Pregenerated sensors for VMN1R37 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000115467

Ensembl transcript IDs: ENSMUST00000226311.2, ENSMUST00000226886.2, ENSMUST00000226974.2, ENSMUST00000227923.2, ENSMUST00000228791.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR GCA 90 bp	CTGCACCAGCATGGCACCTTAAAAACATCTCTACCTCCAGATCCAGAGGATCGCGTATACATGCATACATaGCAGTCTGAAACTGATACA	+
Preference number: 2 (lower is better) Translates to: LHQHGTLKTSLPPDPEDRVYMHT*QSETDT Trigger: TGTATCAGTTTCAGACTGGCATGTATGCATGTATAC...GCGATCCTCTGGATCTGGAGGTAGAGATGTTTTTAAGGTGCCATGCTGGTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000226311.2 ENSMUST00000226886.2 ENSMUST00000226974.2 ENSMUST00000227923.2 ENSMUST00000228791.2
3UTR-3UTR GCA 90 bp	TTATTGGTGCTGCACCAGCATGGCACCTTAAAAACATCTCTACCTCCAGATCCAGTATACATGCATACATaGCAGTCTGAAACTGATACA	+
Preference number: 2 (lower is better) Translates to: LLVLHQHGTLKTSLPPDPVYMHT*QSETDT Trigger: TGTATCAGTTTCAGACTGGCATGTATGCATGTATAC...TGGATCTGGAGGTAGAGATGTTTTTAAGGTGCCATGCTGGTGCAGCACCAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000226311.2 ENSMUST00000226886.2 ENSMUST00000226974.2 ENSMUST00000227923.2 ENSMUST00000228791.2
CDS-3UTR CCA 90 bp	CTGCACCAGCATGGCACCTTAAAAACATCTCTACCTCCAGATCCAGAGGATCGCTGGTCTCACTCACATTaGTATAAGCGCCAGTATAGA	+
Preference number: 4 (lower is better) Translates to: LHQHGTLKTSLPPDPEDRWSHSH*YKRQYR Trigger: TCTATACTGGCGCTTATACCAATGTGAGTGAGACCA...GCGATCCTCTGGATCTGGAGGTAGAGATGTTTTTAAGGTGCCATGCTGGTGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226974.2 ENSMUST00000227923.2 ENSMUST00000228791.2
CDS-3UTR TCA 90 bp	CTGCACCAGCATGGCACCTTAAAAACATCTCTACCTCCAGATCCAGAGGATCGCTGGGATAGACATTCATaGCAAACTTCTGAACAGTCA	+
Preference number: 4 (lower is better) Translates to: LHQHGTLKTSLPPDPEDRWDRHS*QTSEQS Trigger: TGACTGTTCAGAAGTTTGTCATGAATGTCTATCCCA...GCGATCCTCTGGATCTGGAGGTAGAGATGTTTTTAAGGTGCCATGCTGGTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000226311.2 ENSMUST00000226886.2 ENSMUST00000226974.2 ENSMUST00000227923.2 ENSMUST00000228791.2
CDS-3UTR CCA 90 bp	TTATTGGTGCTGCACCAGCATGGCACCTTAAAAACATCTCTACCTCCAGATCCATGGTCTCACTCACATTaGTATAAGCGCCAGTATAGA	+
Preference number: 4 (lower is better) Translates to: LLVLHQHGTLKTSLPPDPWSHSH*YKRQYR Trigger: TCTATACTGGCGCTTATACCAATGTGAGTGAGACCA...TGGATCTGGAGGTAGAGATGTTTTTAAGGTGCCATGCTGGTGCAGCACCAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226974.2 ENSMUST00000227923.2 ENSMUST00000228791.2
CDS-3UTR TCA 90 bp	TTATTGGTGCTGCACCAGCATGGCACCTTAAAAACATCTCTACCTCCAGATCCACCGGTTAATGCTGAATaGCAAATTGAAAGACCAAAA	+
Preference number: 4 (lower is better) Translates to: LLVLHQHGTLKTSLPPDPPVNAE*QIERPK Trigger: TTTTGGTCTTTCAATTTGTCATTCAGCATTAACCGG...TGGATCTGGAGGTAGAGATGTTTTTAAGGTGCCATGCTGGTGCAGCACCAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226974.2 ENSMUST00000227923.2 ENSMUST00000228791.2
CDS-3UTR TCA 90 bp	ATTTCTTCTGACATCTGTGGATACCAGGAATGTATACATGCATACATGCCAGTCTGGGATAGACATTCATaGCAAACTTCTGAACAGTCA	+
Preference number: 4 (lower is better) Translates to: ISSDICGYQECIHAYMPVWDRHS*QTSEQS Trigger: TGACTGTTCAGAAGTTTGTCATGAATGTCTATCCCA...GACTGGCATGTATGCATGTATACATTCCTGGTATCCACAGATGTCAGAAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000226311.2 ENSMUST00000226886.2 ENSMUST00000226974.2 ENSMUST00000227923.2 ENSMUST00000228791.2
CDS-3UTR TCA 90 bp	ATTTCTTCTGACATCTGTGGATACCAGGAATGTATACATGCATACATGCCAGTCCCGGTTAATGCTGAATaGCAAATTGAAAGACCAAAA	+
Preference number: 4 (lower is better) Translates to: ISSDICGYQECIHAYMPVPVNAE*QIERPK Trigger: TTTTGGTCTTTCAATTTGTCATTCAGCATTAACCGG...GACTGGCATGTATGCATGTATACATTCCTGGTATCCACAGATGTCAGAAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226974.2 ENSMUST00000227923.2 ENSMUST00000228791.2