RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R46 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061653

Ensembl transcript IDs: ENSMUST00000075797.2, ENSMUST00000205088.3, ENSMUST00000226715.2, ENSMUST00000228401.2

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGCTGGCTTACACATTCAGAGGTTCAGTCCATTACTATCAAGGTaGGAGCATGGCAGCATCCAGGCAGGCATGGTGCAGGAGGAGTTG +
Preference number: 1 (lower is better)
Translates to: GAGLHIQRFSPLLSR*EHGSIQAGMVQEEL
Trigger: CAACTCCTCCTGCACCATGCCTGCCTGGATGCTGCCATGCTCCCACCTTGATAGTAATGGACTGAACCTCTGAATGTGTAAGCCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp TGGTGCTGGCTTACAGATTCAGAGTTCAGTCCATTACCATCAAGGTaGGAGCATGGTAGCATCCAGGCAGGCATGGTGCAGGAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: WCWLTDSEFSPLPSR*EHGSIQAGMVQEEL
Trigger: CAGCTCCTCCTGCACCATGCCTGCCTGGATGCTACCATGCTCCCACCTTGATGGTAATGGACTGAACTCTGAATCTGTAAGCCAGCACCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp GGGGCAAAGACAGAGCAGAGAAGGAGGAAAAGGCTAACCAATGACTaGCCCAATTTGATACACACCCTATGGGCAAGAAGAAGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: GAKTEQRRRKRLTND*PNLIHTLWARRSPW
Trigger: CCAAGGACTTCTTCTTGCCCATAGGGTGTGTATCAAATTGGGCCAGTCATTGGTTAGCCTTTTCCTCCTTCTCTGCTCTGTCTTTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp TACAGGGGCAAAGACAGAGCAGAGAAGGAGGAAAAGGCTAACCAATaGCTGGCCCAATTTGATACACACCCTATGGGCAAGAAGAAGTCC +
Preference number: 1 (lower is better)
Translates to: YRGKDRAEKEEKANQ*LAQFDTHPMGKKKS
Trigger: GGACTTCTTCTTGCCCATAGGGTGTGTATCAAATTGGGCCAGTCATTGGTTAGCCTTTTCCTCCTTCTCTGCTCTGTCTTTGCCCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp CATGTCAGAAGAGAAGGGTACAGAAGAAAGGAGGGAGGACTTGTCTaGGGGTGTACTGGGAAGAGAGGAGTGCTTATGTTGGGATGTAAA +
Preference number: 1 (lower is better)
Translates to: HVRREGYRRKEGGLV*GCTGKRGVLMLGCK
Trigger: TTTACATCCCAACATAAGCACTCCTCTCTTCCCAGTACACCCTCAGACAAGTCCTCCCTCCTTTCTTCTGTACCCTTCTCTTCTGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 90 bp CCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATaGAGAAACCCACAGTCAGACATTTCATGGAACTCAAGGAGTCTT +
Preference number: 1 (lower is better)
Translates to: PSKHRMGLPAGNGNR*RNPQSDISWNSRSL
Trigger: AAGACTCCTTGAGTTCCATGAAATGTCTGACTGTGGGTTTCTGCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp TTGATTCCCAGTTGTAGGGGAATGAGGCAGGAGTGGCTTTGTATTTaGGGGAGCACCCTTATAGAAGCAAGAATGAAGGAATGTGGGATA +
Preference number: 1 (lower is better)
Translates to: LIPSCRGMRQEWLCI*GSTLIEARMKECGI
Trigger: TATCCCACATTCCTTCATTCTTGCTTCTATAAGGGTGCTCCCCCAAATACAAAGCCACTCCTGCCTCATTCCCCTACAACTGGGAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp GTAGATGTGCAGCTTGGTCTTAATGTTGGTCCTCCAAGAATTATATaGAGGCTGTCCCTGAACCTGTTGCTTGCATGTGGATTCTCTTCC +
Preference number: 1 (lower is better)
Translates to: VDVQLGLNVGPPRII*RLSLNLLLACGFSS
Trigger: GGAAGAGAATCCACATGCAAGCAACAGGTTCAGGGACAGCCTTCATATAATTCTTGGAGGACCAACATTAAGACCAAGCTGCACATCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 90 bp TCTAAAGCCAGAGCCACATGTCTGAAACTGCAGAATTCTGCTGCTTaGAGGAGCTGGAACATAGAACCCTTGTTCTATTACAGCTTTCTG +
Preference number: 1 (lower is better)
Translates to: SKARATCLKLQNSAA*RSWNIEPLFYYSFL
Trigger: CAGAAAGCTGTAATAGAACAAGGGTTCTATGTTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGTTTCAGACATGTGGCTCTGGCTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp AGAGCCACATGTCTGAAACTGCAGAATTCTGCTGCTTGCAGGAGCTaGAACATAGAACCCTTGTTCTATTACAGCTTTCTGTTCTCCAAC +
Preference number: 1 (lower is better)
Translates to: RATCLKLQNSAACRS*NIEPLFYYSFLFSN
Trigger: GTTGGAGAACAGAAAGCTGTAATAGAACAAGGGTTCTATGTTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGTTTCAGACATGTGGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp CTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAGTCTaGGCCAGAGTATCTGAATGTGGGATAACAACCCATCCCTCCACT +
Preference number: 1 (lower is better)
Translates to: LLHICPRNSFRQQQV*ARVSECGITTHPST
Trigger: AGTGGAGGGATGGGTTGTTATCCCACATTCAGATACTCTGGCCCAGACTTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp CATATAAAGGTTACTAGTGGAAAACTGACTTCCAGGCAACTAGGGTaGGGATCTTATGCACATATCCACAGTGACACACCTACTCCAACC +
Preference number: 1 (lower is better)
Translates to: HIKVTSGKLTSRQLG*GSYAHIHSDTPTPT
Trigger: GGTTGGAGTAGGTGTGTCACTGTGGATATGTGCATAAGATCCTCACCCTAGTTGCCTGGAAGTCAGTTTTCCACTAGTAACCTTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp TGGATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTaGGGGACTAAGGAAACCAACATACCCACAAAATATTCTAACCAT +
Preference number: 1 (lower is better)
Translates to: WIQKWLLLVARKNSK*GTKETNIPTKYSNH
Trigger: ATGGTTAGAATATTTTGTGGGTATGTTGGTTTCCTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp GAGGCTCTTCCAATTGACCTGAGTCCTGTGAGGTGTAAAAAGCCATaGGAACACCACCAGAAGCTCTTTGATACATTTCTCTTTATGAAG +
Preference number: 1 (lower is better)
Translates to: EALPIDLSPVRCKKP*EHHQKLFDTFLFMK
Trigger: CTTCATAAAGAGAAATGTATCAAAGAGCTTCTGGTGGTGTTCTCATGGCTTTTTACACCTCACAGGACTCAGGTCAATTGGAAGAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp ACTCCAACCAGGTCACACTTATTGCAACAAGACTTCACCTCCAAATaGTGCCACACTCTGATCCAAGAATATACAAACCATCACATTCCA +
Preference number: 1 (lower is better)
Translates to: TPTRSHLLQQDFTSK*CHTLIQEYTNHHIP
Trigger: TGGAATGTGATGGTTTGTATATTCTTGGATCAGAGTGTGGCACCATTTGGAGGTGAAGTCTTGTTGCAATAAGTGTGACCTGGTTGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp TTGGTCTTAATGTTGGTCCTCCAAGAATTATATGAAGGCTGTCCCTaGACCTGTTGCTTGCATGTGGATTCTCTTCCTCTAACTGTGTTA +
Preference number: 1 (lower is better)
Translates to: LVLMLVLQELYEGCP*TCCLHVDSLPLTVL
Trigger: TAACACAGTTAGAGGAAGAGAATCCACATGCAAGCAACAGGTTCAGGGACAGCCTTCATATAATTCTTGGAGGACCAACATTAAGACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 90 bp ATCAGCAGCCTACAGATTGGGAAGGATCTTCACCAGCCCTATATCTaGCAGATGGCTGATATCCAAAATTTACAAAGAGCTCAAGAATTT +
Preference number: 1 (lower is better)
Translates to: ISSLQIGKDLHQPYI*QMADIQNLQRAQEF
Trigger: AAATTCTTGAGCTCTTTGTAAATTTTGGATATCAGCCATCTGGCAGATATAGGGCTGGTGAAGATCCTTCCCAATCTGTAGGCTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp AGGATGGAAAGATTCCCTATGCTCATGGATTGGCAGAATATACAGTaGAAATGGCCATCTTACCAAAAATGTTCTGCAGATTCAGTGCCA +
Preference number: 1 (lower is better)
Translates to: RMERFPMLMDWQNIQ*KWPSYQKCSADSVP
Trigger: TGGCACTGAATCTGCAGAACATTTTTGGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATCTTTCCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp GGTAATGGAAAGGAAAGGTTAATAGGGCAAAGGAGGATGTGGAAATaGTTCTTTGTAGTGAATCCAATCTGCATTGTCAGGATATCAGCA +
Preference number: 1 (lower is better)
Translates to: GNGKERLIGQRRMWK*FFVVNPICIVRISA
Trigger: TGCTGATATCCTGACAATGCAGATTGGATTCACTACAAAGAACCATTTCCACATCCTCCTTTGCCCTATTAACCTTTCCTTTCCATTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp ACCAGAGGTAATGGAAAGGAAAGGTTAATAGGGCAAAGGAGGATGTaGAAATGGTTCTTTGTAGTGAATCCAATCTGCATTGTCAGGATA +
Preference number: 1 (lower is better)
Translates to: TRGNGKERLIGQRRM*KWFFVVNPICIVRI
Trigger: TATCCTGACAATGCAGATTGGATTCACTACAAAGAACCATTTCCACATCCTCCTTTGCCCTATTAACCTTTCCTTTCCATTACCTCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp AAACCCAGGATGGCCAAAACAATCCTGAACTACAAAAGGACTTCATaGATAATCACCATCCCTGACCTCAAACTATACTACAGACCAATA +
Preference number: 1 (lower is better)
Translates to: KPRMAKTILNYKRTS*IITIPDLKLYYRPI
Trigger: TATTGGTCTGTAGTATAGTTTGAGGTCAGGGATGGTGATTATTCATGAAGTCCTTTTGTAGTTCAGGATTGTTTTGGCCATCCTGGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp AGTAAGGTAGGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATaGAAATATCCCAATGTAATCTACCATATAAACAAACTGAGAGGA +
Preference number: 1 (lower is better)
Translates to: SKVGFVPEMKGWFNI*KYPNVIYHINKLRG
Trigger: TCCTCTCAGTTTGTTTATATGGTAGATTACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCCTACCTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp ATCATGCACCATAGTAAGGTAGGCTTTGTCCCAGAGATGAAGGGATaGTTCAACATATGGAAATATCCCAATGTAATCTACCATATAAAC +
Preference number: 1 (lower is better)
Translates to: IMHHSKVGFVPEMKG*FNIWKYPNVIYHIN
Trigger: GTTTATATGGTAGATTACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCCTACCTTACTATGGTGCATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp AAAGTATTGGTAAGGGTAAAGTTCATAGAGCTAAGTGCCTTCATATaGAAATTAGAGAATTATTTGGCTGCAGAGATGGCTCAGCAGGTA +
Preference number: 1 (lower is better)
Translates to: KVLVRVKFIELSAFI*KLENYLAAEMAQQV
Trigger: TACCTGCTGAGCCATCTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAACTTTACCCTTACCAATACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp TGTTTTATCTTTACTGTAAATATTACCTGGTTCCTGTCAGTCCTTTaGAGGCATTCCTCTGTTTTGTGTCAGATACTACAATGTACCCTG +
Preference number: 1 (lower is better)
Translates to: CFIFTVNITWFLSVL*RHSSVLCQILQCTL
Trigger: CAGGGTACATTGTAGTATCTGACACAAAACAGAGGAATGCCTTCAAAGGACTGACAGGAACCAGGTAATATTTACAGTAAAGATAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp ATAGCAGACTACATTGCATGTTACAAGAAAGTTGGTGAATTCTTCTaGCAAATGGAGATTCCCCTACAGAAACTTAAAAGAACAGTCAAG +
Preference number: 1 (lower is better)
Translates to: IADYIACYKKVGEFF*QMEIPLQKLKRTVK
Trigger: CTTGACTGTTCTTTTAAGTTTCTGTAGGGGAATCTCCATTTGTCAGAAGAATTCACCAACTTTCTTGTAACATGCAATGTAGTCTGCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 90 bp ACAGAAGGAAATTGTCATATTCATTTCTTGAGGCTGCAGTCACCCTaGTACCTAAACCACACAAACATTCAACAAAGAAAATTACAGATT +
Preference number: 1 (lower is better)
Translates to: TEGNCHIHFLRLQSP*YLNHTNIQQRKLQI
Trigger: AATCTGTAATTTTCTTTGTTGAATGTTTGTGTGGTTTAGGTATCAGGGTGACTGCAGCCTCAAGAAATGAATATGACAATTTCCTTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 90 bp ACTACATTGCATGTTACAAGAAAGTTGGTGAATTCTTCTGACAAATaGAGATTCCCCTACAGAAACTTAAAAGAACAGTCAAGTTACTCT +
Preference number: 1 (lower is better)
Translates to: TTLHVTRKLVNSSDK*RFPYRNLKEQSSYS
Trigger: AGAGTAACTTGACTGTTCTTTTAAGTTTCTGTAGGGGAATCTCCATTTGTCAGAAGAATTCACCAACTTTCTTGTAACATGCAATGTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp AGGTGGGAGCATGGCAGCATCCAGGCAGGCATGGTGCAGGAGGAGTaGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTG +
Preference number: 2 (lower is better)
Translates to: RWEHGSIQAGMVQEE*RVLCLHPKADSGRL
Trigger: CAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAACTCCTCCTGCACCATGCCTGCCTGGATGCTGCCATGCTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp GCCTCGGGTCCTCCCCTTGAGCTAGATCCCAATTTAGGCCTGTCATaGGAACTCCTTTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTA +
Preference number: 2 (lower is better)
Translates to: ASGPPLELDPNLGLS*ELLCLRLFSIFVPV
Trigger: TACGGGGACAAATATGGAGAAGAGCCTGAGGCAAAGGAGTTCCAATGACAGGCCTAAATTGGGATCTAGCTCAAGGGGAGGACCCGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp CACCAACTCCATGCCCACCTATCTGGAATCTTGATTCCCCATAGATaGAGAGAGGCTGACTGGGGCCATTCTATGGCAGCTCACCATGTC +
Preference number: 2 (lower is better)
Translates to: HQLHAHLSGILIPHR*READWGHSMAAHHV
Trigger: GACATGGTGAGCTGCCATAGAATGGCCCCAGTCAGCCTCTCTCAATCTATGGGGAATCAAGATTCCAGATAGGTGGGCATGGAGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGCTGCATCTCCATGGCTaGTGTCAAAGCGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKLHLHG*CQSGLQ
Trigger: CTGAAGACCGCTTTGACATCAGCCATGGAGATGCAG...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCACCTGGAAGCAGTCCTaGGGCAAAGAGTTTCATGGA +
Preference number: 2 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCTWKQS*GKEFHG
Trigger: TCCATGAAACTCTTTGCCTCAGGACTGCTTCCAGGT...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp GAACATACCCACAGTGACACACCTACTCCAACCAGGTCATACCTATaGCAACAAGGCCACACCTCCAAATGCTGCCACACTCTGATCCAA +
Preference number: 2 (lower is better)
Translates to: EHTHSDTPTPTRSYL*QQGHTSKCCHTLIQ
Trigger: TTGGATCAGAGTGTGGCAGCATTTGGAGGTGTGGCCTTGTTGCAATAGGTATGACCTGGTTGGAGTAGGTGTGTCACTGTGGGTATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCTGCTTTCTCCTGGGCTaGTTCTACTCCCTGTTAGTA +
Preference number: 2 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCCFLLG*FYSLLV
Trigger: TACTAACAGGGAGTAGAACCAGCCCAGGAGAAAGCA...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCGGAATGAGGCAGGAGTaGCTTTGTATTTGGGGGAGC +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESGMRQE*LCIWGS
Trigger: GCTCCCCCAAATACAAAGCCACTCCTGCCTCATTCC...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGCTGGTGCTCGCTTTGTaGAAATACAGTCAGATGCAG +
Preference number: 2 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKLVLAL*KYSQMQ
Trigger: CTGCATCTGACTGTATTTTCACAAAGCGAGCACCAG...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCTTCCTGTCAGTCCTTTaGAGGCATTCCTCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCFLSVL*RHSSVL
Trigger: CAAAACAGAGGAATGCCTTCAAAGGACTGACAGGAA...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCAGGCTGCAGTCACCCTaGTACCTAAACCACACAAAC +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESRLQSP*YLNHTN
Trigger: GTTTGTGTGGTTTAGGTATCAGGGTGACTGCAGCCT...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCGAAAATACAGTCAGATaGAGCACTCCCTTGTGTTCG +
Preference number: 2 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCENTVR*STPLCS
Trigger: CGAACACAAGGGAGTGCTGCATCTGACTGTATTTTC...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGACTGCAGAATTCTGCTaGTTGCAGGAGCTGGAACAT +
Preference number: 2 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKTAEFC*LQELEH
Trigger: ATGTTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGT...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCCCATTACTATCAAGGTaGGAGCATGGCAGCATCCAG +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESPLLSR*EHGSIQ
Trigger: CTGGATGCTGCCATGCTCCCACCTTGATAGTAATGG...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCCCAGAGACCATGGATTaGGGAGGCCCCAGGGCATTT +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTPETMD*GGPRAF
Trigger: AAATGCCCTGGGGCCTCCCCAATCCATGGTCTCTGG...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCGTTCCCAAAATGTCATaGTCCATAGCTCTGATGACA +
Preference number: 2 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCVPKMS*SIALMT
Trigger: TGTCATCAGAGCTATGGATCATGACATTTTGGGAAC...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAGTCCTAGACAGTCCTTaGGCTGACTCTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQVLDSP*ADSGLG
Trigger: TCCAAGCCCAGAGTCAGCTCAAGGACTGTCTAGGAC...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTAGTCCTAGACAGTCCTTaGGCTGACTCTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVVLDSP*ADSGLG
Trigger: TCCAAGCCCAGAGTCAGCTCAAGGACTGTCTAGGAC...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCTCCAGGCAACTAGGGTaGGGATCTTATGCACATATC +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESSRQLG*GSYAHI
Trigger: GATATGTGCATAAGATCCTCACCCTAGTTGCCTGGA...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAACCCATCCCTCCACTTaGTGCCCTGTCTTCCTACTG +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQTHPST*CPVFLL
Trigger: CAGTAGGAAGACAGGGCATCAAGTGGAGGGATGGGT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCTCCTTTGAAATCTCTTaGGCCAAGTCAACACAGTTC +
Preference number: 2 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCSFEIS*AKSTQF
Trigger: GAACTGTGTTGACTTGGCCCAAGAGATTTCAAAGGA...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp TTGTTTGTCATTTCTCACCAACTCCATGCCCACCTATCTGGAATCTaGATTCCCCATAGATTGAGAGAGGCTGACTGGGGCCATTCTATG +
Preference number: 2 (lower is better)
Translates to: LFVISHQLHAHLSGI*IPHRLREADWGHSM
Trigger: CATAGAATGGCCCCAGTCAGCCTCTCTCAATCTATGGGGAATCAAGATTCCAGATAGGTGGGCATGGAGTTGGTGAGAAATGACAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp GACTGGTGCTCGCTTTGTGAAAATACAGTCAGATGCAGCACTCCCTaGTGTTCGTATTTGTTTGTCATTTCTCACCAACTCCATGCCCAC +
Preference number: 2 (lower is better)
Translates to: DWCSLCENTVRCSTP*CSYLFVISHQLHAH
Trigger: GTGGGCATGGAGTTGGTGAGAAATGACAAACAAATACGAACACAAGGGAGTGCTGCATCTGACTGTATTTTCACAAAGCGAGCACCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp CCACAGTCAGACATTTCATGGAACTCAAGGAGTCTTATGGGAGAGTaGGATGGAAGATTAAGGGAACAGAAGGACAGGGACACCACAGAA +
Preference number: 2 (lower is better)
Translates to: PQSDISWNSRSLMGE*DGRLREQKDRDTTE
Trigger: TTCTGTGGTGTCCCTGTCCTTCTGTTCCCTTAATCTTCCATCCAACTCTCCCATAAGACTCCTTGAGTTCCATGAAATGTCTGACTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCTTCCTGTCAGTCCTTTaGAGGCATTCCTCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESFLSVL*RHSSVL
Trigger: CAAAACAGAGGAATGCCTTCAAAGGACTGACAGGAA...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAGTCCTAGACAGTCCTTaGGCTGACTCTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQVLDSP*ADSGLG
Trigger: TCCAAGCCCAGAGTCAGCTCAAGGACTGTCTAGGAC...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAACTGCATCTCCATGGCTaGTGTCAAAGCGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQLHLHG*CQSGLQ
Trigger: CTGAAGACCGCTTTGACATCAGCCATGGAGATGCAG...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGGAAAAGGCTAACCAATaGCTGGCCCAATTTGATACA +
Preference number: 2 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKEKANQ*LAQFDT
Trigger: TGTATCAAATTGGGCCAGTCATTGGTTAGCCTTTTC...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAACAGTCATGGGGGAACTaGGAGGGAGATAATGACAGG +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQQSWGN*EGDNDR
Trigger: CCTGTCATTATCTCCCTCTCAGTTCCCCCATGACTG...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCTCAGGCATCTCAGTTTaGCAGATAGAAATCTCAGGG +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESSGISV*QIEISG
Trigger: CCCTGAGATTTCTATCTGGCAAACTGAGATGCCTGA...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCATGCAGAGATCAGCATaGCTATCTCCTCAGATTAAA +
Preference number: 2 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCMQRSA*LSPQIK
Trigger: TTTAATCTGAGGAGATAGGCATGCTGATCTCTGCAT...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGTTGAGAGAGGCTGACTaGGGCCATTCTATGGCAGCT +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLLREAD*GHSMAA
Trigger: AGCTGCCATAGAATGGCCCCAGTCAGCCTCTCTCAA...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTATTGAGAGAGGCTGACTaGGGCCATTCTATGGCAGCT +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVLREAD*GHSMAA
Trigger: AGCTGCCATAGAATGGCCCCAGTCAGCCTCTCTCAA...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCGGATCTAAATTTAGATaGGTAAGATCTTGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCGSKFR*VRSCPK
Trigger: CTTGGGGCAAGATCTTACCCATCTAAATTTAGATCC...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCAGGCTAACCAATGACTaGCCCAATTTGATACACACC +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESRLTND*PNLIHT
Trigger: GGTGTGTATCAAATTGGGCCAGTCATTGGTTAGCCT...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAACCAGAGACCATGGATTaGGGAGGCCCCAGGGCATTT +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKPETMD*GGPRAF
Trigger: AAATGCCCTGGGGCCTCCCCAATCCATGGTCTCTGG...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCGAAATGCATCAGTGTTaGCAATTAGTAATCAGGCAT +
Preference number: 2 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCEMHQC*QLVIRH
Trigger: ATGCCTGATTACTAATTGTCAACACTGATGCATTTC...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCAGACAGTCCTTGAGCTaGCTCTGGGCTTGGATTTTG +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTRQSLS*LWAWIL
Trigger: CAAAATCCAAGCCCAGAGTCAGCTCAAGGACTGTCT...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGCCAGAGCCACATGTCTaGAACTGCAGAATTCTGCTG +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLPEPHV*NCRILL
Trigger: CAGCAGAATTCTGCAGTTTCAGACATGTGGCTCTGG...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCTGTGAACAGACACCATaGCCAAGGCAAGTCTTATAT +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESCEQTP*PRQVLY
Trigger: ATATAAGACTTGCCTTGGTCATGGTGTCTGTTCACA...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTATATGAAGGCTGTCCCTaGACCTGTTGCTTGCATGTG +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVYEGCP*TCCLHV
Trigger: CACATGCAAGCAACAGGTTCAGGGACAGCCTTCATA...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCGAGGTGACAACTTCCTaGACAGAATACAATGGGTTA +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESEVTTS*TEYNGL
Trigger: TAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTC...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAAAGACTGCCTGGTCTTaGCACAGTGAGAGAAGACAC +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQKTAWS*HSERRH
Trigger: GTGTCTTCTCTCACTGTGGCAAGACCAGGCAGTCTT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTGACTTCCAGGTGTCTGAGGGTGTACTaGGAAGAGAGGAGTGCTTAT +
Preference number: 2 (lower is better)
Translates to: LRVLCLHPKADSGRLTSRCLRVY*EERSAY
Trigger: ATAAGCACTCCTCTCTTCCCAGTACACCCTCAGACA...CCTGGAAGTCAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAACTGGGGCCATTCTATaGCAGCTCACCATGTCAGAA +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQTGAIL*QLTMSE
Trigger: TTCTGACATGGTGAGCTGCCATAGAATGGCCCCAGT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCCCATTACTATCAAGGTaGGAGCATGGCAGCATCCAG +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTPLLSR*EHGSIQ
Trigger: CTGGATGCTGCCATGCTCCCACCTTGATAGTAATGG...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTACAAACTGCTTTCTCCTaGGCTGGTTCTACTCCCTGT +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVQTAFS*AGSTPC
Trigger: ACAGGGAGTAGAACCAGCCCAGGAGAAAGCAGTTTG...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCCAAACTGCTTTCTCCTaGGCTGGTTCTACTCCCTGT +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTQTAFS*AGSTPC
Trigger: ACAGGGAGTAGAACCAGCCCAGGAGAAAGCAGTTTG...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGAGGCAAAGAGTTTCATaGAAACTTAGCTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKRQRVS*KLSFLE
Trigger: TTCCAGGAAGCTAAGTTTCCATGAAACTCTTTGCCT...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAACCCAGGGCATTTCTGTaGGCAACTCTAGGTGAGACT +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQPRAFL*ATLGET
Trigger: AGTCTCACCTAGAGTTGCCCACAGAAATGCCCTGGG...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCCCAGGGCATTTCTGTaGGCAACTCTAGGTGAGACT +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDPRAFL*ATLGET
Trigger: AGTCTCACCTAGAGTTGCCCACAGAAATGCCCTGGG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAACAGCAGCCTACAGATTaGGAAGGATCTTCACCAGCC +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQQQPTD*EGSSPA
Trigger: GGCTGGTGAAGATCCTTCCCAATCTGTAGGCTGCTG...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCAGCAGCCTACAGATTaGGAAGGATCTTCACCAGCC +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDQQPTD*EGSSPA
Trigger: GGCTGGTGAAGATCCTTCCCAATCTGTAGGCTGCTG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAACTGGTGCTCGCTTTGTaGAAATACAGTCAGATGCAG +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQLVLAL*KYSQMQ
Trigger: CTGCATCTGACTGTATTTTCACAAAGCGAGCACCAG...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGGAAATGCATCAGTGTTaGCAATTAGTAATCAGGCAT +
Preference number: 2 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKEMHQC*QLVIRH
Trigger: ATGCCTGATTACTAATTGTCAACACTGATGCATTTC...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCCAGAGCCACATGTCTaGAACTGCAGAATTCTGCTG +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDPEPHV*NCRILL
Trigger: CAGCAGAATTCTGCAGTTTCAGACATGTGGCTCTGG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTACCTGGAAGCAGTCCTaGGGCAAAGAGTTTCATGGA +
Preference number: 2 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTTWKQS*GKEFHG
Trigger: TCCATGAAACTCTTTGCCTCAGGACTGCTTCCAGGT...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACTATGAAGGCTGTCCCTaGACCTGTTGCTTGCATGTG +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDYEGCP*TCCLHV
Trigger: CACATGCAAGCAACAGGTTCAGGGACAGCCTTCATA...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCTGGCCAAAACAATCCTaGACTACAAAAGGACTTCAT +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESWPKQS*TTKGLH
Trigger: ATGAAGTCCTTTTGTAGTTCAGGATTGTTTTGGCCA...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp TTGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTGACTTCCAGGTTCTCACCAACTCCATaGCCACCTATCTGGAATCTT +
Preference number: 2 (lower is better)
Translates to: LRVLCLHPKADSGRLTSRFSPTP*PPIWNL
Trigger: AAGATTCCAGATAGGTGGGCATGGAGTTGGTGAGAA...CCTGGAAGTCAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTTTGACCGCAACAAACTaGTTTCTCCTGGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTLTATN*FLLGWF
Trigger: GAACCAGCCCAGGAGAAAGCAGTTTGTTGCGGTCAA...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGCCTGAACCTGTTGCTTaGATGTGGATTCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLPEPVA*MWILFL
Trigger: GAGGAAGAGAATCCACATGCAAGCAACAGGTTCAGG...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTACCTGAACCTGTTGCTTaGATGTGGATTCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVPEPVA*MWILFL
Trigger: GAGGAAGAGAATCCACATGCAAGCAACAGGTTCAGG...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCGGCAATGGAAACAGATaGAGAAACCCACAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTGNGNR*RNPQSD
Trigger: GTCTGACTGTGGGTTTCTGCATCTGTTTCCATTGCC...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTAGGCATTTCTAGAACATaGCAGAGACCATGGATTGGG +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVGISRT*QRPWIG
Trigger: CCCAATCCATGGTCTCTGGCATGTTCTAGAAATGCC...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAATGTCTGAGGGTGTACTaGGAAGAGAGGAGTGCTTAT +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQCLRVY*EERSAY
Trigger: ATAAGCACTCCTCTCTTCCCAGTACACCCTCAGACA...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAACTGGGGCCATTCTATaGCAGCTCACCATGTCAGAA +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQTGAIL*QLTMSE
Trigger: TTCTGACATGGTGAGCTGCCATAGAATGGCCCCAGT...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATTGAGAGAGGCTGACTaGGGCCATTCTATGGCAGCT +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKLREAD*GHSMAA
Trigger: AGCTGCCATAGAATGGCCCCAGTCAGCCTCTCTCAA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCCATTACTATCAAGGTaGGAGCATGGCAGCATCCAG +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDPLLSR*EHGSIQ
Trigger: CTGGATGCTGCCATGCTCCCACCTTGATAGTAATGG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCTGCTTTCTCCTGGGCTaGTTCTACTCCCTGTTAGTA +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTCFLLG*FYSLLV
Trigger: TACTAACAGGGAGTAGAACCAGCCCAGGAGAAAGCA...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAACAAACTGCTTTCTCCTaGGCTGGTTCTACTCCCTGT +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQQTAFS*AGSTPC
Trigger: ACAGGGAGTAGAACCAGCCCAGGAGAAAGCAGTTTG...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCAACTCTGCATCTCCATaGCTGATGTCAAAGCGGTCT +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTNSASP*LMSKRS
Trigger: AGACCGCTTTGACATCAGCCATGGAGATGCAGAGTT...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGTCTTCCAGCAGGCAATaGAAACAGATGCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLSSSRQ*KQMQKP
Trigger: GGGTTTCTGCATCTGTTTCCATTGCCTGCTGGAAGA...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAAGGAAGAACTCCAAGTaGGGGACTAAGGAAACCAAC +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQRKNSK*GTKETN
Trigger: GTTGGTTTCCTTAGTCCCCCACTTGGAGTTCTTCCT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCAATAGATATTGGAGGTaGATTCAGAGAGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESNRYWR*IQRGNW
Trigger: CCAGTTTCCTCTCTGAATCCACCTCCAATATCTATT...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCGCTCCAAATTCTATATaGAAACAGAGACTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESAPNSI*KQRLEC
Trigger: ACACTCCAGTCTCTGTTTCCATATAGAATTTGGAGC...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTGACTTCCAGGGTTCCCAAAATGTCATaGTCCATAGCTCTGATGACA +
Preference number: 2 (lower is better)
Translates to: LRVLCLHPKADSGRLTSRVPKMS*SIALMT
Trigger: TGTCATCAGAGCTATGGATCATGACATTTTGGGAAC...CCTGGAAGTCAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCTGGTGCTCGCTTTGTaGAAATACAGTCAGATGCAG +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDLVLAL*KYSQMQ
Trigger: CTGCATCTGACTGTATTTTCACAAAGCGAGCACCAG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAAGACAGTCCTTGAGCTaGCTCTGGGCTTGGATTTTG +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKRQSLS*LWAWIL
Trigger: CAAAATCCAAGCCCAGAGTCAGCTCAAGGACTGTCT...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGAGGGTTTTACTGCTGTaGACAGACACCAAGATCAAG +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLRVLLL*TDTKIK
Trigger: CTTGATCTTGGTGTCTGTTCACAGCAGTAAAACCCT...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTAAGGGTTTTACTGCTGTaGACAGACACCAAGATCAAG +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVRVLLL*TDTKIK
Trigger: CTTGATCTTGGTGTCTGTTCACAGCAGTAAAACCCT...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAAGGGTTTTACTGCTGTaGACAGACACCAAGATCAAG +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQRVLLL*TDTKIK
Trigger: CTTGATCTTGGTGTCTGTTCACAGCAGTAAAACCCT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCCTTTTATATCTTTGTTaGCCGCAACAAACTGCTTTC +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESLLYLC*PQQTAF
Trigger: GAAAGCAGTTTGTTGCGGTCAACAAAGATATAAAAG...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGCTGCATCTCCATGGCTaGTGTCAAAGCGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAELHLHG*CQSGLQ
Trigger: CTGAAGACCGCTTTGACATCAGCCATGGAGATGCAG...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACTCCAGGCAACTAGGGTaGGGATCTTATGCACATATC +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDSRQLG*GSYAHI
Trigger: GATATGTGCATAAGATCCTCACCCTAGTTGCCTGGA...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATATGAAGGCTGTCCCTaGACCTGTTGCTTGCATGTG +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKYEGCP*TCCLHV
Trigger: CACATGCAAGCAACAGGTTCAGGGACAGCCTTCATA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGGCTTTGTCCCAGAGATaGAGGGATGGTTCAACATAT +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLALSQR*RDGSTY
Trigger: ATATGTTGAACCATCCCTTCATCTCTGGGACAAAGC...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAGCTTTGTCCCAGAGATaGAGGGATGGTTCAACATAT +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQALSQR*RDGSTY
Trigger: ATATGTTGAACCATCCCTTCATCTCTGGGACAAAGC...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCTTCTCACCAACTCCATaGCCACCTATCTGGAATCTT +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTFSPTP*PPIWNL
Trigger: AAGATTCCAGATAGGTGGGCATGGAGTTGGTGAGAA...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCGAAAATACAGTCAGATaGAGCACTCCCTTGTGTTCG +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTENTVR*STPLCS
Trigger: CGAACACAAGGGAGTGCTGCATCTGACTGTATTTTC...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCCAAGTTACTCTCATATaGAAGTATTTACCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESQVTLI*KYLPRP
Trigger: AGGCCTTGGTAAATACTTGCATATGAGAGTAACTTG...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTATCAGGCATCTCAGTTTaGCAGATAGAAATCTCAGGG +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVSGISV*QIEISG
Trigger: CCCTGAGATTTCTATCTGGCAAACTGAGATGCCTGA...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGTTTAAAGCATTCCACTaGTTTCCAAATCCAAATTCC +
Preference number: 2 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKFKAFH*FPNPNS
Trigger: GGAATTTGGATTTGGAAAGCAGTGGAATGCTTTAAA...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAACTGCAGAATTCTGCTaGTTGCAGGAGCTGGAACAT +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQTAEFC*LQELEH
Trigger: ATGTTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGT...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAGAAACTGCAGAATTCTaGTGCTTGCAGGAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQETAEF*CLQELE
Trigger: TTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGTTTC...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCGCAAATTCCAAACTCTaGATCTCCATGGCTGATGTC +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTANSKL*ISMADV
Trigger: GACATCAGCCATGGAGATGCAGAGTTTGGAATTTGC...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGGCAAATTCCAAACTCTaGATCTCCATGGCTGATGTC +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLANSKL*ISMADV
Trigger: GACATCAGCCATGGAGATGCAGAGTTTGGAATTTGC...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCCTGAACCTGTTGCTTaGATGTGGATTCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDPEPVA*MWILFL
Trigger: GAGGAAGAGAATCCACATGCAAGCAACAGGTTCAGG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCTTTCAAATAAAAGCATaGTCAGGCCTATCACAGCAA +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESFQIKA*SGLSQQ
Trigger: TTGCTGTGATAGGCCTGACCATGCTTTTATTTGAAA...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTTCTTCCAGCAGGCAATaGAAACAGATGCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTSSSRQ*KQMQKP
Trigger: GGGTTTCTGCATCTGTTTCCATTGCCTGCTGGAAGA...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCAAAAGTATCAGAGGATaGAAAGATTCCCTATGCTCA +
Preference number: 2 (lower is better)
Translates to: RLALSGINERKSPWSCESKSIRG*KDSLCS
Trigger: TGAGCATAGGGAATCTTTCCATCCTCTGATACTTTT...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGAGACAGCAACAAGTCTaGGCCAGAGTATCTGAATGT +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLRQQQV*ARVSEC
Trigger: ACATTCAGATACTCTGGCCCAGACTTGTTGCTGTCT...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACTTCCTGTCAGTCCTTTaGAGGCATTCCTCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDFLSVL*RHSSVL
Trigger: CAAAACAGAGGAATGCCTTCAAAGGACTGACAGGAA...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGAGACAGTCCTTGAGCTaGCTCTGGGCTTGGATTTTG +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAERQSLS*LWAWIL
Trigger: CAAAATCCAAGCCCAGAGTCAGCTCAAGGACTGTCT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATCCAGGCAACTAGGGTaGGGATCTTATGCACATATC +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKSRQLG*GSYAHI
Trigger: GATATGTGCATAAGATCCTCACCCTAGTTGCCTGGA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGGAAAAGGCTAACCAATaGCTGGCCCAATTTGATACA +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLEKANQ*LAQFDT
Trigger: TGTATCAAATTGGGCCAGTCATTGGTTAGCCTTTTC...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAGTTATCTCGAATGGCTaGGAACCACTTGAAGAAATG +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQVISNG*EPLEEM
Trigger: CATTTCTTCAAGTGGTTCTCAGCCATTCGAGATAAC...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAATGTAGCCTCGTTGTTTaGAGAGTACACTGTATCTTC +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQCSLVV*RVHCIF
Trigger: GAAGATACAGTGTACTCTTCAAACAACGAGGCTACA...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGATTCCAGCCCTCATGTaGCAACTGAAAACTGTCTAT +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLIPALM*QLKTVY
Trigger: ATAGACAGTTTTCAGTTGTCACATGAGGGCTGGAAT...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAGAAACTGCAGAATTCTaGTGCTTGCAGGAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKETAEF*CLQELE
Trigger: TTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGTTTC...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGTTGACCGCAACAAACTaGTTTCTCCTGGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAELTATN*FLLGWF
Trigger: GAACCAGCCCAGGAGAAAGCAGTTTGTTGCGGTCAA...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACGCAAATTCCAAACTCTaGATCTCCATGGCTGATGTC +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDANSKL*ISMADV
Trigger: GACATCAGCCATGGAGATGCAGAGTTTGGAATTTGC...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAGGCAATGGAAACAGATaGAGAAACCCACAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKGNGNR*RNPQSD
Trigger: GTCTGACTGTGGGTTTCTGCATCTGTTTCCATTGCC...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCTCCTTTGAAATCTCTTaGGCCAAGTCAACACAGTTC +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTSFEIS*AKSTQF
Trigger: GAACTGTGTTGACTTGGCCCAAGAGATTTCAAAGGA...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCGGAAACTTAGCTTCCTaGAACCTTGGCATTCTCAAT +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTGNLAS*NLGILN
Trigger: ATTGAGAATGCCAAGGTTCCAGGAAGCTAAGTTTCC...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAAGGAAGAACTCCAAGTaGGGGACTAAGGAAACCAAC +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKRKNSK*GTKETN
Trigger: GTTGGTTTCCTTAGTCCCCCACTTGGAGTTCTTCCT...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGGGGCCTAAGAGAGAATaGTTGTATCTTTCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLGPKRE*LYLSQK
Trigger: CTTCTGAGAAAGATACAACCATTCTCTCTTAGGCCC...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAATACTGGCAAGGATGTaGAGCAAGAGGAACACTTCT +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQILARM*SKRNTS
Trigger: AGAAGTGTTCCTCTTGCTCCACATCCTTGCCAGTAT...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGAAAATCAGCACATACTaGCAAGGATGTGGAGCAAGA +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLKISTY*QGCGAR
Trigger: TCTTGCTCCACATCCTTGCCAGTATGTGCTGATTTT...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCAAAATCAGCACATACTaGCAAGGATGTGGAGCAAGA +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTKISTY*QGCGAR
Trigger: TCTTGCTCCACATCCTTGCCAGTATGTGCTGATTTT...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTACAAGACACCATCAAATaGACAAATCAGCAGCCTACA +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVQDTIK*TNQQPT
Trigger: TGTAGGCTGCTGATTTGTCCATTTGATGGTGTCTTG...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTGACTTCCAGGCTGATGACAACATACTaGATTATATTCAGGGTCCAT +
Preference number: 2 (lower is better)
Translates to: LRVLCLHPKADSGRLTSRLMTTY*IIFRVH
Trigger: ATGGACCCTGAATATAATTCAGTATGTTGTCATCAG...CCTGGAAGTCAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACGTTGGTGAATTCTTCTaGCAAATGGAGATTCCCCTA +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDVGEFF*QMEIPL
Trigger: TAGGGGAATCTCCATTTGTCAGAAGAATTCACCAAC...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTGTTGGTGAATTCTTCTaGCAAATGGAGATTCCCCTA +
Preference number: 2 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTVGEFF*QMEIPL
Trigger: TAGGGGAATCTCCATTTGTCAGAAGAATTCACCAAC...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTGACTTCCAGGGAAATGCATCAGTGTTaGCAATTAGTAATCAGGCAT +
Preference number: 2 (lower is better)
Translates to: LRVLCLHPKADSGRLTSREMHQC*QLVIRH
Trigger: ATGCCTGATTACTAATTGTCAACACTGATGCATTTC...CCTGGAAGTCAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAATGGCTGAGAACCACTTaGAGAAATGTTTATAGTCCT +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQWLRTT*RNVYSP
Trigger: AGGACTATAAACATTTCTTCAAGTGGTTCTCAGCCA...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAGTTATCTCGAATGGCTaGGAACCACTTGAAGAAATG +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQVISNG*EPLEEM
Trigger: CATTTCTTCAAGTGGTTCTCAGCCATTCGAGATAAC...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACGAGGTGACAACTTCCTaGACAGAATACAATGGGTTA +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDEVTTS*TEYNGL
Trigger: TAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTC...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCTACAAAAGGACTTCATaGATAATCACCATCCCTGAC +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTYKRTS*IITIPD
Trigger: GTCAGGGATGGTGATTATTCATGAAGTCCTTTTGTA...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAATGGCCAAAACAATCCTaGACTACAAAAGGACTTCAT +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQWPKQS*TTKGLH
Trigger: ATGAAGTCCTTTTGTAGTTCAGGATTGTTTTGGCCA...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATTCTCACCAACTCCATaGCCACCTATCTGGAATCTT +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKFSPTP*PPIWNL
Trigger: AAGATTCCAGATAGGTGGGCATGGAGTTGGTGAGAA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAATGTATACTCAAATTCTaGCCTTGCATTAGTCGGGTG +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQCILKF*PCISRV
Trigger: CACCCGACTAATGCAAGGGCAGAATTTGAGTATACA...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTAGGACATCATGAACTTTaGAGGCAAATGAACAGAACT +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVGHHEL*RQMNRT
Trigger: AGTTCTGTTCATTTGCCTGCAAAGTTCATGATGTCC...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGTGTCTGAGGGTGTACTaGGAAGAGAGGAGTGCTTAT +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAECLRVY*EERSAY
Trigger: ATAAGCACTCCTCTCTTCCCAGTACACCCTCAGACA...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTAGGATCTAAATTTAGATaGGTAAGATCTTGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVGSKFR*VRSCPK
Trigger: CTTGGGGCAAGATCTTACCCATCTAAATTTAGATCC...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGAACTCTGCATCTCCATaGCTGATGTCAAAGCGGTCT +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAENSASP*LMSKRS
Trigger: AGACCGCTTTGACATCAGCCATGGAGATGCAGAGTT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAAGGCAAAGAGTTTCATaGAAACTTAGCTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQRQRVS*KLSFLE
Trigger: TTCCAGGAAGCTAAGTTTCCATGAAACTCTTTGCCT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGAGGAAGAACTCCAAGTaGGGGACTAAGGAAACCAAC +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAERKNSK*GTKETN
Trigger: GTTGGTTTCCTTAGTCCCCCACTTGGAGTTCTTCCT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAATACTGGCAAGGATGTaGAGCAAGAGGAACACTTCT +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKILARM*SKRNTS
Trigger: AGAAGTGTTCCTCTTGCTCCACATCCTTGCCAGTAT...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAACAAGACACCATCAAATaGACAAATCAGCAGCCTACA +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQQDTIK*TNQQPT
Trigger: TGTAGGCTGCTGATTTGTCCATTTGATGGTGTCTTG...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGGCTCCAAATTCTATATaGAAACAGAGACTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLAPNSI*KQRLEC
Trigger: ACACTCCAGTCTCTGTTTCCATATAGAATTTGGAGC...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTACTTTTATATCTTTGTTaGCCGCAACAAACTGCTTTC +
Preference number: 2 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVLLYLC*PQQTAF
Trigger: GAAAGCAGTTTGTTGCGGTCAACAAAGATATAAAAG...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATGTGAACAGACACCATaGCCAAGGCAAGTCTTATAT +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKCEQTP*PRQVLY
Trigger: ATATAAGACTTGCCTTGGTCATGGTGTCTGTTCACA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCCCTCATGTGACAACTaGAAACTGTCTATAACTTCA +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDPSCDN*KLSITS
Trigger: TGAAGTTATAGACAGTTTTCAGTTGTCACATGAGGG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGCCACCAGAAGCTCTTTaGTACATTTCTCTTTATGAA +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLPPEAL*YISLYE
Trigger: TTCATAAAGAGAAATGTATCAAAGAGCTTCTGGTGG...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGCAAGTTACTCTCATATaGAAGTATTTACCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLQVTLI*KYLPRP
Trigger: AGGCCTTGGTAAATACTTGCATATGAGAGTAACTTG...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATGTATACTCAAATTCTaGCCTTGCATTAGTCGGGTG +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKCILKF*PCISRV
Trigger: CACCCGACTAATGCAAGGGCAGAATTTGAGTATACA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTGGACATCATGAACTTTaGAGGCAAATGAACAGAACT +
Preference number: 2 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTGHHEL*RQMNRT
Trigger: AGTTCTGTTCATTTGCCTGCAAAGTTCATGATGTCC...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAGGAAACTTAGCTTCCTaGAACCTTGGCATTCTCAAT +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKGNLAS*NLGILN
Trigger: ATTGAGAATGCCAAGGTTCCAGGAAGCTAAGTTTCC...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACAGGCAAAGAGTTTCATaGAAACTTAGCTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDRQRVS*KLSFLE
Trigger: TTCCAGGAAGCTAAGTTTCCATGAAACTCTTTGCCT...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGAGGCTAACCAATGACTaGCCCAATTTGATACACACC +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAERLTND*PNLIHT
Trigger: GGTGTGTATCAAATTGGGCCAGTCATTGGTTAGCCT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGATTTGGATCCAGAAGTaGCTACTTCTTGTAGCCAGG +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAEIWIQK*LLLVAR
Trigger: CCTGGCTACAAGAAGTAGCCACTTCTGGATCCAAAT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACAATAGATATTGGAGGTaGATTCAGAGAGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDNRYWR*IQRGNW
Trigger: CCAGTTTCCTCTCTGAATCCACCTCCAATATCTATT...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAAAAAGTATCAGAGGATaGAAAGATTCCCTATGCTCA +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQKSIRG*KDSLCS
Trigger: TGAGCATAGGGAATCTTTCCATCCTCTGATACTTTT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAACTGATGACAACATACTaGATTATATTCAGGGTCCAT +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQLMTTY*IIFRVH
Trigger: ATGGACCCTGAATATAATTCAGTATGTTGTCATCAG...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAACTTTTATATCTTTGTTaGCCGCAACAAACTGCTTTC +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQLLYLC*PQQTAF
Trigger: GAAAGCAGTTTGTTGCGGTCAACAAAGATATAAAAG...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATGGCTGAGAACCACTTaGAGAAATGTTTATAGTCCT +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKWLRTT*RNVYSP
Trigger: AGGACTATAAACATTTCTTCAAGTGGTTCTCAGCCA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGGTTATCTCGAATGGCTaGGAACCACTTGAAGAAATG +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAEVISNG*EPLEEM
Trigger: CATTTCTTCAAGTGGTTCTCAGCCATTCGAGATAAC...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAATATCTGCCAGATGGCTaGTATCCAAAATTTACAAAG +
Preference number: 2 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQYLPDG*YPKFTK
Trigger: CTTTGTAAATTTTGGATATCAGCCATCTGGCAGATA...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCATTCAAGGAAAAGGTaGTACCAATATTCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDHSRKR*YQYSSN
Trigger: GTTTGAGGAATATTGGTATCACCTTTTCCTTGAATG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCTTTAAAGCATTCCACTaGTTTCCAAATCCAAATTCC +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTFKAFH*FPNPNS
Trigger: GGAATTTGGATTTGGAAAGCAGTGGAATGCTTTAAA...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCCCCCATAAAGACACTTaGTCAATTAATTTCCAATCA +
Preference number: 2 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTPHKDT*SINFQS
Trigger: TGATTGGAAATTAATTGAGCAAGTGTCTTTATGGGG...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAAAAACAACATTTAACTaGTGCTGGCTTACAGATTCA +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQKTTFN*CWLTDS
Trigger: TGAATCTGTAAGCCAGCACCAGTTAAATGTTGTTTT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGGGGCCTAAGAGAGAATaGTTGTATCTTTCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAEGPKRE*LYLSQK
Trigger: CTTCTGAGAAAGATACAACCATTCTCTCTTAGGCCC...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTGTAAAAGCCAGAAAATaGAAATGTAGATGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTVKARK*KCRCPS
Trigger: TGAGGGACATCTACATTTCCATTTTCTGGCTTTTAC...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGAAAATCAGCACATACTaGCAAGGATGTGGAGCAAGA +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAEKISTY*QGCGAR
Trigger: TCTTGCTCCACATCCTTGCCAGTATGTGCTGATTTT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGGGATGGTTCAACATATaGAAATATCCCAATGTAATC +
Preference number: 2 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLGWFNI*KYPNVI
Trigger: GATTACATTGGGATATTTCCATATGTTGAACCATCC...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCCAGAGATGAAGGGATaGTTCAACATATGGAAATAT +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDPEMKG*FNIWKY
Trigger: ATATTTCCATATGTTGAACCATCCCTTCATCTCTGG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAATATTTATCCAAGTATTaGTGGTGCATGCCTTTAATC +
Preference number: 2 (lower is better)
Translates to: LPQALLHICPRNSFRQQQYLSKY*WCMPLI
Trigger: GATTAAAGGCATGCACCACCAATACTTGGATAAATA...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp CTGTTTTATCTTTACTGTAAATATTACCTGGTTCCTGTCAGTCCTTaGAAGGCATTCCTCTGTTTTGTGTCAGATACTACAATGTACCCT +
Preference number: 2 (lower is better)
Translates to: LFYLYCKYYLVPVSP*KAFLCFVSDTTMYP
Trigger: AGGGTACATTGTAGTATCTGACACAAAACAGAGGAATGCCTTCAAAGGACTGACAGGAACCAGGTAATATTTACAGTAAAGATAAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp TACTGCATGATAATAATACAGACACAGGCTGGTTGTTCAATGGAATaGAATCAAAGACCCAGGAATAAACCAACAGACCTATGGAAGATT +
Preference number: 2 (lower is better)
Translates to: YCMIIIQTQAGCSME*NQRPRNKPTDLWKI
Trigger: AATCTTCCATAGGTCTGTTGGTTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTATTATTATCATGCAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAACTGATGACAACATACTaGATTATATTCAGGGTCCAT +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKLMTTY*IIFRVH
Trigger: ATGGACCCTGAATATAATTCAGTATGTTGTCATCAG...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATATCTGCCAGATGGCTaGTATCCAAAATTTACAAAG +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKYLPDG*YPKFTK
Trigger: CTTTGTAAATTTTGGATATCAGCCATCTGGCAGATA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAACAAGTTACTCTCATATaGAAGTATTTACCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKQVTLI*KYLPRP
Trigger: AGGCCTTGGTAAATACTTGCATATGAGAGTAACTTG...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR GCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTTTTAAAGCATTCCACTaGTTTCCAAATCCAAATTCC +
Preference number: 2 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTFKAFH*FPNPNS
Trigger: GGAATTTGGATTTGGAAAGCAGTGGAATGCTTTAAA...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAAATTCTTCTGACAAATaGAGATTCCCCTACAGAAAC +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKNSSDK*RFPYRN
Trigger: GTTTCTGTAGGGGAATCTCCATTTGTCAGAAGAATT...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATTTCAAATAAAAGCATaGTCAGGCCTATCACAGCAA +
Preference number: 2 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKFQIKA*SGLSQQ
Trigger: TTGCTGTGATAGGCCTGACCATGCTTTTATTTGAAA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACAAAACAACATTTAACTaGTGCTGGCTTACAGATTCA +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDKTTFN*CWLTDS
Trigger: TGAATCTGTAAGCCAGCACCAGTTAAATGTTGTTTT...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACGGATGGTTCAACATATaGAAATATCCCAATGTAATC +
Preference number: 2 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDGWFNI*KYPNVI
Trigger: GATTACATTGGGATATTTCCATATGTTGAACCATCC...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGGTTCAAGATCTCTTCTaGGATTCATCCAATCACTTA +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAEVQDLF*DSSNHL
Trigger: TAAGTGATTGGATGAATCTCAGAAGAGATCTTGAAC...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGAAGAACACATCAAAATaGTCATGCACCATAGTAAGG +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAEKNTSK*SCTIVR
Trigger: CCTTACTATGGTGCATGATCATTTTGATGTGTTCTT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR TCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGCATTCAAGGAAAAGGTaGTACCAATATTCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAEHSRKR*YQYSSN
Trigger: GTTTGAGGAATATTGGTATCACCTTTTCCTTGAATG...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGAATTCTTCTGACAAATaGAGATTCCCCTACAGAAAC +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAENSSDK*RFPYRN
Trigger: GTTTCTGTAGGGGAATCTCCATTTGTCAGAAGAATT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGGTAAAAGCCAGAAAATaGAAATGTAGATGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAEVKARK*KCRCPS
Trigger: TGAGGGACATCTACATTTCCATTTTCTGGCTTTTAC...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGCCAGAGATGAAGGGATaGTTCAACATATGGAAATAT +
Preference number: 2 (lower is better)
Translates to: FIELSAFIWKLENYLAAEPEMKG*FNIWKY
Trigger: ATATTTCCATATGTTGAACCATCCCTTCATCTCTGG...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 90 bp GTGTGGCAAGGCAAACCAATAGCAGAAAGCATCATCTACTGGCTATaGAGTTATATTTATACCAATTCAAAACATCATATGTTCTACCAA +
Preference number: 2 (lower is better)
Translates to: VWQGKPIAESIIYWL*SYIYTNSKHHMFYQ
Trigger: TTGGTAGAACATATGATGTTTTGAATTGGTATAAATATAACTCAATAGCCAGTAGATGATGCTTTCTGCTATTGGTTTGCCTTGCCACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp TCAGAGGTTCAGTCCATTACTATCAAGGTGGGAGCATaGCAGCATCCAGGCAGGCATGGTGCAGGAGGAGTT +
Preference number: 3 (lower is better)
Translates to: SEVQSITIKVGA*QHPGRHGAGGV
Trigger: AACTCCTCCTGCACCATGCCTGCCTGGATGCTGCCATGCTCCCACCTTGATAGTAATGGACTGAACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGGCCAGAGACCATGGATaGGGGAGGCCCCAGGGCATT +
Preference number: 3 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLARDHG*GRPQGI
Trigger: AATGCCCTGGGGCCTCCCCAATCCATGGTCTCTGGC...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp ATGGCAGCATCCAGGCAGGCATGGTGCAGGAGGAGTTaGGAGTTCTATGTCTTCATCCAAAGGCTGATAGTG +
Preference number: 3 (lower is better)
Translates to: MAASRQAWCRRS*EFYVFIQRLIV
Trigger: CACTATCAGCCTTTGGATGAAGACATAGAACTCTCAACTCCTCCTGCACCATGCCTGCCTGGATGCTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp TTACACATTCAGAGGTTCAGTCCATTACTATCAAGGTaGGAGCATGGCAGCATCCAGGCAGGCATGGTGCAG +
Preference number: 3 (lower is better)
Translates to: LHIQRFSPLLSR*EHGSIQAGMVQ
Trigger: CTGCACCATGCCTGCCTGGATGCTGCCATGCTCCCACCTTGATAGTAATGGACTGAACCTCTGAATGTGTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp CTTACAGATTCAGAGTTCAGTCCATTACCATCAAGGTaGGAGCATGGTAGCATCCAGGCAGGCATGGTGCAG +
Preference number: 3 (lower is better)
Translates to: LTDSEFSPLPSR*EHGSIQAGMVQ
Trigger: CTGCACCATGCCTGCCTGGATGCTACCATGCTCCCACCTTGATGGTAATGGACTGAACTCTGAATCTGTAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGTGGCTGCTCTGGATCTaGGTCTGTAGATTGACCTTG +
Preference number: 3 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKWLLWI*VCRLTL
Trigger: CAAGGTCAATCTACAGACCAAGATCCAGAGCAGCCA...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACGCCAGAGACCATGGATaGGGGAGGCCCCAGGGCATT +
Preference number: 3 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDARDHG*GRPQGI
Trigger: AATGCCCTGGGGCCTCCCCAATCCATGGTCTCTGGC...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp GGAATCTTGATTCCCCATAGATTGAGAGAGGCTGACTaGGGCCATTCTATGGCAGCTCACCATGTCAGAAGA +
Preference number: 3 (lower is better)
Translates to: GILIPHRLREAD*GHSMAAHHVRR
Trigger: TCTTCTGACATGGTGAGCTGCCATAGAATGGCCCCAGTCAGCCTCTCTCAATCTATGGGGAATCAAGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAGCCAGAGACCATGGATaGGGGAGGCCCCAGGGCATT +
Preference number: 3 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKARDHG*GRPQGI
Trigger: AATGCCCTGGGGCCTCCCCAATCCATGGTCTCTGGC...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp CTGAGACACCAACCAAGCAGCATATACCAGCTGGTATaGGAACCTCCGAACACATATTCAGCAGAAGACTGC +
Preference number: 3 (lower is better)
Translates to: LRHQPSSIYQLV*EPPNTYSAEDC
Trigger: GCAGTCTTCTGCTGAATATGTGTTCGGAGGTTCTCATACCAGCTGGTATATGCTGCTTGGTTGGTGTCTCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 72 bp AGCCAGAGCCACATGTCTGAAACTGCAGAATTCTGCTaGTTGCAGGAGCTGGAACATAGAACCCTTGTTCTA +
Preference number: 3 (lower is better)
Translates to: SQSHMSETAEFC*LQELEHRTLVL
Trigger: TAGAACAAGGGTTCTATGTTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGTTTCAGACATGTGGCTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTATTGATTCCCCATAGATaGAGAGAGGCTGACTGGGGC +
Preference number: 3 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVLIPHR*READWG
Trigger: GCCCCAGTCAGCCTCTCTCAATCTATGGGGAATCAA...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGCTAGAACACAAGATTTaGCTCCATTTCACTTCCTGG +
Preference number: 3 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKLEHKI*LHFTSW
Trigger: CCAGGAAGTGAAATGGAGCAAAATCTTGTGTTCTAG...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCTGGAACATAGAACCCTaGTTCTATTACAGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCWNIEP*FYYSFL
Trigger: CAGAAAGCTGTAATAGAACAAGGGTTCTATGTTCCA...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGTCAGCAGCCTACAGATaGGGAAGGATCTTCACCAGC +
Preference number: 3 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLSAAYR*GRIFTS
Trigger: GCTGGTGAAGATCCTTCCCAATCTGTAGGCTGCTGA...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp CAGCTGGGCAAATTCCAAACTCTGCATCTCCATGGCTaGTGTCAAAGCGGTCTTCAGATCTCTACTCCTTTT +
Preference number: 3 (lower is better)
Translates to: QLGKFQTLHLHG*CQSGLQISTPF
Trigger: AAAAGGAGTAGAGATCTGAAGACCGCTTTGACATCAGCCATGGAGATGCAGAGTTTGGAATTTGCCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp GCAACTAGGGTGAGGATCTTATGCACATATCCACAGTaGCACACCTACTCCAACCAGGTCACACTTATTGCA +
Preference number: 3 (lower is better)
Translates to: ATRVRILCTYPQ*HTYSNQVTLIA
Trigger: TGCAATAAGTGTGACCTGGTTGGAGTAGGTGTGTCACTGTGGATATGTGCATAAGATCCTCACCCTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp ACACACATGACAGGTCTGAAAACCTGGAAGCAGTCCTaGGGCAAAGAGTTTCATGGAAACTTAGCTTCCTGG +
Preference number: 3 (lower is better)
Translates to: THMTGLKTWKQS*GKEFHGNLASW
Trigger: CCAGGAAGCTAAGTTTCCATGAAACTCTTTGCCTCAGGACTGCTTCCAGGTTTTCAGACCTGTCATGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp GTATCTGAATGTGGGATAACAACCCATCCCTCCACTTaGTGCCCTGTCTTCCTACTGGAGATGGACTCTAAA +
Preference number: 3 (lower is better)
Translates to: VSECGITTHPST*CPVFLLEMDSK
Trigger: TTTAGAGTCCATCTCCAGTAGGAAGACAGGGCATCAAGTGGAGGGATGGGTTGTTATCCCACATTCAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 72 bp GAAAGACAGAAAACCAGCTGGGCAAATTCCAAACTCTaGATCTCCATGGCTGATGTCAAAGCGGTCTTCAGA +
Preference number: 3 (lower is better)
Translates to: ERQKTSWANSKL*ISMADVKAVFR
Trigger: TCTGAAGACCGCTTTGACATCAGCCATGGAGATGCAGAGTTTGGAATTTGCCCAGCTGGTTTTCTGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 72 bp AGGAGGAGTGTGACACCTCAGCAATATCAACTAACCTaGACCTACAAGATCTCTCAGACACTGAGACACCAA +
Preference number: 3 (lower is better)
Translates to: RRSVTPQQYQLT*TYKISQTLRHQ
Trigger: TTGGTGTCTCAGTGTCTGAGAGATCTTGTAGGTGCAGGTTAGTTGATATTGCTGAGGTGTCACACTCCTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp ACAGAGCAGAGAAGGAGGAAAAGGCTAACCAATGACTaGCCCAATTTGATACACACCCTATGGGCAAGAAGA +
Preference number: 3 (lower is better)
Translates to: TEQRRRKRLTND*PNLIHTLWARR
Trigger: TCTTCTTGCCCATAGGGTGTGTATCAAATTGGGCCAGTCATTGGTTAGCCTTTTCCTCCTTCTCTGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp ATAGATATTGGAGGTGGATTCAGAGAGGAAACTGGCTaGGAGAGGGGATGTGGAAGAATCATGTATAGGGAG +
Preference number: 3 (lower is better)
Translates to: IDIGGGFREETG*ERGCGRIMYRE
Trigger: CTCCCTATACATGATTCTTCCACATCCCCTCTCCCAGCCAGTTTCCTCTCTGAATCCACCTCCAATATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp TTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTaGTCCTGTGAAAGCTTGATTCCCAGTTGTAGGGGA +
Preference number: 3 (lower is better)
Translates to: LALSGINERKSP*SCESLIPSCRG
Trigger: TCCCCTACAACTGGGAATCAAGCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCCACCTATCTGGAATCTaGATTCCCCATAGATTGAGA +
Preference number: 3 (lower is better)
Translates to: RLALSGINERKSPWSCESHLSGI*IPHRLR
Trigger: TCTCAATCTATGGGGAATCAAGATTCCAGATAGGTG...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGCCCTTGTGTTCGTATTaGTTTGTCATTTCTCACCAA +
Preference number: 3 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKPLCSY*FVISHQ
Trigger: TTGGTGAGAAATGACAAACAAATACGAACACAAGGG...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGCGAAATGCATCAGTGTaGACAATTAGTAATCAGGCA +
Preference number: 3 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKRNASV*TISNQA
Trigger: TGCCTGATTACTAATTGTCAACACTGATGCATTTCG...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCCTTCCCTACCTAAGATaGGCTGCTCTGGATCTTGGT +
Preference number: 3 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTLPYLR*AALDLG
Trigger: ACCAAGATCCAGAGCAGCCAATCTTAGGTAGGGAAG...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp GCGGTCTTCAGATCTCTACTCCTTTTATATCTTTGTTaGCCGCAACAAACTGCTTTCTCCTGGGCTGGTTCT +
Preference number: 3 (lower is better)
Translates to: AVFRSLLLLYLC*PQQTAFSWAGS
Trigger: AGAACCAGCCCAGGAGAAAGCAGTTTGTTGCGGTCAACAAAGATATAAAAGGAGTAGAGATCTGAAGACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp CAGCTTGGTCTTAATGTTGGTCCTCCAAGAATTATATaGAGGCTGTCCCTGAACCTGTTGCTTGCATGTGGA +
Preference number: 3 (lower is better)
Translates to: QLGLNVGPPRII*RLSLNLLLACG
Trigger: TCCACATGCAAGCAACAGGTTCAGGGACAGCCTTCATATAATTCTTGGAGGACCAACATTAAGACCAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 72 bp AGAGCCACATGTCTGAAACTGCAGAATTCTGCTGCTTaGAGGAGCTGGAACATAGAACCCTTGTTCTATTAC +
Preference number: 3 (lower is better)
Translates to: RATCLKLQNSAA*RSWNIEPLFYY
Trigger: GTAATAGAACAAGGGTTCTATGTTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGTTTCAGACATGTGGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp TCTTTGTTGACCGCAACAAACTGCTTTCTCCTGGGCTaGTTCTACTCCCTGTTAGTATATTTCCTCACCATG +
Preference number: 3 (lower is better)
Translates to: SLLTATNCFLLG*FYSLLVYFLTM
Trigger: CATGGTGAGGAAATATACTAACAGGGAGTAGAACCAGCCCAGGAGAAAGCAGTTTGTTGCGGTCAACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp GAAAACCTGGAAGCAGTCCTGAGGCAAAGAGTTTCATaGAAACTTAGCTTCCTGGAACCTTGGCATTCTCAA +
Preference number: 3 (lower is better)
Translates to: ENLEAVLRQRVS*KLSFLEPWHSQ
Trigger: TTGAGAATGCCAAGGTTCCAGGAAGCTAAGTTTCCATGAAACTCTTTGCCTCAGGACTGCTTCCAGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp GGAAACAGATGCAGAAACCCACAGTCAGACATTTCATaGAACTCAAGGAGTCTTATGGGAGAGTTGGATGGA +
Preference number: 3 (lower is better)
Translates to: GNRCRNPQSDIS*NSRSLMGELDG
Trigger: TCCATCCAACTCTCCCATAAGACTCCTTGAGTTCCATGAAATGTCTGACTGTGGGTTTCTGCATCTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAATTGATTCCCCATAGATaGAGAGAGGCTGACTGGGGC +
Preference number: 3 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKLIPHR*READWG
Trigger: GCCCCAGTCAGCCTCTCTCAATCTATGGGGAATCAA...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCAGGCATTCCTCTGTTTaGTGTCAGATACTACAATGT +
Preference number: 3 (lower is better)
Translates to: RLALSGINERKSPWSCESRHSSV*CQILQC
Trigger: ACATTGTAGTATCTGACACAAAACAGAGGAATGCCT...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTAGAGCTGACTCTGGGCTaGGATTTTGTAGTGATGTCA +
Preference number: 3 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVELTLG*DFVVMS
Trigger: TGACATCACTACAAAATCCAAGCCCAGAGTCAGCTC...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCGAGCTGACTCTGGGCTaGGATTTTGTAGTGATGTCA +
Preference number: 3 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTELTLG*DFVVMS
Trigger: TGACATCACTACAAAATCCAAGCCCAGAGTCAGCTC...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAATGGCTGCTCTGGATCTaGGTCTGTAGATTGACCTTG +
Preference number: 3 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQWLLWI*VCRLTL
Trigger: CAAGGTCAATCTACAGACCAAGATCCAGAGCAGCCA...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTCTTCCCTACCTAAGATaGGCTGCTCTGGATCTTGGT +
Preference number: 3 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTLPYLR*AALDLG
Trigger: ACCAAGATCCAGAGCAGCCAATCTTAGGTAGGGAAG...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCAAATTAGAGAATTATTaGGCTGCAGAGATGGCTCAG +
Preference number: 3 (lower is better)
Translates to: RLALSGINERKSPWSCESKLENY*AAEMAQ
Trigger: CTGAGCCATCTCTGCAGCCAAATAATTCTCTAATTT...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp ATGTTGGTCCTCCAAGAATTATATGAAGGCTGTCCCTaGACCTGTTGCTTGCATGTGGATTCTCTTCCTCTA +
Preference number: 3 (lower is better)
Translates to: MLVLQELYEGCP*TCCLHVDSLPL
Trigger: TAGAGGAAGAGAATCCACATGCAAGCAACAGGTTCAGGGACAGCCTTCATATAATTCTTGGAGGACCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp TCATGGCAATGGGATGAGGAACAGTCATGGGGGAACTaGGAGGGAGATAATGACAGGACTGTAATTAAAGAT +
Preference number: 3 (lower is better)
Translates to: SWQWDEEQSWGN*EGDNDRTVIKD
Trigger: ATCTTTAATTACAGTCCTGTCATTATCTCCCTCTCAGTTCCCCCATGACTGTTCCTCATCCCATTGCCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 72 bp AGGTCATACCTATTGCAACAAGGCCACACCTCCAAATaGTGCCACACTCTGATCCAAGAATATACAAACCAT +
Preference number: 3 (lower is better)
Translates to: RSYLLQQGHTSK*CHTLIQEYTNH
Trigger: ATGGTTTGTATATTCTTGGATCAGAGTGTGGCAGCATTTGGAGGTGTGGCCTTGTTGCAATAGGTATGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 72 bp ACCTTGGCATTCTCAATAGCATGTATACTCAAATTCTaGCCTTGCATTAGTCGGGTGTATGGATCTGTGTGC +
Preference number: 3 (lower is better)
Translates to: TLAFSIACILKF*PCISRVYGSVC
Trigger: GCACACAGATCCATACACCCGACTAATGCAAGGGCAGAATTTGAGTATACATGCTATTGAGAATGCCAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp TGTCTGAAACTGCAGAATTCTGCTGCTTGCAGGAGCTaGAACATAGAACCCTTGTTCTATTACAGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: CLKLQNSAACRS*NIEPLFYYSFL
Trigger: CAGAAAGCTGTAATAGAACAAGGGTTCTATGTTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGTTTCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp AAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTaGGGGACTAAGGAAACCAACATACCCACAAAATAT +
Preference number: 3 (lower is better)
Translates to: KWLLLVARKNSK*GTKETNIPTKY
Trigger: ATATTTTGTGGGTATGTTGGTTTCCTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp GGGGAGCACCCTTATAGAAGCAAGAATGAAGGAATGTaGGATAGGAGGTTTCTAATCAAGAAGGGGAATAAC +
Preference number: 3 (lower is better)
Translates to: GEHPYRSKNEGM*DRRFLIKKGNN
Trigger: GTTATTCCCCTTCTTGATTAGAAACCTCCTATCCCACATTCCTTCATTCTTGCTTCTATAAGGGTGCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGTTGATTCCCCATAGATaGAGAGAGGCTGACTGGGGC +
Preference number: 3 (lower is better)
Translates to: FIELSAFIWKLENYLAAELIPHR*READWG
Trigger: GCCCCAGTCAGCCTCTCTCAATCTATGGGGAATCAA...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTGACTTCCAGGCACCTATCTGGAATCTaGATTCCCCATAGATTGAGA +
Preference number: 3 (lower is better)
Translates to: LRVLCLHPKADSGRLTSRHLSGI*IPHRLR
Trigger: TCTCAATCTATGGGGAATCAAGATTCCAGATAGGTG...CCTGGAAGTCAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGAGATGCAGCACTCCCTaGTGTTCGTATTTGTTTGTC +
Preference number: 3 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLRCSTP*CSYLFV
Trigger: GACAAACAAATACGAACACAAGGGAGTGCTGCATCT...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAATCAGGCATCTCAGTTaGCCAGATAGAAATCTCAGG +
Preference number: 3 (lower is better)
Translates to: LPQALLHICPRNSFRQQQIRHLS*PDRNLR
Trigger: CCTGAGATTTCTATCTGGCAAACTGAGATGCCTGAT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCCCACATTCTTCTCCTTaGAAATCTCTTGGGCCAAGT +
Preference number: 3 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTPHSSP*KSLGPS
Trigger: ACTTGGCCCAAGAGATTTCAAAGGAGAAGAATGTGG...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACAATGACTGGCCCAATTaGATACACACCCTATGGGCA +
Preference number: 3 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDNDWPN*IHTLWA
Trigger: TGCCCATAGGGTGTGTATCAAATTGGGCCAGTCATT...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGCATTCAGAAGAAACCTaGAGGCTCTTCCAATTGACC +
Preference number: 3 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLHSEET*RLFQLT
Trigger: GGTCAATTGGAAGAGCCTCAAGGTTTCTTCTGAATG...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp AGGACCTGGGTTCAATTCCAGCCCTCATGTGACAACTaGAAACTGTCTATAACTTCAGGTACAGGATATACA +
Preference number: 3 (lower is better)
Translates to: RTWVQFQPSCDN*KLSITSGTGYT
Trigger: TGTATATCCTGTACCTGAAGTTATAGACAGTTTTCAGTTGTCACATGAGGGCTGGAATTGAACCCAGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp ATTTGTCCCCGTAATTCTTTTAGACAGCAACAAGTCTaGGCCAGAGTATCTGAATGTGGGATAACAACCCAT +
Preference number: 3 (lower is better)
Translates to: ICPRNSFRQQQV*ARVSECGITTH
Trigger: ATGGGTTGTTATCCCACATTCAGATACTCTGGCCCAGACTTGTTGCTGTCTAAAAGAATTACGGGGACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTGACTTCCAGGTGTGTTCGTATTTGTTaGTCATTTCTCACCAACTCC +
Preference number: 3 (lower is better)
Translates to: LRVLCLHPKADSGRLTSRCVRIC*SFLTNS
Trigger: GGAGTTGGTGAGAAATGACAAACAAATACGAACACA...CCTGGAAGTCAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACAGATGCAGCACTCCCTaGTGTTCGTATTTGTTTGTC +
Preference number: 3 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDRCSTP*CSYLFV
Trigger: GACAAACAAATACGAACACAAGGGAGTGCTGCATCT...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAATCAGGCATCTCAGTTaGCCAGATAGAAATCTCAGG +
Preference number: 3 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQIRHLS*PDRNLR
Trigger: CCTGAGATTTCTATCTGGCAAACTGAGATGCCTGAT...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTACTAGAACACAAGATTTaGCTCCATTTCACTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVLEHKI*LHFTSW
Trigger: CCAGGAAGTGAAATGGAGCAAAATCTTGTGTTCTAG...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCATCTTGGTCTGTAGATaGACCTTGAATGCAGAGATC +
Preference number: 3 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTILVCR*TLNAEI
Trigger: GATCTCTGCATTCAAGGTCAATCTACAGACCAAGAT...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACGGCAAGAAGAAGTCCTaGGCCCTAATAATTGTACTC +
Preference number: 3 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDGKKKS*ALIIVL
Trigger: GAGTACAATTATTAGGGCCAAGGACTTCTTCTTGCC...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAGGCAAGAAGAAGTCCTaGGCCCTAATAATTGTACTC +
Preference number: 3 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQGKKKS*ALIIVL
Trigger: GAGTACAATTATTAGGGCCAAGGACTTCTTCTTGCC...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAAATGACTGGCCCAATTaGATACACACCCTATGGGCA +
Preference number: 3 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKNDWPN*IHTLWA
Trigger: TGCCCATAGGGTGTGTATCAAATTGGGCCAGTCATT...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGAGGCATTCCTCTGTTTaGTGTCAGATACTACAATGT +
Preference number: 3 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLRHSSV*CQILQC
Trigger: ACATTGTAGTATCTGACACAAAACAGAGGAATGCCT...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAAAGGCATTCCTCTGTTTaGTGTCAGATACTACAATGT +
Preference number: 3 (lower is better)
Translates to: LPQALLHICPRNSFRQQQRHSSV*CQILQC
Trigger: ACATTGTAGTATCTGACACAAAACAGAGGAATGCCT...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTACGAAATGCATCAGTGTaGACAATTAGTAATCAGGCA +
Preference number: 3 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVRNASV*TISNQA
Trigger: TGCCTGATTACTAATTGTCAACACTGATGCATTTCG...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGCGAAATGCATCAGTGTaGACAATTAGTAATCAGGCA +
Preference number: 3 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLRNASV*TISNQA
Trigger: TGCCTGATTACTAATTGTCAACACTGATGCATTTCG...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAACCACATTCTTCTCCTTaGAAATCTCTTGGGCCAAGT +
Preference number: 3 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKPHSSP*KSLGPS
Trigger: ACTTGGCCCAAGAGATTTCAAAGGAGAAGAATGTGG...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACACAGACACAGGCTGGTaGTTCAATGGAATTGAATCA +
Preference number: 3 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDTDTGW*FNGIES
Trigger: TGATTCAATTCCATTGAACAACCAGCCTGTGTCTGT...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTTGTGTTCGTATTTGTTaGTCATTTCTCACCAACTCC +
Preference number: 3 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTCVRIC*SFLTNS
Trigger: GGAGTTGGTGAGAAATGACAAACAAATACGAACACA...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTCCCTTGTGTTCGTATTaGTTTGTCATTTCTCACCAA +
Preference number: 3 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTPLCSY*FVISHQ
Trigger: TTGGTGAGAAATGACAAACAAATACGAACACAAGGG...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCCCTTGTGTTCGTATTaGTTTGTCATTTCTCACCAA +
Preference number: 3 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDPLCSY*FVISHQ
Trigger: TTGGTGAGAAATGACAAACAAATACGAACACAAGGG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGAGATGCAGCACTCCCTaGTGTTCGTATTTGTTTGTC +
Preference number: 3 (lower is better)
Translates to: FIELSAFIWKLENYLAAERCSTP*CSYLFV
Trigger: GACAAACAAATACGAACACAAGGGAGTGCTGCATCT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGATCAGGCATCTCAGTTaGCCAGATAGAAATCTCAGG +
Preference number: 3 (lower is better)
Translates to: FIELSAFIWKLENYLAAEIRHLS*PDRNLR
Trigger: CCTGAGATTTCTATCTGGCAAACTGAGATGCCTGAT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp ATACAGACACAGGCTGGTTGTTCAATGGAATTGAATCAAAGACCCAGGAATAAAATCTTGGTCTGTAGATaGACCTTGAATGCAGAGATC +
Preference number: 3 (lower is better)
Translates to: IQTQAGCSMELNQRPRNKILVCR*TLNAEI
Trigger: GATCTCTGCATTCAAGGTCAATCTACAGACCAAGAT...TTTATTCCTGGGTCTTTGATTCAATTCCATTGAACAACCAGCCTGTGTCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAATGGAACATAGAACCCTaGTTCTATTACAGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQWNIEP*FYYSFL
Trigger: CAGAAAGCTGTAATAGAACAAGGGTTCTATGTTCCA...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGGGCAAGAAGAAGTCCTaGGCCCTAATAATTGTACTC +
Preference number: 3 (lower is better)
Translates to: FIELSAFIWKLENYLAAEGKKKS*ALIIVL
Trigger: GAGTACAATTATTAGGGCCAAGGACTTCTTCTTGCC...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCCAGACCTATGGAAGATaGTGTTTTGACAAAGAACTA +
Preference number: 3 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTQTYGR*CFDKEL
Trigger: TAGTTCTTTGTCAAAACACAATCTTCCATAGGTCTG...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp AGTGATGTCATTCATCCAGACGAAATGCATCAGTGTTaGCAATTAGTAATCAGGCATCTCAGTTTGCCAGAT +
Preference number: 3 (lower is better)
Translates to: SDVIHPDEMHQC*QLVIRHLSLPD
Trigger: ATCTGGCAAACTGAGATGCCTGATTACTAATTGTCAACACTGATGCATTTCGTCTGGATGAATGACATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp CATAGTAAGGTAGGCTTTGTCCCAGAGATGAAGGGATaGTTCAACATATGGAAATATCCCAATGTAATCTAC +
Preference number: 3 (lower is better)
Translates to: HSKVGFVPEMKG*FNIWKYPNVIY
Trigger: GTAGATTACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCCTACCTTACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGCTAGAACACAAGATTTaGCTCCATTTCACTTCCTGG +
Preference number: 3 (lower is better)
Translates to: FIELSAFIWKLENYLAAELEHKI*LHFTSW
Trigger: CCAGGAAGTGAAATGGAGCAAAATCTTGTGTTCTAG...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGATCTTGGTCTGTAGATaGACCTTGAATGCAGAGATC +
Preference number: 3 (lower is better)
Translates to: FIELSAFIWKLENYLAAEILVCR*TLNAEI
Trigger: GATCTCTGCATTCAAGGTCAATCTACAGACCAAGAT...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp ATGGCCAAAACAATCCTGAACTACAAAAGGACTTCATaGATAATCACCATCCCTGACCTCAAACTATACTAC +
Preference number: 3 (lower is better)
Translates to: MAKTILNYKRTS*IITIPDLKLYY
Trigger: GTAGTATAGTTTGAGGTCAGGGATGGTGATTATTCATGAAGTCCTTTTGTAGTTCAGGATTGTTTTGGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 72 bp CTCTGTTTTGTGTCAGATACTACAATGTACCCTGCCTaGTGTGACACACTCCATTGTTTTCTGTATTATATA +
Preference number: 3 (lower is better)
Translates to: LCFVSDTTMYPA*CDTLHCFLYYI
Trigger: TATATAATACAGAAAACAATGGAGTGTGTCACAGCAGGCAGGGTACATTGTAGTATCTGACACAAAACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp AAAAGTATCAGAGGATGGAAAGATTCCCTATGCTCATaGATTGGCAGAATATACAGTGAAAATGGCCATCTT +
Preference number: 3 (lower is better)
Translates to: KSIRGWKDSLCS*IGRIYSENGHL
Trigger: AAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATCTTTCCATCCTCTGATACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp GTAAGGGTAAAGTTCATAGAGCTAAGTGCCTTCATATaGAAATTAGAGAATTATTTGGCTGCAGAGATGGCT +
Preference number: 3 (lower is better)
Translates to: VRVKFIELSAFI*KLENYLAAEMA
Trigger: AGCCATCTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAACTTTACCCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp AATGGAAAGGAAAGGTTAATAGGGCAAAGGAGGATGTaGAAATGGTTCTTTGTAGTGAATCCAATCTGCATT +
Preference number: 3 (lower is better)
Translates to: NGKERLIGQRRM*KWFFVVNPICI
Trigger: AATGCAGATTGGATTCACTACAAAGAACCATTTCCACATCCTCCTTTGCCCTATTAACCTTTCCTTTCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR-3UTR CAA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGTGTGTTCGTATTTGTTaGTCATTTCTCACCAACTCC +
Preference number: 3 (lower is better)
Translates to: FIELSAFIWKLENYLAAECVRIC*SFLTNS
Trigger: GGAGTTGGTGAGAAATGACAAACAAATACGAACACA...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp TTTACTGTAAATATTACCTGGTTCCTGTCAGTCCTTTaGAGGCATTCCTCTGTTTTGTGTCAGATACTACAA +
Preference number: 3 (lower is better)
Translates to: FTVNITWFLSVL*RHSSVLCQILQ
Trigger: TTGTAGTATCTGACACAAAACAGAGGAATGCCTTCAAAGGACTGACAGGAACCAGGTAATATTTACAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATaGAAATATCCCAATGTAATCTACCATATAAACAAA +
Preference number: 3 (lower is better)
Translates to: GFVPEMKGWFNI*KYPNVIYHINK
Trigger: TTTGTTTATATGGTAGATTACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp AATTGTCATATTCATTTCTTGAGGCTGCAGTCACCCTaGTACCTAAACCACACAAACATTCAACAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: NCHIHFLRLQSP*YLNHTNIQQRK
Trigger: TTTTCTTTGTTGAATGTTTGTGTGGTTTAGGTATCAGGGTGACTGCAGCCTCAAGAAATGAATATGACAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp ACAGAATTAACAGGAAGCCTACAAACTCATATAACCTaGACAATTCTCTACTTAATGACTACTGTGTCAAGG +
Preference number: 3 (lower is better)
Translates to: TELTGSLQTHIT*TILYLMTTVSR
Trigger: CCTTGACACAGTAGTCATTAAGTAGAGAATTGTTCAGGTTATATGAGTTTGTAGGCTTCCTGTTAATTCTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR GCA 72 bp GAAAGTATTGGTAAGGGTAAAGTTCATAGAGCTAAGTaGCTTCATATGGAAATTAGAGAATTATTTGGCTGC +
Preference number: 3 (lower is better)
Translates to: ESIGKGKVHRAK*LHMEIRELFGC
Trigger: GCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAACTTTACCCTTACCAATACTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp TACATTGCATGTTACAAGAAAGTTGGTGAATTCTTCTaGCAAATGGAGATTCCCCTACAGAAACTTAAAAGA +
Preference number: 3 (lower is better)
Translates to: YIACYKKVGEFF*QMEIPLQKLKR
Trigger: TCTTTTAAGTTTCTGTAGGGGAATCTCCATTTGTCAGAAGAATTCACCAACTTTCTTGTAACATGCAATGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp GTACCAACTTTTATATTAGTTAGGGTTTTACTGCTGTaGACAGACACCAAGATCAAGGCAAGTCTTATAAAA +
Preference number: 3 (lower is better)
Translates to: VPTFILVRVLLL*TDTKIKASLIK
Trigger: TTTTATAAGACTTGCCTTGATCTTGGTGTCTGTTCACAGCAGTAAAACCCTAACTAATATAAAAGTTGGTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp TGTAGAAGAATGAAAACAGATCCATATTTATCACCCTaGACAAAACTCAAGTCCCATTGGATAACAGAATTC +
Preference number: 3 (lower is better)
Translates to: CRRMKTDPYLSP*TKLKSHWITEF
Trigger: GAATTCTGTTATCCAATGGGACTTGAGTTTTGTTCAGGGTGATAAATATGGATCTGTTTTCATTCTTCTACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp GAACTACAAAAGGACTTCATGAATAATCACCATCCCTaGCCTCAAACTATACTACAGACCAATAATGATAAA +
Preference number: 3 (lower is better)
Translates to: ELQKDFMNNHHP*PQTILQTNNDK
Trigger: TTTATCATTATTGGTCTGTAGTATAGTTTGAGGTCAGGGATGGTGATTATTCATGAAGTCCTTTTGTAGTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR TCA 72 bp TTGGCACATAATTATATCAGACATTCAAGGAAAAGGTaGTACCAATATTCCTCAAACCATTCCACAAAACAG +
Preference number: 3 (lower is better)
Translates to: LAHNYIRHSRKR*YQYSSNHSTKQ
Trigger: CTGTTTTGTGGAATGGTTTGAGGAATATTGGTATCACCTTTTCCTTGAATGTCTGATATAATTATGTGCCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CCA 72 bp TGGCAAGGCAAACCAATAGCAGAAAGCATCATCTACTaGCTATTGAGTTATATTTATACCAATTCAAAACAT +
Preference number: 3 (lower is better)
Translates to: WQGKPIAESIIY*LLSYIYTNSKH
Trigger: ATGTTTTGAATTGGTATAAATATAACTCAATAGCCAGTAGATGATGCTTTCTGCTATTGGTTTGCCTTGCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp CATGCCCACCTATCTGGAATCTTGATTCCCCATAGATaGAGAGAGGCTGACTGGGGCCATTCTATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HAHLSGILIPHR*READWGHSMAA
Trigger: AGCTGCCATAGAATGGCCCCAGTCAGCCTCTCTCAATCTATGGGGAATCAAGATTCCAGATAGGTGGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp CACAGTGACACACCTACTCCAACCAGGTCATACCTATaGCAACAAGGCCACACCTCCAAATGCTGCCACACT +
Preference number: 4 (lower is better)
Translates to: HSDTPTPTRSYL*QQGHTSKCCHT
Trigger: AGTGTGGCAGCATTTGGAGGTGTGGCCTTGTTGCAATAGGTATGACCTGGTTGGAGTAGGTGTGTCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp CATGGCAGCATCCAGGCAGGCATGGTGCAGGAGGAGTaGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGT +
Preference number: 4 (lower is better)
Translates to: HGSIQAGMVQEE*RVLCLHPKADS
Trigger: ACTATCAGCCTTTGGATGAAGACATAGAACTCTCAACTCCTCCTGCACCATGCCTGCCTGGATGCTGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp ATTTCTCACCAACTCCATGCCCACCTATCTGGAATCTaGATTCCCCATAGATTGAGAGAGGCTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: ISHQLHAHLSGI*IPHRLREADWG
Trigger: GCCCCAGTCAGCCTCTCTCAATCTATGGGGAATCAAGATTCCAGATAGGTGGGCATGGAGTTGGTGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp CCTCCCCTTGAGCTAGATCCCAATTTAGGCCTGTCATaGGAACTCCTTTGCCTCAGGCTCTTCTCCATATTT +
Preference number: 4 (lower is better)
Translates to: PPLELDPNLGLS*ELLCLRLFSIF
Trigger: AAATATGGAGAAGAGCCTGAGGCAAAGGAGTTCCAATGACAGGCCTAAATTGGGATCTAGCTCAAGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp ATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCTaGATTCCCAGTTGTAGGGGAATGAGGCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: INERKSPWSCES*IPSCRGMRQEW
Trigger: CCACTCCTGCCTCATTCCCCTACAACTGGGAATCAAGCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAGAAAGGCTGTTGCTGTaGAGGTGCTGGGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQERLLL*RCWACF
Trigger: GAAGCAGGCCCAGCACCTTCACAGCAACAGCCTTTC...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp CAGTCAGATGCAGCACTCCCTTGTGTTCGTATTTGTTaGTCATTTCTCACCAACTCCATGCCCACCTATCTG +
Preference number: 4 (lower is better)
Translates to: QSDAALPCVRIC*SFLTNSMPTYL
Trigger: CAGATAGGTGGGCATGGAGTTGGTGAGAAATGACAAACAAATACGAACACAAGGGAGTGCTGCATCTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp AGAAGGAGGAAAAGGCTAACCAATGACTGGCCCAATTaGATACACACCCTATGGGCAAGAAGAAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RRRKRLTNDWPN*IHTLWARRSPW
Trigger: CCAAGGACTTCTTCTTGCCCATAGGGTGTGTATCAAATTGGGCCAGTCATTGGTTAGCCTTTTCCTCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp AGACACCATCAAATGGACAAATCAGCAGCCTACAGATaGGGAAGGATCTTCACCAGCCCTATATCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RHHQMDKSAAYR*GRIFTSPISAR
Trigger: TCTGGCAGATATAGGGCTGGTGAAGATCCTTCCCAATCTGTAGGCTGCTGATTTGTCCATTTGATGGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp GCTAGATCCCAATTTAGGCCTGTCATTGGAACTCCTTaGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAAT +
Preference number: 4 (lower is better)
Translates to: ARSQFRPVIGTP*PQALLHICPRN
Trigger: ATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAAAGGAGTTCCAATGACAGGCCTAAATTGGGATCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp TTCATAGAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTTGGCTGCAGAGGAAAGGCTGTTGCTGTaGAGGTGCTGGGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FIELSAFIWKLENYLAAEERLLL*RCWACF
Trigger: GAAGCAGGCCCAGCACCTTCACAGCAACAGCCTTTC...CTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTCTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCATATTGAGTCATCCTTaGACTTCATCCTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCILSHP*TSSLSR
Trigger: TCTACTCAAGGATGAAGTTCAAGGATGACTCAATAT...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp AATTCTGCTGCTTGCAGGAGCTGGAACATAGAACCCTaGTTCTATTACAGCTTTCTGTTCTCCAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: NSAACRSWNIEP*FYYSFLFSNPF
Trigger: GAAGGGGTTGGAGAACAGAAAGCTGTAATAGAACAAGGGTTCTATGTTCCAGCTCCTGCAAGCAGCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp CAGAGCCACATGTCTGAAACTGCAGAATTCTGCTGCTaGCAGGAGCTGGAACATAGAACCCTTGTTCTATTA +
Preference number: 4 (lower is better)
Translates to: QSHMSETAEFCC*QELEHRTLVLL
Trigger: TAATAGAACAAGGGTTCTATGTTCCAGCTCCTGCAAGCAGCAGAATTCTGCAGTTTCAGACATGTGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp CAAAGCGGTCTTCAGATCTCTACTCCTTTTATATCTTaGTTGACCGCAACAAACTGCTTTCTCCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSGLQISTPFIS*LTATNCFLLGW
Trigger: CCAGCCCAGGAGAAAGCAGTTTGTTGCGGTCAACAAAGATATAAAAGGAGTAGAGATCTGAAGACCGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCCTTCAGAGAACAATATaGCTTTCATGTTTGTGTCGG +
Preference number: 4 (lower is better)
Translates to: RLALSGINERKSPWSCESLQRTI*LSCLCR
Trigger: CCGACACAAACATGAAAGTCATATTGTTCTCTGAAG...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp AGGTTGGCCTTATCTGGCATCAATGAGAGAAAAAGCCCTTGGTCCTGTGAAAGCCTTGAACTTCATCCTTaGGTAGAAGATAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: RLALSGINERKSPWSCESLELHP*VEDNRV
Trigger: GACTCTGTTATCTTCTACTCAAGGATGAAGTTCAAG...GCTTTCACAGGACCAAGGGCTTTTTCTCTCATTGATGCCAGATAAGGCCAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR GCA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGTCATGTTTGTGTCGGTaGAGAATATGTTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKSCLCR*RICWLY
Trigger: ATAAAGCCAACATATTCTGCACCGACACAAACATGA...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CCA 90 bp TTGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTGACTTCCAGGACAAGCAGCATTAGGTaGGTTAGGGAGAAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LRVLCLHPKADSGRLTSRTSSIR*VREKKA
Trigger: TGCTTTCTTCTCCCTAACCCACCTAATGCTGCTTGT...CCTGGAAGTCAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp AATACAGTCAGATGCAGCACTCCCTTGTGTTCGTATTaGTTTGTCATTTCTCACCAACTCCATGCCCACCTA +
Preference number: 4 (lower is better)
Translates to: NTVRCSTPLCSY*FVISHQLHAHL
Trigger: TAGGTGGGCATGGAGTTGGTGAGAAATGACAAACAAATACGAACACAAGGGAGTGCTGCATCTGACTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTAACAAGCAGCATTAGGTaGGTTAGGGAGAAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVTSSIR*VREKKA
Trigger: TGCTTTCTTCTCCCTAACCCACCTAATGCTGCTTGT...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CCA 90 bp ATCCAGAAGTGGCTACTTCTTGTAGCCAGGAAGAACTCCAAGTGGGGGACTAAGTGGGACACAATAATTTaGACACAGACAAATATTGAG +
Preference number: 4 (lower is better)
Translates to: IQKWLLLVARKNSKWGTKWDTII*TQTNIE
Trigger: CTCAATATTTGTCTGTGTCCAAATTATTGTGTCCCA...CTTAGTCCCCCACTTGGAGTTCTTCCTGGCTACAAGAAGTAGCCACTTCTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp TCGCTTTGTGAAAATACAGTCAGATGCAGCACTCCCTaGTGTTCGTATTTGTTTGTCATTTCTCACCAACTC +
Preference number: 4 (lower is better)
Translates to: SLCENTVRCSTP*CSYLFVISHQL
Trigger: GAGTTGGTGAGAAATGACAAACAAATACGAACACAAGGGAGTGCTGCATCTGACTGTATTTTCACAAAGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp GTATCAGAGGATGGAAAGATTCCCTATGCTCATGGATaGGCAGAATATACAGTGAAAATGGCCATCTTACCA +
Preference number: 4 (lower is better)
Translates to: VSEDGKIPYAHG*AEYTVKMAILP
Trigger: TGGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATCTTTCCATCCTCTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp GAGCTAAGTGCCTTCATATGGAAATTAGAGAATTATTaGGCTGCAGAGATGGCTCAGCAGGTAAGAGCATTA +
Preference number: 4 (lower is better)
Translates to: ELSAFIWKLENY*AAEMAQQVRAL
Trigger: TAATGCTCTTACCTGCTGAGCCATCTCTGCAGCCAAATAATTCTCTAATTTCCATATGAAGGCACTTAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGCTTCAGAGAACAATATaGCTTTCATGTTTGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLLQRTI*LSCLCR
Trigger: CCGACACAAACATGAAAGTCATATTGTTCTCTGAAG...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAACTTCAGAGAACAATATaGCTTTCATGTTTGTGTCGG +
Preference number: 4 (lower is better)
Translates to: LPQALLHICPRNSFRQQQLQRTI*LSCLCR
Trigger: CCGACACAAACATGAAAGTCATATTGTTCTCTGAAG...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAACTTGAACTTCATCCTTaGGTAGAAGATAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: LPQALLHICPRNSFRQQQLELHP*VEDNRV
Trigger: GACTCTGTTATCTTCTACTCAAGGATGAAGTTCAAG...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTCTTGAACTTCATCCTTaGGTAGAAGATAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTLELHP*VEDNRV
Trigger: GACTCTGTTATCTTCTACTCAAGGATGAAGTTCAAG...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp GATTCCCTATGCTCATGGATTGGCAGAATATACAGTGAAAATGGCCATCTTACCATATTGAGTCATCCTTaGACTTCATCCTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: DSLCSWIGRIYSENGHLTILSHP*TSSLSR
Trigger: TCTACTCAAGGATGAAGTTCAAGGATGACTCAATAT...GGTAAGATGGCCATTTTCACTGTATATTCTGCCAATCCATGAGCATAGGGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR TCA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGATATTGAGTCATCCTTaGACTTCATCCTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLILSHP*TSSLSR
Trigger: TCTACTCAAGGATGAAGTTCAAGGATGACTCAATAT...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CCA 90 bp GGCTTTGTCCCAGAGATGAAGGGATGGTTCAACATATGGAAATATCCCAATGTATTATGGAGTAACTCATaGGTAAAATTGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: GFVPEMKGWFNIWKYPNVLWSNS*VKLSRT
Trigger: AGTCCTGCTCAATTTTACCCATGAGTTACTCCATAA...TACATTGGGATATTTCCATATGTTGAACCATCCCTTCATCTCTGGGACAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CCA 90 bp TTGAGAGTTCTATGTCTTCATCCAAAGGCTGATAGTGGAAGACTGACTTCCAGGTGGGACACAATAATTTaGACACAGACAAATATTGAG +
Preference number: 4 (lower is better)
Translates to: LRVLCLHPKADSGRLTSRWDTII*TQTNIE
Trigger: CTCAATATTTGTCTGTGTCCAAATTATTGTGTCCCA...CCTGGAAGTCAGTCTTCCACTATCAGCCTTTGGATGAAGACATAGAACTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp CAATTTGATACACACCCTATGGGCAAGAAGAAGTCCTaGGCCCTAATAATTGTACTCTGTTATGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QFDTHPMGKKKS*ALIIVLCYACR
Trigger: TCTACAAGCATAACAGAGTACAATTATTAGGGCCAAGGACTTCTTCTTGCCCATAGGGTGTGTATCAAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp TTCTCCCATGTCTCATCAGACCACTATGGATTAAAATaGAACTTCAACTGTAGGCACTGCATTTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: FSHVSSDHYGLK*NFNCRHCISKS
Trigger: GCTTTTGGAAATGCAGTGCCTACAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR GCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAATCATGTTTGTGTCGGTaGAGAATATGTTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQSCLCR*RICWLY
Trigger: ATAAAGCCAACATATTCTGCACCGACACAAACATGA...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR GCA 90 bp TTGCCTCAGGCTCTTCTCCATATTTGTCCCCGTAATTCTTTTAGACAGCAACAACCCCTCAAAACAATGTaGAAATACATAAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: LPQALLHICPRNSFRQQQPLKTM*KYIRNV
Trigger: CACATTTCTTATGTATTTGCACATTGTTTTGAGGGG...TTGTTGCTGTCTAAAAGAATTACGGGGACAAATATGGAGAAGAGCCTGAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACTTATGGAGTAACTCATaGGTAAAATTGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDLWSNS*VKLSRT
Trigger: AGTCCTGCTCAATTTTACCCATGAGTTACTCCATAA...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTTTATGGAGTAACTCATaGGTAAAATTGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTLWSNS*VKLSRT
Trigger: AGTCCTGCTCAATTTTACCCATGAGTTACTCCATAA...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp CTTTACTGTAAATATTACCTGGTTCCTGTCAGTCCTTaGAAGGCATTCCTCTGTTTTGTGTCAGATACTACA +
Preference number: 4 (lower is better)
Translates to: LYCKYYLVPVSP*KAFLCFVSDTT
Trigger: TGTAGTATCTGACACAAAACAGAGGAATGCCTTCAAAGGACTGACAGGAACCAGGTAATATTTACAGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp ACTCCCTTAATCTGTTATCTCCTAGAACACAAGATTTaGCTCCATTTCACTTCCTGGTACCCCTTTAATACT +
Preference number: 4 (lower is better)
Translates to: TPLICYLLEHKI*LHFTSWYPFNT
Trigger: AGTATTAAAGGGGTACCAGGAAGTGAAATGGAGCAAAATCTTGTGTTCTAGGAGATAACAGATTAAGGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR GCA 90 bp TCAATTTGGTGGTTTCTCAGAAAACTGGTACTAGTTCTACCTCAAGAGCCAACTCCCCTCAAAACAATGTaGAAATACATAAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: SIWWFLRKLVLVLPQEPTPLKTM*KYIRNV
Trigger: CACATTTCTTATGTATTTGCACATTGTTTTGAGGGG...AGTTGGCTCTTGAGGTAGAACTAGTACCAGTTTTCTGAGAAACCACCAAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR GCA 90 bp GTCTGCTTCAGCTACATCCTGTATAAGGGAGTTTACAGAAAAACATCACATGACCCCCTCAAAACAATGTaGAAATACATAAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: VCFSYILYKGVYRKTSHDPLKTM*KYIRNV
Trigger: CACATTTCTTATGTATTTGCACATTGTTTTGAGGGG...GTCATGTGATGTTTTTCTGTAAACTCCCTTATACAGGATGTAGCTGAAGCAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CCA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAATGGGACACAATAATTTaGACACAGACAAATATTGAG +
Preference number: 4 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQWDTII*TQTNIE
Trigger: CTCAATATTTGTCTGTGTCCAAATTATTGTGTCCCA...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp TTTCCCAACCAAATAAAGGACAGGGATCAGATGGTTTaGGCACATAATTATATCAGACATTCAAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: FPNQIKDRDQMV*AHNYIRHSRKR
Trigger: CCTTTTCCTTGAATGTCTGATATAATTATGTGCCAAAACCATCTGATCCCTGTCCTTTATTTGGTTGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp ACAATACACACAAACTTAAGGGACACATTGAAAGTATaGGTAAGGGTAAAGTTCATAGAGCTAAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: TIHTNLRDTLKV*VRVKFIELSAF
Trigger: GAAGGCACTTAGCTCTATGAACTTTACCCTTACCAATACTTTCAATGTGTCCCTTAAGTTTGTGTGTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
3UTR CAA 72 bp AATGAATGCACAATACACACAAACTTAAGGGACACATaGAAAGTATTGGTAAGGGTAAAGTTCATAGAGCTA +
Preference number: 4 (lower is better)
Translates to: NECTIHTNLRDT*KVLVRVKFIEL
Trigger: TAGCTCTATGAACTTTACCCTTACCAATACTTTCAATGTGTCCCTTAAGTTTGTGTGTATTGTGCATTCATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CAA 90 bp AGTCCACCAAGCAAGCATAGGATGGGTCTTCCAGCAGGCAATGGAAACAGATGCAACTCATGGGTAAAATaGAGCAGGACTGAGAAACAT +
Preference number: 5 (lower is better)
Translates to: SPPSKHRMGLPAGNGNRCNSWVK*SRTEKH
Trigger: ATGTTTCTCAGTCCTGCTCAATTTTACCCATGAGTT...GCATCTGTTTCCATTGCCTGCTGGAAGACCCATCCTATGCTTGCTTGGTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS CCA 90 bp AGATCAATGGGCTTAGGCCTGCTTTCACCAAGGAACATGCAGAGGTaGGAAATAAAAAGGATACTGTTAGCTGAGATCCCAACACTCACT +
Preference number: 5 (lower is better)
Translates to: RSMGLGLLSPRNMQR*EIKRILLAEIPTLT
Trigger: AGTGAGTGTTGGGATCTCAGCTAACAGTATCCTTTTTATTTCCCACCTCTGCATGTTCCTTGGTGAAAGCAGGCCTAAGCCCATTGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075797.2
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CAA 90 bp CCCCTTCTCCCATGTCTCATCAGACCACTATGGATTAAAATTGAACTTCAACTGAACTCATGGGTAAAATaGAGCAGGACTGAGAAACAT +
Preference number: 5 (lower is better)
Translates to: PLLPCLIRPLWIKIELQLNSWVK*SRTEKH
Trigger: ATGTTTCTCAGTCCTGCTCAATTTTACCCATGAGTT...CAGTTGAAGTTCAATTTTAATCCATAGTGGTCTGATGAGACATGGGAGAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS-3UTR CAA 90 bp AAACTCACTGATAGAGGTGACAACTTCCTGAACAGAATACAATGGGTTAGGCAAAACTCATGGGTAAAATaGAGCAGGACTGAGAAACAT +
Preference number: 5 (lower is better)
Translates to: KLTDRGDNFLNRIQWVRQNSWVK*SRTEKH
Trigger: ATGTTTCTCAGTCCTGCTCAATTTTACCCATGAGTT...TTGCCTAACCCATTGTATTCTGTTCAGGAAGTTGTCACCTCTATCAGTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS CCA 72 bp GGCTTAGGCCTGCTTTCACCAAGGAACATGCAGAGGTaGGAAATAAAAAGGATACTGTTAGCTGAGATCCCA +
Preference number: 6 (lower is better)
Translates to: GLGLLSPRNMQR*EIKRILLAEIP
Trigger: TGGGATCTCAGCTAACAGTATCCTTTTTATTTCCCACCTCTGCATGTTCCTTGGTGAAAGCAGGCCTAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075797.2
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2
CDS TCA 72 bp CATGCAGAGGTGGGAAATAAAAAGGATACTGTTAGCTaGGATCCCAACACTCACTTCAGAGAACAATATGAC +
Preference number: 6 (lower is better)
Translates to: HAEVGNKKDTVS*DPNTHFREQYD
Trigger: GTCATATTGTTCTCTGAAGTGAGTGTTGGGATCTCAGCTAACAGTATCCTTTTTATTTCCCACCTCTGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000075797.2
ENSMUST00000205088.3
ENSMUST00000226715.2
ENSMUST00000228401.2