Pregenerated sensors for VMN1R3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000115466

Ensembl transcript IDs: ENSMUST00000105159.5

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	AGCAGGTGCACAAGGCAACTGACTGAGCAGGAGGGACCAATGTACTaGGTTGCTCTGTATTTAAGCTTTATCCACCTGGAGTTATTGGGG	+
Preference number: 6 (lower is better) Translates to: SRCTRQLTEQEGPMY*VALYLSFIHLELLG Trigger: CCCCAATAACTCCAGGTGGATAAAGCTTAAATACAGAGCAACCAAGTACATTGGTCCCTCCTGCTCAGTCAGTTGCCTTGTGCACCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105159.5
CDS GCA 72 bp	GATTCTCTTAGTGGAGTCAAGATGTTTAGAAGCAGGTaGACAAGGCAACTGACTGAGCAGGAGGGACCAATG	+
Preference number: 6 (lower is better) Translates to: DSLSGVKMFRSR*TRQLTEQEGPM Trigger: CATTGGTCCCTCCTGCTCAGTCAGTTGCCTTGTGCACCTGCTTCTAAACATCTTGACTCCACTAAGAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105159.5
CDS CAA 90 bp	CTCTTACCTAAGCAGGGTAAAAACAGATTGGAACTAGATCTCATATaGGTGATGAGAACAAAGGGACAAAACATGGGAAAGAATATTTCT	+
Preference number: 6 (lower is better) Translates to: LLPKQGKNRLELDLI*VMRTKGQNMGKNIS Trigger: AGAAATATTCTTTCCCATGTTTTGTCCCTTTGTTCTCATCACCAATATGAGATCTAGTTCCAATCTGTTTTTACCCTGCTTAGGTAAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105159.5

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