Pregenerated sensors for VMN1R40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096051Ensembl transcript IDs: ENSMUST00000075158.2, ENSMUST00000226925.2, ENSMUST00000227669.2, ENSMUST00000228485.2, ENSMUST00000228642.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACACAGAGCAAAGGACAGGAATGAGACAGCATGCCCCAAGCTCCTaGAGGGAAGGGAAGTTGTGGGTTTCGACCAGCAGAGGAACTGGA | + |
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Preference number: 1 (lower is better) Translates to: NTEQRTGMRQHAPSS*REGKLWVSTSRGTG Trigger: TCCAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGGCATGCTGTCTCATTCCTGTCCTTTGCTCTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR GCA 90 bp | AACATGAAAGCCAAACACAGAGCAAAGGACAGGAATGAGACAGCATaGCCCAAGCTCCTGCAGGGAAGGGAAGTTGTGGGTTTCGACCAG | + |
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Preference number: 1 (lower is better) Translates to: NMKAKHRAKDRNETA*PKLLQGREVVGFDQ Trigger: CTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGGCATGCTGTCTCATTCCTGTCCTTTGCTCTGTGTTTGGCTTTCATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR CCA 90 bp | GACACAATTGATTGTTTCTCCCAAGCTGGGGAATTTATCAGTTCCTaGTGCCTCGGGGTCCAGGGAGGATATCACATCCACAGTGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: DTIDCFSQAGEFISS*CLGVQGGYHIHSGS Trigger: GGACCCACTGTGGATGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTTGGGAGAAACAATCAATTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR TCA 90 bp | CCTGAACATCTCCTGATTCTGCACTTGGGTGCAGGGCACTTACGCTaGTGGATGTGGCAGAGCAGTATGCTTTTCCTGTGGAGATCTGAA | + |
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Preference number: 1 (lower is better) Translates to: PEHLLILHLGAGHLR*WMWQSSMLFLWRSE Trigger: TTCAGATCTCCACAGGAAAAGCATACTGCTCTGCCACATCCATCAGCGTAAGTGCCCTGCACCCAAGTGCAGAATCAGGAGATGTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR CCA 90 bp | GGAATGAGACAGCATGCCCCAAGCTCCTGCAGGGAAGGGAAGTTGTaGGTTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: GMRQHAPSSCREGKL*VSTSRGTGRDIYFS Trigger: ACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGGCATGCTGTCTCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR GCA 90 bp | ACAATTGATTGTTTCTCCCAAGCTGGGGAATTTATCAGTTCCTGGTaGCTCGGGGTCCAGGGAGGATATCACATCCACAGTGGGTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: TIDCFSQAGEFISSW*LGVQGGYHIHSGSN Trigger: ATTGGACCCACTGTGGATGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTTGGGAGAAACAATCAATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR TCA 90 bp | CAGTGGGTCCAATGGTTCGTTGCCTGCTTCCTCATGGTTCTTTGCTaGCATTTCTTAACTTATAACGAATGGGCAAGAACCAACAACACC | + |
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Preference number: 1 (lower is better) Translates to: QWVQWFVACFLMVLC*HFLTYNEWARTNNT Trigger: GGTGTTGTTGGTTCTTGCCCATTCGTTATAAGTTAAGAAATGTCAGCAAAGAACCATGAGGAAGCAGGCAACGAACCATTGGACCCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR TCA 90 bp | CAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGACACAATTaGTTGTTTCTCCCAAGCTGGGGAATTTATCAGTTCCTGGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: QRNWKGYLFQLTGHN*LFLPSWGIYQFLVP Trigger: AGGCACCAGGAACTGATAAATTCCCCAGCTTGGGAGAAACAATCAATTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR GCA 90 bp | TACAGGAAGAACACAAACATGGCATCCTTGCTGGAGAATTTTGTCTaGCTCTTGATTTTACTGTATTTCGTCCTAGATAACAGCACACTG | + |
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Preference number: 1 (lower is better) Translates to: YRKNTNMASLLENFV*LLILLYFVLDNSTL Trigger: CAGTGTGCTGTTATCTAGGACGAAATACAGTAAAATCAAGAGGCAGACAAAATTCTCCAGCAAGGATGCCATGTTTGTGTTCTTCCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGCTGGGGAATTTATCAGTTCCTGGTGCCTCGGGGTCCAGGGAGGATATCCCTCCTCCCACAGCCTaGCTGGGACCTGAACATCTC | + |
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Preference number: 2 (lower is better) Translates to: PKLGNLSVPGASGSREDIPPPTA*LGPEHL Trigger: GAGATGTTCAGGTCCCAGGCAGGCTGTGGGAGGAGG...GATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGGGGAATTTATCAGTTCCTGGTGCCTCGGGGTCCAGGGAGGATATCACACCTCCTCCCACAGCCTaGCTGGGACCTGAACATCTC | + |
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Preference number: 2 (lower is better) Translates to: KLGNLSVPGASGSREDITPPPTA*LGPEHL Trigger: GAGATGTTCAGGTCCCAGGCAGGCTGTGGGAGGAGG...TGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTGCAGGGAAGGGAAGTTGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGCTCCTCTGCAGATGCTaGAAACCTTTTGCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: APAGKGSCGFRPAEELEGLLCRC*KPFAAP Trigger: AGGGGCTGCAAAAGGTTTCCAGCATCTGCAGAGGAG...CCCTTCCAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAAGCTCCTGCAGGGAAGGGAAGTTGTGGGTTTCGACCAGCAGAGGAACTGGAATTTATCAGTTCCTaGTGCCTCGGGGTCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PQAPAGKGSCGFRPAEELEFISS*CLGVQG Trigger: TCCCTGGACCCCGAGGCACCAGGAACTGATAAATTC...CAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGGGGAATTTATCAGTTCCTGGTGCCTCGGGGTCCAGGGAGGATATCACAAGCCTGCCTGGGACCTaGACATCTCCTGATTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: KLGNLSVPGASGSREDITSLPGT*TSPDSA Trigger: TGCAGAATCAGGAGATGTTCAGGTCCCAGGCAGGCT...TGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTCCCACAGCCTGCCTGGGACCTGAACATCTCCTGATTCTGCACTTGGGTTGTGGCAGAGCAGTATaGTTTTCCTGTGGAGATCTG | + |
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Preference number: 2 (lower is better) Translates to: PPPTACLGPEHLLILHLGCGRAV*FSCGDL Trigger: CAGATCTCCACAGGAAAAGCATACTGCTCTGCCACA...ACCCAAGTGCAGAATCAGGAGATGTTCAGGTCCCAGGCAGGCTGTGGGAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGGGGAATTTATCAGTTCCTGGTGCCTCGGGGTCCAGGGAGGATATCACAGACCTGAACATCTCCTaGTTCTGCACTTGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KLGNLSVPGASGSREDITDLNIS*FCTWVQ Trigger: CTGCACCCAAGTGCAGAATCAGGAGATGTTCAGGTC...TGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCAAACACAGAGCAAAGGACAGGAATGAGACAGCATGCCCCAAGCTCCTGTTTATCAGTTCCTGGTaGCTCGGGGTCCAGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: KAKHRAKDRNETACPKLLFISSW*LGVQGG Trigger: TCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAA...CAGGAGCTTGGGGCATGCTGTCTCATTCCTGTCCTTTGCTCTGTGTTTGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCAAACACAGAGCAAAGGACAGGAATGAGACAGCATGCCCCAAGCTCCTGCCACAGTGGGTCCAATaGTTCGTTGCCTGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KAKHRAKDRNETACPKLLPQWVQ*FVACFL Trigger: GAGGAAGCAGGCAACGAACCATTGGACCCACTGTGG...CAGGAGCTTGGGGCATGCTGTCTCATTCCTGTCCTTTGCTCTGTGTTTGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAAGCTCCTGCAGGGAAGGGAAGTTGTGGGTTTCGACCAGCAGAGGAACTGTTGCCTGCTTCCTCATaGTTCTTTGCTGACATTTCT | + |
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Preference number: 2 (lower is better) Translates to: PQAPAGKGSCGFRPAEELLPASS*FFADIS Trigger: AGAAATGTCAGCAAAGAACCATGAGGAAGCAGGCAA...CAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCAAACACAGAGCAAAGGACAGGAATGAGACAGCATGCCCCAAGCTCCTGGAATTTATCAGTTCCTaGTGCCTCGGGGTCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KAKHRAKDRNETACPKLLEFISS*CLGVQG Trigger: TCCCTGGACCCCGAGGCACCAGGAACTGATAAATTC...CAGGAGCTTGGGGCATGCTGTCTCATTCCTGTCCTTTGCTCTGTGTTTGGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTGCAGGGAAGGGAAGTTGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGTTGTTTCTCCCAAGCTaGGGAATTTATCAGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: APAGKGSCGFRPAEELEGLFLPS*GIYQFL Trigger: CAGGAACTGATAAATTCCCCAGCTTGGGAGAAACAA...CCCTTCCAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGTGGGTCCAATGGTTCGTTGCCTGCTTCCTCATGGTTCTTTGCTGACATTTGTCTCCTCTGCAGATaGTGGAAACCTTTTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: HSGSNGSLPASSWFFADICLLCR*WKPFAA Trigger: GGCTGCAAAAGGTTTCCAGCATCTGCAGAGGAGACA...AATGTCAGCAAAGAACCATGAGGAAGCAGGCAACGAACCATTGGACCCACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCAAACACAGAGCAAAGGACAGGAATGAGACAGCATGCCCCAAGCTCCTGTTTCCTGTGGAGATCTaGACACACTTCTGTTACTGG | + |
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Preference number: 2 (lower is better) Translates to: KAKHRAKDRNETACPKLLFPVEI*THFCYW Trigger: CCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAA...CAGGAGCTTGGGGCATGCTGTCTCATTCCTGTCCTTTGCTCTGTGTTTGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGAGCCTGCCTGGGACCTaGACATCTCCTGATTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: CGFRPAEELEGIFISVNRSLPGT*TSPDSA Trigger: TGCAGAATCAGGAGATGTTCAGGTCCCAGGCAGGCT...CCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCAAGCTCCTGCAGGGAAGGGAAGTTGTGGGTTTCGACCAGCAGAGGAACTGCTGGAGAATTTTGTCTaGCTCTTGATTTTACTGTAT | + |
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Preference number: 2 (lower is better) Translates to: PQAPAGKGSCGFRPAEELLENFV*LLILLY Trigger: ATACAGTAAAATCAAGAGGCAGACAAAATTCTCCAG...CAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGGGGAATTTATCAGTTCCTGGTGCCTCGGGGTCCAGGGAGGATATCACATTGCCTGCTTCCTCATaGTTCTTTGCTGACATTTCT | + |
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Preference number: 2 (lower is better) Translates to: KLGNLSVPGASGSREDITLPASS*FFADIS Trigger: AGAAATGTCAGCAAAGAACCATGAGGAAGCAGGCAA...TGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGCTGGGGAATTTATCAGTTCCTGGTGCCTCGGGGTCCAGGGAGGATATCCTGGAGAATTTTGTCTaGCTCTTGATTTTACTGTAT | + |
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Preference number: 2 (lower is better) Translates to: PKLGNLSVPGASGSREDILENFV*LLILLY Trigger: ATACAGTAAAATCAAGAGGCAGACAAAATTCTCCAG...GATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCACATGGCATCCTTGCTaGAGAATTTTGTCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: QSSMLFLWRSEHTSVTGATWHPC*RILSAS Trigger: AGAGGCAGACAAAATTCTCCAGCAAGGATGCCATGT...GGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGACACAACCACAGTGGGTCCAATaGTTCGTTGCCTGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: FRPAEELEGIFISVNRTQPQWVQ*FVACFL Trigger: GAGGAAGCAGGCAACGAACCATTGGACCCACTGTGG...TTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGTAGATACTTTGTAGCAGTGGGAACATACCATCTAAAATATGAGAGTGGGGACCTGAACATCTCCTaGTTCTGCACTTGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: TGRYFVAVGTYHLKYESGDLNIS*FCTWVQ Trigger: CTGCACCCAAGTGCAGAATCAGGAGATGTTCAGGTC...CCCACTCTCATATTTTAGATGGTATGTTCCCACTGCTACAAAGTATCTACCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGGGGAATTTATCAGTTCCTGGTGCCTCGGGGTCCAGGGAGGATATCACACTGGAGAATTTTGTCTaGCTCTTGATTTTACTGTAT | + |
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Preference number: 2 (lower is better) Translates to: KLGNLSVPGASGSREDITLENFV*LLILLY Trigger: ATACAGTAAAATCAAGAGGCAGACAAAATTCTCCAG...TGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGTGTGGCAGAGCAGTATaGTTTTCCTGTGGAGATCTG | + |
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Preference number: 2 (lower is better) Translates to: CGFRPAEELEGIFISVNRCGRAV*FSCGDL Trigger: CAGATCTCCACAGGAAAAGCATACTGCTCTGCCACA...CCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCTACATGGCATCCTTGCTaGAGAATTTTGTCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RAVCFSCGDLNTLLLLVPTWHPC*RILSAS Trigger: AGAGGCAGACAAAATTCTCCAGCAAGGATGCCATGT...AGGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCGGAAGAACACAAACATaGCATCCTTGCTGGAGAATT | + |
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Preference number: 2 (lower is better) Translates to: QSSMLFLWRSEHTSVTGAGRTQT*HPCWRI Trigger: AATTCTCCAGCAAGGATGCCATGTTTGTGTTCTTCC...GGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTAGATACTTTGTAGCAGTGGGAACATACCATCTAAAATATGAGAGTGGGCTCCTCTGCAGATGCTaGAAACCTTTTGCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: TGRYFVAVGTYHLKYESGLLCRC*KPFAAP Trigger: AGGGGCTGCAAAAGGTTTCCAGCATCTGCAGAGGAG...CCCACTCTCATATTTTAGATGGTATGTTCCCACTGCTACAAAGTATCTACCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGCAAACATGGCATCCTTaGTGGAGAATTTTGTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: CGFRPAEELEGIFISVNRQTWHP*WRILSA Trigger: GGCAGACAAAATTCTCCAGCAAGGATGCCATGTTTG...CCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGACACAATGTCTCCTCTGCAGATaGTGGAAACCTTTTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: FRPAEELEGIFISVNRTQCLLCR*WKPFAA Trigger: GGCTGCAAAAGGTTTCCAGCATCTGCAGAGGAGACA...TTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGGTAGATACTTTGTAGCAGTGGGAACATACCATCTAAAATATGAGAGTGGGTGTCTCCTCTGCAGATaGTGGAAACCTTTTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TGRYFVAVGTYHLKYESGCLLCR*WKPFAA Trigger: GGCTGCAAAAGGTTTCCAGCATCTGCAGAGGAGACA...CCCACTCTCATATTTTAGATGGTATGTTCCCACTGCTACAAAGTATCTACCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCTGGAAGAACACAAACATaGCATCCTTGCTGGAGAATT | + |
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Preference number: 2 (lower is better) Translates to: RAVCFSCGDLNTLLLLVPGRTQT*HPCWRI Trigger: AATTCTCCAGCAAGGATGCCATGTTTGTGTTCTTCC...AGGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
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| 3UTR CAA 90 bp | GCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGACACAATaGATTGTTTCTCCCAAGCTGGGGAATTTATCAGTTCCTGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: AEELEGIFISVNRTQ*IVSPKLGNLSVPGA Trigger: GGCACCAGGAACTGATAAATTCCCCAGCTTGGGAGAAACAATCAATTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGTGGGTCCAATGGTTCGTTGCCTGCTTCCTCATGGTTCTTTGCTGACATTCTGGAGAATTTTGTCTaGCTCTTGATTTTACTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: HSGSNGSLPASSWFFADILENFV*LLILLY Trigger: ATACAGTAAAATCAAGAGGCAGACAAAATTCTCCAG...AATGTCAGCAAAGAACCATGAGGAAGCAGGCAACGAACCATTGGACCCACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGACACAAGGAAGAACACAAACATaGCATCCTTGCTGGAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: FRPAEELEGIFISVNRTQGRTQT*HPCWRI Trigger: AATTCTCCAGCAAGGATGCCATGTTTGTGTTCTTCC...TTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGACACAATTGCCTGCTTCCTCATaGTTCTTTGCTGACATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: FRPAEELEGIFISVNRTQLPASS*FFADIS Trigger: AGAAATGTCAGCAAAGAACCATGAGGAAGCAGGCAA...TTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGACACAATTGTTTCTCCCAAGCTaGGGAATTTATCAGTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FRPAEELEGIFISVNRTQLFLPS*GIYQFL Trigger: CAGGAACTGATAAATTCCCCAGCTTGGGAGAAACAA...TTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR CAA 90 bp | CTGTATATAATAACGGTCTACAGGAAGAACACAAACATGGCATCCTaGCTGGAGAATTTTGTCTGCCTCTTGATTTTACTGTATTTCGTC | + |
|
Preference number: 2 (lower is better) Translates to: LYIITVYRKNTNMAS*LENFVCLLILLYFV Trigger: GACGAAATACAGTAAAATCAAGAGGCAGACAAAATTCTCCAGCAAGGATGCCATGTTTGTGTTCTTCCTGTAGACCGTTATTATATACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR TCA 72 bp | CTCCTCCCACAGCCTGCCTGGGACCTGAACATCTCCTaGTTCTGCACTTGGGTGCAGGGCACTTACGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLPQPAWDLNIS*FCTWVQGTYAD Trigger: ATCAGCGTAAGTGCCCTGCACCCAAGTGCAGAATCAGGAGATGTTCAGGTCCCAGGCAGGCTGTGGGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR TCA 72 bp | CCCCTAAAATCCTCCTCCCACAGCCTGCCTGGGACCTaGACATCTCCTGATTCTGCACTTGGGTGCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PLKSSSHSLPGT*TSPDSALGCRA Trigger: TGCCCTGCACCCAAGTGCAGAATCAGGAGATGTTCAGGTCCCAGGCAGGCTGTGGGAGGAGGATTTTAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR GCA 72 bp | CAAAGGACAGGAATGAGACAGCATGCCCCAAGCTCCTaGAGGGAAGGGAAGTTGTGGGTTTCGACCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QRTGMRQHAPSS*REGKLWVSTSR Trigger: TCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGGCATGCTGTCTCATTCCTGTCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR GCA 72 bp | GCCAAACACAGAGCAAAGGACAGGAATGAGACAGCATaGCCCAAGCTCCTGCAGGGAAGGGAAGTTGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: AKHRAKDRNETA*PKLLQGREVVG Trigger: ACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGGCATGCTGTCTCATTCCTGTCCTTTGCTCTGTGTTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR CCA 72 bp | CAGCATGCCCCAAGCTCCTGCAGGGAAGGGAAGTTGTaGGTTTCGACCAGCAGAGGAACTGGAAGGGATATT | + |
|
Preference number: 3 (lower is better) Translates to: QHAPSSCREGKL*VSTSRGTGRDI Trigger: AATATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGGCATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGCTGGGGAATTTATCAGTTCCTGGTGCCTCGGGGTCCAGGGAGGATATCGATGCTGGAAACCTTTaGCAGCCCCTAAAATCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PKLGNLSVPGASGSREDIDAGNL*QPLKSS Trigger: GGAGGATTTTAGGGGCTGCAAAAGGTTTCCAGCATC...GATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR GCA 72 bp | TGTTTCTCCCAAGCTGGGGAATTTATCAGTTCCTGGTaGCTCGGGGTCCAGGGAGGATATCACATCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: CFSQAGEFISSW*LGVQGGYHIHS Trigger: ACTGTGGATGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTTGGGAGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR CCA 72 bp | GATTGTTTCTCCCAAGCTGGGGAATTTATCAGTTCCTaGTGCCTCGGGGTCCAGGGAGGATATCACATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DCFSQAGEFISS*CLGVQGGYHIH Trigger: GTGGATGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTTGGGAGAAACAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTGCAGGGAAGGGAAGTTGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGACCTCTGAGGGTGAATaGGGAGACAAAGAACTAATT | + |
|
Preference number: 3 (lower is better) Translates to: APAGKGSCGFRPAEELEGTSEGE*GDKELI Trigger: AATTAGTTCTTTGTCTCCCAATTCACCCTCAGAGGT...CCCTTCCAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTGGGGAATTTATCAGTTCCTGGTGCCTCGGGGTCCAGGGAGGATATCACAACCTCTGAGGGTGAATaGGGAGACAAAGAACTAATT | + |
|
Preference number: 3 (lower is better) Translates to: KLGNLSVPGASGSREDITTSEGE*GDKELI Trigger: AATTAGTTCTTTGTCTCCCAATTCACCCTCAGAGGT...TGTGATATCCTCCCTGGACCCCGAGGCACCAGGAACTGATAAATTCCCCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR GCA 72 bp | CAGGGCACTTACGCTGATGGATGTGGCAGAGCAGTATaGTTTTCCTGTGGAGATCTGAACACACTTCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QGTYADGCGRAV*FSCGDLNTLLL Trigger: TAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCTCTGCCACATCCATCAGCGTAAGTGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGTAGATACTTTGTAGCAGTGGGAACATACCATCTAAAATATGAGAGTGGGGATGCTGGAAACCTTTaGCAGCCCCTAAAATCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TGRYFVAVGTYHLKYESGDAGNL*QPLKSS Trigger: GGAGGATTTTAGGGGCTGCAAAAGGTTTCCAGCATC...CCCACTCTCATATTTTAGATGGTATGTTCCCACTGCTACAAAGTATCTACCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR CCA 72 bp | GGAAGGGAAGTTGTGGGTTTCGACCAGCAGAGGAACTaGAAGGGATATTTATTTCAGTTAACAGGACACAAT | + |
|
Preference number: 3 (lower is better) Translates to: GREVVGFDQQRN*KGYLFQLTGHN Trigger: ATTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR TCA 72 bp | CCCAGGTCAAATGAGAGTCCTCTAACAGATCTCCTTTaGAGTTGTTCTGAGAAATATATACCGCATATGATA | + |
|
Preference number: 3 (lower is better) Translates to: PRSNESPLTDLL*SCSEKYIPHMI Trigger: TATCATATGCGGTATATATTTCTCAGAACAACTTCAAAGGAGATCTGTTAGAGGACTCTCATTTGACCTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR TCA 72 bp | TGGAAGGGATATTTATTTCAGTTAACAGGACACAATTaGTTGTTTCTCCCAAGCTGGGGAATTTATCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WKGYLFQLTGHN*LFLPSWGIYQF Trigger: GAACTGATAAATTCCCCAGCTTGGGAGAAACAATCAATTGTGTCCTGTTAACTGAAATAAATATCCCTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| 3UTR CAA 72 bp | AGACAGCATGCCCCAAGCTCCTGCAGGGAAGGGAAGTaGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQHAPSSCREGK*WVSTSRGTGRD Trigger: ATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGCTTGGGGCATGCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGGGTGCAGGGCACTTACGCTGATGGATGTGGCAGAGCAGTATGCTTTTCCCCTGATGGCCATCGGTaGAGAAAACATGCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TWVQGTYADGCGRAVCFSPDGHR*RKHACP Trigger: AGGACAAGCATGTTTTCTGCACCGATGGCCATCAGG...GGAAAAGCATACTGCTCTGCCACATCCATCAGCGTAAGTGCCCTGCACCCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCCAAACACAGAGCAAAGGACAGGAATGAGACAGCATGCCCCAAGCTCCTGCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: KAKHRAKDRNETACPKLLLWGCF*RKAGAM Trigger: CATAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...CAGGAGCTTGGGGCATGCTGTCTCATTCCTGTCCTTTGCTCTGTGTTTGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR TCA 90 bp | CACAGTGGGTCCAATGGTTCGTTGCCTGCTTCCTCATGGTTCTTTGCTGACATTCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: HSGSNGSLPASSWFFADILWGCF*RKAGAM Trigger: CATAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...AATGTCAGCAAAGAACCATGAGGAAGCAGGCAACGAACCATTGGACCCACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCTGCAGGGAAGGGAAGTTGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGGAGAACAAAATGATTTaGATGTCTTTGTCAGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: APAGKGSCGFRPAEELEGENKMI*MSLSVR Trigger: CCGAACTGACAAAGACATGCAAATCATTTTGTTCTC...CCCTTCCAGTTCCTCTGCTGGTCGAAACCCACAACTTCCCTTCCCTGCAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCCCTGATGGCCATCGGTaGAGAAAACATGCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSMLFLWRSEHTSVTGAPDGHR*RKHACP Trigger: AGGACAAGCATGTTTTCTGCACCGATGGCCATCAGG...GGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
||
| 3UTR CAA 72 bp | GGAGGATATCACATCCACAGTGGGTCCAATGGTTCGTaGCCTGCTTCCTCATGGTTCTTTGCTGACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGYHIHSGSNGS*PASSWFFADIS Trigger: AGAAATGTCAGCAAAGAACCATGAGGAAGCAGGCAACGAACCATTGGACCCACTGTGGATGTGATATCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCTCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RAVCFSCGDLNTLLLLVPLWGCF*RKAGAM Trigger: CATAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...AGGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGCTCTGGGGATGCTTTTaGAGAAAGGCTGGTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: CGFRPAEELEGIFISVNRLWGCF*RKAGAM Trigger: CATAGCACCAGCCTTTCTTCAAAAGCATCCCCAGAG...CCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTATACATTCCCATAACACACCTACCAGAGGAATGAACAGGTCAAATCACTTGAAGAAAGGCTGGTaGTATGAAGGTGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLIHSHNTPTRGMNRSNHLKKGW*YEGAGP Trigger: AGGCCCAGCACCTTCATAGCACCAGCCTTTCTTCAA...GTGATTTGACCTGTTCATTCCTCTGGTAGGTGTGTTATGGGAATGTATAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCTTTATAAGCAGCATTAGTTaGGTTAGGGACAAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSMLFLWRSEHTSVTGAFISSIS*VRDKKA Trigger: TGCTTTCTTGTCCCTAACCCAACTAATGCTGCTTAT...AAAGGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGAAAACATGCTTGTCCTaGAGTAACTCAGAGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CGFRPAEELEGIFISVNRKTCLS*SNSEVE Trigger: TTCTACCTCTGAGTTACTCCAGGACAAGCATGTTTT...CCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
||
| 3UTR CAA 72 bp | ATAACGGTCTACAGGAAGAACACAAACATGGCATCCTaGCTGGAGAATTTTGTCTGCCTCTTGATTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ITVYRKNTNMAS*LENFVCLLILL Trigger: CAGTAAAATCAAGAGGCAGACAAAATTCTCCAGCAAGGATGCCATGTTTGTGTTCTTCCTGTAGACCGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCTTTGAGAACAAAATGATTTaGATGTCTTTGTCAGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSMLFLWRSEHTSVTGAFENKMI*MSLSVR Trigger: CCGAACTGACAAAGACATGCAAATCATTTTGTTCTC...AAAGGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGTAGATACTTTGTAGCAGTGGGAACATACCATCTAAAATATGAGAGTGGGATAAGCAGCATTAGTTaGGTTAGGGACAAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGRYFVAVGTYHLKYESGISSIS*VRDKKA Trigger: TGCTTTCTTGTCCCTAACCCAACTAATGCTGCTTAT...CCCACTCTCATATTTTAGATGGTATGTTCCCACTGCTACAAAGTATCTACCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTATACATTCCCATAACACACCTACCAGAGGAATGAACAGGTCAAATCACAAAACATGCTTGTCCTaGAGTAACTCAGAGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLIHSHNTPTRGMNRSNHKTCLS*SNSEVE Trigger: TTCTACCTCTGAGTTACTCCAGGACAAGCATGTTTT...GTGATTTGACCTGTTCATTCCTCTGGTAGGTGTGTTATGGGAATGTATAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
||
| 3UTR CAA 72 bp | CTGGAAGGGATATTTATTTCAGTTAACAGGACACAATaGATTGTTTCTCCCAAGCTGGGGAATTTATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LEGIFISVNRTQ*IVSPKLGNLSV Trigger: AACTGATAAATTCCCCAGCTTGGGAGAAACAATCAATTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCTTGCTGGGCCTGCTTCTaGTGCCTCCATAGGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAVCFSCGDLNTLLLLVPCWACF*CLHRRA Trigger: GGCTCTCCTATGGAGGCACAAGAAGCAGGCCCAGCA...AGGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCTTTTGCTGGGCCTGCTTCTaGTGCCTCCATAGGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSMLFLWRSEHTSVTGAFCWACF*CLHRRA Trigger: GGCTCTCCTATGGAGGCACAAGAAGCAGGCCCAGCA...AAAGGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGGTTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGTGCTGGGCCTGCTTCTaGTGCCTCCATAGGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CGFRPAEELEGIFISVNRCWACF*CLHRRA Trigger: GGCTCTCCTATGGAGGCACAAGAAGCAGGCCCAGCA...CCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAACCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226925.2 ENSMUST00000227669.2 ENSMUST00000228485.2 ENSMUST00000228642.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGTATGCTTTTCCTGTGGAGATCTGAACACACTTCTGTTACTGGTGCCTTTAGAGAACAAAATGATTaGCATGTCTTTGTCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSMLFLWRSEHTSVTGAFREQND*HVFVSS Trigger: CGAACTGACAAAGACATGCAAATCATTTTGTTCTCT...AAAGGCACCAGTAACAGAAGTGTGTTCAGATCTCCACAGGAAAAGCATACTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
||
| CDS-3UTR CAA 90 bp | TTTCGACCAGCAGAGGAACTGGAAGGGATATTTATTTCAGTTAACAGGACACAAAGAGAACAAAATGATTaGCATGTCTTTGTCAGTTCG | + |
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Preference number: 5 (lower is better) Translates to: FRPAEELEGIFISVNRTQREQND*HVFVSS Trigger: CGAACTGACAAAGACATGCAAATCATTTTGTTCTCT...TTGTGTCCTGTTAACTGAAATAAATATCCCTTCCAGTTCCTCTGCTGGTCGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226925.2 ENSMUST00000228642.2 |
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| CDS GCA 72 bp | GAGACTGACAAGAAAGGCTTCCCTGATGGCCATCGGTaGAGAAAACATGCTTGTCCTGGAGTAACTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ETDKKGFPDGHR*RKHACPGVTQR Trigger: CCTCTGAGTTACTCCAGGACAAGCATGTTTTCTGCACCGATGGCCATCAGGGAAGCCTTTCTTGTCAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075158.2 ENSMUST00000226925.2 ENSMUST00000228642.2 |
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| CDS CCA 72 bp | GGCTTAGGCCTGTTCTCACCAAGGATCATGCAGACGTaGGCAATAAAAAGGATACTGTTAGCAGAGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: GLGLFSPRIMQT*AIKRILLAEIP Trigger: TGGGATCTCTGCTAACAGTATCCTTTTTATTGCCCACGTCTGCATGATCCTTGGTGAGAACAGGCCTAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075158.2 ENSMUST00000226925.2 ENSMUST00000228642.2 |
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| CDS GCA 72 bp | GAGATCCCAACACTCACTTCAGAGAACAAAATGATTTaGATGTCTTTGTCAGTTCGGAGCATATTGGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: EIPTLTSENKMI*MSLSVRSILAL Trigger: TAAGGCCAATATGCTCCGAACTGACAAAGACATGCAAATCATTTTGTTCTCTGAAGTGAGTGTTGGGATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075158.2 ENSMUST00000226925.2 ENSMUST00000228642.2 |
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| CDS CAA 72 bp | AGAGATCCCAACACTCACTTCAGAGAACAAAATGATTaGCATGTCTTTGTCAGTTCGGAGCATATTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: RDPNTHFREQND*HVFVSSEHIGL Trigger: AAGGCCAATATGCTCCGAACTGACAAAGACATGCAAATCATTTTGTTCTCTGAAGTGAGTGTTGGGATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075158.2 ENSMUST00000226925.2 ENSMUST00000228642.2 |
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