RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R43 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000068231

Ensembl transcript IDs: ENSMUST00000089418.5, ENSMUST00000226741.2, ENSMUST00000226983.2, ENSMUST00000228709.2

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTGGCAGAGTACCAAAATGCCCTGCTGTAAGAGTCTCTGGATGTaGGGTCTGATCCCTTCTCTTGCCTCTCAGCTCATGGGGTACTGG +
Preference number: 1 (lower is better)
Translates to: EWQSTKMPCCKSLWM*GLIPSLASQLMGYW
Trigger: CCAGTACCCCATGAGCTGAGAGGCAAGAGAAGGGATCAGACCCCACATCCAGAGACTCTTACAGCAGGGCATTTTGGTACTCTGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp TTCATGCAAACGGTATTCTTCTTTCAGCCCCAGGGCCAGCACCACTaGGGTGGGAGGTTCCCAGGTTACCCTAGGTCCATCAGAAGTGAA +
Preference number: 1 (lower is better)
Translates to: FMQTVFFFQPQGQHH*GGRFPGYPRSIRSE
Trigger: TTCACTTCTGATGGACCTAGGGTAACCTGGGAACCTCCCACCTCAGTGGTGCTGGCCCTGGGGCTGAAAGAAGAATACCGTTTGCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp GTAGGCTCCTGGCCTGTCTCCCCGAAGTCTTTTTCCTGGAGTATATaGGGAGCATCCTGCATTAGTCAGGGCACAGGCACTGCATTCTTT +
Preference number: 1 (lower is better)
Translates to: VGSWPVSPKSFSWSI*GASCISQGTGTAFF
Trigger: AAAGAATGCAGTGCCTGTGCCCTGACTAATGCAGGATGCTCCCCATATACTCCAGGAAAAAGACTTCGGGGAGACAGGCCAGGAGCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 90 bp GCACCTCCAGGGGAGAATCTCTTTCCTGCCTGGAGAGGTAGATCCTaGGCATCAGCATCAGGAATATCTCAAGAATCTAAGCTGGCTACC +
Preference number: 1 (lower is better)
Translates to: APPGENLFPAWRGRS*ASASGISQESKLAT
Trigger: GGTAGCCAGCTTAGATTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAAGAGATTCTCCCCTGGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp CAGGCTTTGGTAGTGAGTCATGAGGGCATCAGTCATCCATCTGTCTaGCAGCTGTCTGATGATACTTTCCAGGGCATGGGGTGCCAGTAT +
Preference number: 1 (lower is better)
Translates to: QALVVSHEGISHPSV*QLSDDTFQGMGCQY
Trigger: ATACTGGCACCCCATGCCCTGGAAAGTATCATCAGACAGCTGCCAGACAGATGGATGACTGATGCCCTCATGACTCACTACCAAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 90 bp TTCAGGGGTGTTGAAGTCCCAGTCAGGTTGGTTGAGAGGAAACCCTaGATCTATCTCATTAGGCAAGTTAGTGGGCACCCCAATAGCACC +
Preference number: 1 (lower is better)
Translates to: FRGVEVPVRLVERKP*IYLIRQVSGHPNST
Trigger: GGTGCTATTGGGGTGCCCACTAACTTGCCTAATGAGATAGATGCAGGGTTTCCTCTCAACCAACCTGACTGGGACTTCAACACCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 90 bp TTACTTAGCCAAATTGGTGTGGCATCAAGCAGCCCTTCTGAGACCTaGCACGAGAGCCCAGCAATAGACTGTCAGTCTCTCCCTTCATTC +
Preference number: 1 (lower is better)
Translates to: LLSQIGVASSSPSET*HESPAIDCQSLPSF
Trigger: GAATGAAGGGAGAGACTGACAGTCTATTGCTGGGCTCTCGTGGCAGGTCTCAGAAGGGCTGCTTGATGCCACACCAATTTGGCTAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp TCTCCGAACCCAAATGCACCTCCAGGGGAGAATCTCTTTCCTGCCTaGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAA +
Preference number: 1 (lower is better)
Translates to: SPNPNAPPGENLFPA*RGRSCASASGISQE
Trigger: TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAAGAGATTCTCCCCTGGAGGTGCATTTGGGTTCGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp GAAGGAGGAGGTACAGGGTTTAAGGAGAGGTGTGGGGTAGAGTCTTaGACCTCTAGGAGGCTGACCAGTGTGATGTGGATGTTTTCTGTT +
Preference number: 1 (lower is better)
Translates to: EGGGTGFKERCGVES*TSRRLTSVMWMFSV
Trigger: AACAGAAAACATCCACATCACACTGGTCAGCCTCCTAGAGGTTCAAGACTCTACCCCACACCTCTCCTTAAACCCTGTACCTCCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp TTCCCCTCACAGTGGGGAGACTCTCACTCAAGTCTCAGGATATCATaGTGCCCAAGAACTCGCAAGAGACGGATCTTGATGCAATCAGCA +
Preference number: 1 (lower is better)
Translates to: FPSQWGDSHSSLRIS*CPRTRKRRILMQSA
Trigger: TGCTGATTGCATCAAGATCCGTCTCTTGCGAGTTCTTGGGCATCATGATATCCTGAGACTTGAGTGAGAGTCTCCCCACTGTGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp AAGTCAGTCATTTGCCTTCCTTTGGCTGCTGAATCTCGTTCCTTCTaGTGTCCTGGACAGTGTATGATGGCCACCTTAGCAGGCAGATGC +
Preference number: 1 (lower is better)
Translates to: KSVICLPLAAESRSF*CPGQCMMATLAGRC
Trigger: GCATCTGCCTGCTAAGGTGGCCATCATACACTGTCCAGGACATCAGAAGGAACGAGATTCAGCAGCCAAAGGAAGGCAAATGACTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp TGCCTGTTTGGCAGTCAAGTCAGTCATTTGCCTTCCTTTGGCTGCTaGATCTCGTTCCTTCTGATGTCCTGGACAGTGTATGATGGCCAC +
Preference number: 1 (lower is better)
Translates to: CLFGSQVSHLPSFGC*ISFLLMSWTVYDGH
Trigger: GTGGCCATCATACACTGTCCAGGACATCAGAAGGAACGAGATTCAGCAGCCAAAGGAAGGCAAATGACTGACTTGACTGCCAAACAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 90 bp GCCCAAATCACCCATTTCTCATTCACCACTGCTGTCCTGGGTTTCTaGTTATCCTTGACCACAAAGGTGCTACCATCGGGTGTACCAGTT +
Preference number: 1 (lower is better)
Translates to: AQITHFSFTTAVLGF*LSLTTKVLPSGVPV
Trigger: AACTGGTACACCCGATGGTAGCACCTTTGTGGTCAAGGATAAGCAGAAACCCAGGACAGCAGTGGTGAATGAGAAATGGGTGATTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp AAGCTAACAGATACTTATTACCATATCTGGCTGGTTTCACTTCAGTaGAGTCTACCTCCCAGTAGGCTCCTGGCCTGTCTCCCCGAAGTC +
Preference number: 1 (lower is better)
Translates to: KLTDTYYHIWLVSLQ*SLPPSRLLACLPEV
Trigger: GACTTCGGGGAGACAGGCCAGGAGCCTACTGGGAGGTAGACTTCACTGAAGTGAAACCAGCCAGATATGGTAATAAGTATCTGTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp GTCAGTCTCTCCCTTCATTCAGGGGTGTTGAAGTCCCAGTCAGGTTaGTTGAGAGGAAACCCTGCATCTATCTCATTAGGCAAGTTAGTG +
Preference number: 1 (lower is better)
Translates to: VSLSLHSGVLKSQSG*LRGNPASISLGKLV
Trigger: CACTAACTTGCCTAATGAGATAGATGCAGGGTTTCCTCTCAACCAACCTGACTGGGACTTCAACACCCCTGAATGAAGGGAGAGACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp GCATCAGCATCAGGAATATCTCAAGAATCTAAGCTGGCTACCAGTTaGCAAAAATCGGGAGTGAGCATAGGCCACCACATATATGGGGGT +
Preference number: 1 (lower is better)
Translates to: ASASGISQESKLATS*QKSGVSIGHHIYGG
Trigger: ACCCCCATATATGTGGTGGCCTATGCTCACTCCCGATTTTTGCCAACTGGTAGCCAGCTTAGATTCTTGAGATATTCCTGATGCTGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp CCTTCCAGAAATCCTAATTTCCAAGGATTGAAGGGGGAGTGCAACTaGGTCTGGTCCATGGAACCAGAGGACATCAGTTCAAAAGCTAAG +
Preference number: 1 (lower is better)
Translates to: PSRNPNFQGLKGECN*VWSMEPEDISSKAK
Trigger: CTTAGCTTTTGAACTGATGTCCTCTGGTTCCATGGACCAGACTCAGTTGCACTCCCCCTTCAATCCTTGGAAATTAGGATTTCTGGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp TTCATAGTTTGTCTACATTCCACAGTTGCTGAAATCAACCAGTCATaGGACAAGCAAGCTGAAGCTGAAAGACCCCTGCAGTGGGGAGAC +
Preference number: 1 (lower is better)
Translates to: FIVCLHSTVAEINQS*DKQAEAERPLQWGD
Trigger: GTCTCCCCACTGCAGGGGTCTTTCAGCTTCAGCTTGCTTGTCTCATGACTGGTTGATTTCAGCAACTGTGGAATGTAGACAAACTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 90 bp ACAAGTATCTGGTATCTGATGTCTTATGGCTCTTTAGGGTTTCATTaGAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCAAGTGC +
Preference number: 1 (lower is better)
Translates to: TSIWYLMSYGSLGFH*RDVDDFGAGFQCKC
Trigger: GCACTTGCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGAGCCATAAGACATCAGATACCAGATACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp AGACTAGCATTGTATCAGAGCATTCAACTGGATCCTGTGTTTAGCTaGGCTTTGTTAGGGTTGTTCCTATTCTCAGTTGTAAATGCGGCC +
Preference number: 1 (lower is better)
Translates to: RLALYQSIQLDPVFS*ALLGLFLFSVVNAA
Trigger: GGCCGCATTTACAACTGAGAATAGGAACAACCCTAACAAAGCTCAGCTAAACACAGGATCCAGTTGAATGCTCTGATACAATGCTAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp CATTCTTTTTGTACAAACATTTCCTGGAACAAAGGAGTGGTTGGGTaGAGGAATGTCACCATCTGTTTTGCGGTTAGCATATCCTGGAAC +
Preference number: 1 (lower is better)
Translates to: HSFCTNISWNKGVVG*RNVTICFAVSISWN
Trigger: GTTCCAGGATATGCTAACCGCAAAACAGATGGTGACATTCCTCCACCCAACCACTCCTTTGTTCCAGGAAATGTTTGTACAAAAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp GGTCAAGGCATTCTTTTTGTACAAACATTTCCTGGAACAAAGGAGTaGTTGGGTGGAGGAATGTCACCATCTGTTTTGCGGTTAGCATAT +
Preference number: 1 (lower is better)
Translates to: GQGILFVQTFPGTKE*LGGGMSPSVLRLAY
Trigger: ATATGCTAACCGCAAAACAGATGGTGACATTCCTCCACCCAACCACTCCTTTGTTCCAGGAAATGTTTGTACAAAAAGAATGCCTTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp GGGTTCAAAGAACGGTCAAGGCATTCTTTTTGTACAAACATTTCCTaGAACAAAGGAGTGGTTGGGTGGAGGAATGTCACCATCTGTTTT +
Preference number: 1 (lower is better)
Translates to: GFKERSRHSFCTNIS*NKGVVGWRNVTICF
Trigger: AAAACAGATGGTGACATTCCTCCACCCAACCACTCCTTTGTTCCAGGAAATGTTTGTACAAAAAGAATGCCTTGACCGTTCTTTGAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 90 bp AATATCTACTGGCATTTTGAGAACCAGTATCATATTTCCTTGAGTTaGCTGTTTGGCAGTCAAGTCAGTCATTTGCCTTCCTTTGGCTGC +
Preference number: 1 (lower is better)
Translates to: NIYWHFENQYHISLS*LFGSQVSHLPSFGC
Trigger: GCAGCCAAAGGAAGGCAAATGACTGACTTGACTGCCAAACAGGCAACTCAAGGAAATATGATACTGGTTCTCAAAATGCCAGTAGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp GGAAGTAGTCCTGAGGCAAAGAGTTTTCATGGAAACTTAGCCTCCTaGAACCTTGGCATTCTAATAGCACATATACTCATAATCTATCCC +
Preference number: 1 (lower is better)
Translates to: GSSPEAKSFHGNLAS*NLGILIAHILIIYP
Trigger: GGGATAGATTATGAGTATATGTGCTATTAGAATGCCAAGGTTCCAGGAGGCTAAGTTTCCATGAAAACTCTTTGCCTCAGGACTACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp CAGTATTGCAAGCCCATCACTTGTGTAACCCAGGAAACAAGTATCTaGTATCTGATGTCTTATGGCTCTTTAGGGTTTCATTGCAGAGAT +
Preference number: 1 (lower is better)
Translates to: QYCKPITCVTQETSI*YLMSYGSLGFHCRD
Trigger: ATCTCTGCAATGAAACCCTAAAGAGCCATAAGACATCAGATACCAGATACTTGTTTCCTGGGTTACACAAGTGATGGGCTTGCAATACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp ATACAAAGCATCCTGTGCTGGAATTGCCTTGCAATTGGAATTGATTaGACAATATACCACACCATGCCAAGGGTGTGTTTTGGTCATATG +
Preference number: 1 (lower is better)
Translates to: IQSILCWNCLAIGID*TIYHTMPRVCFGHM
Trigger: CATATGACCAAAACACACCCTTGGCATGGTGTGGTATATTGTTCAATCAATTCCAATTGCAAGGCAATTCCAGCACAGGATGCTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp TCTGTGTCTCTCCACTTAAAAGCAAAAACTAGTTGGCTGGATGGGTaGAGCTTAGAAAGCATCTTTAAGGTCCAAAGCAGTGTACCATTT +
Preference number: 1 (lower is better)
Translates to: SVSLHLKAKTSWLDG*SLESIFKVQSSVPF
Trigger: AAATGGTACACTGCTTTGGACCTTAAAGATGCTTTCTAAGCTTCACCCATCCAGCCAACTAGTTTTTGCTTTTAAGTGGAGAGACACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 90 bp GTCGTAATATCTACTGGCATTTTGAGAACCAGTATCATATTTCCTTaGGTTGCCTGTTTGGCAGTCAAGTCAGTCATTTGCCTTCCTTTG +
Preference number: 1 (lower is better)
Translates to: VVISTGILRTSIIFP*VACLAVKSVICLPL
Trigger: CAAAGGAAGGCAAATGACTGACTTGACTGCCAAACAGGCAACTCAAGGAAATATGATACTGGTTCTCAAAATGCCAGTAGATATTACGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp AGTTCTTTTTGTACAAACATTTCCTGGAACAAAGTAGTGGTTGGGTaGAGGAATGTCACCATCTGTTTTGTGGTTAGCATATCCTGGAAC +
Preference number: 1 (lower is better)
Translates to: SSFCTNISWNKVVVG*RNVTICFVVSISWN
Trigger: GTTCCAGGATATGCTAACCACAAAACAGATGGTGACATTCCTCCACCCAACCACTACTTTGTTCCAGGAAATGTTTGTACAAAAAGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp AGATTCAAGGAACGGTCAAGGAGTTCTTTTTGTACAAACATTTCCTaGAACAAAGTAGTGGTTGGGTGGAGGAATGTCACCATCTGTTTT +
Preference number: 1 (lower is better)
Translates to: RFKERSRSSFCTNIS*NKVVVGWRNVTICF
Trigger: AAAACAGATGGTGACATTCCTCCACCCAACCACTACTTTGTTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGACCGTTCCTTGAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 90 bp AAGTCACACCCAAACACAGGAATACACAATGGGCTACTAAATAGCTaGGTTGTAGTATTATTCATGAAAGGGTTAGTCAAATGGAATTCC +
Preference number: 1 (lower is better)
Translates to: KSHPNTGIHNGLLNS*VVVLFMKGLVKWNS
Trigger: GGAATTCCATTTGACTAACCCTTTCATGAATAATACTACAACCCAGCTATTTAGTAGCCCATTGTGTATTCCTGTGTTTGGGTGTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 90 bp CAAAGCAAGACATCCAGTAATTGTAGAGAAACAATTAGCCCAGAGTaGTACATATACTCCAGTAGTGACTCACATTACAGATTTAGAAAC +
Preference number: 1 (lower is better)
Translates to: QSKTSSNCRETISPE*YIYSSSDSHYRFRN
Trigger: GTTTCTAAATCTGTAATGTGAGTCACTACTGGAGTATATGTAGCACTCTGGGCTAATTGTTTCTCTACAATTACTGGATGTCTTGCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp AGGGTTGGTGGTCTCTCCTTAGTAGGAGGGTCACCGCTTCACTCGTaGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCCCT +
Preference number: 2 (lower is better)
Translates to: RVGGLSLVGGSPLHS*LQTGHWPLHGWGFP
Trigger: AGGGAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCTACTAAGGAGAGACCACCAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGCTAAGCCCCCACCAGTaGTCCAATGGTTCCTACAAA +
Preference number: 2 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWLSPHQ*SNGSYK
Trigger: TTTGTAGGAACCATTGGAGCACTGGTGGGGGCTTAG...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCTCCAGACAGGACATTaGCCCCTCCATGGTTGGGGT +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDLQTGH*PLHGWG
Trigger: ACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCTCACATCGCCAGACTaGAGCCTTATCCCAGCCATC +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDLTSPD*SLIPAI
Trigger: GATGGCTGGGATAAGGCTGCAGTCTGGCGATGTGAG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGATAGACAGCATGCTATaGATGACAATTCCGACGGCA +
Preference number: 2 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWIDSML*MTIPTA
Trigger: TGCCGTCGGAATTGTCATTCATAGCATGCTGTCTAT...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTTCCCATTGATTCCTTaGGAGCCAGGCTTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDFPLIP*EPGFRS
Trigger: GCTCCTGAAGCCTGGCTCTCAAGGAATCAATGGGAA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGCACAACATCAGTTTTaGGTCCCACCACTACTGGGG +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDAQHQF*VPPLLG
Trigger: CCCCAGTAGTGGTGGGACTCAAAACTGATGTTGTGC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCCGTTTTCTCGACAACTaGATGCCCACCTTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFRFLDN*MPTFQK
Trigger: TTTCTGGAAGGTGGGCATGCAGTTGTCGAGAAAACG...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGAAAGTAGTGGTTGGGTaGAGGAATGTCACCATCTGT +
Preference number: 2 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWKVVVG*RNVTIC
Trigger: ACAGATGGTGACATTCCTCCACCCAACCACTACTTT...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCTGCCAGTACTGGAGTaGCTGAAGATTTGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDLPVLE*LKIWRV
Trigger: GACCCTCCAAATCTTCAGCCACTCCAGTACTGGCAG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCATAGACAGCATGCTATaGATGACAATTCCGACGGCA +
Preference number: 2 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFIDSML*MTIPTA
Trigger: TGCCGTCGGAATTGTCATTCATAGCATGCTGTCTAT...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTTCATTCAGGGGTGTTaGAGTCCCAGTCAGGTTGGT +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDFIQGC*SPSQVG
Trigger: ACCAACCTGACTGGGACTTCAACACCCCTGAATGAA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGCTTATCTGCATATTTaGCAACTGGGCCACTGCAGC +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDAYLHI*QLGHCS
Trigger: GCTGCAGTGGCCCAGTTGTCAAATATGCAGATAAGC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCTAAGCCCCCACCAGTaGTCCAATGGTTCCTACAAA +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDLSPHQ*SNGSYK
Trigger: TTTGTAGGAACCATTGGAGCACTGGTGGGGGCTTAG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTGGTCAAATCAAAAGTaGCCTCCAGGGGCCAACCAA +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDWSNQK*PPGANQ
Trigger: TTGGTTGGCCCCTGGAGGGCACTTTTGATTTGACCA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTCTGCAAAACCCAGCTaGTCCCAGGAACTCTCTTAC +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDSAKPS*SQELSY
Trigger: GTAAGAGAGTTCCTGGGAGCAGCTGGGTTTTGCAGA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGATCAGAGCATTCAACTaGATCCTGTGTTTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWIRAFN*ILCLAE
Trigger: CTCAGCTAAACACAGGATCCAGTTGAATGCTCTGAT...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGGTGGTTAGCATATCCTaGAACATTGAGTCACAGAGT +
Preference number: 2 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWVVSIS*NIESQS
Trigger: ACTCTGTGACTCAATGTTCCAGGATATGCTAACCAC...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTCTCCAGACAGGACATTaGCCCCTCCATGGTTGGGGT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFLQTGH*PLHGWG
Trigger: ACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAG...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAACTCCCAGTAGGCTCCTaGCCTGTCTCCCCGAAGTCT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQELPVGS*PVSPKS
Trigger: AGACTTCGGGGAGACAGGCCAGGAGCCTACTGGGAG...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGTTGACATCTGTGCCTaGGATCTCCGAACCCAAATG +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDVDICA*DLRTQM
Trigger: CATTTGGGTTCGGAGATCCCAGGCACAGATGTCAAC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp GCTCTACCGAGTCTTGAAGAACCTCTCTTACCTTACTTAGCCAAATaGGTGTGGCATCAAGCAGCCCTTCTGAGACCTGCCACGAGAGCC +
Preference number: 2 (lower is better)
Translates to: ALPSLEEPLLPYLAK*VWHQAALLRPATRA
Trigger: GGCTCTCGTGGCAGGTCTCAGAAGGGCTGCTTGATGCCACACCAATTTGGCTAAGTAAGGTAAGAGAGGTTCTTCAAGACTCGGTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGATCCTGTGCTGGAATTaGCTTGCAATTGGAATTGAT +
Preference number: 2 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWILCWN*LAIGID
Trigger: ATCAATTCCAATTGCAAGGCAATTCCAGCACAGGAT...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGCTGTCCTGGGTTTCTaGTTATCCTTGACCACAAAG +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDAVLGF*LSLTTK
Trigger: CTTTGTGGTCAAGGATAAGCAGAAACCCAGGACAGC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCAGCCTCCTGGAACCTTaGCATTCTAATAGCACATAT +
Preference number: 2 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFSLLEP*HSNSTY
Trigger: ATATGTGCTATTAGAATGCCAAGGTTCCAGGAGGCT...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCGGCAAAGAGTTTTCATaGAAACTTAGCCTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFGKEFS*KLSLLE
Trigger: TTCCAGGAGGCTAAGTTTCCATGAAAACTCTTTGCC...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTTAGCCAAATTGGTGTaGCATCAAGCAGCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDLAKLV*HQAALL
Trigger: CAGAAGGGCTGCTTGATGCCACACCAATTTGGCTAA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTGGGTAAGGACTCCTTaGCCACCCCAGCCCGTTAAT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFWVRTP*PPQPVN
Trigger: ATTAACGGGCTGGGGTGGCCAAGGAGTCCTTACCCA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTCACGATTGTTCAGCTTaGGTACCAGGGTGGTGGGGT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFHDCSA*VPGWWG
Trigger: ACCCCACCACCCTGGTACCCAAGCTGAACAATCGTG...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp GTGGTTCTAAGATCTCGTTTGGTCAACCTGTCTGGGAAACACCATTaGAGACCCCATGTTCTCCCTCACAGACATGTGGAGAGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: VVLRSRLVNLSGKHH*RPHVLPHRHVERAL
Trigger: CAAGGCCCTCTCCACATGTCTGTGAGGGAGAACATGGGGTCTCAAATGGTGTTTCCCAGACAGGTTGACCAAACGAGATCTTAGAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCGTACAACTCACTATGTaGCTTCTCCACATAATTCTG +
Preference number: 2 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFVQLTM*LLHIIL
Trigger: CAGAATTATGTGGAGAAGTCACATAGTGAGTTGTAC...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATAGTTGGCTGGATGGGTaGAGCTTAGAAAGCATCTTT +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDSWLDG*SLESIF
Trigger: AAAGATGCTTTCTAAGCTTCACCCATCCAGCCAACT...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGACTTACCTGGGCAATaGAGGCAGGCCCATTATCAG +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFDLPGQ*RQAHYQ
Trigger: CTGATAATGGGCCTGCCTTCATTGCCCAGGTAAGTC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTCGGTATCCAGAGTCTaGAAAACCCAGCTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFSVSRV*KTQLLP
Trigger: TGGGAGCAGCTGGGTTTTGCAGACTCTGGATACCGA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGGGGTGGAGAGGAGTTaGAAGCATAGCGAATCTCGG +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEGVERS*KHSESR
Trigger: CCGAGATTCGCTATGCTTGCAACTCCTCTCCACCCC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTTTCTCATTCACCACTaGTGTCCTGGGTTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDFLIHH*CPGFLL
Trigger: AAGCAGAAACCCAGGACAGCAGTGGTGAATGAGAAA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGGCCAAGGGTGTGTTTTaGTCATATGTTCTATCAATT +
Preference number: 2 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWAKGVF*SYVLSI
Trigger: AATTGATAGAACATATGACCAAAACACACCCTTGGC...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCTGTACAAACATTTCCTaGAACAAAGTAGTGGTTGGG +
Preference number: 2 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFCTNIS*NKVVVG
Trigger: CCCAACCACTACTTTGTTCCAGGAAATGTTTGTACA...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGACAGAAACCGTGCAATaGAAAATACCAAAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWTETVQ*KIPKQE
Trigger: TTCTTGCTTTGGTATTTTCCATTGCACGGTTTCTGT...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCTCCAGACAGGACATTaGCCCCTCCATGGTTGGGGT +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTILQTGH*PLHGWG
Trigger: ACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCCTGGCATTGGGATTATaGGGGAGGAAGGGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCLALGL*GRKGKG
Trigger: CCCCTTCCCCTTCCTCCCCCATAATCCCAATGCCAG...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAATCCCAGGTGGGCTGGTaGGAGAACATGAGTGACTCA +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQESQVGW*ENMSDS
Trigger: TGAGTCACTCATGTTCTCCCACCAGCCCACCTGGGA...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp GTTTCAGGAGCAGCCTTTACTTTCAGTTGGTTTCCCATTGATTCCTaGAGAGCCAGGCTTCAGGAGCCTAGCTTGCAACCCTGTACCGAT +
Preference number: 2 (lower is better)
Translates to: VSGAAFTFSWFPIDS*RARLQEPSLQPCTD
Trigger: ATCGGTACAGGGTTGCAAGCTAGGCTCCTGAAGCCTGGCTCTCAAGGAATCAATGGGAAACCAACTGAAAGTAAAGGCTGCTCCTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp ACCCATTTCTCATTCACCACTGCTGTCCTGGGTTTCTGCTTATCCTaGACCACAAAGGTGCTACCATCGGGTGTACCAGTTAGAGCTTCC +
Preference number: 2 (lower is better)
Translates to: THFSFTTAVLGFCLS*TTKVLPSGVPVRAS
Trigger: GGAAGCTCTAACTGGTACACCCGATGGTAGCACCTTTGTGGTCAAGGATAAGCAGAAACCCAGGACAGCAGTGGTGAATGAGAAATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCGCAATTGGAATTGATTaGACAATATACCACACCATG +
Preference number: 2 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFAIGID*TIYHTM
Trigger: CATGGTGTGGTATATTGTTCAATCAATTCCAATTGC...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAACCCAGTCAGGTTGGTTaGGAGGAAACCCTGCATCTA +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEPSQVG*EETLHL
Trigger: TAGATGCAGGGTTTCCTCTCAACCAACCTGACTGGG...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGCACAACATCAGTTTTaGGTCCCACCACTACTGGGG +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEAQHQF*VPPLLG
Trigger: CCCCAGTAGTGGTGGGACTCAAAACTGATGTTGTGC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGCTTATCTGCATATTTaGCAACTGGGCCACTGCAGC +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFAYLHI*QLGHCS
Trigger: GCTGCAGTGGCCCAGTTGTCAAATATGCAGATAAGC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTCTTCCAGCCCATGAATaGTCCTGCAAATCTCGATGG +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFLPAHE*SCKSRW
Trigger: CCATCGAGATTTGCAGGATCATTCATGGGCTGGAAG...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTCTAAGCCCCCACCAGTaGTCCAATGGTTCCTACAAA +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFLSPHQ*SNGSYK
Trigger: TTTGTAGGAACCATTGGAGCACTGGTGGGGGCTTAG...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTGGTCAAATCAAAAGTaGCCTCCAGGGGCCAACCAA +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFWSNQK*PPGANQ
Trigger: TTGGTTGGCCCCTGGAGGGCACTTTTGATTTGACCA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTCTGATCCCTTCTCTTaGCTCTCAGCTCATGGGGTA +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFSDPFS*LSAHGV
Trigger: TACCCCATGAGCTGAGAGGCAAGAGAAGGGATCAGA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAATCGGTATCCAGAGTCTaGAAAACCCAGCTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQESVSRV*KTQLLP
Trigger: TGGGAGCAGCTGGGTTTTGCAGACTCTGGATACCGA...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTACCTTAGCAGGCAGATaGATAGCTTTGAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFTLAGR*IALSRL
Trigger: CAGCCTGCTCAAAGCTATGCATCTGCCTGCTAAGGT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCATATTTCCTTGAGTTaGCTGTTTGGCAGTCAAGTC +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDHISLS*LFGSQV
Trigger: GACTTGACTGCCAAACAGGCAACTCAAGGAAATATG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCGCCAAGGGTGTGTTTTaGTCATATGTTCTATCAATT +
Preference number: 2 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFAKGVF*SYVLSI
Trigger: AATTGATAGAACATATGACCAAAACACACCCTTGGC...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCTGACCAGTGTGATGTaGATGTTTTCTGTTTTTGGG +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDLTSVM*MFSVFG
Trigger: CCCAAAAACAGAAAACATCCACATCACACTGGTCAG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAACTGCCAGTACTGGAGTaGCTGAAGATTTGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQELPVLE*LKIWRV
Trigger: GACCCTCCAAATCTTCAGCCACTCCAGTACTGGCAG...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTTTTCCTGGAGTATATaGGGAGCATCCTGCATTAGT +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDFSWSI*GASCIS
Trigger: ACTAATGCAGGATGCTCCCCATATACTCCAGGAAAA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTGCCATGTCAGTTTTTaGGGAGCATGGGGATTACGG +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFCHVSF*GAWGLR
Trigger: CCGTAATCCCCATGCTCCCCAAAAACTGACATGGCA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAAGCTGGCTACCAGTTaGCAAAAATCGGGAGTGAGC +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFKLATS*QKSGVS
Trigger: GCTCACTCCCGATTTTTGCCAACTGGTAGCCAGCTT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp AGACAAATATGGACAGAATCTTACCTCAAAGGGGGTCCACAGAGCTaGAGGGTGGTCTCAGATCCTGGTCAAGCCCCCAAATCAAAGATC +
Preference number: 2 (lower is better)
Translates to: RQIWTESYLKGGPQS*RVVSDPGQAPKSKI
Trigger: GATCTTTGATTTGGGGGCTTGACCAGGATCTGAGACCACCCTCAAGCTCTGTGGACCCCCTTTGAGGTAAGATTCTGTCCATATTTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAAACAAAGTGCAGACTaGAGGAGGAGGTACAGGGTT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFKQSAD*RRRYRV
Trigger: AACCCTGTACCTCCTCCTTCAGTCTGCACTTTGTTT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCCTTCTTTTCCATGGTaGATAAAACCTGTAGAAGCT +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDPSFPW*IKPVEA
Trigger: AGCTTCTACAGGTTTTATTCACCATGGAAAAGAAGG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCGCACAACATCAGTTTTaGGTCCCACCACTACTGGGG +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCAQHQF*VPPLLG
Trigger: CCCCAGTAGTGGTGGGACTCAAAACTGATGTTGTGC...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCAATCATCTACATATTaGAGGAAAGTTGCCTGTGGA +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDQSSTY*RKVACG
Trigger: TCCACAGGCAACTTTCCTTCAATATGTAGATGATTG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGCTTATCTGCATATTTaGCAACTGGGCCACTGCAGC +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEAYLHI*QLGHCS
Trigger: GCTGCAGTGGCCCAGTTGTCAAATATGCAGATAAGC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAAAACTTGGAACAGGGTaGAAGGAAGGAGGACTGTCC +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEKLGTG*KEGGLS
Trigger: GGACAGTCCTCCTTCCTTTCACCCTGTTCCAAGTTT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTCGTTTTCTCGACAACTaGATGCCCACCTTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFRFLDN*MPTFQK
Trigger: TTTCTGGAAGGTGGGCATGCAGTTGTCGAGAAAACG...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTATCCCCGTGTTAATCTaGTGTATAGATCCGTGTGCC +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFIPVLI*CIDPCA
Trigger: GGCACACGGATCTATACACCAGATTAACACGGGGAT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCCTGCCAGTACTGGAGTaGCTGAAGATTTGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCLPVLE*LKIWRV
Trigger: GACCCTCCAAATCTTCAGCCACTCCAGTACTGGCAG...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTTCCCAGGTGGGCTGGTaGGAGAACATGAGTGACTCA +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCSQVGW*ENMSDS
Trigger: TGAGTCACTCATGTTCTCCCACCAGCCCACCTGGGA...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGTTGGATGTATGTCCTaGACTCTTTTATTAACCTCC +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDVGCMS*TLLLTS
Trigger: GGAGGTTAATAAAAGAGTCCAGGACATACATCCAAC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAATGCTGGCATTTTGTTTaGGTAGTTGTGGCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQECWHFV*VVVARS
Trigger: GCTCCTGGCCACAACTACCCAAACAAAATGCCAGCA...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTCACGATTGTTCAGCTTaGGTACCAGGGTGGTGGGGT +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCHDCSA*VPGWWG
Trigger: ACCCCACCACCCTGGTACCCAAGCTGAACAATCGTG...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTTCCTTCTGATGTCCTaGACAGTGTATGATGGCCAC +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFFLLMS*TVYDGH
Trigger: GTGGCCATCATACACTGTCCAGGACATCAGAAGGAA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAATTCCAGGAGGAACTaGGCTTCCAATACACCTCTC +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFNSRRN*ASNTPL
Trigger: GAGAGGTGTATTGGAAGCCCAGTTCCTCCTGGAATT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp CAGTGCTCTGGGGTCGACTTGTGTATCACGCAGGGACAGAGGAGTTaGACCACAAGCTCAAGAGGTAAGAGGTTTATAAATGCAAAAACC +
Preference number: 2 (lower is better)
Translates to: QCSGVDLCITQGQRS*TTSSRGKRFINAKT
Trigger: GGTTTTTGCATTTATAAACCTCTTACCTCTTGAGCTTGTGGTCAAACTCCTCTGTCCCTGCGTGATACACAAGTCGACCCCAGAGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTCATATCCTGGAACATTaGGTCACAGAGTTCACCTTC +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFHILEH*VTEFTF
Trigger: GAAGGTGAACTCTGTGACTCAATGTTCCAGGATATG...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTCCCAGTCAGGTTGGTTaGGAGGAAACCCTGCATCTA +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCPSQVG*EETLHL
Trigger: TAGATGCAGGGTTTCCTCTCAACCAACCTGACTGGG...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAGTTGGCTGGATGGGTaGAGCTTAGAAAGCATCTTT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFSWLDG*SLESIF
Trigger: AAAGATGCTTTCTAAGCTTCACCCATCCAGCCAACT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAGGATGTTTGCACAATaGTGTGTGGGACACGATTGT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFRMFAQ*CVGHDC
Trigger: ACAATCGTGTCCCACACATCATTGTGCAAACATCCT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCCTTCCAGCCCATGAATaGTCCTGCAAATCTCGATGG +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCLPAHE*SCKSRW
Trigger: CCATCGAGATTTGCAGGATCATTCATGGGCTGGAAG...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTGTCTTGTCCCGCCTGTaGCAGAGTCACAGCTTAAGA +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCVLSRL*QSHSLR
Trigger: TCTTAAGCTGTGACTCTGTCACAGGCGGGACAAGAC...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAATTCTCGACAACTGCATaGCCACCTTCCAGAAATCCT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEFSTTA*PPSRNP
Trigger: AGGATTTCTGGAAGGTGGGCATGCAGTTGTCGAGAA...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGGCAGAGTACCAAAATaGCCTGCTGTAAGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEGRVPK*PAVRVS
Trigger: AGAGACTCTTACAGCAGGGCATTTTGGTACTCTGCC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTTTCTCATTCACCACTaGTGTCCTGGGTTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFFLIHH*CPGFLL
Trigger: AAGCAGAAACCCAGGACAGCAGTGGTGAATGAGAAA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGTCAAGTCAGTCATTTaGCTTCCTTTGGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFVKSVI*LPLAAE
Trigger: TTCAGCAGCCAAAGGAAGGCAAATGACTGACTTGAC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATAGCCTGGTGTTTGTTTaGAGAAAATTACATCCAGAT +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDSLVFV*RKLHPD
Trigger: ATCTGGATGTAATTTTCTCCAAACAAACACCAGGCT...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAACCACCAGTGCTCCAATaGTTCCTACAAAGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEPPVLQ*FLQSPC
Trigger: ACAAGGACTTTGTAGGAACCATTGGAGCACTGGTGG...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCAAGTCCCAGTCAGGTTaGTTGAGAGGAAACCCTGCA +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIKSQSG*LRGNPA
Trigger: TGCAGGGTTTCCTCTCAACCAACCTGACTGGGACTT...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCAAGTCCCAGTCAGGTTaGTTGAGAGGAAACCCTGCA +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCKSQSG*LRGNPA
Trigger: TGCAGGGTTTCCTCTCAACCAACCTGACTGGGACTT...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAGTCATCCATCTGTCTaGCAGCTGTCTGATGATACT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFSHPSV*QLSDDT
Trigger: AGTATCATCAGACAGCTGCCAGACAGATGGATGACT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTCATTTGCCTTCCTTTaGCTGCTGAATCTCGTTCCT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFSFAFL*LLNLVP
Trigger: AGGAACGAGATTCAGCAGCCAAAGGAAGGCAAATGA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAACCGAAGTCTTTTTCCTaGAGTATATGGGGAGCATCC +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEPKSFS*SIWGAS
Trigger: GGATGCTCCCCATATACTCCAGGAAAAAGACTTCGG...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGGAGTGTTCCAAACTTaGAACAGGGTGAAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEGVFQT*NRVKGR
Trigger: CCTTCCTTTCACCCTGTTCCAAGTTTGGAACACTCC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCAAGCTGGCTACCAGTTaGCAAAAATCGGGAGTGAGC +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCKLATS*QKSGVS
Trigger: GCTCACTCCCGATTTTTGCCAACTGGTAGCCAGCTT...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCAAACAAAGTGCAGACTaGAGGAGGAGGTACAGGGTT +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCKQSAD*RRRYRV
Trigger: AACCCTGTACCTCCTCCTTCAGTCTGCACTTTGTTT...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGATCCTGTGTTTAGCTaGGCTTTGTTAGGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEDPVFS*ALLGLF
Trigger: GAACAACCCTAACAAAGCTCAGCTAAACACAGGATC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAACATATCCTGGAACATTaGGTCACAGAGTTCACCTTC +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEHILEH*VTEFTF
Trigger: GAAGGTGAACTCTGTGACTCAATGTTCCAGGATATG...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAAACCCCGGTTCTTCCTaGAAAACTATTGCCTTAGTC +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQENPGSS*KTIALV
Trigger: GACTAAGGCAATAGTTTTTCAGGAAGAACCGGGGTT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCTGTGGATTTCAGCTTTaGAGGAGGCAAGGTCTCGAT +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTICGFQL*RRQGLD
Trigger: ATCGAGACCTTGCCTCCTTCAAAGCTGAAATCCACA...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGTCCTAACTGGTCCATaGCATCAAGATCTTTTAGAG +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFVLTGP*HQDLLE
Trigger: CTCTAAAAGATCTTGATGTCATGGACCAGTTAGGAC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCTTCTCGACAACTGCATaGCCACCTTCCAGAAATCCT +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCFSTTA*PPSRNP
Trigger: AGGATTTCTGGAAGGTGGGCATGCAGTTGTCGAGAA...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGCCAGTATAATTATCTaGTGTCCCAAATTTAGCTTA +
Preference number: 2 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDASIII*CPKFSL
Trigger: TAAGCTAAATTTGGGACAGCAGATAATTATACTGGC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCTTCCAGGGCATGGGGTaGCAGTATAATTATCTGCTG +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCFQGMG*QYNYLL
Trigger: CAGCAGATAATTATACTGGCACCCCATGCCCTGGAA...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCGCTGTCCTGGGTTTCTaGTTATCCTTGACCACAAAG +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCAVLGF*LSLTTK
Trigger: CTTTGTGGTCAAGGATAAGCAGAAACCCAGGACAGC...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAATTTCTCATTCACCACTaGTGTCCTGGGTTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEFLIHH*CPGFLL
Trigger: AAGCAGAAACCCAGGACAGCAGTGGTGAATGAGAAA...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTACCTTAGCAGGCAGATaGATAGCTTTGAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCTLAGR*IALSRL
Trigger: CAGCCTGCTCAAAGCTATGCATCTGCCTGCTAAGGT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCACTGAGTCTGGTCCATaGAACCAGAGGACATCAGTT +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCTESGP*NQRTSV
Trigger: AACTGATGTCCTCTGGTTCCATGGACCAGACTCAGT...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCCAGATACAGCACTCCCTTGTGTTGTGTCCATTTGTCACCGTTTTCTCGACAAACTGAGTCTGGTCCATaGAACCAGAGGACATCAGTT +
Preference number: 2 (lower is better)
Translates to: SRYSTPLCCVHLSPFSRQTESGP*NQRTSV
Trigger: AACTGATGTCCTCTGGTTCCATGGACCAGACTCAGT...TTGTCGAGAAAACGGTGACAAATGGACACAACACAAGGGAGTGCTGTATCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTATCAGAGCATTCAACTaGATCCTGTGTTTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFIRAFN*ILCLAE
Trigger: CTCAGCTAAACACAGGATCCAGTTGAATGCTCTGAT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCCACCAGTGCTCCAATaGTTCCTACAAAGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIPPVLQ*FLQSPC
Trigger: ACAAGGACTTTGTAGGAACCATTGGAGCACTGGTGG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGGAAACTTAGCCTCCTaGAACCTTGGCATTCTAATA +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFGNLAS*NLGILI
Trigger: TATTAGAATGCCAAGGTTCCAGGAGGCTAAGTTTCC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAAAAGTAGTGGTTGGGTaGAGGAATGTCACCATCTGT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEKVVVG*RNVTIC
Trigger: ACAGATGGTGACATTCCTCCACCCAACCACTACTTT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCTGTATGGCTGTTGATTaGGATGCAACCCCGGTTCTT +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCCMAVD*DATPVL
Trigger: AAGAACCGGGGTTGCATCCCAATCAACAGCCATACA...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTGTAAGGATTGGGAATaGTTGGATGTATGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFCKDWE*LDVCPG
Trigger: TCCAGGACATACATCCAACCATTCCCAATCCTTACA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAAGGAAAGTTGCCTGTaGATTTCAGCTTTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFKESCL*ISALKE
Trigger: CTCCTTCAAAGCTGAAATCCACAGGCAACTTTCCTT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCTTCCTTCTGATGTCCTaGACAGTGTATGATGGCCAC +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIFLLMS*TVYDGH
Trigger: GTGGCCATCATACACTGTCCAGGACATCAGAAGGAA...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTTTTCCTGGAGTATATaGGGAGCATCCTGCATTAGT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFFSWSI*GASCIS
Trigger: ACTAATGCAGGATGCTCCCCATATACTCCAGGAAAA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp CATGATATCCCAACTCACCAATTCAGTCAGGAGTTTTTCAGTTCCTaGCTGGCATTTTGTTTGGGTAGTTGTGGCCAGGAGCCAATCATC +
Preference number: 2 (lower is better)
Translates to: HDIPTHQFSQEFFSS*LAFCLGSCGQEPII
Trigger: GATGATTGGCTCCTGGCCACAACTACCCAAACAAAATGCCAGCAAGGAACTGAAAAACTCCTGACTGAATTGGTGAGTTGGGATATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCGATCCTGTGTTTAGCTaGGCTTTGTTAGGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIDPVFS*ALLGLF
Trigger: GAACAACCCTAACAAAGCTCAGCTAAACACAGGATC...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCGTTTCTGCTTATCCTTaGCCACAAAGGTGCTACCAT +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCVSAYP*PQRCYH
Trigger: ATGGTAGCACCTTTGTGGTCAAGGATAAGCAGAAAC...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCGTCAAGTCAGTCATTTaGCTTCCTTTGGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIVKSVI*LPLAAE
Trigger: TTCAGCAGCCAAAGGAAGGCAAATGACTGACTTGAC...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTACTGAGTCTGGTCCATaGAACCAGAGGACATCAGTT +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCTESGP*NQRTSV
Trigger: AACTGATGTCCTCTGGTTCCATGGACCAGACTCAGT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTACAAAAGGTCTGCCATaGTCTTTTCTTGACTTCAAC +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFTKGLP*SFLDFN
Trigger: GTTGAAGTCAAGAAAAGACCATGGCAGACCTTTTGT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTTTAGCCAAATTGGTGTaGCATCAAGCAGCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCLAKLV*HQAALL
Trigger: CAGAAGGGCTGCTTGATGCCACACCAATTTGGCTAA...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCCAGCCGCTGGCCACTTaGTCAAATTATTTTGATAGG +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCQPLAT*SNYFDR
Trigger: CCTATCAAAATAATTTGACCAAGTGGCCAGCGGCTG...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCTCATTTGCCTTCCTTTaGCTGCTGAATCTCGTTCCT +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTISFAFL*LLNLVP
Trigger: AGGAACGAGATTCAGCAGCCAAAGGAAGGCAAATGA...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTAGTTTTTGGGGAGCATaGGGATTACGGTTGGTCTTG +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCSFWGA*GLRLVL
Trigger: CAAGACCAACCGTAATCCCCATGCTCCCCAAAAACT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTCTCAAGAATCTAAGCTaGCTACCAGTTGGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFLKNLS*LPVGKN
Trigger: ATTTTTGCCAACTGGTAGCCAGCTTAGATTCTTGAG...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCTTTGGTCAACCTGTCTaGGAAACACCATTTGAGACC +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCFGQPV*ETPFET
Trigger: GGTCTCAAATGGTGTTTCCCAGACAGGTTGACCAAA...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp CCAATCATCTACATATTGAAGGAAAGTTGCCTGTGGATTTCAGCTTaGAAGGAGGCAAGGTCTCGATGTAGTGCCTCATCGAAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: PIIYILKESCLWISA*KEARSRCSASSKRV
Trigger: TACTCTCTTCGATGAGGCACTACATCGAGACCTTGCCTCCTTCAAAGCTGAAATCCACAGGCAACTTTCCTTCAATATGTAGATGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGTAAATCTAAAACCTTaGTGGCCAAGAACTACCTCA +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEVNLKP*WPRTTS
Trigger: TGAGGTAGTTCTTGGCCATCAAGGTTTTAGATTTAC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTTTAGCAATCCAGAGTaGCTTATGTTTGATTGGCTT +
Preference number: 2 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFFSNPE*LMFDWL
Trigger: AAGCCAATCAAACATAAGTCACTCTGGATTGCTAAA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTGATCCTGTGTTTAGCTaGGCTTTGTTAGGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCDPVFS*ALLGLF
Trigger: GAACAACCCTAACAAAGCTCAGCTAAACACAGGATC...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAAACCACACCAAGACATaGTTTAGACACGTAAACAGA +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQENHTKT*FRHVNR
Trigger: TCTGTTTACGTGTCTAAATCATGTCTTGGTGTGGTT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCGGAAACTTAGCCTCCTaGAACCTTGGCATTCTAATA +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIGNLAS*NLGILI
Trigger: TATTAGAATGCCAAGGTTCCAGGAGGCTAAGTTTCC...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCGTGGTTAGCATATCCTaGAACATTGAGTCACAGAGT +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIVVSIS*NIESQS
Trigger: ACTCTGTGACTCAATGTTCCAGGATATGCTAACCAC...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCTTGTCCCTTCAAAGTTaGGTCAAATGGAGTATACCG +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCLSLQS*VKWSIP
Trigger: CGGTATACTCCATTTGACCCAACTTTGAAGGGACAA...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCTGCATATTTGACAACTaGGCCACTGCAGCAATATCT +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCCIFDN*ATAAIS
Trigger: AGATATTGCTGCAGTGGCCCAGTTGTCAAATATGCA...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAACGAGCCTCTTTGCTTaGAAGTATCATTTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQETSLFA*KYHFSF
Trigger: GAAGGAAAAATGATACTTCCAAGCAAAGAGGCTCGT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp CAAGGCATTCTTTTTGTACAAACATTTCCTGGAACAAAGGAGTGGTaGGGTGGAGGAATGTCACCATCTGTTTTGCGGTTAGCATATCCT +
Preference number: 2 (lower is better)
Translates to: QGILFVQTFPGTKEW*GGGMSPSVLRLAYP
Trigger: AGGATATGCTAACCGCAAAACAGATGGTGACATTCCTCCACCCAACCACTCCTTTGTTCCAGGAAATGTTTGTACAAAAAGAATGCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCGTACAACTCACTATGTaGCTTCTCCACATAATTCTG +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCVQLTM*LLHIIL
Trigger: CAGAATTATGTGGAGAAGTCACATAGTGAGTTGTAC...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGCCATGGTCTTTTCTTaGCTTCAACAGAAAGATTAT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEAMVFS*LQQKDY
Trigger: ATAATCTTTCTGTTGAAGTCAAGAAAAGACCATGGC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCCTTCTTTTCCATGGTaGATAAAACCTGTAGAAGCT +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIPSFPW*IKPVEA
Trigger: AGCTTCTACAGGTTTTATTCACCATGGAAAAGAAGG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAATTTTTATCAGAGGCATaGTATCCCAACTCACCAATT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQEFLSEA*YPNSPI
Trigger: AATTGGTGAGTTGGGATATCATGCCTCTGATAAAAA...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAATTAACATGTGAAGCATaGATCCAAGCTGAAATTCCT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQELTCEA*IQAEIP
Trigger: AGGAATTTCAGCTTGGATTCATGCTTCACATGTTAA...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTGTTACTGGTTTTCTGTaGAACCTGGTAACATGCTTG +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCVTGFL*NLVTCL
Trigger: CAAGCATGTTACCAGGTTTCACAGAAAACCAGTAAC...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATCGTTTTCTCGACAACTaGATGCCCACCTTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHRFLDN*MPTFQK
Trigger: TTTCTGGAAGGTGGGCATGCAGTTGTCGAGAAAACG...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTCTGCTGTCTATAATTTaGCCCATGGATATGGGCATT +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCLLSII*PMDMGI
Trigger: AATGCCCATATCCATGGGGCAAATTATAGACAGCAG...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTCATATTTCCTTGAGTTaGCTGTTTGGCAGTCAAGTC +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCHISLS*LFGSQV
Trigger: GACTTGACTGCCAAACAGGCAACTCAAGGAAATATG...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAAGCCTGGTGTTTGTTTaGAGAAAATTACATCCAGAT +
Preference number: 2 (lower is better)
Translates to: FPAWRGRSCASASGISQESLVFV*RKLHPD
Trigger: ATCTGGATGTAATTTTCTCCAAACAAACACCAGGCT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTATCAGAGCATTCAACTaGATCCTGTGTTTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCIRAFN*ILCLAE
Trigger: CTCAGCTAAACACAGGATCCAGTTGAATGCTCTGAT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCAAAGGGTTAGTCAAATaGAATTCCCCTGTTGCATGT +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIKGLVK*NSPVAC
Trigger: ACATGCAACAGGGGAATTCCATTTGACTAACCCTTT...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCTGTACAAACATTTCCTaGAACAAAGTAGTGGTTGGG +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTICTNIS*NKVVVG
Trigger: CCCAACCACTACTTTGTTCCAGGAAATGTTTGTACA...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTTGTAAGGATTGGGAATaGTTGGATGTATGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCCKDWE*LDVCPG
Trigger: TCCAGGACATACATCCAACCATTCCCAATCCTTACA...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTTGCATATTTGACAACTaGGCCACTGCAGCAATATCT +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCCIFDN*ATAAIS
Trigger: AGATATTGCTGCAGTGGCCCAGTTGTCAAATATGCA...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCGCAATTGGAATTGATTaGACAATATACCACACCATG +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIAIGID*TIYHTM
Trigger: CATGGTGTGGTATATTGTTCAATCAATTCCAATTGC...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCCTTGCAATTGGAATTaGTTGAACAATATACCACAC +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIPCNWN*LNNIPH
Trigger: GTGTGGTATATTGTTCAATCAATTCCAATTGCAAGG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCGCCATGGTCTTTTCTTaGCTTCAACAGAAAGATTAT +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCAMVFS*LQQKDY
Trigger: ATAATCTTTCTGTTGAAGTCAAGAAAAGACCATGGC...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCTTTTTATCAGAGGCATaGTATCCCAACTCACCAATT +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCFLSEA*YPNSPI
Trigger: AATTGGTGAGTTGGGATATCATGCCTCTGATAAAAA...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCATATTGAAGGAAAGTTaGCTGTGGATTTCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIILKES*LWISAL
Trigger: CAAAGCTGAAATCCACAGGCAACTTTCCTTCAATAT...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCGCCAAGGGTGTGTTTTaGTCATATGTTCTATCAATT +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIAKGVF*SYVLSI
Trigger: AATTGATAGAACATATGACCAAAACACACCCTTGGC...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTAAAGGGTTAGTCAAATaGAATTCCCCTGTTGCATGT +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCKGLVK*NSPVAC
Trigger: ACATGCAACAGGGGAATTCCATTTGACTAACCCTTT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCTATGTTTAGTCCAATaGTTCAGAGTCAAACTAAGG +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTILCLVQ*FRVKLR
Trigger: CCTTAGTTTGACTCTGAACCATTGGACTAAACATAG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCCTATGTTTAGTCCAATaGTTCAGAGTCAAACTAAGG +
Preference number: 2 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCLCLVQ*FRVKLR
Trigger: CCTTAGTTTGACTCTGAACCATTGGACTAAACATAG...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTACAAAAGGTCTGCCATaGTCTTTTCTTGACTTCAAC +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCTKGLP*SFLDFN
Trigger: GTTGAAGTCAAGAAAAGACCATGGCAGACCTTTTGT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCGGTCGTAATATCTACTaGCATTTTGAGAACCAGTAT +
Preference number: 2 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIGRNIY*HFENQY
Trigger: ATACTGGTTCTCAAAATGCCAGTAGATATTACGACC...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTACGAGCCTCTTTGCTTaGAAGTATCATTTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCTSLFA*KYHFSF
Trigger: GAAGGAAAAATGATACTTCCAAGCAAAGAGGCTCGT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTCAGGAAACAAGTATCTaGTATCTGATGTCTTATGGC +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCQETSI*YLMSYG
Trigger: GCCATAAGACATCAGATACCAGATACTTGTTTCCTG...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp GGTCGTAATATCTACTGGCATTTTGAGAACCAGTATCATATTTCCTaGAGTTGCCTGTTTGGCAGTCAAGTCAGTCATTTGCCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: GRNIYWHFENQYHIS*SCLFGSQVSHLPSF
Trigger: AAAGGAAGGCAAATGACTGACTTGACTGCCAAACAGGCAACTCAAGGAAATATGATACTGGTTCTCAAAATGCCAGTAGATATTACGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGTCCATGGAACCAGAGGACATCAGTTCAAAAGCTAAGTTCCAAGTTAATTTTTATAGACAGCATGCTATaGATGACAATTCCGACGGCA +
Preference number: 2 (lower is better)
Translates to: GPWNQRTSVQKLSSKLIFIDSML*MTIPTA
Trigger: TGCCGTCGGAATTGTCATTCATAGCATGCTGTCTAT...AAAAATTAACTTGGAACTTAGCTTTTGAACTGATGTCCTCTGGTTCCATGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTCCTTGCAATTGGAATTaGTTGAACAATATACCACAC +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCPCNWN*LNNIPH
Trigger: GTGTGGTATATTGTTCAATCAATTCCAATTGCAAGG...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATCTGACCAGTGTGATGTaGATGTTTTCTGTTTTTGGG +
Preference number: 2 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHLTSVM*MFSVFG
Trigger: CCCAAAAACAGAAAACATCCACATCACACTGGTCAG...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTCTATGTTTAGTCCAATaGTTCAGAGTCAAACTAAGG +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCLCLVQ*FRVKLR
Trigger: CCTTAGTTTGACTCTGAACCATTGGACTAAACATAG...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTGGTCGTAATATCTACTaGCATTTTGAGAACCAGTAT +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCGRNIY*HFENQY
Trigger: ATACTGGTTCTCAAAATGCCAGTAGATATTACGACC...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATGTACAACTCACTATGTaGCTTCTCCACATAATTCTG +
Preference number: 2 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHVQLTM*LLHIIL
Trigger: CAGAATTATGTGGAGAAGTCACATAGTGAGTTGTAC...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATATCCTGTGCTGGAATTaGCTTGCAATTGGAATTGAT +
Preference number: 2 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHILCWN*LAIGID
Trigger: ATCAATTCCAATTGCAAGGCAATTCCAGCACAGGAT...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTGCCAGTATAATTATCTaGTGTCCCAAATTTAGCTTA +
Preference number: 2 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCASIII*CPKFSL
Trigger: TAAGCTAAATTTGGGACAGCAGATAATTATACTGGC...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CCA 90 bp CAAGGAACGGTCAAGGAGTTCTTTTTGTACAAACATTTCCTGGAACAAAGTAGTAGCCTCCTGGAACCTTaGCATTCTAATAGCACATAT +
Preference number: 2 (lower is better)
Translates to: QGTVKEFFLYKHFLEQSSSLLEP*HSNSTY
Trigger: ATATGTGCTATTAGAATGCCAAGGTTCCAGGAGGCT...ACTACTTTGTTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGACCGTTCCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp GAATTATCAAAGATAGCAGTAGATACACAGGGAATTAATCCAGTATaGCAAGCCCATCACTTGTGTAACCCAGGAAACAAGTATCTGGTA +
Preference number: 2 (lower is better)
Translates to: ELSKIAVDTQGINPV*QAHHLCNPGNKYLV
Trigger: TACCAGATACTTGTTTCCTGGGTTACACAAGTGATGGGCTTGCAATACTGGATTAATTCCCTGTGTATCTACTGCTATCTTTGATAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CAAGGAACGGTCAAGGAGTTCTTTTTGTACAAACATTTCCTGGAACAAAGTAGTGTAAATCTAAAACCTTaGTGGCCAAGAACTACCTCA +
Preference number: 2 (lower is better)
Translates to: QGTVKEFFLYKHFLEQSSVNLKP*WPRTTS
Trigger: TGAGGTAGTTCTTGGCCATCAAGGTTTTAGATTTAC...ACTACTTTGTTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGACCGTTCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR GCA 90 bp CAAGGAACGGTCAAGGAGTTCTTTTTGTACAAACATTTCCTGGAACAAAGTAGTATCCTGTGCTGGAATTaGCTTGCAATTGGAATTGAT +
Preference number: 2 (lower is better)
Translates to: QGTVKEFFLYKHFLEQSSILCWN*LAIGID
Trigger: ATCAATTCCAATTGCAAGGCAATTCCAGCACAGGAT...ACTACTTTGTTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGACCGTTCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp AAAAACCTCAAATACCTGACAATAACCAACAGCAAGCTAGCAAGTTaGCATAACAGATTCAAGGAACGGTCAAGGAGTTCTTTTTGTACA +
Preference number: 2 (lower is better)
Translates to: KNLKYLTITNSKLAS*HNRFKERSRSSFCT
Trigger: TGTACAAAAAGAACTCCTTGACCGTTCCTTGAATCTGTTATGCAAACTTGCTAGCTTGCTGTTGGTTATTGTCAGGTATTTGAGGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp GGTCCATGGAACCAGAGGACATCAGTTCAAAAGCTAAGTTCCAAGTTAATTTTTGCAATTGGAATTGATTaGACAATATACCACACCATG +
Preference number: 2 (lower is better)
Translates to: GPWNQRTSVQKLSSKLIFAIGID*TIYHTM
Trigger: CATGGTGTGGTATATTGTTCAATCAATTCCAATTGC...AAAAATTAACTTGGAACTTAGCTTTTGAACTGATGTCCTCTGGTTCCATGGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR TCA 90 bp CAAGGAACGGTCAAGGAGTTCTTTTTGTACAAACATTTCCTGGAACAAAGTAGTTTTAGCAATCCAGAGTaGCTTATGTTTGATTGGCTT +
Preference number: 2 (lower is better)
Translates to: QGTVKEFFLYKHFLEQSSFSNPE*LMFDWL
Trigger: AAGCCAATCAAACATAAGTCACTCTGGATTGCTAAA...ACTACTTTGTTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGACCGTTCCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 90 bp TGTACCCTTTTTCTCCTTGCTTTAGCAATCCAGAGTGACTTATGTTaGATTGGCTTATTAAACTTCTTAGTAGAGTTTACTCAATTGCCT +
Preference number: 2 (lower is better)
Translates to: CTLFLLALAIQSDLC*IGLLNFLVEFTQLP
Trigger: AGGCAATTGAGTAAACTCTACTAAGAAGTTTAATAAGCCAATCAAACATAAGTCACTCTGGATTGCTAAAGCAAGGAGAAAAAGGGTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp CTACTGGGGGTCCGTAGATCCTCAGGGGCAGACTCATaGTCCAGTCTCACCCTTCCGGACTTTGGGCTCGAT +
Preference number: 3 (lower is better)
Translates to: LLGVRRSSGADS*SSLTLPDFGLD
Trigger: ATCGAGCCCAAAGTCCGGAAGGGTGAGACTGGACCATGAGTCTGCCCCTGAGGATCTACGGACCCCCAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp ACGGTATTCTTCTTTCAGCCCCAGGGCCAGCACCACTaGGGTGGGAGGTTCCCAGGTTACCCTAGGTCCATC +
Preference number: 3 (lower is better)
Translates to: TVFFFQPQGQHH*GGRFPGYPRSI
Trigger: GATGGACCTAGGGTAACCTGGGAACCTCCCACCTCAGTGGTGCTGGCCCTGGGGCTGAAAGAAGAATACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp CAGTTGACATCTGTGCCTGGGATCTCCGAACCCAAATaGACCTCCAGGGGAGAATCTCTTTCCTGCCTGGAG +
Preference number: 3 (lower is better)
Translates to: QLTSVPGISEPK*TSRGESLSCLE
Trigger: CTCCAGGCAGGAAAGAGATTCTCCCCTGGAGGTGCATTTGGGTTCGGAGATCCCAGGCACAGATGTCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGGCATATCCTGGAACATaGAGTCACAGAGTTCACCTT +
Preference number: 3 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWAYPGT*SHRVHL
Trigger: AAGGTGAACTCTGTGACTCAATGTTCCAGGATATGC...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATAGTCAGCAACAGGCTTaGGTAGTGAGTCATGAGGGC +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDSQQQA*VVSHEG
Trigger: GCCCTCATGACTCACTACCAAAGCCTGTTGCTGACT...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTaGGGTTTCCCTCCAAAACAGAAACCGTGCAATGGA +
Preference number: 3 (lower is better)
Translates to: SLLQTGHWPLHG*GFPPKQKPCNG
Trigger: TCCATTGCACGGTTTCTGTTTTGGAGGGAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TGGCCTGTCTCCCCGAAGTCTTTTTCCTGGAGTATATaGGGAGCATCCTGCATTAGTCAGGGCACAGGCACT +
Preference number: 3 (lower is better)
Translates to: WPVSPKSFSWSI*GASCISQGTGT
Trigger: AGTGCCTGTGCCCTGACTAATGCAGGATGCTCCCCATATACTCCAGGAAAAAGACTTCGGGGAGACAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGTCCTGGACCAGGTCTaGCCAAACAGTTATGTATGG +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDVLDQV*PNSYVW
Trigger: CCATACATAACTGTTTGGCAAGACCTGGTCCAGGAC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTTTCCCATTGATTCCTaGAGAGCCAGGCTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDFPIDS*RARLQE
Trigger: CTCCTGAAGCCTGGCTCTCAAGGAATCAATGGGAAA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp AAATGCCCTGCTGTAAGAGTCTCTGGATGTGGGGTCTaGTCCCTTCTCTTGCCTCTCAGCTCATGGGGTACT +
Preference number: 3 (lower is better)
Translates to: KCPAVRVSGCGV*SLLLPLSSWGT
Trigger: AGTACCCCATGAGCTGAGAGGCAAGAGAAGGGATCAGACCCCACATCCAGAGACTCTTACAGCAGGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp CTCGTTCAGTCAGCAACAGGCTTTGGTAGTGAGTCATaGGGGCATCAGTCATCCATCTGTCTGGCAGCTGTC +
Preference number: 3 (lower is better)
Translates to: LVQSATGFGSES*GHQSSICLAAV
Trigger: GACAGCTGCCAGACAGATGGATGACTGATGCCCTCATGACTCACTACCAAAGCCTGTTGCTGACTGAACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp TTTTCCTCCCTCTTTGGTCAGGGGGTGGAGAGGAGTTaGAAGCATAGCGAATCTCGGTATCCAGAGTCTGCA +
Preference number: 3 (lower is better)
Translates to: FSSLFGQGVERS*KHSESRYPESA
Trigger: TGCAGACTCTGGATACCGAGATTCGCTATGCTTGCAACTCCTCTCCACCCCCTGACCAAAGAGGGAGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TATGGGCACAACATCAGTTTTGAGTCCCACCACTACTaGGGGGACCATGATTGCCATTCCCATCCCTCCTGT +
Preference number: 3 (lower is better)
Translates to: YGHNISFESHHY*GDHDCHSHPSC
Trigger: ACAGGAGGGATGGGAATGGCAATCATGGTCCCCCCAGTAGTGGTGGGACTCAAAACTGATGTTGTGCCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp GTAGTGAGTCATGAGGGCATCAGTCATCCATCTGTCTaGCAGCTGTCTGATGATACTTTCCAGGGCATGGGG +
Preference number: 3 (lower is better)
Translates to: VVSHEGISHPSV*QLSDDTFQGMG
Trigger: CCCCATGCCCTGGAAAGTATCATCAGACAGCTGCCAGACAGATGGATGACTGATGCCCTCATGACTCACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGAAGCCTGGTGTTTGTTaGGAGAAAATTACATCCAGA +
Preference number: 3 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWKPGVC*EKITSR
Trigger: TCTGGATGTAATTTTCTCCAAACAAACACCAGGCTT...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGAGCAAGCTAGCAAGTTaGCATAACAGATTCAAGGAA +
Preference number: 3 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWSKLAS*HNRFKE
Trigger: TTCCTTGAATCTGTTATGCAAACTTGCTAGCTTGCT...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTCCCTGTACCGATGGTTaGACCCAGAGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFPCTDG*TQSVCV
Trigger: CACACACACACTCTGGGTCAAACCATCGGTACAGGG...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCTTCAGCTAGGATGTTaGCACAATGATGTGTGGGAC +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDLQLGC*HNDVWD
Trigger: GTCCCACACATCATTGTGCAAACATCCTAGCTGAAG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGGTTTCTGCTTATCCTaGACCACAAAGGTGCTACCA +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDGFCLS*TTKVLP
Trigger: TGGTAGCACCTTTGTGGTCAAGGATAAGCAGAAACC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATAGGAGTGTTCCAAACTaGGAACAGGGTGAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDRSVPN*EQGERK
Trigger: CTTCCTTTCACCCTGTTCCAAGTTTGGAACACTCCT...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGGCCTTGCAATTGGAATaGATTGAACAATATACCACA +
Preference number: 3 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWALQLE*IEQYTT
Trigger: TGTGGTATATTGTTCAATCAATTCCAATTGCAAGGC...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCAGCAAGCTAGCAAGTTaGCATAACAGATTCAAGGAA +
Preference number: 3 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFSKLAS*HNRFKE
Trigger: TTCCTTGAATCTGTTATGCAAACTTGCTAGCTTGCT...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAATTTTCCTCCCTCTTaGGTCAGGGGGTGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFNFPPS*VRGWRG
Trigger: TCCTCTCCACCCCCTGACCAAAGAGGGAGGAAAATT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCACACGATTGTTCAGCTaGGGTACCAGGGTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCTRLFS*GTRVVG
Trigger: CCCCACCACCCTGGTACCCAAGCTGAACAATCGTGT...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp CCCACAGGGTGGGCTAGGAGGCCCTTGACCTTAAGCTaGATCTTGAAAGTGGTTCTAAGATCTCGTTTGGTC +
Preference number: 3 (lower is better)
Translates to: PTGWARRPLTLS*ILKVVLRSRLV
Trigger: GACCAAACGAGATCTTAGAACCACTTTCAAGATTCAGCTTAAGGTCAAGGGCCTCCTAGCCCACCCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp GTTGAAGTCCCAGTCAGGTTGGTTGAGAGGAAACCCTaGATCTATCTCATTAGGCAAGTTAGTGGGCACCCC +
Preference number: 3 (lower is better)
Translates to: VEVPVRLVERKP*IYLIRQVSGHP
Trigger: GGGGTGCCCACTAACTTGCCTAATGAGATAGATGCAGGGTTTCCTCTCAACCAACCTGACTGGGACTTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp GGCGGCTCTGTTTCAGGAGCAGCCTTTACTTTCAGTTaGTTTCCCATTGATTCCTTGAGAGCCAGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: GGSVSGAAFTFS*FPIDSLRARLQ
Trigger: CTGAAGCCTGGCTCTCAAGGAATCAATGGGAAACCAACTGAAAGTAAAGGCTGCTCCTGAAACAGAGCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp AGTACCAAAATGCCCTGCTGTAAGAGTCTCTGGATGTaGGGTCTGATCCCTTCTCTTGCCTCTCAGCTCATG +
Preference number: 3 (lower is better)
Translates to: STKMPCCKSLWM*GLIPSLASQLM
Trigger: CATGAGCTGAGAGGCAAGAGAAGGGATCAGACCCCACATCCAGAGACTCTTACAGCAGGGCATTTTGGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TCTCTTACCTGGCAAGGGGTGGTTGGAGTAGGAATCTaGGTCACTGTCTGTTTTCTAGCCTCCATCAGCCAT +
Preference number: 3 (lower is better)
Translates to: SLTWQGVVGVGI*VTVCFLASISH
Trigger: ATGGCTGATGGAGGCTAGAAAACAGACAGTGACCCAGATTCCTACTCCAACCACCCCTTGCCAGGTAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp CAGGTTTTTGGGCTGAAGTTCCTTCAGGTAGGCTGCTaGCCCAAATCACCCATTTCTCATTCACCACTGCTG +
Preference number: 3 (lower is better)
Translates to: QVFGLKFLQVGC*PKSPISHSPLL
Trigger: CAGCAGTGGTGAATGAGAAATGGGTGATTTGGGCCAGCAGCCTACCTGAAGGAACTTCAGCCCAAAAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TGTGACAGGACCTGCCATGTCAGTTTTTGGGGAGCATaGGGATTACGGTTGGTCTTGTCCATCAGTCTTGTC +
Preference number: 3 (lower is better)
Translates to: CDRTCHVSFWGA*GLRLVLSISLV
Trigger: GACAAGACTGATGGACAAGACCAACCGTAATCCCCATGCTCCCCAAAAACTGACATGGCAGGTCCTGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGGTAAATCTAAAACCTaGATGGCCAAGAACTACCTC +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDGKSKT*MAKNYL
Trigger: GAGGTAGTTCTTGGCCATCAAGGTTTTAGATTTACC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCGTCAAGGAGTTCTTTTaGTACAAACATTTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFVKEFF*YKHFLE
Trigger: TTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGAC...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTTTCCCATTGATTCCTaGAGAGCCAGGCTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFFPIDS*RARLQE
Trigger: CTCCTGAAGCCTGGCTCTCAAGGAATCAATGGGAAA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCCAATCATCTACATATaGAAGGAAAGTTGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDPIIYI*KESCLW
Trigger: CCACAGGCAACTTTCCTTCAATATGTAGATGATTGG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAAGTCAGCAACAGGCTTaGGTAGTGAGTCATGAGGGC +
Preference number: 3 (lower is better)
Translates to: FPAWRGRSCASASGISQESQQQA*VVSHEG
Trigger: GCCCTCATGACTCACTACCAAAGCCTGTTGCTGACT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTACACGATTGTTCAGCTaGGGTACCAGGGTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCTRLFS*GTRVVG
Trigger: CCCCACCACCCTGGTACCCAAGCTGAACAATCGTGT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGTCATTTGCCTTCCTTaGGCTGCTGAATCTCGTTCC +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFVICLP*AAESRS
Trigger: GGAACGAGATTCAGCAGCCAAAGGAAGGCAAATGAC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp CATTCACCACTGCTGTCCTGGGTTTCTGCTTATCCTTaGCCACAAAGGTGCTACCATCGGGTGTACCAGTTA +
Preference number: 3 (lower is better)
Translates to: HSPLLSWVSAYP*PQRCYHRVYQL
Trigger: TAACTGGTACACCCGATGGTAGCACCTTTGTGGTCAAGGATAAGCAGAAACCCAGGACAGCAGTGGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp GATCTCGTTTGGTCAACCTGTCTGGGAAACACCATTTaGGACCCCATGTTCTCCCTCACAGACATGTGGAGA +
Preference number: 3 (lower is better)
Translates to: DLVWSTCLGNTI*DPMFSLTDMWR
Trigger: TCTCCACATGTCTGTGAGGGAGAACATGGGGTCTCAAATGGTGTTTCCCAGACAGGTTGACCAAACGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp GTGCCAAAGCCAGAAACCTGGGTTAGGGTGATTTTATaGTGTTGTCCCCACATGCAGGCCTCATGGGTTGTA +
Preference number: 3 (lower is better)
Translates to: VPKPETWVRVIL*CCPHMQASWVV
Trigger: TACAACCCATGAGGCCTGCATGTGGGGACAACATCATAAAATCACCCTAACCCAGGTTTCTGGCTTTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp ACCCATTTCTCATTCACCACTGCTGTCCTGGGTTTCTaGTTATCCTTGACCACAAAGGTGCTACCATCGGGT +
Preference number: 3 (lower is better)
Translates to: THFSFTTAVLGF*LSLTTKVLPSG
Trigger: ACCCGATGGTAGCACCTTTGTGGTCAAGGATAAGCAGAAACCCAGGACAGCAGTGGTGAATGAGAAATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp CAGAATCAGAGAAAAGATGCAATCCGTCATGAGGGTTaGTGGTCTCTCCTTAGTAGGAGGGTCACCGCTTCA +
Preference number: 3 (lower is better)
Translates to: QNQRKDAIRHEG*WSLLSRRVTAS
Trigger: TGAAGCGGTGACCCTCCTACTAAGGAGAGACCACCAACCCTCATGACGGATTGCATCTTTTCTCTGATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp CTGAGGGCCTGGATAAGGACTATTAATTCAGGTTTTTaGGCTGAAGTTCCTTCAGGTAGGCTGCTGGCCCAA +
Preference number: 3 (lower is better)
Translates to: LRAWIRTINSGF*AEVPSGRLLAQ
Trigger: TTGGGCCAGCAGCCTACCTGAAGGAACTTCAGCCCAAAAACCTGAATTAATAGTCCTTATCCAGGCCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp CCTGTTTGGCAGTCAAGTCAGTCATTTGCCTTCCTTTaGCTGCTGAATCTCGTTCCTTCTGATGTCCTGGAC +
Preference number: 3 (lower is better)
Translates to: PVWQSSQSFAFL*LLNLVPSDVLD
Trigger: GTCCAGGACATCAGAAGGAACGAGATTCAGCAGCCAAAGGAAGGCAAATGACTGACTTGACTGCCAAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp GCAATCAGCAAGAGGTTTATTCAGGAACTAGTGCACTaGGGACAACTTGTCTACCACACAGGGACAGAGGTG +
Preference number: 3 (lower is better)
Translates to: AISKRFIQELVH*GQLVYHTGTEV
Trigger: CACCTCTGTCCCTGTGTGGTAGACAAGTTGTCCCCAGTGCACTAGTTCCTGAATAAACCTCTTGCTGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAAGTTATGTATGGCTGTaGATTGGGATGCAACCCCGG +
Preference number: 3 (lower is better)
Translates to: FPAWRGRSCASASGISQESYVWL*IGMQPR
Trigger: CCGGGGTTGCATCCCAATCAACAGCCATACATAACT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCATATTGAAGGAAAGTaGCCTGTGGATTTCAGCTTT +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDHIEGK*PVDFSF
Trigger: AAAGCTGAAATCCACAGGCAACTTTCCTTCAATATG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCAATTTTCCTCCCTCTTaGGTCAGGGGGTGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTINFPPS*VRGWRG
Trigger: TCCTCTCCACCCCCTGACCAAAGAGGGAGGAAAATT...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGGTTTCTGCTTATCCTaGACCACAAAGGTGCTACCA +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFGFCLS*TTKVLP
Trigger: TGGTAGCACCTTTGTGGTCAAGGATAAGCAGAAACC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTGCCTTGTCATCCCAGTaGACATCTGTGCCTGGGATC +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCALSSQ*TSVPGI
Trigger: GATCCCAGGCACAGATGTCAACTGGGATGACAAGGC...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp ATTTGCCTTCCTTTGGCTGCTGAATCTCGTTCCTTCTaGTGTCCTGGACAGTGTATGATGGCCACCTTAGCA +
Preference number: 3 (lower is better)
Translates to: ICLPLAAESRSF*CPGQCMMATLA
Trigger: TGCTAAGGTGGCCATCATACACTGTCCAGGACATCAGAAGGAACGAGATTCAGCAGCCAAAGGAAGGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp AATTTCCAATTTATCCCCAGTTGGCTGGCCAATCCCTaGCTTACCTGGGCAATGAAGGCAGGCCCATTATCA +
Preference number: 3 (lower is better)
Translates to: NFQFIPSWLANP*LTWAMKAGPLS
Trigger: TGATAATGGGCCTGCCTTCATTGCCCAGGTAAGTCAGGGATTGGCCAGCCAACTGGGGATAAATTGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp TACGGTTGGTCTTGTCCATCAGTCTTGTCCCGCCTGTaGCAGAGTCACAGCTTAAGAGGATTATCAGTGGTT +
Preference number: 3 (lower is better)
Translates to: YGWSCPSVLSRL*QSHSLRGLSVV
Trigger: AACCACTGATAATCCTCTTAAGCTGTGACTCTGTCACAGGCGGGACAAGACTGATGGACAAGACCAACCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp CAATGCAAGTGCCAAAGCCAGAAACCTGGGTTAGGGTaGTTTTATGATGTTGTCCCCACATGCAGGCCTCAT +
Preference number: 3 (lower is better)
Translates to: QCKCQSQKPGLG*FYDVVPTCRPH
Trigger: ATGAGGCCTGCATGTGGGGACAACATCATAAAATCACCCTAACCCAGGTTTCTGGCTTTGGCACTTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp CCTGGACAGTGTATGATGGCCACCTTAGCAGGCAGATaGATAGCTTTGAGCAGGCTGAGGATTTCTTCTTTA +
Preference number: 3 (lower is better)
Translates to: PGQCMMATLAGR*IALSRLRISSL
Trigger: TAAAGAAGAAATCCTCAGCCTGCTCAAAGCTATGCATCTGCCTGCTAAGGTGGCCATCATACACTGTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp GGGGAGAATCTCTTTCCTGCCTGGAGAGGTAGATCCTaGGCATCAGCATCAGGAATATCTCAAGAATCTAAG +
Preference number: 3 (lower is better)
Translates to: GENLFPAWRGRS*ASASGISQESK
Trigger: CTTAGATTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAAGAGATTCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGCATATCCTGGAACATaGAGTCACAGAGTTCACCTT +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFAYPGT*SHRVHL
Trigger: AAGGTGAACTCTGTGACTCAATGTTCCAGGATATGC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATAACCAACACCAAAATTaGGCTATTTTGAGGCACAAA +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDNQHQN*AILRHK
Trigger: TTTGTGCCTCAAAATAGCCAAATTTTGGTGTTGGTT...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCCTGTGGATTTCAGCTTaGAAGGAGGCAAGGTCTCGA +
Preference number: 3 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCLWISA*KEARSR
Trigger: TCGAGACCTTGCCTCCTTCAAAGCTGAAATCCACAG...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCTTGCTGGCATTTTGTTaGGGTAGTTGTGGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCLLAFC*GSCGQE
Trigger: CTCCTGGCCACAACTACCCAAACAAAATGCCAGCAA...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATCTTGATGTTCAACTGTaGAATAGAATTTTCCTCCCT +
Preference number: 3 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDLDVQL*NRIFLP
Trigger: AGGGAGGAAAATTCTATTCAACAGTTGAACATCAAG...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTAGTCAGCAACAGGCTTaGGTAGTGAGTCATGAGGGC +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCSQQQA*VVSHEG
Trigger: GCCCTCATGACTCACTACCAAAGCCTGTTGCTGACT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCGGCAGATGCATAGCTTaGAGCAGGCTGAGGATTTCT +
Preference number: 3 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIGRCIA*SRLRIS
Trigger: AGAAATCCTCAGCCTGCTCAAAGCTATGCATCTGCC...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGTAGAGTTTACTCAATaGCCTAATGCTTCCACAAGC +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFVEFTQ*PNASTS
Trigger: GCTTGTGGAAGCATTAGGCAATTGAGTAAACTCTAC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTAGTTATGTATGGCTGTaGATTGGGATGCAACCCCGG +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCSYVWL*IGMQPR
Trigger: CCGGGGTTGCATCCCAATCAACAGCCATACATAACT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTCTGTGGATTTCAGCTTaGAAGGAGGCAAGGTCTCGA +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCLWISA*KEARSR
Trigger: TCGAGACCTTGCCTCCTTCAAAGCTGAAATCCACAG...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTTTGCTGGCATTTTGTTaGGGTAGTTGTGGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCLLAFC*GSCGQE
Trigger: CTCCTGGCCACAACTACCCAAACAAAATGCCAGCAA...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCCTGCTGTCTATAATTaGCCCCATGGATATGGGCAT +
Preference number: 3 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIPAVYN*PHGYGH
Trigger: ATGCCCATATCCATGGGGCAAATTATAGACAGCAGG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTGTCATTTGCCTTCCTTaGGCTGCTGAATCTCGTTCC +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCVICLP*AAESRS
Trigger: GGAACGAGATTCAGCAGCCAAAGGAAGGCAAATGAC...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTTGGGGCTGGAGCACTTaGTTCAGCCAACACCTTATT +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCWGWST*FSQHLI
Trigger: AATAAGGTGTTGGCTGAACAAAGTGCTCCAGCCCCA...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp AATCCTAATTTCCAAGGATTGAAGGGGGAGTGCAACTaGGTCTGGTCCATGGAACCAGAGGACATCAGTTCA +
Preference number: 3 (lower is better)
Translates to: NPNFQGLKGECN*VWSMEPEDISS
Trigger: TGAACTGATGTCCTCTGGTTCCATGGACCAGACTCAGTTGCACTCCCCCTTCAATCCTTGGAAATTAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp TGTCTACATTCCACAGTTGCTGAAATCAACCAGTCATaGGACAAGCAAGCTGAAGCTGAAAGACCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: CLHSTVAEINQS*DKQAEAERPLQ
Trigger: CTGCAGGGGTCTTTCAGCTTCAGCTTGCTTGTCTCATGACTGGTTGATTTCAGCAACTGTGGAATGTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp GGCCAGGAGCCAATCATCTACATATTGAAGGAAAGTTaGCTGTGGATTTCAGCTTTGAAGGAGGCAAGGTCT +
Preference number: 3 (lower is better)
Translates to: GQEPIIYILKES*LWISALKEARS
Trigger: AGACCTTGCCTCCTTCAAAGCTGAAATCCACAGGCAACTTTCCTTCAATATGTAGATGATTGGCTCCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TATATAAAACAGCCAATGATACTGCCAGTACTGGAGTaGCTGAAGATTTGGAGGGTCTACTGGGGGTCCGTA +
Preference number: 3 (lower is better)
Translates to: YIKQPMILPVLE*LKIWRVYWGSV
Trigger: TACGGACCCCCAGTAGACCCTCCAAATCTTCAGCCACTCCAGTACTGGCAGTATCATTGGCTGTTTTATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp GAAAGTGGTTCTAAGATCTCGTTTGGTCAACCTGTCTaGGAAACACCATTTGAGACCCCATGTTCTCCCTCA +
Preference number: 3 (lower is better)
Translates to: ESGSKISFGQPV*ETPFETPCSPS
Trigger: TGAGGGAGAACATGGGGTCTCAAATGGTGTTTCCCAGACAGGTTGACCAAACGAGATCTTAGAACCACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAAGCCTGGTGTTTGTTaGGAGAAAATTACATCCAGA +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFKPGVC*EKITSR
Trigger: TCTGGATGTAATTTTCTCCAAACAAACACCAGGCTT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTAGCAATAGACTAGCATaGTATCAGAGCATTCAACTG +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFSNRLA*YQSIQL
Trigger: CAGTTGAATGCTCTGATACAATGCTAGTCTATTGCT...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCGCATATCCTGGAACATaGAGTCACAGAGTTCACCTT +
Preference number: 3 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCAYPGT*SHRVHL
Trigger: AAGGTGAACTCTGTGACTCAATGTTCCAGGATATGC...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAACAAAATTTGGCTATTTaGAGGCACAAAAGGTCTGCC +
Preference number: 3 (lower is better)
Translates to: FPAWRGRSCASASGISQEQNLAI*RHKRSA
Trigger: GGCAGACCTTTTGTGCCTCAAAATAGCCAAATTTTG...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTAAGGATTGGGAATGGTaGGATGTATGTCCTGGACTC +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCKDWEW*DVCPGL
Trigger: GAGTCCAGGACATACATCCAACCATTCCCAATCCTT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAACAGTATCATATTTCCTaGAGTTGCCTGTTTGGCAGT +
Preference number: 3 (lower is better)
Translates to: FPAWRGRSCASASGISQEQYHIS*SCLFGS
Trigger: ACTGCCAAACAGGCAACTCAAGGAAATATGATACTG...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp TTCTTTTCCATGGTGAATAAAACCTGTAGAAGCTGTTaGCAATCATCCCAGGTGGGCTGGTGGGAGAACATG +
Preference number: 3 (lower is better)
Translates to: FFSMVNKTCRSC*QSSQVGWWENM
Trigger: CATGTTCTCCCACCAGCCCACCTGGGATGATTGTCAACAGCTTCTACAGGTTTTATTCACCATGGAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp GAGCAGGTCCCACACTTCTTTTCTCACCACCTTGAGTaGTTTAAGACAGACAAACAGGGGTTTATAGAGAAC +
Preference number: 3 (lower is better)
Translates to: EQVPHFFSHHLE*FKTDKQGFIEN
Trigger: GTTCTCTATAAACCCCTGTTTGTCTGTCTTAAAGCACTCAAGGTGGTGAGAAAAGAAGTGTGGGACCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp CCAGGTCTTGCCAAACAGTTATGTATGGCTGTTGATTaGGATGCAACCCCGGTTCTTCCTGAAAAACTATTG +
Preference number: 3 (lower is better)
Translates to: PGLAKQLCMAVD*DATPVLPEKLL
Trigger: CAATAGTTTTTCAGGAAGAACCGGGGTTGCATCCCAATCAACAGCCATACATAACTGTTTGGCAAGACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TCAGGAATATCTCAAGAATCTAAGCTGGCTACCAGTTaGCAAAAATCGGGAGTGAGCATAGGCCACCACATA +
Preference number: 3 (lower is better)
Translates to: SGISQESKLATS*QKSGVSIGHHI
Trigger: TATGTGGTGGCCTATGCTCACTCCCGATTTTTGCCAACTGGTAGCCAGCTTAGATTCTTGAGATATTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp GAACGGTCAAGGCATTCTTTTTGTACAAACATTTCCTaGAACAAAGGAGTGGTTGGGTGGAGGAATGTCACC +
Preference number: 3 (lower is better)
Translates to: ERSRHSFCTNIS*NKGVVGWRNVT
Trigger: GGTGACATTCCTCCACCCAACCACTCCTTTGTTCCAGGAAATGTTTGTACAAAAAGAATGCCTTGACCGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGCCTTGCAATTGGAATaGATTGAACAATATACCACA +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFALQLE*IEQYTT
Trigger: TGTGGTATATTGTTCAATCAATTCCAATTGCAAGGC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAAAGCCTGGTGTTTGTTaGGAGAAAATTACATCCAGA +
Preference number: 3 (lower is better)
Translates to: FPAWRGRSCASASGISQEKPGVC*EKITSR
Trigger: TCTGGATGTAATTTTCTCCAAACAAACACCAGGCTT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGTCAAGGAGTTCTTTTaGTACAAACATTTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFVKEFF*YKHFLE
Trigger: TTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGAC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAAGCAAGCTAGCAAGTTaGCATAACAGATTCAAGGAA +
Preference number: 3 (lower is better)
Translates to: FPAWRGRSCASASGISQESKLAS*HNRFKE
Trigger: TTCCTTGAATCTGTTATGCAAACTTGCTAGCTTGCT...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCATTTTAACGGGCTTCTaGGAGAATCCTCTCCTTCTT +
Preference number: 3 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCILTGF*ENPLLL
Trigger: AAGAAGGAGAGGATTCTCCAAGAAGCCCGTTAAAAT...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCTTGGTCAAATTATTTaGATAGGTAGGCAACTGGCC +
Preference number: 3 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTILGQII*IGRQLA
Trigger: GGCCAGTTGCCTACCTATCAAAATAATTTGACCAAG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCACGAGCCTCTTTGCTaGGAAGTATCATTTTTCCTT +
Preference number: 3 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIHEPLC*EVSFFL
Trigger: AAGGAAAAATGATACTTCCAAGCAAAGAGGCTCGTG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp TGGTATCTGATGTCTTATGGCTCTTTAGGGTTTCATTaGAGAGATGTTGATGATTTTGGGGCCGGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: WYLMSYGSLGFH*RDVDDFGAGFQ
Trigger: TTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGAGCCATAAGACATCAGATACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp AGGAATGTCACCATCTGTTTTGTGGTTAGCATATCCTaGAACATTGAGTCACAGAGTTCACCTTCTCAGGCT +
Preference number: 3 (lower is better)
Translates to: RNVTICFVVSIS*NIESQSSPSQA
Trigger: AGCCTGAGAAGGTGAACTCTGTGACTCAATGTTCCAGGATATGCTAACCACAAAACAGATGGTGACATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp GAACGGTCAAGGAGTTCTTTTTGTACAAACATTTCCTaGAACAAAGTAGTGGTTGGGTGGAGGAATGTCACC +
Preference number: 3 (lower is better)
Translates to: ERSRSSFCTNIS*NKVVVGWRNVT
Trigger: GGTGACATTCCTCCACCCAACCACTACTTTGTTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGACCGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp GTCAGGAGTTTTTCAGTTCCTTGCTGGCATTTTGTTTaGGTAGTTGTGGCCAGGAGCCAATCATCTACATAT +
Preference number: 3 (lower is better)
Translates to: VRSFSVPCWHFV*VVVARSQSSTY
Trigger: ATATGTAGATGATTGGCTCCTGGCCACAACTACCCAAACAAAATGCCAGCAAGGAACTGAAAAACTCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TGTACAAACATTTCCTGGAACAAAGGAGTGGTTGGGTaGAGGAATGTCACCATCTGTTTTGCGGTTAGCATA +
Preference number: 3 (lower is better)
Translates to: CTNISWNKGVVG*RNVTICFAVSI
Trigger: TATGCTAACCGCAAAACAGATGGTGACATTCCTCCACCCAACCACTCCTTTGTTCCAGGAAATGTTTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCTGTGCTGGAATTGCCTaGCAATTGGAATTGATTGAA +
Preference number: 3 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTICAGIA*QLELIE
Trigger: TTCAATCAATTCCAATTGCAAGGCAATTCCAGCACA...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCAGCAATAGACTAGCATaGTATCAGAGCATTCAACTG +
Preference number: 3 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCSNRLA*YQSIQL
Trigger: CAGTTGAATGCTCTGATACAATGCTAGTCTATTGCT...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCATATTGAAGGAAAGTaGCCTGTGGATTTCAGCTTT +
Preference number: 3 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIHIEGK*PVDFSF
Trigger: AAAGCTGAAATCCACAGGCAACTTTCCTTCAATATG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp TATCTCGATGCCCAAGATCTCACAAGAGACGGATCTTaGTGCAATCAGCAAGAGGTTTATTCAGGAACTAGT +
Preference number: 3 (lower is better)
Translates to: YLDAQDLTRDGS*CNQQEVYSGTS
Trigger: ACTAGTTCCTGAATAAACCTCTTGCTGATTGCATCAAGATCCGTCTCTTGTGAGATCTTGGGCATCGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp ATTCTTTTTGTACAAACATTTCCTGGAACAAAGGAGTaGTTGGGTGGAGGAATGTCACCATCTGTTTTGCGG +
Preference number: 3 (lower is better)
Translates to: ILFVQTFPGTKE*LGGGMSPSVLR
Trigger: CCGCAAAACAGATGGTGACATTCCTCCACCCAACCACTCCTTTGTTCCAGGAAATGTTTGTACAAAAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTTGTGCTGGAATTGCCTaGCAATTGGAATTGATTGAA +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCCAGIA*QLELIE
Trigger: TTCAATCAATTCCAATTGCAAGGCAATTCCAGCACA...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCCTTGATGTTCAACTGTaGAATAGAATTTTCCTCCCT +
Preference number: 3 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCLDVQL*NRIFLP
Trigger: AGGGAGGAAAATTCTATTCAACAGTTGAACATCAAG...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp ATCCTGTGCTGGAATTGCCTTGCAATTGGAATTGATTaGACAATATACCACACCATGCCAAGGGTGTGTTTT +
Preference number: 3 (lower is better)
Translates to: ILCWNCLAIGID*TIYHTMPRVCF
Trigger: AAAACACACCCTTGGCATGGTGTGGTATATTGTTCAATCAATTCCAATTGCAAGGCAATTCCAGCACAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp CTCCACTTAAAAGCAAAAACTAGTTGGCTGGATGGGTaGAGCTTAGAAAGCATCTTTAAGGTCCAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: LHLKAKTSWLDG*SLESIFKVQSS
Trigger: ACTGCTTTGGACCTTAAAGATGCTTTCTAAGCTTCACCCATCCAGCCAACTAGTTTTTGCTTTTAAGTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp CAGTCCCGAAATAGTTGTGCCTTTTTATCAGAGGCATaGTATCCCAACTCACCAATTCAGTCAGGAGTTTTT +
Preference number: 3 (lower is better)
Translates to: QSRNSCAFLSEA*YPNSPIQSGVF
Trigger: AAAAACTCCTGACTGAATTGGTGAGTTGGGATATCATGCCTCTGATAAAAAGGCACAACTATTTCGGGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp TCTACTGGCATTTTGAGAACCAGTATCATATTTCCTTaGGTTGCCTGTTTGGCAGTCAAGTCAGTCATTTGC +
Preference number: 3 (lower is better)
Translates to: STGILRTSIIFP*VACLAVKSVIC
Trigger: GCAAATGACTGACTTGACTGCCAAACAGGCAACTCAAGGAAATATGATACTGGTTCTCAAAATGCCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp CCTGAGGCAAAGAGTTTTCATGGAAACTTAGCCTCCTaGAACCTTGGCATTCTAATAGCACATATACTCATA +
Preference number: 3 (lower is better)
Translates to: PEAKSFHGNLAS*NLGILIAHILI
Trigger: TATGAGTATATGTGCTATTAGAATGCCAAGGTTCCAGGAGGCTAAGTTTCCATGAAAACTCTTTGCCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TGTACAAACATTTCCTGGAACAAAGTAGTGGTTGGGTaGAGGAATGTCACCATCTGTTTTGTGGTTAGCATA +
Preference number: 3 (lower is better)
Translates to: CTNISWNKVVVG*RNVTICFVVSI
Trigger: TATGCTAACCACAAAACAGATGGTGACATTCCTCCACCCAACCACTACTTTGTTCCAGGAAATGTTTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp AAGCCCATCACTTGTGTAACCCAGGAAACAAGTATCTaGTATCTGATGTCTTATGGCTCTTTAGGGTTTCAT +
Preference number: 3 (lower is better)
Translates to: KPITCVTQETSI*YLMSYGSLGFH
Trigger: ATGAAACCCTAAAGAGCCATAAGACATCAGATACCAGATACTTGTTTCCTGGGTTACACAAGTGATGGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATGTAGAGTTTACTCAATaGCCTAATGCTTCCACAAGC +
Preference number: 3 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHVEFTQ*PNASTS
Trigger: GCTTGTGGAAGCATTAGGCAATTGAGTAAACTCTAC...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTAACCAACACCAAAATTaGGCTATTTTGAGGCACAAA +
Preference number: 3 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCNQHQN*AILRHK
Trigger: TTTGTGCCTCAAAATAGCCAAATTTTGGTGTTGGTT...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGTCCATGGAACCAGAGGACATCAGTTCAAAAGCTAAGTTCCAAGTTAATTTTTGGTAAATCTAAAACCTaGATGGCCAAGAACTACCTC +
Preference number: 3 (lower is better)
Translates to: GPWNQRTSVQKLSSKLIFGKSKT*MAKNYL
Trigger: GAGGTAGTTCTTGGCCATCAAGGTTTTAGATTTACC...AAAAATTAACTTGGAACTTAGCTTTTGAACTGATGTCCTCTGGTTCCATGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp CTGGTGTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGGCCTTGCAATTGGAATaGATTGAACAATATACCACA +
Preference number: 3 (lower is better)
Translates to: LVFVWRKLHPDTALPCVVALQLE*IEQYTT
Trigger: TGTGGTATATTGTTCAATCAATTCCAATTGCAAGGC...CACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAACACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR-3UTR CAA 90 bp GGTCCATGGAACCAGAGGACATCAGTTCAAAAGCTAAGTTCCAAGTTAATTTTTGTAGAGTTTACTCAATaGCCTAATGCTTCCACAAGC +
Preference number: 3 (lower is better)
Translates to: GPWNQRTSVQKLSSKLIFVEFTQ*PNASTS
Trigger: GCTTGTGGAAGCATTAGGCAATTGAGTAAACTCTAC...AAAAATTAACTTGGAACTTAGCTTTTGAACTGATGTCCTCTGGTTCCATGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp TTGTTTCTGTTGGTTCTCTTGTTATTCTCTACTATGTaGGCCAGGCTAAGTAACACAGAGTTTCTGGGAATT +
Preference number: 3 (lower is better)
Translates to: LFLLVLLLFSTM*ARLSNTEFLGI
Trigger: AATTCCCAGAAACTCTGTGTTACTTAGCCTGGCCCACATAGTAGAGAATAACAAGAGAACCAACAGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp AGCTTTGTTAGGGTTGTTCCTATTCTCAGTTGTAAATaGGGCCTGGCTCCCGTCATTTTTATATGTATATAT +
Preference number: 3 (lower is better)
Translates to: SFVRVVPILSCK*GLAPVIFICIY
Trigger: ATATATACATATAAAAATGACGGGAGCCAGGCCGCATTTACAACTGAGAATAGGAACAACCCTAACAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp CCAAACACAGGAATACACAATGGGCTACTAAATAGCTaGGTTGTAGTATTATTCATGAAAGGGTTAGTCAAA +
Preference number: 3 (lower is better)
Translates to: PNTGIHNGLLNS*VVVLFMKGLVK
Trigger: TTTGACTAACCCTTTCATGAATAATACTACAACCCAGCTATTTAGTAGCCCATTGTGTATTCCTGTGTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp AAAGAGTTTTCATGGAAACTTAGCCTCCTGGAACCTTaGCATTCTAATAGCACATATACTCATAATCTATCC +
Preference number: 3 (lower is better)
Translates to: KEFSWKLSLLEP*HSNSTYTHNLS
Trigger: GGATAGATTATGAGTATATGTGCTATTAGAATGCCAAGGTTCCAGGAGGCTAAGTTTCCATGAAAACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CCA 72 bp AGGATTCTATTCATTCTCTCTACCTATCCTGAACTCTaGGGCCAATATGCACAATGTAATTTCCAATTTATC +
Preference number: 3 (lower is better)
Translates to: RILFILSTYPEL*GQYAQCNFQFI
Trigger: GATAAATTGGAAATTACATTGTGCATATTGGCCCCAGAGTTCAGGATAGGTAGAGAGAATGAATAGAATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR GCA 72 bp TTGCAATTGGAATTGATTGAACAATATACCACACCATaGCAAGGGTGTGTTTTGGTCATATGTTCTATCAAT +
Preference number: 3 (lower is better)
Translates to: LQLELIEQYTTP*QGCVLVICSIN
Trigger: ATTGATAGAACATATGACCAAAACACACCCTTGGCATGGTGTGGTATATTGTTCAATCAATTCCAATTGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp AGAGACAGTGAAAATAATCAGGCATTACAATTTACTTaGATAGAGCTAGAAAGCTCAGGGCTAGTTTACATA +
Preference number: 3 (lower is better)
Translates to: RDSENNQALQFT*IELESSGLVYI
Trigger: TATGTAAACTAGCCCTGAGCTTTCTAGCTCTATTCAAGTAAATTGTAATGCCTGATTATTTTCACTGTCTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR TCA 72 bp CATAAGGAGTATGTTGATTCAGTCCTAACTGGTCCATaGCATCAAGATCTTTTAGAGAATAATGGAAACTAT +
Preference number: 3 (lower is better)
Translates to: HKEYVDSVLTGP*HQDLLENNGNY
Trigger: ATAGTTTCCATTATTCTCTAAAAGATCTTGATGTCATGGACCAGTTAGGACTGAATCAACATACTCCTTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp GGGCAGACTCATGGTCCAGTCTCACCCTTCCGGACTTaGGGCTCGATGGCTCCGAGTTCCAGCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GQTHGPVSPFRT*GSMAPSSSSRS
Trigger: GGACCTGCTGCTGGAACTCGGAGCCATCGAGCCCAAAGTCCGGAAGGGTGAGACTGGACCATGAGTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGGGACACTCAACATGCTaGTGGTGCAAAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWGHSTC*WCKGRD
Trigger: GTCTCTCCCTTTGCACCACCAGCATGTTGAGTGTCC...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp GGTCTCTCCTTAGTAGGAGGGTCACCGCTTCACTCGTaGCTCCAGACAGGACATTGGCCCCTCCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: GLSLVGGSPLHS*LQTGHWPLHGW
Trigger: CCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCTACTAAGGAGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGGGAAGCTGTTTCCTGTaGTGCCAATGCCAATTTCAG +
Preference number: 4 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWGSCFL*CQCQFQ
Trigger: CTGAAATTGGCATTGGCATCACAGGAAACAGCTTCC...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp CCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTTGGGGTTTCAGGGGTGGCAATGATTaGTACCAAGAGTTGACTGCT +
Preference number: 4 (lower is better)
Translates to: PLHSLLQTGHWPLHGWGFRGGND*YQELTA
Trigger: AGCAGTCAACTCTTGGTATCAATCATTGCCACCCCT...GAAACCCCAACCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTCAACATGCTGGTGGTaGAAAGGGAGAGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDSTCWW*KGRDPS
Trigger: TGAGGGGTCTCTCCCTTTGCACCACCAGCATGTTGA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGGAGGACACTCAACATaGTGGTGGTGCAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDGGHST*WWCKGR
Trigger: TCTCCCTTTGCACCACCAGCATGTTGAGTGTCCTCC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCCAATGGGCAGGTCAGTaGGTCTGGGCCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIQWAGQ*VWACAH
Trigger: GTGGGCACAGGCCCAGACTCACTGACCTGCCCATTG...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATGTCTGTGGCTATGAATaGTGCGACCAGAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDVCGYE*CDQKHQ
Trigger: CTGATGCTTCTGGTCGCAGCATTCATAGCCACAGAC...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp GTTTGCACAATGATGTGTGGGACACGATTGTTCAGCTaGGGTACCAGGGTGGTGGGGTTAAGAACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VCTMMCGTRLFS*GTRVVGLRTAG
Trigger: CCCTGCTGTTCTTAACCCCACCACCCTGGTACCCAAGCTGAACAATCGTGTCCCACACATCATTGTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp CCCCATGTTCTCCCTCACAGACATGTGGAGAGGGCCTaGGTTCTCCCTCGGGTAGTGATAGTGATATTTAGG +
Preference number: 4 (lower is better)
Translates to: PHVLPHRHVERA*VLPRVVIVIFR
Trigger: CCTAAATATCACTATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp TGTTCTCCCTCACAGACATGTGGAGAGGGCCTTGGTTCTCCCTCGGGTAGTGATTGGGTCTGTTTCCTGTaGATGCATAAAAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: CSPSQTCGEGLGSPSGSDWVCFL*MHKRAT
Trigger: AGTGGCCCTTTTATGCATGCACAGGAAACAGACCCA...ATCACTACCCGAGGGAGAACCAAGGCCCTCTCCACATGTCTGTGAGGGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGGAGGACACTCAACATaGTGGTGGTGCAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFGGHST*WWCKGR
Trigger: TCTCCCTTTGCACCACCAGCATGTTGAGTGTCCTCC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTGGACACTCAACATGCTaGTGGTGCAAAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFGHSTC*WCKGRD
Trigger: GTCTCTCCCTTTGCACCACCAGCATGTTGAGTGTCC...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AGGATGGCCAGCCGCTGGCCACTTGGTCAAATTATTTaGATAGGTAGGCAACTGGCCTCTTACAGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: RMASRWPLGQII*IGRQLASYRAL
Trigger: TAGAGCCCTGTAAGAGGCCAGTTGCCTACCTATCAAAATAATTTGACCAAGTGGCCAGCGGCTGGCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATCAATGGGCAGGTCAGTaGGTCTGGGCCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHQWAGQ*VWACAH
Trigger: GTGGGCACAGGCCCAGACTCACTGACCTGCCCATTG...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCCACTCAACATGCTGGTaGTGCAAAGGGAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCHSTCW*CKGRDP
Trigger: GGGGTCTCTCCCTTTGCACCACCAGCATGTTGAGTG...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp CTCCCTTCATTCAGGGGTGTTGAAGTCCCAGTCAGGTaGGTTGAGAGGAAACCCTGCATCTATCTCATTAGG +
Preference number: 4 (lower is better)
Translates to: LPSFRGVEVPVR*VERKPCIYLIR
Trigger: CCTAATGAGATAGATGCAGGGTTTCCTCTCAACCAACCTGACTGGGACTTCAACACCCCTGAATGAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp TCATTCACCACTGCTGTCCTGGGTTTCTGCTTATCCTaGACCACAAAGGTGCTACCATCGGGTGTACCAGTT +
Preference number: 4 (lower is better)
Translates to: SFTTAVLGFCLS*TTKVLPSGVPV
Trigger: AACTGGTACACCCGATGGTAGCACCTTTGTGGTCAAGGATAAGCAGAAACCCAGGACAGCAGTGGTGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AGGGGTAAGTTTATAGCACCCAGGAGTGTTCCAAACTaGGAACAGGGTGAAAGGAAGGAGGACTGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: RGKFIAPRSVPN*EQGERKEDCPV
Trigger: GACTGGACAGTCCTCCTTCCTTTCACCCTGTTCCAAGTTTGGAACACTCCTGGGTGCTATAAACTTACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AGATCTCGTTTGGTCAACCTGTCTGGGAAACACCATTaGAGACCCCATGTTCTCCCTCACAGACATGTGGAG +
Preference number: 4 (lower is better)
Translates to: RSRLVNLSGKHH*RPHVLPHRHVE
Trigger: CTCCACATGTCTGTGAGGGAGAACATGGGGTCTCAAATGGTGTTTCCCAGACAGGTTGACCAAACGAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGTCTGTGGCTATGAATaGTGCGACCAGAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: FPAWRGRSCASASGISQEVCGYE*CDQKHQ
Trigger: CTGATGCTTCTGGTCGCAGCATTCATAGCCACAGAC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCTCAACATGCTGGTGGTaGAAAGGGAGAGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTISTCWW*KGRDPS
Trigger: TGAGGGGTCTCTCCCTTTGCACCACCAGCATGTTGA...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCGGAGGACACTCAACATaGTGGTGGTGCAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTIGGHST*WWCKGR
Trigger: TCTCCCTTTGCACCACCAGCATGTTGAGTGTCCTCC...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp GGGATACAAGTTGGGGTTGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTTGGGTCTGTTTCCTGTaGATGCATAAAAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GIQVGVVPQIPGLFPEHFWVCFL*MHKRAT
Trigger: AGTGGCCCTTTTATGCATGCACAGGAAACAGACCCA...AAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACAACCCCAACTTGTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp CTGGACCAGGTCTTGCCAAACAGTTATGTATGGCTGTaGATTGGGATGCAACCCCGGTTCTTCCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LDQVLPNSYVWL*IGMQPRFFLKN
Trigger: GTTTTTCAGGAAGAACCGGGGTTGCATCCCAATCAACAGCCATACATAACTGTTTGGCAAGACCTGGTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGGAAGCTGTTTCCTGTaGTGCCAATGCCAATTTCAG +
Preference number: 4 (lower is better)
Translates to: FPAWRGRSCASASGISQEGSCFL*CQCQFQ
Trigger: CTGAAATTGGCATTGGCATCACAGGAAACAGCTTCC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAAGAAAGTCTGGTTTCCTaGAGATGCTGGGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FPAWRGRSCASASGISQEESLVS*RCWVCF
Trigger: GAAACAGACCCAGCATCTTCAGGAAACCAGACTTTC...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CCA 90 bp CTGGTGTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGCACTCAACATGCTGGTaGTGCAAAGGGAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: LVFVWRKLHPDTALPCVVHSTCW*CKGRDP
Trigger: GGGGTCTCTCCCTTTGCACCACCAGCATGTTGAGTG...CACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAACACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAACTAAGAATGATGGCCTaGAGGACACTCAACATGCTG +
Preference number: 4 (lower is better)
Translates to: FPAWRGRSCASASGISQELRMMA*RTLNML
Trigger: CAGCATGTTGAGTGTCCTCCAGGCCATCATTCTTAG...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCGAAAGTCTGGTTTCCTaGAGATGCTGGGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCESLVS*RCWVCF
Trigger: GAAACAGACCCAGCATCTTCAGGAAACCAGACTTTC...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTGTCTGTGGCTATGAATaGTGCGACCAGAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCVCGYE*CDQKHQ
Trigger: CTGATGCTTCTGGTCGCAGCATTCATAGCCACAGAC...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp GGGGTCGACTTGTGTATCACGCAGGGACAGAGGAGTTaGACCACAAGCTCAAGAGGTAAGAGGTTTATAAAT +
Preference number: 4 (lower is better)
Translates to: GVDLCITQGQRS*TTSSRGKRFIN
Trigger: ATTTATAAACCTCTTACCTCTTGAGCTTGTGGTCAAACTCCTCTGTCCCTGCGTGATACACAAGTCGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp TGGCCAGGAGCCAATCATCTACATATTGAAGGAAAGTaGCCTGTGGATTTCAGCTTTGAAGGAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: WPGANHLHIEGK*PVDFSFEGGKV
Trigger: GACCTTGCCTCCTTCAAAGCTGAAATCCACAGGCAACTTTCCTTCAATATGTAGATGATTGGCTCCTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp CCAACTCACCAATTCAGTCAGGAGTTTTTCAGTTCCTaGCTGGCATTTTGTTTGGGTAGTTGTGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PTHQFSQEFFSS*LAFCLGSCGQE
Trigger: CTCCTGGCCACAACTACCCAAACAAAATGCCAGCAAGGAACTGAAAAACTCCTGACTGAATTGGTGAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AAGGAGTGGTTGGGTGGAGGAATGTCACCATCTGTTTaGCGGTTAGCATATCCTGGAACATTGGGTCACAAA +
Preference number: 4 (lower is better)
Translates to: KEWLGGGMSPSV*RLAYPGTLGHK
Trigger: TTTGTGACCCAATGTTCCAGGATATGCTAACCGCAAAACAGATGGTGACATTCCTCCACCCAACCACTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp AACACAACTTCAGACAATGAGGCGACCAACTCCTCTAGCTCTGACAAAGATTGTGGAAGCTGTTTCCTGTaGTGCCAATGCCAATTTCAG +
Preference number: 4 (lower is better)
Translates to: NTTSDNEATNSSSSDKDCGSCFL*CQCQFQ
Trigger: CTGAAATTGGCATTGGCATCACAGGAAACAGCTTCC...ACAATCTTTGTCAGAGCTAGAGGAGTTGGTCGCCTCATTGTCTGAAGTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAATCTGTTTCCTGTGCATaGATAAAAGGGCCACTATGT +
Preference number: 4 (lower is better)
Translates to: FPAWRGRSCASASGISQESVSCA*IKGPLC
Trigger: ACATAGTGGCCCTTTTATGCATGCACAGGAAACAGA...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AGGACCCCTGGTGGTGGATTTAGCAATAGACTAGCATaGTATCAGAGCATTCAACTGGATCCTGTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: RTPGGGFSNRLA*YQSIQLDPVFS
Trigger: GCTAAACACAGGATCCAGTTGAATGCTCTGATACAATGCTAGTCTATTGCTAAATCCACCACCAGGGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp TCACCATCTGTTTTGTGGTTAGCATATCCTGGAACATaGAGTCACAGAGTTCACCTTCTCAGGCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPSVLWLAYPGT*SHRVHLLRLGS
Trigger: AGACCCTAGCCTGAGAAGGTGAACTCTGTGACTCAATGTTCCAGGATATGCTAACCACAAAACAGATGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp TACATATTGAAGGAAAGTTGCCTGTGGATTTCAGCTTaGAAGGAGGCAAGGTCTCGATGTAGTGCCTCATCG +
Preference number: 4 (lower is better)
Translates to: YILKESCLWISA*KEARSRCSASS
Trigger: CGATGAGGCACTACATCGAGACCTTGCCTCCTTCAAAGCTGAAATCCACAGGCAACTTTCCTTCAATATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CCA 90 bp CAAGGAACGGTCAAGGAGTTCTTTTTGTACAAACATTTCCTGGAACAAAGTAGTGGACACTCAACATGCTaGTGGTGCAAAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QGTVKEFFLYKHFLEQSSGHSTC*WCKGRD
Trigger: GTCTCTCCCTTTGCACCACCAGCATGTTGAGTGTCC...ACTACTTTGTTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGACCGTTCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp GGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTaGTGTCCATTTGTCACCGTTTTCTCGACAACTGCA +
Preference number: 4 (lower is better)
Translates to: GENYIQIQHSLV*CPFVTVFSTTA
Trigger: TGCAGTTGTCGAGAAAACGGTGACAAATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp TTGGGTAGTTGTGGCCAGGAGCCAATCATCTACATATaGAAGGAAAGTTGCCTGTGGATTTCAGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LGSCGQEPIIYI*KESCLWISALK
Trigger: CTTCAAAGCTGAAATCCACAGGCAACTTTCCTTCAATATGTAGATGATTGGCTCCTGGCCACAACTACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AATCTCGATGGGTGTCAACTTCTTCAGCTAGGATGTTaGCACAATGATGTGTGGGACACGATTGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NLDGCQLLQLGC*HNDVWDTIVQL
Trigger: AAGCTGAACAATCGTGTCCCACACATCATTGTGCAAACATCCTAGCTGAAGAAGTTGACACCCATCGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATAGGGGTGGCAATGATTaGTACCAAGAGTTGACTGCT +
Preference number: 4 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHRGGND*YQELTA
Trigger: AGCAGTCAACTCTTGGTATCAATCATTGCCACCCCT...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCCACTATGTACCAAGTTaGGAGGAACATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCHYVPS*EEHETN
Trigger: ATTAGTCTCATGTTCCTCTCAACTTGGTACATAGTG...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATGAAAGTCTGGTTTCCTaGAGATGCTGGGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHESLVS*RCWVCF
Trigger: GAAACAGACCCAGCATCTTCAGGAAACCAGACTTTC...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATTGGGTCTGTTTCCTGTaGATGCATAAAAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHWVCFL*MHKRAT
Trigger: AGTGGCCCTTTTATGCATGCACAGGAAACAGACCCA...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AAAGCATCCTGTGCTGGAATTGCCTTGCAATTGGAATaGATTGAACAATATACCACACCATGCCAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KASCAGIALQLE*IEQYTTPCQGC
Trigger: ACACCCTTGGCATGGTGTGGTATATTGTTCAATCAATTCCAATTGCAAGGCAATTCCAGCACAGGATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp GGGGTTCCATACAAAGCATCCTGTGCTGGAATTGCCTaGCAATTGGAATTGATTGAACAATATACCACACCA +
Preference number: 4 (lower is better)
Translates to: GVPYKASCAGIA*QLELIEQYTTP
Trigger: TGGTGTGGTATATTGTTCAATCAATTCCAATTGCAAGGCAATTCCAGCACAGGATGCTTTGTATGGAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp TTCCTGCAGAAGTTAGTAATGCCTGCTGTCTATAATTaGCCCCATGGATATGGGCATTGGCAAAAACATACC +
Preference number: 4 (lower is better)
Translates to: FLQKLVMPAVYN*PHGYGHWQKHT
Trigger: GGTATGTTTTTGCCAATGCCCATATCCATGGGGCAAATTATAGACAGCAGGCATTACTAACTTCTGCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp TCTTTAGGGTTTCATTGCAGAGATGTTGATGATTTTGGGGCCGGGTTCCAATGCGAAGAGATATATGCTTaGACTTTGATAAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLGFHCRDVDDFGAGFQCEEIYA*TLINRS
Trigger: GCTCCTGTTTATCAAAGTTCAAGCATATATCTCTTC...GCATTGGAACCCGGCCCCAAAATCATCAACATCTCTGCAATGAAACCCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR GCA 90 bp CTGGTGTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCTGTTTCCTGTGCATaGATAAAAGGGCCACTATGT +
Preference number: 4 (lower is better)
Translates to: LVFVWRKLHPDTALPCVVSVSCA*IKGPLC
Trigger: ACATAGTGGCCCTTTTATGCATGCACAGGAAACAGA...CACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAACACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CCA 90 bp CAAGGAACGGTCAAGGAGTTCTTTTTGTACAAACATTTCCTGGAACAAAGTAGTCTAAGAATGATGGCCTaGAGGACACTCAACATGCTG +
Preference number: 4 (lower is better)
Translates to: QGTVKEFFLYKHFLEQSSLRMMA*RTLNML
Trigger: CAGCATGTTGAGTGTCCTCCAGGCCATCATTCTTAG...ACTACTTTGTTCCAGGAAATGTTTGTACAAAAAGAACTCCTTGACCGTTCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp CCATACAAAGCATCCTGTGCTGGAATTGCCTTGCAATaGGAATTGATTGAACAATATACCACACCATGCCAA +
Preference number: 4 (lower is better)
Translates to: PYKASCAGIALQ*ELIEQYTTPCQ
Trigger: TTGGCATGGTGTGGTATATTGTTCAATCAATTCCAATTGCAAGGCAATTCCAGCACAGGATGCTTTGTATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp TGTGCCACAGATTCCAGGATTGTTCCCAGAGCACTTTaGGGGAAAGGTGTAATTTTTGTAAACTATGATCCA +
Preference number: 4 (lower is better)
Translates to: CATDSRIVPRAL*GKGVIFVNYDP
Trigger: TGGATCATAGTTTACAAAAATTACACCTTTCCCCAAAAGTGCTCTGGGAACAATCCTGGAATCTGTGGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AAGATAGCAGTAGATACACAGGGAATTAATCCAGTATaGCAAGCCCATCACTTGTGTAACCCAGGAAACAAG +
Preference number: 4 (lower is better)
Translates to: KIAVDTQGINPV*QAHHLCNPGNK
Trigger: CTTGTTTCCTGGGTTACACAAGTGATGGGCTTGCAATACTGGATTAATTCCCTGTGTATCTACTGCTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp CTGGTGTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGCACTATGTACCAAGTTaGGAGGAACATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: LVFVWRKLHPDTALPCVVHYVPS*EEHETN
Trigger: ATTAGTCTCATGTTCCTCTCAACTTGGTACATAGTG...CACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAACACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR TCA 90 bp GTTTGTTTGGAGAAAATTACATCCAGATACAGCACTCCCTTGTGTTGTGTCCATCACTATGTACCAAGTTaGGAGGAACATGAGACTAAT +
Preference number: 4 (lower is better)
Translates to: VCLEKITSRYSTPLCCVHHYVPS*EEHETN
Trigger: ATTAGTCTCATGTTCCTCTCAACTTGGTACATAGTG...ATGGACACAACACAAGGGAGTGCTGTATCTGGATGTAATTTTCTCCAAACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AAATACCTGACAATAACCAACAGCAAGCTAGCAAGTTaGCATAACAGATTCAAGGAACGGTCAAGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KYLTITNSKLAS*HNRFKERSRSS
Trigger: AGAACTCCTTGACCGTTCCTTGAATCTGTTATGCAAACTTGCTAGCTTGCTGTTGGTTATTGTCAGGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp AGTGAACCTAATCTGAGCTTACAATTTTGTAAGAAGTaGTCCCTTCAAAGTTGGGTCAAATGGAGTATACCG +
Preference number: 4 (lower is better)
Translates to: SEPNLSLQFCKK*SLQSWVKWSIP
Trigger: CGGTATACTCCATTTGACCCAACTTTGAAGGGACAACTTCTTACAAAATTGTAAGCTCAGATTAGGTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp ATTATCTGCTGTCCCAAATTTAGCTTATCTGCATATTaGACAACTGGGCCACTGCAGCAATATCTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: IICCPKFSLSAY*TTGPLQQYLLS
Trigger: GCTTAAAAGATATTGCTGCAGTGGCCCAGTTGTCAAATATGCAGATAAGCTAAATTTGGGACAGCAGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
3UTR CAA 72 bp ATTGGCTTATTAAACTTCTTAGTAGAGTTTACTCAATaGCCTAATGCTTCCACAAGCTTCAGATTTTACCAG +
Preference number: 4 (lower is better)
Translates to: IGLLNFLVEFTQ*PNASTSFRFYQ
Trigger: CTGGTAAAATCTGAAGCTTGTGGAAGCATTAGGCAATTGAGTAAACTCTACTAAGAAGTTTAATAAGCCAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS CCA 90 bp AAAATGTCTGTGGCTATGAATGCTGCGACCAGAAGCATCAGTAGGTaGATTAGGGACAAGAGACCAATGGGCAGGTCAGTGAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: KMSVAMNAATRSISR*IRDKRPMGRSVSLG
Trigger: GCCCAGACTCACTGACCTGCCCATTGGTCTCTTGTCCCTAATCCACCTACTGATGCTTCTGGTCGCAGCATTCATAGCCACAGACATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000089418.5
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CAA 90 bp AGGAGGGTCACCGCTTCACTCGTTGCTCCAGACAGGACATTGGCCCCTCCATGGTGCTGTTCTTATTCATaGTATGTGAGAACAGTGAAC +
Preference number: 5 (lower is better)
Translates to: RRVTASLVAPDRTLAPPWCCSYS*YVRTVN
Trigger: GTTCACTGTTCTCACATACAATGAATAAGAACAGCA...CCATGGAGGGGCCAATGTCCTGTCTGGAGCAACGAGTGAAGCGGTGACCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CAA 90 bp TTTCCTGCCTGGAGAGGTAGATCCTGCGCATCAGCATCAGGAATATCTCAAGAATGCTGTTCTTATTCATaGTATGTGAGAACAGTGAAC +
Preference number: 5 (lower is better)
Translates to: FPAWRGRSCASASGISQECCSYS*YVRTVN
Trigger: GTTCACTGTTCTCACATACAATGAATAAGAACAGCA...TTCTTGAGATATTCCTGATGCTGATGCGCAGGATCTACCTCTCCAGGCAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS-3UTR CAA 90 bp CAGGGCACAGGCACTGCATTCTTTAGTAAACTTCACTTGCCAAGTCAGACAATCTGCTGTTCTTATTCATaGTATGTGAGAACAGTGAAC +
Preference number: 5 (lower is better)
Translates to: QGTGTAFFSKLHLPSQTICCSYS*YVRTVN
Trigger: GTTCACTGTTCTCACATACAATGAATAAGAACAGCA...GATTGTCTGACTTGGCAAGTGAAGTTTACTAAAGAATGCAGTGCCTGTGCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS CCA 72 bp GTGGCTATGAATGCTGCGACCAGAAGCATCAGTAGGTaGATTAGGGACAAGAGACCAATGGGCAGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: VAMNAATRSISR*IRDKRPMGRSV
Trigger: CACTGACCTGCCCATTGGTCTCTTGTCCCTAATCCACCTACTGATGCTTCTGGTCGCAGCATTCATAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000089418.5
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2
CDS GCA 72 bp TGGTTTCCTGAAGATGCTGGGTCTGTTTCCTGTGCATaGATAAAAGGGCCACTATGTACCAAGTTGAGAGGA +
Preference number: 6 (lower is better)
Translates to: WFPEDAGSVSCA*IKGPLCTKLRG
Trigger: TCCTCTCAACTTGGTACATAGTGGCCCTTTTATGCATGCACAGGAAACAGACCCAGCATCTTCAGGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000089418.5
ENSMUST00000226741.2
ENSMUST00000226983.2
ENSMUST00000228709.2