Pregenerated sensors for VMN1R39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093755Ensembl transcript IDs: ENSMUST00000226217.2, ENSMUST00000226783.2, ENSMUST00000227285.2, ENSMUST00000227555.2, ENSMUST00000228008.2, ENSMUST00000228651.2, ENSMUST00000228862.2, ENSMUST00000228919.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGCACGTTACATCAGTCTGTACTACCAGATCCAGGGGATTCCATaGCCTCATCTGACCTCTGTGAATACCGGGAATGCACACATGCAT | + |
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Preference number: 1 (lower is better) Translates to: MARYISLYYQIQGIP*PHLTSVNTGNAHMH Trigger: ATGCATGTGTGCATTCCCGGTATTCACAGAGGTCAGATGAGGTCATGGAATCCCCTGGATCTGGTAGTACAGACTGATGTAACGTGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATCCAGGGGATTCCATaGCCTCATCTGACCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LRALTALPEVLSSNPSNHIQGIP*PHLTSV Trigger: CACAGAGGTCAGATGAGGTCATGGAATCCCCTGGAT...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGGAATCTGTCAGACCTaGCTTTTCTCAGAGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: ALTALPEVLSSNPSNHMVGICQT*LFSEME Trigger: TTCCATCTCTGAGAAAAGTCAGGTCTGACAGATTCC...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR GCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGTGTGAATACCGGGAATaGACACATGCATACATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: ALTALPEVLSSNPSNHMVCEYRE*THAYMP Trigger: TGGCATGTATGCATGTGTGCATTCCCGGTATTCACA...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR CCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGACTTTTCTCAGAGATaGAATGTGACCTGGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: ALTALPEVLSSNPSNHMVDFSQR*NVTWEL Trigger: CAGTTCCCAGGTCACATTCCATCTCTGAGAAAAGTC...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATATCCAGGGGATTCCATaGCCTCATCTGACCTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: MSQWLRALTALPEVLSSNIQGIP*PHLTSV Trigger: CACAGAGGTCAGATGAGGTCATGGAATCCCCTGGAT...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR GCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCACACATGCATACATaGCAGGTCAAACCTAATACA | + |
|
Preference number: 2 (lower is better) Translates to: ALTALPEVLSSNPSNHMVAHMHT*QVKPNT Trigger: TGTATTAGGTTTGACCTGGCATGTATGCATGTGTGC...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACGGAATCTGTCAGACCTaGCTTTTCTCAGAGATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LRALTALPEVLSSNPSNHGICQT*LFSEME Trigger: TTCCATCTCTGAGAAAAGTCAGGTCTGACAGATTCC...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACGACTTTTCTCAGAGATaGAATGTGACCTGGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: LRALTALPEVLSSNPSNHDFSQR*NVTWEL Trigger: CAGTTCCCAGGTCACATTCCATCTCTGAGAAAAGTC...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGTGTACTCACATATATaGAATAAATATGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ALTALPEVLSSNPSNHMVVYSHI*NKYGWR Trigger: CCTCCAGCCATATTTATTTCATATATGTGAGTACAC...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR GCA 90 bp | CATCAGTCTGTACTACCAGATCCAGGGGATTCCATGACCTCATCTGACCTCTGTGCACACATGCATACATaGCAGGTCAAACCTAATACA | + |
|
Preference number: 2 (lower is better) Translates to: HQSVLPDPGDSMTSSDLCAHMHT*QVKPNT Trigger: TGTATTAGGTTTGACCTGGCATGTATGCATGTGTGC...ACAGAGGTCAGATGAGGTCATGGAATCCCCTGGATCTGGTAGTACAGACTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACGCACACATGCATACATaGCAGGTCAAACCTAATACA | + |
|
Preference number: 2 (lower is better) Translates to: LRALTALPEVLSSNPSNHAHMHT*QVKPNT Trigger: TGTATTAGGTTTGACCTGGCATGTATGCATGTGTGC...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACTGCAATGGGATCCAATaGACTCTTCTTGTGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LRALTALPEVLSSNPSNHCNGIQ*TLLVCL Trigger: CAAACACACAAGAAGAGTGCATTGGATCCCATTGCA...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATGGAATCTGTCAGACCTaGCTTTTCTCAGAGATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: MSQWLRALTALPEVLSSNGICQT*LFSEME Trigger: TTCCATCTCTGAGAAAAGTCAGGTCTGACAGATTCC...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATTGTGAATACCGGGAATaGACACATGCATACATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: MSQWLRALTALPEVLSSNCEYRE*THAYMP Trigger: TGGCATGTATGCATGTGTGCATTCCCGGTATTCACA...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR CCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGAGATGGAATGTGACCTaGGAACTGAAAACTAAAATA | + |
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Preference number: 2 (lower is better) Translates to: ALTALPEVLSSNPSNHMVRWNVT*ELKTKI Trigger: TATTTTAGTTTTCAGTTCCCAGGTCACATTCCATCT...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATTGCAATGGGATCCAATaGACTCTTCTTGTGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: MSQWLRALTALPEVLSSNCNGIQ*TLLVCL Trigger: CAAACACACAAGAAGAGTGCATTGGATCCCATTGCA...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACAGATGGAATGTGACCTaGGAACTGAAAACTAAAATA | + |
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Preference number: 2 (lower is better) Translates to: LRALTALPEVLSSNPSNHRWNVT*ELKTKI Trigger: TATTTTAGTTTTCAGTTCCCAGGTCACATTCCATCT...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATGTGTACTCACATATATaGAATAAATATGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: MSQWLRALTALPEVLSSNVYSHI*NKYGWR Trigger: CCTCCAGCCATATTTATTTCATATATGTGAGTACAC...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATAGATGGAATGTGACCTaGGAACTGAAAACTAAAATA | + |
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Preference number: 2 (lower is better) Translates to: MSQWLRALTALPEVLSSNRWNVT*ELKTKI Trigger: TATTTTAGTTTTCAGTTCCCAGGTCACATTCCATCT...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR CCA 72 bp | CCCAGCAACCACATGGTGACTCACAACCATCTGCAATaGGATCCAATGCACTCTTCTTGTGTGTTTGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: PSNHMVTHNHLQ*DPMHSSCVFED Trigger: ATCTTCAAACACACAAGAAGAGTGCATTGGATCCCATTGCAGATGGTTGTGAGTCACCATGTGGTTGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| 3UTR TCA 72 bp | AGTAATCAACTTCCATCTGCTGGAATCTGTCAGACCTaGCTTTTCTCAGAGATGGAATGTGACCTGGGAACT | + |
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Preference number: 3 (lower is better) Translates to: SNQLPSAGICQT*LFSEMECDLGT Trigger: AGTTCCCAGGTCACATTCCATCTCTGAGAAAAGTCAGGTCTGACAGATTCCAGCAGATGGAAGTTGATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGCTGATCATCACAGCCTaGAACACACTCAGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ALTALPEVLSSNPSNHMVLIITA*NTLRRQ Trigger: CTGCCTCCTGAGTGTGTTCCAGGCTGTGATGATCAG...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACCTGATCATCACAGCCTaGAACACACTCAGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LRALTALPEVLSSNPSNHLIITA*NTLRRQ Trigger: CTGCCTCCTGAGTGTGTTCCAGGCTGTGATGATCAG...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CCA 90 bp | CATCAGTCTGTACTACCAGATCCAGGGGATTCCATGACCTCATCTGACCTCTGTCTGATCATCACAGCCTaGAACACACTCAGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HQSVLPDPGDSMTSSDLCLIITA*NTLRRQ Trigger: CTGCCTCCTGAGTGTGTTCCAGGCTGTGATGATCAG...ACAGAGGTCAGATGAGGTCATGGAATCCCCTGGATCTGGTAGTACAGACTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR TCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGATGGGCTTAGATCTGTaGCACAGGATTATGATAGTG | + |
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Preference number: 4 (lower is better) Translates to: ALTALPEVLSSNPSNHMVMGLDL*HRIMIV Trigger: CACTATCATAATCCTGTGTCACAGATCTAAGCCCAT...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226217.2 ENSMUST00000227555.2 ENSMUST00000228862.2 |
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| CDS-3UTR TCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGAATTGGCTTTTGCTATaGAGATGCTTGCATTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ALTALPEVLSSNPSNHMVNWLLL*RCLHCL Trigger: GAGGCAATGCAAGCATCTTCATAGCAAAAGCCAATT...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR TCA 90 bp | CATCAGTCTGTACTACCAGATCCAGGGGATTCCATGACCTCATCTGACCTCTGTTGCTTGTGCTCAGCATaGCTCCTACAAGAAATACGT | + |
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Preference number: 4 (lower is better) Translates to: HQSVLPDPGDSMTSSDLCCLCSA*LLQEIR Trigger: ACGTATTTCTTGTAGGAGTCATGCTGAGCACAAGCA...ACAGAGGTCAGATGAGGTCATGGAATCCCCTGGATCTGGTAGTACAGACTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR TCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACTGCTTGTGCTCAGCATaGCTCCTACAAGAAATACGT | + |
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Preference number: 4 (lower is better) Translates to: LRALTALPEVLSSNPSNHCLCSA*LLQEIR Trigger: ACGTATTTCTTGTAGGAGTCATGCTGAGCACAAGCA...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR TCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGGCTTAGATCTGTaGCACAGGATTATGATAGTG | + |
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Preference number: 4 (lower is better) Translates to: LRALTALPEVLSSNPSNHMGLDL*HRIMIV Trigger: CACTATCATAATCCTGTGTCACAGATCTAAGCCCAT...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226217.2 ENSMUST00000227555.2 ENSMUST00000228862.2 |
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| CDS-3UTR TCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACAATTGGCTTTTGCTATaGAGATGCTTGCATTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LRALTALPEVLSSNPSNHNWLLL*RCLHCL Trigger: GAGGCAATGCAAGCATCTTCATAGCAAAAGCCAATT...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR TCA 90 bp | CATCAGTCTGTACTACCAGATCCAGGGGATTCCATGACCTCATCTGACCTCTGTAATTGGCTTTTGCTATaGAGATGCTTGCATTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HQSVLPDPGDSMTSSDLCNWLLL*RCLHCL Trigger: GAGGCAATGCAAGCATCTTCATAGCAAAAGCCAATT...ACAGAGGTCAGATGAGGTCATGGAATCCCCTGGATCTGGTAGTACAGACTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR GCA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGCTCTCAATTGGCTTTTaGTATGAAGATGCTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: ALTALPEVLSSNPSNHMVLSIGF*YEDACI Trigger: AATGCAAGCATCTTCATAGCAAAAGCCAATTGAGAG...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR TCA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATTGCTTGTGCTCAGCATaGCTCCTACAAGAAATACGT | + |
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Preference number: 4 (lower is better) Translates to: MSQWLRALTALPEVLSSNCLCSA*LLQEIR Trigger: ACGTATTTCTTGTAGGAGTCATGCTGAGCACAAGCA...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR GCA 90 bp | CATCAGTCTGTACTACCAGATCCAGGGGATTCCATGACCTCATCTGACCTCTGTCTCTCAATTGGCTTTTaGTATGAAGATGCTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: HQSVLPDPGDSMTSSDLCLSIGF*YEDACI Trigger: AATGCAAGCATCTTCATAGCAAAAGCCAATTGAGAG...ACAGAGGTCAGATGAGGTCATGGAATCCCCTGGATCTGGTAGTACAGACTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR GCA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACCTCTCAATTGGCTTTTaGTATGAAGATGCTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: LRALTALPEVLSSNPSNHLSIGF*YEDACI Trigger: AATGCAAGCATCTTCATAGCAAAAGCCAATTGAGAG...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR GCA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCTCTCAATTGGCTTTTaGTATGAAGATGCTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: MSQWLRALTALPEVLSSNLSIGF*YEDACI Trigger: AATGCAAGCATCTTCATAGCAAAAGCCAATTGAGAG...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGATGAAGATGCTTGCATaGCCTCTGGTGTCTGAACAA | + |
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Preference number: 5 (lower is better) Translates to: ALTALPEVLSSNPSNHMVMKMLA*PLVSEQ Trigger: TTGTTCAGACACCAGAGGCAATGCAAGCATCTTCAT...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGAGGGGATGCTCTCAATaGGCTTTTGCTATGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: ALTALPEVLSSNPSNHMVRGCSQ*AFAMKM Trigger: CATCTTCATAGCAAAAGCCAATTGAGAGCATCCCCT...CACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | CATCAGTCTGTACTACCAGATCCAGGGGATTCCATGACCTCATCTGACCTCTGTAATCCGTTGATGATGTaGTTCATGGGGAAGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: HQSVLPDPGDSMTSSDLCNPLMM*FMGKSE Trigger: CTCACTCTTCCCCATGAACAACATCATCAACGGATT...ACAGAGGTCAGATGAGGTCATGGAATCCCCTGGATCTGGTAGTACAGACTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACAATCCGTTGATGATGTaGTTCATGGGGAAGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LRALTALPEVLSSNPSNHNPLMM*FMGKSE Trigger: CTCACTCTTCCCCATGAACAACATCATCAACGGATT...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGAAGATGCTTGCATaGCCTCTGGTGTCTGAACAA | + |
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Preference number: 5 (lower is better) Translates to: LRALTALPEVLSSNPSNHMKMLA*PLVSEQ Trigger: TTGTTCAGACACCAGAGGCAATGCAAGCATCTTCAT...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | CATCAGTCTGTACTACCAGATCCAGGGGATTCCATGACCTCATCTGACCTCTGTAGGGGATGCTCTCAATaGGCTTTTGCTATGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: HQSVLPDPGDSMTSSDLCRGCSQ*AFAMKM Trigger: CATCTTCATAGCAAAAGCCAATTGAGAGCATCCCCT...ACAGAGGTCAGATGAGGTCATGGAATCCCCTGGATCTGGTAGTACAGACTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACAGGGGATGCTCTCAATaGGCTTTTGCTATGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: LRALTALPEVLSSNPSNHRGCSQ*AFAMKM Trigger: CATCTTCATAGCAAAAGCCAATTGAGAGCATCCCCT...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | CATCAGTCTGTACTACCAGATCCAGGGGATTCCATGACCTCATCTGACCTCTGTGTGAATGAAAGTCAATaGACAGGAGATCAAGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: HQSVLPDPGDSMTSSDLCVNESQ*TGDQVH Trigger: ATGGACTTGATCTCCTGTCAATTGACTTTCATTCAC...ACAGAGGTCAGATGAGGTCATGGAATCCCCTGGATCTGGTAGTACAGACTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | TTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACGTGAATGAAAGTCAATaGACAGGAGATCAAGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LRALTALPEVLSSNPSNHVNESQ*TGDQVH Trigger: ATGGACTTGATCTCCTGTCAATTGACTTTCATTCAC...GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATATGAAGATGCTTGCATaGCCTCTGGTGTCTGAACAA | + |
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Preference number: 5 (lower is better) Translates to: MSQWLRALTALPEVLSSNMKMLA*PLVSEQ Trigger: TTGTTCAGACACCAGAGGCAATGCAAGCATCTTCAT...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATAGGGGATGCTCTCAATaGGCTTTTGCTATGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: MSQWLRALTALPEVLSSNRGCSQ*AFAMKM Trigger: CATCTTCATAGCAAAAGCCAATTGAGAGCATCCCCT...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS-3UTR CAA 90 bp | ATGTCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATGTGAATGAAAGTCAATaGACAGGAGATCAAGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: MSQWLRALTALPEVLSSNVNESQ*TGDQVH Trigger: ATGGACTTGATCTCCTGTCAATTGACTTTCATTCAC...ATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000226217.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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| CDS CAA 72 bp | ACGTCTCTTAAGGTTACAATTGTTGAAGCCAATCCGTaGATGATGTTGTTCATGGGGAAGAGTGAGCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: TSLKVTIVEANP*MMLFMGKSEQY Trigger: ATACTGCTCACTCTTCCCCATGAACAACATCATCAACGGATTGGCTTCAACAATTGTAACCTTAAGAGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000226217.2 ENSMUST00000226783.2 ENSMUST00000227285.2 ENSMUST00000227555.2 ENSMUST00000228008.2 ENSMUST00000228651.2 ENSMUST00000228862.2 ENSMUST00000228919.2 |
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