Pregenerated sensors for VMN1R44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068234Ensembl transcript IDs: ENSMUST00000089420.6, ENSMUST00000204656.3, ENSMUST00000226120.2, ENSMUST00000226171.2, ENSMUST00000226345.2, ENSMUST00000226760.2, ENSMUST00000227047.2, ENSMUST00000227456.2, ENSMUST00000227625.2, ENSMUST00000227747.2, ENSMUST00000227888.2, ENSMUST00000228183.2, ENSMUST00000228700.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTGGGTGGGCCATAAGGGCCTATTGATGGAATTCCAGAGTACCTaGCCTCTATACTCCATGAGCACCTGCACTCAAGTACAAACACAA | + |
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Preference number: 1 (lower is better) Translates to: HWVGHKGLLMEFQST*PLYSMSTCTQVQTQ Trigger: TTGTGTTTGTACTTGAGTGCAGGTGCTCATGGAGTATAGAGGTCAGGTACTCTGGAATTCCATCAATAGGCCCTTATGGCCCACCCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGGATCATGTaGCAAATGGCTCTCAAAATAATGTTTCCTTATTATTTTGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCVFWIM*QMALKIMFPYYFAK Trigger: TTTGGCAAAATAATAAGGAAACATTATTTTGAGAGCCATTTGTCACATGATCCAGAACACACACACACACACACACACACACACACACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR GCA 90 bp | TACTCCATGAGCACCTGCACTCAAGTACAAACACAAACACACATATaGACACACACACATGCACACAAATACAAACAAACACTGATTAAT | + |
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Preference number: 1 (lower is better) Translates to: YSMSTCTQVQTQTHI*THTHAHKYKQTLIN Trigger: ATTAATCAGTGTTTGTTTGTATTTGTGTGCATGTGTGTGTGTGCATATGTGTGTTTGTGTTTGTACTTGAGTGCAGGTGCTCATGGAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACGAGAGAAAGTTCATGTaGTATCTGAGAGGGTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: CHGSHVDRSWNVSERWFHERKFM*YLRGYV Trigger: CACATACCCTCTCAGATATCACATGAACTTTCTCTC...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGGAGAGAAAGTTCATGTaGTATCTGAGAGGGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: LILRRLKVYKHTHWVGHKERKFM*YLRGYV Trigger: CACATACCCTCTCAGATATCACATGAACTTTCTCTC...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGCTCACAGATCTCCTTTaGAAATGCTCTGAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LILRRLKVYKHTHWVGHKLTDLL*KCSERK Trigger: CTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAG...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACCTCACAGATCTCCTTTaGAAATGCTCTGAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: CHGSHVDRSWNVSERWFHLTDLL*KCSERK Trigger: CTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAG...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR GCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGTACTCCATGAGCACCTaGACTCAAGTACAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: LILRRLKVYKHTHWVGHKYSMST*TQVQTQ Trigger: TTGTGTTTGTACTTGAGTGCAGGTGCTCATGGAGTA...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACTACTCCATGAGCACCTaGACTCAAGTACAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: CHGSHVDRSWNVSERWFHYSMST*TQVQTQ Trigger: TTGTGTTTGTACTTGAGTGCAGGTGCTCATGGAGTA...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGGAGAGAAAGTTCATGTaGTATCTGAGAGGGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: WKCHGSHVDRSWNVSERWERKFM*YLRGYV Trigger: CACATACCCTCTCAGATATCACATGAACTTTCTCTC...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGCTCACAGATCTCCTTTaGAAATGCTCTGAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: WKCHGSHVDRSWNVSERWLTDLL*KCSERK Trigger: CTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAG...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACAACTTAAAAACAACGTaGAATCCAGGACAAACGGGA | + |
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Preference number: 2 (lower is better) Translates to: CHGSHVDRSWNVSERWFHNLKTT*NPGQTG Trigger: TCCCGTTTGTCCTGGATTTCACGTTGTTTTTAAGTT...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGCACAGTAAATCATCCTaGTCCTTAGAAGACTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: WKCHGSHVDRSWNVSERWHSKSS*SLEDSR Trigger: CCTTGAGTCTTCTAAGGATCAGGATGATTTACTGTG...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTACTCCATGAGCACCTaGACTCAAGTACAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: WKCHGSHVDRSWNVSERWYSMST*TQVQTQ Trigger: TTGTGTTTGTACTTGAGTGCAGGTGCTCATGGAGTA...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACCCTTTGAAAATGCTCTaGGAGAAAGTTCATGTGATA | + |
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Preference number: 2 (lower is better) Translates to: CHGSHVDRSWNVSERWFHPLKML*EKVHVI Trigger: TATCACATGAACTTTCTCTCAGAGCATTTTCAAAGG...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGCCTTTGAAAATGCTCTaGGAGAAAGTTCATGTGATA | + |
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Preference number: 2 (lower is better) Translates to: LILRRLKVYKHTHWVGHKPLKML*EKVHVI Trigger: TATCACATGAACTTTCTCTCAGAGCATTTTCAAAGG...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGAACTTAAAAACAACGTaGAATCCAGGACAAACGGGA | + |
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Preference number: 2 (lower is better) Translates to: WKCHGSHVDRSWNVSERWNLKTT*NPGQTG Trigger: TCCCGTTTGTCCTGGATTTCACGTTGTTTTTAAGTT...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGCCTTTGAAAATGCTCTaGGAGAAAGTTCATGTGATA | + |
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Preference number: 2 (lower is better) Translates to: WKCHGSHVDRSWNVSERWPLKML*EKVHVI Trigger: TATCACATGAACTTTCTCTCAGAGCATTTTCAAAGG...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGGAGAGAAAGTTCATGTaGTATCTGAGAGGGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEERKFM*YLRGYV Trigger: CACATACCCTCTCAGATATCACATGAACTTTCTCTC...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGCTCACAGATCTCCTTTaGAAATGCTCTGAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: NYWKCHGSHVDRSWNVSELTDLL*KCSERK Trigger: CTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAG...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGCACAGTAAATCATCCTaGTCCTTAGAAGACTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEHSKSS*SLEDSR Trigger: CCTTGAGTCTTCTAAGGATCAGGATGATTTACTGTG...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR GCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGTACTCCATGAGCACCTaGACTCAAGTACAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEYSMST*TQVQTQ Trigger: TTGTGTTTGTACTTGAGTGCAGGTGCTCATGGAGTA...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAACTTAAAAACAACGTaGAATCCAGGACAAACGGGA | + |
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Preference number: 2 (lower is better) Translates to: NYWKCHGSHVDRSWNVSENLKTT*NPGQTG Trigger: TCCCGTTTGTCCTGGATTTCACGTTGTTTTTAAGTT...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGGAGAGAAAGTTCATGTaGTATCTGAGAGGGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: QINYWKCHGSHVDRSWNVERKFM*YLRGYV Trigger: CACATACCCTCTCAGATATCACATGAACTTTCTCTC...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGCCTTTGAAAATGCTCTaGGAGAAAGTTCATGTGATA | + |
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Preference number: 2 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEPLKML*EKVHVI Trigger: TATCACATGAACTTTCTCTCAGAGCATTTTCAAAGG...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGCTCACAGATCTCCTTTaGAAATGCTCTGAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: QINYWKCHGSHVDRSWNVLTDLL*KCSERK Trigger: CTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAG...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGCACAGTAAATCATCCTaGTCCTTAGAAGACTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: QINYWKCHGSHVDRSWNVHSKSS*SLEDSR Trigger: CCTTGAGTCTTCTAAGGATCAGGATGATTTACTGTG...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTACTCCATGAGCACCTaGACTCAAGTACAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: QINYWKCHGSHVDRSWNVYSMST*TQVQTQ Trigger: TTGTGTTTGTACTTGAGTGCAGGTGCTCATGGAGTA...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGAACTTAAAAACAACGTaGAATCCAGGACAAACGGGA | + |
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Preference number: 2 (lower is better) Translates to: QINYWKCHGSHVDRSWNVNLKTT*NPGQTG Trigger: TCCCGTTTGTCCTGGATTTCACGTTGTTTTTAAGTT...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGCCTTTGAAAATGCTCTaGGAGAAAGTTCATGTGATA | + |
|
Preference number: 2 (lower is better) Translates to: QINYWKCHGSHVDRSWNVPLKML*EKVHVI Trigger: TATCACATGAACTTTCTCTCAGAGCATTTTCAAAGG...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACGGCCATAAGGGCCTATaGATGGAATTCCAGAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: CHGSHVDRSWNVSERWFHGHKGL*MEFQST Trigger: GGTACTCTGGAATTCCATCAATAGGCCCTTATGGCC...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR TCA 72 bp | ACAAACACACGCACTGGGTGGGCCATAAGGGCCTATTaGTGGAATTCCAGAGTACCTGACCTCTATACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TNTRTGWAIRAY*WNSRVPDLYTP Trigger: TGGAGTATAGAGGTCAGGTACTCTGGAATTCCATCAATAGGCCCTTATGGCCCACCCAGTGCGTGTGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR-3UTR CAA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGGGCCATAAGGGCCTATaGATGGAATTCCAGAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: WKCHGSHVDRSWNVSERWGHKGL*MEFQST Trigger: GGTACTCTGGAATTCCATCAATAGGCCCTTATGGCC...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGGGCCATAAGGGCCTATaGATGGAATTCCAGAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEGHKGL*MEFQST Trigger: GGTACTCTGGAATTCCATCAATAGGCCCTTATGGCC...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR CCA 72 bp | TATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATaGAATGTGTCAGAGAGATGGTTCCACAGTAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: YWKCHGSHVDRS*NVSERWFHSKS Trigger: TGATTTACTGTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LILRRLKVYKHTHWVGHKLWGCF*RKAGAA Trigger: CGCAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CHGSHVDRSWNVSERWFHLWGCF*RKAGAA Trigger: CGCAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWLWGCF*RKAGAA Trigger: CGCAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CCAGGACAAACGGGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAACTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGQTGAVSQISFENALRELWGCF*RKAGAA Trigger: CGCAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...TTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCCCGTTTGTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | CCAGGACAAACGGGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAATTGAAGAAAGGCTGGTaGTGCGAAGATGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGQTGAVSQISFENALRELKKGW*CEDAGP Trigger: AGGCCCAGCATCTTCGCAGCACCAGCCTTTCTTCAA...TTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCCCGTTTGTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTGAAGAAAGGCTGGTaGTGCGAAGATGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWLKKGW*CEDAGP Trigger: AGGCCCAGCATCTTCGCAGCACCAGCCTTTCTTCAA...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGAGATCAATGGGCTTATaGCTGTTCTCACCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LILRRLKVYKHTHWVGHKRSMGL*LFSPRS Trigger: GCTCCTTGGTGAGAACAGGCATAAGCCCATTGATCT...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACAGATCAATGGGCTTATaGCTGTTCTCACCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CHGSHVDRSWNVSERWFHRSMGL*LFSPRS Trigger: GCTCCTTGGTGAGAACAGGCATAAGCCCATTGATCT...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NYWKCHGSHVDRSWNVSELWGCF*RKAGAA Trigger: CGCAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | GGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAAAGTTCATGTGATCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GAVSQISFENALRESSCDLWGCF*RKAGAA Trigger: CGCAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...ATCACATGAACTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | CCAGGACAAACGGGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAAAGATCAATGGGCTTATaGCTGTTCTCACCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGQTGAVSQISFENALRERSMGL*LFSPRS Trigger: GCTCCTTGGTGAGAACAGGCATAAGCCCATTGATCT...TTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCCCGTTTGTCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGAGATCAATGGGCTTATaGCTGTTCTCACCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWRSMGL*LFSPRS Trigger: GCTCCTTGGTGAGAACAGGCATAAGCCCATTGATCT...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGCCGGTGTGGAAAACATaGTTGTTCTGGAGTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LILRRLKVYKHTHWVGHKPVWKT*LFWSNS Trigger: TGAGTTACTCCAGAACAAGCATGTTTTCCACACCGG...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACCCGGTGTGGAAAACATaGTTGTTCTGGAGTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: CHGSHVDRSWNVSERWFHPVWKT*LFWSNS Trigger: TGAGTTACTCCAGAACAAGCATGTTTTCCACACCGG...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACCTTGAACTTCATCCTTaGGTGGAAGATAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CHGSHVDRSWNVSERWFHLELHP*VEDNSV Trigger: GACACTGTTATCTTCCACTCAAGGATGAAGTTCAAG...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGCTTGAACTTCATCCTTaGGTGGAAGATAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LILRRLKVYKHTHWVGHKLELHP*VEDNSV Trigger: GACACTGTTATCTTCCACTCAAGGATGAAGTTCAAG...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACATATTGAGCCATCCTTaGACTTCATCCTTGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHGSHVDRSWNVSERWFHILSHP*TSSLSG Trigger: TCCACTCAAGGATGAAGTTCAAGGATGGCTCAATAT...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGATATTGAGCCATCCTTaGACTTCATCCTTGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LILRRLKVYKHTHWVGHKILSHP*TSSLSG Trigger: TCCACTCAAGGATGAAGTTCAAGGATGGCTCAATAT...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | CCAGGACAAACGGGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAACCGGTGTGGAAAACATaGTTGTTCTGGAGTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGQTGAVSQISFENALREPVWKT*LFWSNS Trigger: TGAGTTACTCCAGAACAAGCATGTTTTCCACACCGG...TTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCCCGTTTGTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGCCGGTGTGGAAAACATaGTTGTTCTGGAGTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWPVWKT*LFWSNS Trigger: TGAGTTACTCCAGAACAAGCATGTTTTCCACACCGG...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGTTGAAGAAAGGCTGGTaGTGCGAAGATGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NYWKCHGSHVDRSWNVSELKKGW*CEDAGP Trigger: AGGCCCAGCATCTTCGCAGCACCAGCCTTTCTTCAA...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGATACATAAAATTCTCTaGGGTCAAATTGGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LILRRLKVYKHTHWVGHKIHKIL*GQIGGH Trigger: GTGACCCCCAATTTGACCTCAGAGAATTTTATGTAT...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACATACATAAAATTCTCTaGGGTCAAATTGGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CHGSHVDRSWNVSERWFHIHKIL*GQIGGH Trigger: GTGACCCCCAATTTGACCTCAGAGAATTTTATGTAT...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QINYWKCHGSHVDRSWNVLWGCF*RKAGAA Trigger: CGCAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CCAGGACAAACGGGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAACTTGAACTTCATCCTTaGGTGGAAGATAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGQTGAVSQISFENALRELELHP*VEDNSV Trigger: GACACTGTTATCTTCCACTCAAGGATGAAGTTCAAG...TTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCCCGTTTGTCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGCTTGAACTTCATCCTTaGGTGGAAGATAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWLELHP*VEDNSV Trigger: GACACTGTTATCTTCCACTCAAGGATGAAGTTCAAG...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGATATTGAGCCATCCTTaGACTTCATCCTTGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWILSHP*TSSLSG Trigger: TCCACTCAAGGATGAAGTTCAAGGATGGCTCAATAT...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGATAAGCAGCATTAGTTaGGTTAGGGACAAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWISSIS*VRDKKA Trigger: TGCTTTCTTGTCCCTAACTCAACTAATGCTGCTTAT...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACCTAAAAAGTGACTGCTaGAAGACATATAGAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: CHGSHVDRSWNVSERWFHLKSDC*KTYREH Trigger: GTGTTCTCTATATGTCTTTCAGCAGTCACTTTTTAG...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGATACATAAAATTCTCTaGGGTCAAATTGGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWIHKIL*GQIGGH Trigger: GTGACCCCCAATTTGACCTCAGAGAATTTTATGTAT...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | GGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAAAGTTCATGTGATAGATCAATGGGCTTATaGCTGTTCTCACCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAVSQISFENALRESSCDRSMGL*LFSPRS Trigger: GCTCCTTGGTGAGAACAGGCATAAGCCCATTGATCT...ATCACATGAACTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTTGAAGAAAGGCTGGTaGTGCGAAGATGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QINYWKCHGSHVDRSWNVLKKGW*CEDAGP Trigger: AGGCCCAGCATCTTCGCAGCACCAGCCTTTCTTCAA...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR CCA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACAAAACATGCTTGTTCTaGAGTAACTCATGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHGSHVDRSWNVSERWFHKTCLF*SNSWVE Trigger: TTCTACCCATGAGTTACTCCAGAACAAGCATGTTTT...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR CCA 90 bp | CTGATCCTTAGAAGACTCAAGGTCTACAAACACACGCACTGGGTGGGCCATAAGAAAACATGCTTGTTCTaGAGTAACTCATGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LILRRLKVYKHTHWVGHKKTCLF*SNSWVE Trigger: TTCTACCCATGAGTTACTCCAGAACAAGCATGTTTT...CTTATGGCCCACCCAGTGCGTGTGTTTGTAGACCTTGAGTCTTCTAAGGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGCTAAAAAGTGACTGCTaGAAGACATATAGAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWLKSDC*KTYREH Trigger: GTGTTCTCTATATGTCTTTCAGCAGTCACTTTTTAG...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGCCGGTGTGGAAAACATaGTTGTTCTGGAGTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEPVWKT*LFWSNS Trigger: TGAGTTACTCCAGAACAAGCATGTTTTCCACACCGG...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | GGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAAAGTTCATGTGATCCGGTGTGGAAAACATaGTTGTTCTGGAGTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GAVSQISFENALRESSCDPVWKT*LFWSNS Trigger: TGAGTTACTCCAGAACAAGCATGTTTTCCACACCGG...ATCACATGAACTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR CCA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGAAAACATGCTTGTTCTaGAGTAACTCATGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WKCHGSHVDRSWNVSERWKTCLF*SNSWVE Trigger: TTCTACCCATGAGTTACTCCAGAACAAGCATGTTTT...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR CCA 90 bp | CCAGGACAAACGGGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAAAAAACATGCTTGTTCTaGAGTAACTCATGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGQTGAVSQISFENALREKTCLF*SNSWVE Trigger: TTCTACCCATGAGTTACTCCAGAACAAGCATGTTTT...TTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCCCGTTTGTCCTGG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGCTTGAACTTCATCCTTaGGTGGAAGATAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NYWKCHGSHVDRSWNVSELELHP*VEDNSV Trigger: GACACTGTTATCTTCCACTCAAGGATGAAGTTCAAG...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | GGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAAAGTTCATGTGATCTTGAACTTCATCCTTaGGTGGAAGATAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GAVSQISFENALRESSCDLELHP*VEDNSV Trigger: GACACTGTTATCTTCCACTCAAGGATGAAGTTCAAG...ATCACATGAACTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | GGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAAAGTTCATGTGATATATTGAGCCATCCTTaGACTTCATCCTTGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAVSQISFENALRESSCDILSHP*TSSLSG Trigger: TCCACTCAAGGATGAAGTTCAAGGATGGCTCAATAT...ATCACATGAACTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | AATACTTTCATGTATCAATTTAAGATGCAGAATGTTACCACTATGCCACCATCCTTGAAGAAAGGCTGGTaGTGCGAAGATGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTFMYQFKMQNVTTMPPSLKKGW*CEDAGP Trigger: AGGCCCAGCATCTTCGCAGCACCAGCCTTTCTTCAA...GGATGGTGGCATAGTGGTAACATTCTGCATCTTAAATTGATACATGAAAGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGATAAGCAGCATTAGTTaGGTTAGGGACAAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEISSIS*VRDKKA Trigger: TGCTTTCTTGTCCCTAACTCAACTAATGCTGCTTAT...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAAGGCACCTGAGATGTaGTGGGGATATTTATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEKAPEM*WGYLCL Trigger: TAAACATAAATATCCCCATCACATCTCAGGTGCCTT...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | GGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAAAGTTCATGTGATATACATAAAATTCTCTaGGGTCAAATTGGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GAVSQISFENALRESSCDIHKIL*GQIGGH Trigger: GTGACCCCCAATTTGACCTCAGAGAATTTTATGTAT...ATCACATGAACTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGATACATAAAATTCTCTaGGGTCAAATTGGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEIHKIL*GQIGGH Trigger: GTGACCCCCAATTTGACCTCAGAGAATTTTATGTAT...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | GGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAAAGTTCATGTGATCTAAAAAGTGACTGCTaGAAGACATATAGAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GAVSQISFENALRESSCDLKSDC*KTYREH Trigger: GTGTTCTCTATATGTCTTTCAGCAGTCACTTTTTAG...ATCACATGAACTTTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGCTTGAACTTCATCCTTaGGTGGAAGATAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QINYWKCHGSHVDRSWNVLELHP*VEDNSV Trigger: GACACTGTTATCTTCCACTCAAGGATGAAGTTCAAG...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGATATTGAGCCATCCTTaGACTTCATCCTTGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QINYWKCHGSHVDRSWNVILSHP*TSSLSG Trigger: TCCACTCAAGGATGAAGTTCAAGGATGGCTCAATAT...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGATAAGCAGCATTAGTTaGGTTAGGGACAAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QINYWKCHGSHVDRSWNVISSIS*VRDKKA Trigger: TGCTTTCTTGTCCCTAACTCAACTAATGCTGCTTAT...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | CAAATTAATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGATACATAAAATTCTCTaGGGTCAAATTGGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QINYWKCHGSHVDRSWNVIHKIL*GQIGGH Trigger: GTGACCCCCAATTTGACCTCAGAGAATTTTATGTAT...CACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATTAATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR GCA 90 bp | AATACTTTCATGTATCAATTTAAGATGCAGAATGTTACCACTATGCCACCATCCCCGGTGTGGAAAACATaGTTGTTCTGGAGTAACTCA | + |
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Preference number: 4 (lower is better) Translates to: NTFMYQFKMQNVTTMPPSPVWKT*LFWSNS Trigger: TGAGTTACTCCAGAACAAGCATGTTTTCCACACCGG...GGATGGTGGCATAGTGGTAACATTCTGCATCTTAAATTGATACATGAAAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | AATACTTTCATGTATCAATTTAAGATGCAGAATGTTACCACTATGCCACCATCCCTTGAACTTCATCCTTaGGTGGAAGATAACAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: NTFMYQFKMQNVTTMPPSLELHP*VEDNSV Trigger: GACACTGTTATCTTCCACTCAAGGATGAAGTTCAAG...GGATGGTGGCATAGTGGTAACATTCTGCATCTTAAATTGATACATGAAAGTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| 3UTR CAA 72 bp | CACTATGCCACCATCCATAGATCTGATGATAACATATaGGATTATATTCACAGTCCATACCCATCACTGAAT | + |
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Preference number: 4 (lower is better) Translates to: HYATIHRSDDNI*DYIHSPYPSLN Trigger: ATTCAGTGATGGGTATGGACTGTGAATATAATCCAATATGTTATCATCAGATCTATGGATGGTGGCATAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000089420.6 ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | AATACTTTCATGTATCAATTTAAGATGCAGAATGTTACCACTATGCCACCATCCATAAGCAGCATTAGTTaGGTTAGGGACAAGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: NTFMYQFKMQNVTTMPPSISSIS*VRDKKA Trigger: TGCTTTCTTGTCCCTAACTCAACTAATGCTGCTTAT...GGATGGTGGCATAGTGGTAACATTCTGCATCTTAAATTGATACATGAAAGTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | AATACTTTCATGTATCAATTTAAGATGCAGAATGTTACCACTATGCCACCATCCATACATAAAATTCTCTaGGGTCAAATTGGGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: NTFMYQFKMQNVTTMPPSIHKIL*GQIGGH Trigger: GTGACCCCCAATTTGACCTCAGAGAATTTTATGTAT...GGATGGTGGCATAGTGGTAACATTCTGCATCTTAAATTGATACATGAAAGTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR TCA 90 bp | AATACTTTCATGTATCAATTTAAGATGCAGAATGTTACCACTATGCCACCATCCCTAAAAAGTGACTGCTaGAAGACATATAGAGAACAC | + |
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Preference number: 4 (lower is better) Translates to: NTFMYQFKMQNVTTMPPSLKSDC*KTYREH Trigger: GTGTTCTCTATATGTCTTTCAGCAGTCACTTTTTAG...GGATGGTGGCATAGTGGTAACATTCTGCATCTTAAATTGATACATGAAAGTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR CCA 90 bp | AATACTTTCATGTATCAATTTAAGATGCAGAATGTTACCACTATGCCACCATCCAAAACATGCTTGTTCTaGAGTAACTCATGGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: NTFMYQFKMQNVTTMPPSKTCLF*SNSWVE Trigger: TTCTACCCATGAGTTACTCCAGAACAAGCATGTTTT...GGATGGTGGCATAGTGGTAACATTCTGCATCTTAAATTGATACATGAAAGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR CAA 90 bp | TGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTTCCACTGGGGGTCACAGTCATaGATACTAAAAAGTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: CHGSHVDRSWNVSERWFHWGSQS*ILKSDC Trigger: GCAGTCACTTTTTAGTATCAATGACTGTGACCCCCA...GTGGAACCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR CAA 90 bp | CCAGGACAAACGGGAGCTGTCTCACAGATCTCCTTTGAAAATGCTCTGAGAGAATGGGGGTCACAGTCATaGATACTAAAAAGTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: PGQTGAVSQISFENALREWGSQS*ILKSDC Trigger: GCAGTCACTTTTTAGTATCAATGACTGTGACCCCCA...TTCTCTCAGAGCATTTTCAAAGGAGATCTGTGAGACAGCTCCCGTTTGTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR CAA 90 bp | TGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGAGATGGTGGGGGTCACAGTCATaGATACTAAAAAGTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: WKCHGSHVDRSWNVSERWWGSQS*ILKSDC Trigger: GCAGTCACTTTTTAGTATCAATGACTGTGACCCCCA...CCATCTCTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS-3UTR CAA 90 bp | AATTATTGGAAATGTCATGGCTCCCACGTAGATAGGTCATGGAATGTGTCAGAGTGGGGGTCACAGTCATaGATACTAAAAAGTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: NYWKCHGSHVDRSWNVSEWGSQS*ILKSDC Trigger: GCAGTCACTTTTTAGTATCAATGACTGTGACCCCCA...CTCTGACACATTCCATGACCTATCTACGTGGGAGCCATGACATTTCCAATAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS TCA 90 bp | ACCAAGGAGCATGCAGAGGTAGGCTATAAAAAGGATACTGTTAGCTaGGATCCCAACACTCACTTCAGCAAGCAAGGTGATTTTTATGTT | + |
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Preference number: 5 (lower is better) Translates to: TKEHAEVGYKKDTVS*DPNTHFSKQGDFYV Trigger: AACATAAAAATCACCTTGCTTGCTGAAGTGAGTGTTGGGATCTCAGCTAACAGTATCCTTTTTATAGCCTACCTCTGCATGCTCCTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000089420.6 ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS-3UTR CAA 90 bp | AATACTTTCATGTATCAATTTAAGATGCAGAATGTTACCACTATGCCACCATCCTGGGGGTCACAGTCATaGATACTAAAAAGTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: NTFMYQFKMQNVTTMPPSWGSQS*ILKSDC Trigger: GCAGTCACTTTTTAGTATCAATGACTGTGACCCCCA...GGATGGTGGCATAGTGGTAACATTCTGCATCTTAAATTGATACATGAAAGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 12 transcripts: ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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| CDS CAA 72 bp | GAGGCCCCTCAGAAACCTGTGCAAATAGATAAGGGATaGGCATGTGGTAGAATCCCATCTCCCCCAAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: EAPQKPVQIDKG*ACGRIPSPPRH Trigger: ATGCCTTGGGGGAGATGGGATTCTACCACATGCCAATCCCTTATCTATTTGCACAGGTTTCTGAGGGGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000089420.6 ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS TCA 72 bp | CATGCAGAGGTAGGCTATAAAAAGGATACTGTTAGCTaGGATCCCAACACTCACTTCAGCAAGCAAGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: HAEVGYKKDTVS*DPNTHFSKQGD Trigger: ATCACCTTGCTTGCTGAAGTGAGTGTTGGGATCTCAGCTAACAGTATCCTTTTTATAGCCTACCTCTGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000089420.6 ENSMUST00000204656.3 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000228700.2 |
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| CDS CAA 72 bp | ACAATAATTTGGAAACAGTACAATATTGAGCCATCCTaGAACTTCATCCTTGAGTGGAAGATAACAGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TIIWKQYNIEPS*NFILEWKITVS Trigger: GGACACTGTTATCTTCCACTCAAGGATGAAGTTCAAGGATGGCTCAATATTGTACTGTTTCCAAATTATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000089420.6 ENSMUST00000204656.3 ENSMUST00000226120.2 ENSMUST00000226171.2 ENSMUST00000226345.2 ENSMUST00000226760.2 ENSMUST00000227047.2 ENSMUST00000227456.2 ENSMUST00000227625.2 ENSMUST00000227747.2 ENSMUST00000227888.2 ENSMUST00000228183.2 ENSMUST00000228700.2 |
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