCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPCQRSSDHRYVGSFLGPGGWPV*YGYFLF Trigger: AAACAGGAAATATCCATATCACACTGGCCAGCCTCC...AGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR GCA 90 bp | TTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTCCCCCTGTGCCCATATATCGCCACAATTGCCCTaGAGCACAGCTCTAGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LQHKPLLFYSGISPCAHISPQLP*STALGQ Trigger: CTGACCTAGAGCTGTGCTGCAGGGCAATTGTGGCGA...TATATGGGCACAGGGGGAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTCATATGAGCAAAGAGTaGTATTCAAGTCTCTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FLLSPEVSMVLAEPQQELHMSKE*YSSLCV Trigger: CACACAGAGACTTGAATACCACTCTTTGCTCATATG...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 90 bp | AGCTCTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTCTATCCTaGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: SSRSGMVIPPEVLLS*RRVFAILGFLPFQM Trigger: CATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGATAGAAGAACCTCTGGTGGAATCACCATGCCTGACCTAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | CATATCACACTGGCCAGCCTCCTGGAGCTTCAAGACTCTACCCCACTCCTTTCTTTCTGCCATTCCAGATaGATTTACAGATTGCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: HITLASLLELQDSTPLLSFCHSR*IYRLLF Trigger: AAAGAGCAATCTGTAAATTCATCTGGAATGGCAGAA...AGAAAGGAGTGGGGTAGAGTCTTGAAGCTCCAGGAGGCTGGCCAGTGTGATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTTATAGTTTTGTCAATTaGCCAATAAGCAGTAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FLLSPEVSMVLAEPQQELYSFVN*PISSSA Trigger: AGCACTACTGCTTATTGGGCAATTGACAAAACTATA...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCCCCAGCAAGTTCATGGTTTGTCTATGTTCCACAGTTGCTGAAAGTAACCAAATAGACAGCATGCCATaGCTGACAGGTCTGATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: FPSKFMVCLCSTVAESNQIDSMP*LTGLMP Trigger: TGGCATCAGACCTGTCAGTCATGGCATGCTGTCTAT...TTGGTTACTTTCAGCAACTGTGGAACATAGACAAACCATGAACTTGCTGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTCCCCCTGTGCCCATATAGGAGGCTGGCCAGTGTaGTATGGATATTTCCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LQHKPLLFYSGISPCAHIGGWPV*YGYFLF Trigger: AAACAGGAAATATCCATATCACACTGGCCAGCCTCC...TATATGGGCACAGGGGGAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAACCTATTACACTGGTCCTGACTTTCCACTTTGTTTCTATTGGGTCTCCTGTGGAGGCTGGCCAGTGTaGTATGGATATTTCCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PTYYTGPDFPLCFYWVSCGGWPV*YGYFLF Trigger: AAACAGGAAATATCCATATCACACTGGCCAGCCTCC...ACAGGAGACCCAATAGAAACAAAGTGGAAAGTCAGGACCAGTGTAATAGGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTGGGTTCATTTCTGGGTCCTAAATACACAGGTTTATaGCACTTGTTCCCTGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LPCQRSSDHRYVGSFLGPKYTGL*HLFPAE Trigger: TTCAGCAGGGAACAAGTGTCATAAACCTGTGTATTT...AGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTCTAGGTCAGGCATGGTaGTTCCACCAGAGGTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSVMACCLCAFPDVKYVALGQAW*FHQRFF Trigger: GAAGAACCTCTGGTGGAATCACCATGCCTGACCTAG...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTCCCCCTGTGCCCATATAGCCAATCCATGGGCATaGGAGATCTTTCCATCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LQHKPLLFYSGISPCAHIANPWA*EIFPSS Trigger: AGAAGATGGAAAGATCTCCCATGCCCATGGATTGGC...TATATGGGCACAGGGGGAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTCCCCCTGTGCCCATATAATGTGGGTTCATTTCTaGGTCCTCAACTCCACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LQHKPLLFYSGISPCAHIMWVHF*VLNSTP Trigger: TGGAGTGGAGTTGAGGACCCAGAAATGAACCCACAT...TATATGGGCACAGGGGGAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAACCTATTACACTGGTCCTGACTTTCCACTTTGTTTCTATTGGGTCTCCTGTTGTTCCCTGCTGAATTaGAAGTCTGTCCATCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PTYYTGPDFPLCFYWVSCCSLLN*KSVHQA Trigger: TGCTTGATGGACAGACTTTCAATTCAGCAGGGAACA...ACAGGAGACCCAATAGAAACAAAGTGGAAAGTCAGGACCAGTGTAATAGGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTGGGTTCATTTCTGGGTCCTTTTTCCTGTAGAGACTaGGAACAAGATTCATATGAG | + |
|
Preference number: 2 (lower is better) Translates to: LPCQRSSDHRYVGSFLGPFSCRD*EQDSYE Trigger: CTCATATGAATCTTGTTCTCAGTCTCTACAGGAAAA...AGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTCTCAGCCCCCTATCCTaGCACTGCTTTCCACTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: LSVMACCLCAFPDVKYVALSPLS*HCFPLN Trigger: ATTAAGTGGAAAGCAGTGCCAGGATAGGGGGCTGAG...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGCTCAGCCCCCTATCCTaGCACTGCTTTCCACTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: NLLHENHQLCQHHLLKMLLSPLS*HCFPLN Trigger: ATTAAGTGGAAAGCAGTGCCAGGATAGGGGGCTGAG...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTGGGTTCATTTCTGGGTCCTATTCAAGTCTCTGTGTaGTACACATTTGTCACAATG | + |
|
Preference number: 2 (lower is better) Translates to: LPCQRSSDHRYVGSFLGPIQVSV*YTFVTM Trigger: CATTGTGACAAATGTGTACCACACAGAGACTTGAAT...AGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 90 bp | GGGGATTGTATTGAATCTGTTGGCAAGATAGCCATTTTTACAATGTaGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GDCIESVGKIAIFTM*ILPIHGHGRSFHLL Trigger: CAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAACAGATTCAATACAATCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGGCCAATCCATGGGCATaGGAGATCTTTCCATCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: NLLHENHQLCQHHLLKMLANPWA*EIFPSS Trigger: AGAAGATGGAAAGATCTCCCATGCCCATGGATTGGC...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 90 bp | CCTTTGATGAGAATGAAGTGCCCCTCCTTGTCTCTTTTGATGACTTaGGGTTGGAAGTCAATCTTATCAGATATTAGGATGGCTACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: PLMRMKCPSLSLLMT*GWKSILSDIRMATP Trigger: TGGAGTAGCCATCCTAATATCTGATAAGATTGACTTCCAACCCAAAGTCATCAAAAGAGACAAGGAGGGGCACTTCATTCTCATCAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTCCCCCTGTGCCCATATAGAAAGTAACCAATGGTaGGAAAACCAAGTTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LQHKPLLFYSGISPCAHIESNQW*ENQVEA Trigger: AGCTTCAACTTGGTTTTCTCACCATTGGTTACTTTC...TATATGGGCACAGGGGGAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTCCACTTTGTTTCTATTaGGTCTCCTGTTATTCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LILPIHGHGRSFHLLRSSPLCFY*VSCYSL Trigger: TAGAGAATAACAGGAGACCCAATAGAAACAAAGTGG...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTAGCCAATCCATGGGCATaGGAGATCTTTCCATCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLRRVFAILGFLPFQMNLANPWA*EIFPSS Trigger: AGAAGATGGAAAGATCTCCCATGCCCATGGATTGGC...TAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTATGTTCCCTGCTGAATTaGAAGTCTGTCCATCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLRRVFAILGFLPFQMNLCSLLN*KSVHQA Trigger: TGCTTGATGGACAGACTTTCAATTCAGCAGGGAACA...TAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTAAAAACATACTAAGATaGCAATTGAACCCTCTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LILPIHGHGRSFHLLRSSKNILR*QLNPLA Trigger: AGCTAGAGGGTTCAATTGGCATCTTAGTATGTTTTT...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGCTTGAGAAGAGTCTTTaGTATCCTAGGTTTTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: NLLHENHQLCQHHLLKMLLEKSL*YPRFSA Trigger: GGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAG...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTATTTCTCACCATTGGTTaGTTTCAGCAACTGTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVFLTIG*FQQLWN Trigger: GTTCCACAGTTGCTGAAAGCAACCAATGGTGAGAAA...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTGTCTTTTAAAGCATTGTGTGGCATACATACTGTCATCTCTGTGAAAACACTCAGCCCCCTATCCTaGCACTGCTTTCCACTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SLSFKALCGIHTVISVKTLSPLS*HCFPLN Trigger: ATTAAGTGGAAAGCAGTGCCAGGATAGGGGGCTGAG...TGTTTTCACAGAGATGACAGTATGTATGCCACACAATGCTTTAAAAGACAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTAGGGGTGAAAGATGCCTaGTTTTCATTGTCTAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVGVKDA*FSLSSQ Trigger: TTGACTAGACAATGAAAACCAGGCATCTTTCACCCC...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTACAGATTGCTCTTTCTACACTTGTTCCCTGCTaGATTGAAAGTCTGTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: FAILGFLPFQMNLQIALSTLVPC*IESLSI Trigger: GATGGACAGACTTTCAATTCAGCAGGGAACAAGTGT...AGAAAGAGCAATCTGTAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGCTATTACACTGGTCCTaGCTTTCCACTTTGTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: NLLHENHQLCQHHLLKMLLLHWS*LSTLFL Trigger: TAGAAACAAAGTGGAAAGTCAGGACCAGTGTAATAG...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAACCTATTACACTGGTCCTGACTTTCCACTTTGTTTCTATTGGGTCTCCTGTTATAGTTTTGTCAATTaGCCAATAAGCAGTAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PTYYTGPDFPLCFYWVSCYSFVN*PISSSA Trigger: AGCACTACTGCTTATTGGGCAATTGACAAAACTATA...ACAGGAGACCCAATAGAAACAAAGTGGAAAGTCAGGACCAGTGTAATAGGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAACCTATTACACTGGTCCTGACTTTCCACTTTGTTTCTATTGGGTCTCCTGTAAAAACATACTAAGATaGCAATTGAACCCTCTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PTYYTGPDFPLCFYWVSCKNILR*QLNPLA Trigger: AGCTAGAGGGTTCAATTGGCATCTTAGTATGTTTTT...ACAGGAGACCCAATAGAAACAAAGTGGAAAGTCAGGACCAGTGTAATAGGTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTAAGGAATTTCCCCCTGTaGCCATATATTTGTGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVRNFPL*PYICVF Trigger: AAAGACACAAATATATGGGCACAGGGGGAAATTCCT...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTAAGCTCATGTCTTTATaGCATCGGCTAATACCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSVMACCLCAFPDVKYVAKLMSL*HRLIPK Trigger: CTTTGGTATTAGCCGATGCCATAAAGACATGAGCTT...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTTGTCTCAGTTTCATGTaGAGTTCCTTGATCCACTTA | + |
|
Preference number: 2 (lower is better) Translates to: LSVMACCLCAFPDVKYVACLSFM*SSLIHL Trigger: TAAGTGGATCAAGGAACTCCACATGAAACTGAGACA...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTATGTCTCAGTTTCATGTaGAGTTCCTTGATCCACTTA | + |
|
Preference number: 2 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVCLSFM*SSLIHL Trigger: TAAGTGGATCAAGGAACTCCACATGAAACTGAGACA...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 90 bp | AGGATTTTACCTTTGATGAGAATGAAGTGCCCCTCCTTGTCTCTTTaGATGACTTTGGGTTGGAAGTCAATCTTATCAGATATTAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: RILPLMRMKCPSLSL*MTLGWKSILSDIRM Trigger: CATCCTAATATCTGATAAGATTGACTTCCAACCCAAAGTCATCAAAAGAGACAAGGAGGGGCACTTCATTCTCATCAAAGGTAAAATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTAGAAAGTAACCAATGGTaGGAAAACCAAGTTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLRRVFAILGFLPFQMNLESNQW*ENQVEA Trigger: AGCTTCAACTTGGTTTTCTCACCATTGGTTACTTTC...TAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTAAAATACACAGGTTTATaGCACTTGTTCCCTGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SLRRVFAILGFLPFQMNLKYTGL*HLFPAE Trigger: TTCAGCAGGGAACAAGTGTCATAAACCTGTGTATTT...TAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTTTTTCCTGTAGAGACTaGGAACAAGATTCATATGAG | + |
|
Preference number: 2 (lower is better) Translates to: LSVMACCLCAFPDVKYVAFSCRD*EQDSYE Trigger: CTCATATGAATCTTGTTCTCAGTCTCTACAGGAAAA...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTACCACTTTGTTTCTATTaGGTCTCCTGTTATTCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVPLCFY*VSCYSL Trigger: TAGAGAATAACAGGAGACCCAATAGAAACAAAGTGG...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTAATTCAAGTCTCTGTGTaGTACACATTTGTCACAATG | + |
|
Preference number: 2 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVIQVSV*YTFVTM Trigger: CATTGTGACAAATGTGTACCACACAGAGACTTGAAT...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTAAAGCTCATGTCTTTATaGCATCGGCTAATACCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SLRRVFAILGFLPFQMNLKLMSL*HRLIPK Trigger: CTTTGGTATTAGCCGATGCCATAAAGACATGAGCTT...TAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTACAGATTGCTCTTTCTGAAAGTAACCAATGGTaGGAAAACCAAGTTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FAILGFLPFQMNLQIALSESNQW*ENQVEA Trigger: AGCTTCAACTTGGTTTTCTCACCATTGGTTACTTTC...AGAAAGAGCAATCTGTAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTACAGATTGCTCTTTCTCTATTACACTGGTCCTaGCTTTCCACTTTGTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FAILGFLPFQMNLQIALSLLHWS*LSTLFL Trigger: TAGAAACAAAGTGGAAAGTCAGGACCAGTGTAATAG...AGAAAGAGCAATCTGTAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTATTTTCCTGTAGAGACTaGGAACAAGATTCATATGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLRRVFAILGFLPFQMNLFSCRD*EQDSYE Trigger: CTCATATGAATCTTGTTCTCAGTCTCTACAGGAAAA...TAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTAATTATTGTCTTCAACTaGGTTTTCTCACCATTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVIIVFN*VFSPLV Trigger: AACCAATGGTGAGAAAACCCAGTTGAAGACAATAAT...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTAAGCACTACTGCTTATTaGGCAATTGACAAAACTATA | + |
|
Preference number: 2 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVSTTAY*AIDKTI Trigger: TATAGTTTTGTCAATTGCCCAATAAGCAGTAGTGCT...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTAGCACTACTGCTTATTaGGCAATTGACAAAACTATA | + |
|
Preference number: 2 (lower is better) Translates to: LSVMACCLCAFPDVKYVASTTAY*AIDKTI Trigger: TATAGTTTTGTCAATTGCCCAATAAGCAGTAGTGCT...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGAAGTCATATTCCAACCTATTACACTGGTCCTGACTTTCCACTTTGTTTCTATAGTTTTGTCAATTaGCCAATAAGCAGTAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CRSHIPTYYTGPDFPLCFYSFVN*PISSSA Trigger: AGCACTACTGCTTATTGGGCAATTGACAAAACTATA...GAAACAAAGTGGAAAGTCAGGACCAGTGTAATAGGTTGGAATATGACTTCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTGTCTTTTAAAGCATTGTGTGGCATACATACTGTCATCTCTGTGAAAACACATATGAGCAAAGAGTaGTATTCAAGTCTCTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SLSFKALCGIHTVISVKTHMSKE*YSSLCV Trigger: CACACAGAGACTTGAATACCACTCTTTGCTCATATG...TGTTTTCACAGAGATGACAGTATGTATGCCACACAATGCTTTAAAAGACAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 90 bp | TTGGATCTTGTTTGTGTAGCCAGTTTGTTAGTCTATGTCTTTTCTTaGAGTTTGTCTTTTAAAGCATTGTGTGGCATACATACTGTCATC | + |
|
Preference number: 2 (lower is better) Translates to: LDLVCVASLLVYVFS*SLSFKALCGIHTVI Trigger: GATGACAGTATGTATGCCACACAATGCTTTAAAAGACAAACTCAAAGAAAAGACATAGACTAACAAACTGGCTACACAAACAAGATCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 72 bp | TGTGGGTTCATTTCTGGGTCCTCAACTCCACTCCACTaGTCTACCTGTCCGTCGCTATACCAGTACCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: CGFISGSSTPLH*STCPSLYQYHA Trigger: TGCATGGTACTGGTATAGCGACGGACAGGTAGACCAGTGGAGTGGAGTTGAGGACCCAGAAATGAACCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTGAGTGGGGTAGAGTCTaGAAGCTCCAGGAGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LILPIHGHGRSFHLLRSSEWGRV*KLQEAG Trigger: GCCAGCCTCCTGGAGCTTCAAGACTCTACCCCACTC...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CATATCACACTGGCCAGCCTCCTGGAGCTTCAAGACTCTACCCCACTCCTTTCTGAATTCACCACCCATTaGCTCATAAGAACTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HITLASLLELQDSTPLLSEFTTH*LIRTLG Trigger: CCCCAGAGTTCTTATGAGCAAATGGGTGGTGAATTC...AGAAAGGAGTGGGGTAGAGTCTTGAAGCTCCAGGAGGCTGGCCAGTGTGATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 72 bp | AACTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTaGGTTCATTTCTGGGTCCTCAACTCCACTCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: NSLVKDQATTGM*VHFWVLNSTPL Trigger: CAGTGGAGTGGAGTTGAGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTGAGTGGGGTAGAGTCTaGAAGCTCCAGGAGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSVMACCLCAFPDVKYVAEWGRV*KLQEAG Trigger: GCCAGCCTCCTGGAGCTTCAAGACTCTACCCCACTC...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTTGTGTGCAATTCCTTTaGTTTCTGAATCATAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: FLLSPEVSMVLAEPQQELCVQFL*FLNHRT Trigger: AGTCCTATGATTCAGAAACAAAAGGAATTGCACACA...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTGGGTTCATTTCTGGGTCCTCTGTGTCTAACTGTATaGCCACCCTCTATCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LPCQRSSDHRYVGSFLGPLCLTV*PPSISQ Trigger: TTGACTGATAGAGGGTGGCAATACAGTTAGACACAG...AGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CATATCACACTGGCCAGCCTCCTGGAGCTTCAAGACTCTACCCCACTCCTTTCTTCCACTTTGTTTCTATaGGGTCTCCTGTTATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HITLASLLELQDSTPLLSSTLFL*GLLLFS Trigger: AGAGAATAACAGGAGACCCAATAGAAACAAAGTGGA...AGAAAGGAGTGGGGTAGAGTCTTGAAGCTCCAGGAGGCTGGCCAGTGTGATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTCAGCAAGTTCATGGTTaGTCTATGTTCCACAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LILPIHGHGRSFHLLRSSQQVHG*SMFHSC Trigger: GCAACTGTGGAACATAGACAAACCATGAACTTGCTG...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR GCA 72 bp | CCATCTGTCAATTCTCGATCTTACAGCACAAGCCATTaGTGTTCTATTCAGGAATTTCCCCCTGTGCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: PSVNSRSYSTSH*CSIQEFPPVPI Trigger: TATGGGCACAGGGGGAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTCCCCCTGTGCCCATATATTGTTCCCTGCTGAATaGAAAGTCTGTCCATCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQHKPLLFYSGISPCAHILFPAE*KVCPSS Trigger: GCTTGATGGACAGACTTTCAATTCAGCAGGGAACAA...TATATGGGCACAGGGGGAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTGGGTTCATTTCTGGGTCCTTTGTCTTTTAAAGCATaGTGTGGCATACATACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LPCQRSSDHRYVGSFLGPLSFKA*CGIHTV Trigger: GACAGTATGTATGCCACACAATGCTTTAAAAGACAA...AGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTGGGTTCATTTCTGGGTCCTTCTCTTTTGATGACTTaGGGTTGGAAGTCAATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LPCQRSSDHRYVGSFLGPSLLMT*GWKSIL Trigger: TAAGATTGACTTCCAACCCAAAGTCATCAAAAGAGA...AGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR TCA 72 bp | GAACCCCAGCAGGAGCTTTCCTTTTCCTGTAGAGACTaGGAACAAGATTCATATGAGCAAAGAGTGGTATTC | + |
|
Preference number: 3 (lower is better) Translates to: EPQQELSFSCRD*EQDSYEQRVVF Trigger: GAATACCACTCTTTGCTCATATGAATCTTGTTCTCAGTCTCTACAGGAAAAGGAAAGCTCCTGCTGGGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR TCA 72 bp | CAGACTTTCAATTCAGCAGGGAATTCAGCAGGGAATTaGAAGTCAGGTGTCTTTTGCCTTACAGAAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QTFNSAGNSAGN*KSGVFCLTEAL Trigger: CAGAGCTTCTGTAAGGCAAAAGACACCTGACTTTCAATTCCCTGCTGAATTCCCTGCTGAATTGAAAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR GCA 72 bp | TCCTCTTGGAGGATTTTACCTTTGATGAGAATGAAGTaGCCCTCCTTGTCTCTTTTGATGACTTTGGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSWRILPLMRMK*PSLSLLMTLGW Trigger: CCAACCCAAAGTCATCAAAAGAGACAAGGAGGGGCACTTCATTCTCATCAAAGGTAAAATCCTCCAAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 72 bp | GCTTCAAGACTCTACCCCACTCCTTTCTTTAAACCTTaGTCCTCCTCATTCAGTCTGCACTGTAATTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASRLYPTPFFKP*SSSFSLHCNYF Trigger: GAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAAAGGAGTGGGGTAGAGTCTTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTAGAATTCACCACCCATTaGCTCATAAGAACTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVEFTTH*LIRTLG Trigger: CCCCAGAGTTCTTATGAGCAAATGGGTGGTGAATTC...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTCCCCCTGTGCCCATATATTGTGCCAGCACCATTaGTTGAAAATGCTGTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LQHKPLLFYSGISPCAHILCQHH*LKMLSF Trigger: AAAGGACAGCATTTTCAACAAATGGTGCTGGCACAA...TATATGGGCACAGGGGGAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR TCA 72 bp | AGCCCCCTATCCTGGCACTGCTTTCCACTTAATGATTaGACACTATCCCATACCATGCATAGATTGTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPLSWHCFPLND*TLSHTMHRLCF Trigger: AAAACACAATCTATGCATGGTATGGGATAGTGTTCAATCATTAAGTGGAAAGCAGTGCCAGGATAGGGGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 72 bp | GATAGCCATTTTTACAATGTTGATCCTGCCAATCCATaGGCATGGGAGATCTTTCCATCTTCTGAGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: DSHFYNVDPANP*AWEIFPSSEIF Trigger: GAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTGTGTGCAATTCCTTTaGTTTCTGAATCATAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LILPIHGHGRSFHLLRSSCVQFL*FLNHRT Trigger: AGTCCTATGATTCAGAAACAAAAGGAATTGCACACA...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTCTGTGTCTAACTGTATaGCCACCCTCTATCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSVMACCLCAFPDVKYVALCLTV*PPSISQ Trigger: TTGACTGATAGAGGGTGGCAATACAGTTAGACACAG...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGAAGTCATATTCCAACCTATTACACTGGTCCTGACTTTCCACTTTGTTTCGAATTCACCACCCATTaGCTCATAAGAACTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CRSHIPTYYTGPDFPLCFEFTTH*LIRTLG Trigger: CCCCAGAGTTCTTATGAGCAAATGGGTGGTGAATTC...GAAACAAAGTGGAAAGTCAGGACCAGTGTAATAGGTTGGAATATGACTTCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTGTCTTTTAAAGCATaGTGTGGCATACATACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LILPIHGHGRSFHLLRSSLSFKA*CGIHTV Trigger: GACAGTATGTATGCCACACAATGCTTTAAAAGACAA...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTATGGAGGATTTTACCTTaGATGAGAATGAAGTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVWRILP*MRMKCP Trigger: GGGGCACTTCATTCTCATCAAAGGTAAAATCCTCCA...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTGCCATTTTTACAATGTaGATCCTGCCAATCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSVMACCLCAFPDVKYVAAIFTM*ILPIHG Trigger: CCCATGGATTGGCAGGATCAACATTGTAAAAATGGC...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTAAAGTCAGGTGTCTTTaGCCTTACAGAAGCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSVMACCLCAFPDVKYVAKVRCL*PYRSSA Trigger: TGCAGAGCTTCTGTAAGGCAAAAGACACCTGACTTT...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTTGGGTTTTCTCACCATaGGTTGCTTTCAGCAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSVMACCLCAFPDVKYVAWVFSP*VAFSNC Trigger: ACAGTTGCTGAAAGCAACCAATGGTGAGAAAACCCA...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTATTGTTCCCTGCTGAATaGAAAGTCTGTCCATCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLRRVFAILGFLPFQMNLLFPAE*KVCPSS Trigger: GCTTGATGGACAGACTTTCAATTCAGCAGGGAACAA...TAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTATTGTGCCAGCACCATTaGTTGAAAATGCTGTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVLCQHH*LKMLSF Trigger: AAAGGACAGCATTTTCAACAAATGGTGCTGGCACAA...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTACAGATTGCTCTTTCTCTGTGTCTAACTGTATaGCCACCCTCTATCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FAILGFLPFQMNLQIALSLCLTV*PPSISQ Trigger: TTGACTGATAGAGGGTGGCAATACAGTTAGACACAG...AGAAAGAGCAATCTGTAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCCACTTTGTTTCTATaGGGTCTCCTGTTATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NLLHENHQLCQHHLLKMLSTLFL*GLLLFS Trigger: AGAGAATAACAGGAGACCCAATAGAAACAAAGTGGA...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTACAGATTGCTCTTTCTATGAAGTGCCCCTCCTaGTCTCTTTTGATGACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FAILGFLPFQMNLQIALSMKCPS*SLLMTL Trigger: CAAAGTCATCAAAAGAGACAAGGAGGGGCACTTCAT...AGAAAGAGCAATCTGTAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTACAGATTGCTCTTTCTGCCATTTTTACAATGTaGATCCTGCCAATCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: FAILGFLPFQMNLQIALSAIFTM*ILPIHG Trigger: CCCATGGATTGGCAGGATCAACATTGTAAAAATGGC...AGAAAGAGCAATCTGTAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 72 bp | GTAGAGACTGAGAACAAGATTCATATGAGCAAAGAGTaGTATTCAAGTCTCTGTGTGGTACACATTTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VETENKIHMSKE*YSSLCVVHICH Trigger: GTGACAAATGTGTACCACACAGAGACTTGAATACCACTCTTTGCTCATATGAATCTTGTTCTCAGTCTCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 72 bp | GACTTCAACACACCACTTTCACCAATGGACAGATCATaGAAACAGAAACTAAACAGGGACACAATGAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: DFNTPLSPMDRS*KQKLNRDTMKL Trigger: TAGTTTCATTGTGTCCCTGTTTAGTTTCTGTTTCCATGATCTGTCCATTGGTGAAAGTGGTGTGTTGAAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR GCA 72 bp | AAGATGCCTGGTTTTCATTGTCTAGTCAAATATGGATaGTGGGTATACGGATTCAGGATTTTATTGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KMPGFHCLVKYG*WVYGFRILLCS Trigger: ACTGCACAATAAAATCCTGAATCCGTATACCCAGCATCCATATTTGACTAGACAATGAAAACCAGGCATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR GCA 72 bp | CTCATCAAGTCTGTAAACATAGGCACCTATGCATTATaGCATGCATGTAGAAGTCATATTCCAACCTATTAC | + |
|
Preference number: 3 (lower is better) Translates to: LIKSVNIGTYAL*HACRSHIPTYY Trigger: GTAATAGGTTGGAATATGACTTCTACATGCATGGCATAATGCATAGGTGCCTATGTTTACAGACTTGATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 72 bp | CTTTGGGTTGGAAGTCAATCTTATCAGATATTAGGATaGCTACTCCAGCTTGTTTCTTCATACCATTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LWVGSQSYQILG*LLQLVSSYHLL Trigger: AAGCAAATGGTATGAAGAAACAAGCTGGAGTAGCCATCCTAATATCTGATAAGATTGACTTCCAACCCAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 72 bp | CATTTTTACAATGTTGATCCTGCCAATCCATGGGCATaGGAGATCTTTCCATCTTCTGAGATCTTCTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: HFYNVDPANPWA*EIFPSSEIFFN Trigger: ATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAACATTGTAAAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTACAGATTGCTCTTTCTTCCACTTTGTTTCTATaGGGTCTCCTGTTATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FAILGFLPFQMNLQIALSSTLFL*GLLLFS Trigger: AGAGAATAACAGGAGACCCAATAGAAACAAAGTGGA...AGAAAGAGCAATCTGTAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR TCA 72 bp | GCCAAGGTATTCTATATTATTTGTGACTCTCAATTCTaGATATCTATGCTCCAAATACAAGGGCAGCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: AKVFYIICDSQF*ISMLQIQGQPH Trigger: ATGTGGCTGCCCTTGTATTTGGAGCATAGATATTCAGAATTGAGAGTCACAAATAATATAGAATACCTTGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CCA 72 bp | TTTCTCCTTCATAAGTTTCAGTGTCTCAGTTTCATGTaGAGTTCCTTGATCCACTTAGATTTGACCTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLLHKFQCLSFM*SSLIHLDLTLV Trigger: TACTAAGGTCAAATCTAAGTGGATCAAGGAACTCCACATGAAACTGAGACACTGAAACTTATGAAGGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGTCTTTTAAAGCATTGTGTGGCATACATACTGTCATCTCTGTGAAAACATGTGTGCAATTCCTTTaGTTTCTGAATCATAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: SLSFKALCGIHTVISVKTCVQFL*FLNHRT Trigger: AGTCCTATGATTCAGAAACAAAAGGAATTGCACACA...TGTTTTCACAGAGATGACAGTATGTATGCCACACAATGCTTTAAAAGACAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR TCA 72 bp | CAAATACATCATATATTCCATAAATACACAGGTTTATaGCACTTGTTCCCTGCTGAATTGAAAGTCTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QIHHIFHKYTGL*HLFPAELKVCP Trigger: TGGACAGACTTTCAATTCAGCAGGGAACAAGTGTCATAAACCTGTGTATTTATGGAATATATGATGTATTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTTGGGCCTGTTTCCTGTaGATGCACAAGAGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FLLSPEVSMVLAEPQQELWACFL*MHKRAT Trigger: GGTGGCCCTCTTGTGCATGCACAGGAAACAGGCCCA...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTGGTGGCCCTTTGCTCTaGGGATGCTTTGAGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLSPEVSMVLAEPQQELGGPLL*GCFEGK Trigger: CTTTCCCTCAAAGCATCCGCAGAGCAAAGGGCCACC...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTAAGGAAACTGTTGCCTaGGATCCCAATGCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLSPEVSMVLAEPQQELKETVA*DPNANF Trigger: GAAATTGGCATTGGGATCTCAGGCAACAGTTTCCTT...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTAATACATGCTTTGCATaGGGTAACTCAAGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLLSPEVSMVLAEPQQELNTCFA*GNSRVE Trigger: TTCTACCCTTGAGTTACCTCATGCAAAGCATGTATT...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTGGGTTCATTTCTGGGTCCTGCACAGGAGATGTTATaGGAAGATTTGCGCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPCQRSSDHRYVGSFLGPAQEML*EDLRLN Trigger: GTTCAAGCGCAAATCTTCTCATAACATCTCCTGTGC...AGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTTGGGCCTGTTTCCTGTaGATGCACAAGAGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSVMACCLCAFPDVKYVAWACFL*MHKRAT Trigger: GGTGGCCCTCTTGTGCATGCACAGGAAACAGGCCCA...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTCAAGAACATAGCTCTTaGGGAGGAGACAATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LILPIHGHGRSFHLLRSSQEHSS*GGDNAV Trigger: GACAGCATTGTCTCCTCCTCAAGAGCTATGTTCTTG...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | CCAACCTATTACACTGGTCCTGACTTTCCACTTTGTTTCTATTGGGTCTCCTGTCCTTTGCTCTGCGGATaGTTTGAGGGAAAGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTYYTGPDFPLCFYWVSCPLLCG*FEGKTG Trigger: ACCAGTCTTTCCCTCAAAGCATCCGCAGAGCAAAGG...ACAGGAGACCCAATAGAAACAAAGTGGAAAGTCAGGACCAGTGTAATAGGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTGGTGGCCCTTTGCTCTaGGGATGCTTTGAGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVMACCLCAFPDVKYVAGGPLL*GCFEGK Trigger: CTTTCCCTCAAAGCATCCGCAGAGCAAAGGGCCACC...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 72 bp | CCCATCTGTCAATTCTCGATCTTACAGCACAAGCCATaGCTGTTCTATTCAGGAATTTCCCCCTGTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PICQFSILQHKP*LFYSGISPCAH Trigger: ATGGGCACAGGGGGAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAGATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTAAGGAAACTGTTGCCTaGGATCCCAATGCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LILPIHGHGRSFHLLRSSKETVA*DPNANF Trigger: GAAATTGGCATTGGGATCTCAGGCAACAGTTTCCTT...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTGAAGAAGGAAACTGTTaGCTGAGATCCCAATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LILPIHGHGRSFHLLRSSEEGNC*LRSQCQ Trigger: TTGGCATTGGGATCTCAGGCAACAGTTTCCTTCTTC...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTAGGTGGCCCTTTGCTCTaGGGATGCTTTGAGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRRVFAILGFLPFQMNLGGPLL*GCFEGK Trigger: CTTTCCCTCAAAGCATCCGCAGAGCAAAGGGCCACC...TAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 72 bp | TCAGGCATGGTGATTCCACCAGAGGTTCTTCTATCCTaGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGMVIPPEVLLS*RRVFAILGFLP Trigger: TGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGATAGAAGAACCTCTGGTGGAATCACCATGCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | CCAACCTATTACACTGGTCCTGACTTTCCACTTTGTTTCTATTGGGTCTCCTGTGAAGAAGGAAACTGTTaGCTGAGATCCCAATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTYYTGPDFPLCFYWVSCEEGNC*LRSQCQ Trigger: TTGGCATTGGGATCTCAGGCAACAGTTTCCTTCTTC...ACAGGAGACCCAATAGAAACAAAGTGGAAAGTCAGGACCAGTGTAATAGGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTACCTTTGCTCTGCGGATaGTTTGAGGGAAAGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVPLLCG*FEGKTG Trigger: ACCAGTCTTTCCCTCAAAGCATCCGCAGAGCAAAGG...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCCAGCAAGTTCATGGTTTGTCTATGTTCCACAGTTGCTGAAAGTAACCAAAAGGAAACTGTTGCCTaGGATCCCAATGCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPSKFMVCLCSTVAESNQKETVA*DPNANF Trigger: GAAATTGGCATTGGGATCTCAGGCAACAGTTTCCTT...TTGGTTACTTTCAGCAACTGTGGAACATAGACAAACCATGAACTTGCTGGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | TTGATCCTGCCAATCCATGGGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTAATACATGCTTTGCATaGGGTAACTCAAGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LILPIHGHGRSFHLLRSSNTCFA*GNSRVE Trigger: TTCTACCCTTGAGTTACCTCATGCAAAGCATGTATT...AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCCCATGGATTGGCAGGATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCAGTCATGGCATGCTGTCTATGTGCTTTTCCAGATGTTAAATATGTAGCTCAAGAACATAGCTCTTaGGGAGGAGACAATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVMACCLCAFPDVKYVAQEHSS*GGDNAV Trigger: GACAGCATTGTCTCCTCCTCAAGAGCTATGTTCTTG...AGCTACATATTTAACATCTGGAAAAGCACATAGACAGCATGCCATGACTGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGAAGTCATATTCCAACCTATTACACTGGTCCTGACTTTCCACTTTGTTTCCCTTTGCTCTGCGGATaGTTTGAGGGAAAGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CRSHIPTYYTGPDFPLCFPLLCG*FEGKTG Trigger: ACCAGTCTTTCCCTCAAAGCATCCGCAGAGCAAAGG...GAAACAAAGTGGAAAGTCAGGACCAGTGTAATAGGTTGGAATATGACTTCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 72 bp | TCCCCAGCAAGTTCATGGTTTGTCTATGTTCCACAGTaGCTGAAAGTAACCAATGGTGAGAAAACCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPASSWFVYVPQ*LKVTNGEKTKL Trigger: CAACTTGGTTTTCTCACCATTGGTTACTTTCAGCAACTGTGGAACATAGACAAACCATGAACTTGCTGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTAGCACAGGAGATGTTATaGGAAGATTTGCGCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVAQEML*EDLRLN Trigger: GTTCAAGCGCAAATCTTCTCATAACATCTCCTGTGC...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR GCA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGGAAGAAGGAAACTGTTaGCTGAGATCCCAATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NLLHENHQLCQHHLLKMLEEGNC*LRSQCQ Trigger: TTGGCATTGGGATCTCAGGCAACAGTTTCCTTCTTC...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGAATACATGCTTTGCATaGGGTAACTCAAGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLLHENHQLCQHHLLKMLNTCFA*GNSRVE Trigger: TTCTACCCTTGAGTTACCTCATGCAAAGCATGTATT...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTGTCTTTTAAAGCATTGTGTGGCATACATACTGTCATCTCTGTGAAAACACAAGAACATAGCTCTTaGGGAGGAGACAATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSFKALCGIHTVISVKTQEHSS*GGDNAV Trigger: GACAGCATTGTCTCCTCCTCAAGAGCTATGTTCTTG...TGTTTTCACAGAGATGACAGTATGTATGCCACACAATGCTTTAAAAGACAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 72 bp | GATGGCTACTCCAGCTTGTTTCTTCATACCATTTGCTaGGAAAATTGTTTTCCAGCCTTTCATTCTAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DGYSSLFLHTIC*ENCFPAFHSKV Trigger: TACCTTAGAATGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTATGAAGAAACAAGCTGGAGTAGCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| 3UTR CAA 72 bp | AGCAGCAAAATGTTGGATCTTGTTTGTGTAGCCAGTTaGTTAGTCTATGTCTTTTCTTTGAGTTTGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKMLDLVCVAS*LVYVFSLSLSF Trigger: AAAAGACAAACTCAAAGAAAAGACATAGACTAACAAACTGGCTACACAAACAAGATCCAACATTTTGCTGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGTAGAGTCTTGAAGCTCCAGGAGGCTGGCCAGTGTGATATGGATATTTCCGGTCTGGGTGGCCCTTaGCTCTGCGGATGCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WGRVLKLQEAGQCDMDISGLGGP*LCGCFE Trigger: CTCAAAGCATCCGCAGAGCAAAGGGCCACCCAGACC...GGAAATATCCATATCACACTGGCCAGCCTCCTGGAGCTTCAAGACTCTACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGCTGAGTCCAGAAGTGAGCATGGTGCTGGCAGAACCCCAGCAGGAGCTTTGCCCACGAAAGAACTaGATGATATGGAAGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLSPEVSMVLAEPQQELCPRKN*MIWKRR Trigger: TCTTCTCTTCCATATCATCAAGTTCTTTCGTGGGCA...AAGCTCCTGCTGGGGTTCTGCCAGCACCATGCTCACTTCTGGACTCAGCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTAGGTCTGGGTGGCCCTTaGCTCTGCGGATGCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVGLGGP*LCGCFE Trigger: CTCAAAGCATCCGCAGAGCAAAGGGCCACCCAGACC...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGGGTCTGGGTGGCCCTTaGCTCTGCGGATGCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NLLHENHQLCQHHLLKMLGLGGP*LCGCFE Trigger: CTCAAAGCATCCGCAGAGCAAAGGGCCACCCAGACC...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCCAGCAAGTTCATGGTTTGTCTATGTTCCACAGTTGCTGAAAGTAACCAATGCTCTGCGGATGCTTaGAGGGAAAGACTGGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: FPSKFMVCLCSTVAESNQCSADA*RERLVP Trigger: GGGTACCAGTCTTTCCCTCAAAGCATCCGCAGAGCA...TTGGTTACTTTCAGCAACTGTGGAACATAGACAAACCATGAACTTGCTGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCTTGTCAAAGATCAAGCGACCACAGGTATGTGGGTTCATTTCTGGGTCCTTGCCCACGAAAGAACTaGATGATATGGAAGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPCQRSSDHRYVGSFLGPCPRKN*MIWKRR Trigger: TCTTCTCTTCCATATCATCAAGTTCTTTCGTGGGCA...AGGACCCAGAAATGAACCCACATACCTGTGGTCGCTTGATCTTTGACAAGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTGCTCTGCGGATGCTTaGAGGGAAAGACTGGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: NLLHENHQLCQHHLLKMLCSADA*RERLVP Trigger: GGGTACCAGTCTTTCCCTCAAAGCATCCGCAGAGCA...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTAAACCTTGGTCCTCCTCATTCAGTCTGCACTGTAATTACTTCCTGGTAAGAAGAAGGAAACTGTaGCCTGAGATCCCAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FFKPWSSSFSLHCNYFLVRRRKL*PEIPMP Trigger: TGGCATTGGGATCTCAGGCAACAGTTTCCTTCTTCT...TACCAGGAAGTAATTACAGTGCAGACTGAATGAGGAGGACCAAGGTTTAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | AATCTTCTACATGAAAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGAGAAGAAGGAAACTGTaGCCTGAGATCCCAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NLLHENHQLCQHHLLKMLRRRKL*PEIPMP Trigger: TGGCATTGGGATCTCAGGCAACAGTTTCCTTCTTCT...CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTTTCATGTAGAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTGTCTTTTAAAGCATTGTGTGGCATACATACTGTCATCTCTGTGAAAACATGCTCTGCGGATGCTTaGAGGGAAAGACTGGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSFKALCGIHTVISVKTCSADA*RERLVP Trigger: GGGTACCAGTCTTTCCCTCAAAGCATCCGCAGAGCA...TGTTTTCACAGAGATGACAGTATGTATGCCACACAATGCTTTAAAAGACAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTGAGAAGAGTCTTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTAAGAAGAAGGAAACTGTaGCCTGAGATCCCAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRRVFAILGFLPFQMNLRRRKL*PEIPMP Trigger: TGGCATTGGGATCTCAGGCAACAGTTTCCTTCTTCT...TAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAAGACTCTTCTCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | TTTGCTATCCTAGGTTTTCTGCCATTCCAGATGAATTTACAGATTGCTCTTTCTTGTAGAATACATGCTTaGCATGAGGTAACTCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FAILGFLPFQMNLQIALSCRIHA*HEVTQG Trigger: CCCTTGAGTTACCTCATGCAAAGCATGTATTCTACA...AGAAAGAGCAATCTGTAAATTCATCTGGAATGGCAGAAAACCTAGGATAGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTGTCTTTTAAAGCATTGTGTGGCATACATACTGTCATCTCTGTGAAAACATGTAGAATACATGCTTaGCATGAGGTAACTCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSFKALCGIHTVISVKTCRIHA*HEVTQG Trigger: CCCTTGAGTTACCTCATGCAAAGCATGTATTCTACA...TGTTTTCACAGAGATGACAGTATGTATGCCACACAATGCTTTAAAAGACAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS CCA 72 bp | GTGGCTATGACCGCTGCAACCAGTAGCATCAGTAGGTaGATTAGGGACAAGAGACCAATGGGCAGGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VAMTAATSSISR*IRDKRPMGRSV Trigger: CACTGACCTGCCCATTGGTCTCTTGTCCCTAATCCACCTACTGATGCTACTGGTTGCAGCGGTCATAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074881.2 ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS TCA 72 bp | TGCTCTGCGGATGCTTTGAGGGAAAGACTGGTACCCTaGAGATTCTGGGCCTGTTTCCTGTGCATGCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSADALRERLVP*RFWACFLCMHK Trigger: CTTGTGCATGCACAGGAAACAGGCCCAGAATCTTCAGGGTACCAGTCTTTCCCTCAAAGCATCCGCAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074881.2 ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS GCA 72 bp | TGGTACCCTGAAGATTCTGGGCCTGTTTCCTGTGCATaGACAAGAGGGCCACCATGTATGAAGTTGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WYPEDSGPVSCA*TRGPPCMKLRG Trigger: TCCTCTCAACTTCATACATGGTGGCCCTCTTGTGCATGCACAGGAAACAGGCCCAGAATCTTCAGGGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074881.2 ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||
| CDS GCA 72 bp | AAGAGACCAATGGGCAGGTCAGTGAGTCTGGGCCTGTaGCCACGAAAGAACTTGATGATATGGAAGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KRPMGRSVSLGL*PRKNLMIWKRR Trigger: TCTTCTCTTCCATATCATCAAGTTCTTTCGTGGGCACAGGCCCAGACTCACTGACCTGCCCATTGGTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074881.2 ENSMUST00000227229.2 ENSMUST00000227811.2 ENSMUST00000228680.2 |
||