Pregenerated sensors for VMN1R29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091734Ensembl transcript IDs: ENSMUST00000168416.2, ENSMUST00000226971.2, ENSMUST00000227761.2, ENSMUST00000228038.2, ENSMUST00000228909.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTCTTGTGAGGCTATGCTGGTGTCTGGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGTTGGAACACAGGGCCCCCAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: VSCEAMLVSGKHRSG*SQSAIGWNTGPPMK Trigger: CTTCATTGGGGGCCCTGTGTTCCAACCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCCAGACACCAGCATAGCCTCACAAGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR TCA 90 bp | GAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCATCCTCTGTaGGGTACCCAATCACAAAAGAACTCACATGATATGTACTCACTG | + |
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Preference number: 1 (lower is better) Translates to: EIPRQMDEPGGHHPL*GTQSQKNSHDMYSL Trigger: CAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTACCTCACAGAGGATGATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR GCA 90 bp | ATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGATTTTaGAGAAAGAACCCTGATATAGCTGTCTCTTGTGAGGCTATGCTG | + |
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Preference number: 1 (lower is better) Translates to: IRLQMLTPLHMPARF*RKNPDIAVSCEAML Trigger: CAGCATAGCCTCACAAGAGACAGCTATATCAGGGTTCTTTCTGCAAAATCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR CCA 90 bp | AAGGTGGTGACTACTACAGTCTTTACTCCTGTAGGTCAGAATTTATaGTTCTGGAAGGAAACTTGCATACTACCAAAGGAGAAAGGTCAA | + |
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Preference number: 1 (lower is better) Translates to: KVVTTTVFTPVGQNL*FWKETCILPKEKGQ Trigger: TTGACCTTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTGACCTACAGGAGTAAAGACTGTAGTAGTCACCACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR CCA 90 bp | GATAATCAGTTCAATATAATTGAGTTGTTGATTAAATGGGGTCTATaGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: DNQFNIIELLIKWGL*EPPNSPKYCQGIKA Trigger: GGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAACTCAATTATATTGAACTGATTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGAGGAACAACAGCCAAAGTTGTCTCCTGGCCTCCATGTGCACATATACAAAGAGGGAGGGTTGGTaGGCAGGGAGAGAGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: QVRNNSQSCLLASMCTYTKREGW*AGREDW Trigger: CCAATCCTCTCTCCCTGCTCACCAACCCTCCCTCTT...TGTATATGTGCACATGGAGGCCAGGAGACAACTTTGGCTGTTGTTCCTCACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATCCCAGTGTAGGGAAATaGCAGGGCCAGGAAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PELMSLAAYVAEEGLVGHPSVGK*QGQEAE Trigger: TTCTGCTTCCTGGCCCTGGCATTTCCCTACACTGGG...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGAAGAGGGAGGGTTGGTaGGCAGGGAGAGAGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGKREGW*AGREDW Trigger: CCAATCCTCTCTCCCTGCTCACCAACCCTCCCTCTT...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR CAA 90 bp | GGTGTCTGGCAAACACAGAAGTGGATGATCACAGTCAGCTATTGGTaGGAACACAGGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAA | + |
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Preference number: 2 (lower is better) Translates to: GVWQTQKWMITVSYW*EHRAPNEGARESTQ Trigger: TTGGGTACTTTCTCTAGCTCCTTCATTGGGGGCCCTGTGTTCCAACCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCCAGACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAAAGAGGGAGGGTTGGTaGGCAGGGAGAGAGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARKREGW*AGREDW Trigger: CCAATCCTCTCTCCCTGCTCACCAACCCTCCCTCTT...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATAAGAGGGAGGGTTGGTaGGCAGGGAGAGAGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYKREGW*AGREDW Trigger: CCAATCCTCTCTCCCTGCTCACCAACCCTCCCTCTT...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATCCCAGTGTAGGGAAATaGCAGGGCCAGGAAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYPSVGK*QGQEAE Trigger: TTCTGCTTCCTGGCCCTGGCATTTCCCTACACTGGG...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAATACTTCTAATCCCAGAATGGGAGAGGTGGAAACTGGAAGAGCCATGATACCCAGTGTAGGGAAATaGCAGGGCCAGGAAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: VNTSNPRMGEVETGRAMIPSVGK*QGQEAE Trigger: TTCTGCTTCCTGGCCCTGGCATTTCCCTACACTGGG...TATCATGGCTCTTCCAGTTTCCACCTCTCCCATTCTGGGATTAGAAGTATTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATGGATGGGGTAGGAGGTaGGGAGGAACTATAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYGWGRR*GGTIRN Trigger: GTTCCTTATAGTTCCTCCTCACCTCCTACCCCATCC...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATCTCCTGGCCTCCATGTaGACATATACACACATTCTT | + |
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Preference number: 2 (lower is better) Translates to: PELMSLAAYVAEEGLVGHLLASM*TYTHIL Trigger: AAGAATGTGTGTATATGTGCACATGGAGGCCAGGAG...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATGAGGCCCCTTGGTCTTaGAAACTTTATATGCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: PELMSLAAYVAEEGLVGHEAPWS*KLYMPH Trigger: ATGAGGCATATAAAGTTTGCAAGACCAAGGGGCCTC...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATGAGAGGAAAGGCCCCTaGTCCTGTGAAGGTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYERKGP*SCEGFM Trigger: CATAAAACCTTCACAGGACCAGGGGCCTTTCCTCTC...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAGAGAGGAAAGGCCCCTaGTCCTGTGAAGGTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARERKGP*SCEGFM Trigger: CATAAAACCTTCACAGGACCAGGGGCCTTTCCTCTC...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATTATAAAGACACAAGGTaGATGGCAAGTGAGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: PELMSLAAYVAEEGLVGHYKDTR*MASEEQ Trigger: TTGTTCCTCACTTGCCATTCACCTTGTGTCTTTATA...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATAGAGGATGGCTTACTTaGTCATTAATGAGAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PELMSLAAYVAEEGLVGHRGWLT*SLMRGK Trigger: CTTTCCTCTCATTAATGACCAAGTAAGCCATCCTCT...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGAAGACACAAGGTGAATaGCAAGTGAGGAACAACAGC | + |
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Preference number: 2 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGKTQGE*QVRNNS Trigger: GCTGTTGTTCCTCACTTGCCATTCACCTTGTGTCTT...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGCTTCTAATCCCAGAATaGGAGAGGTGGAAACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGLLIPE*ERWKLE Trigger: TTCCAGTTTCCACCTCTCCCATTCTGGGATTAGAAG...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATAGCACTGTAAGTATCTaGAATGAGATAGATGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: PELMSLAAYVAEEGLVGHSTVSI*NEIDEG Trigger: TCCTTCATCTATCTCATTTCAGATACTTACAGTGCT...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATCTCCTGGCCTCCATGTaGACATATACACACATTCTT | + |
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Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYLLASM*TYTHIL Trigger: AAGAATGTGTGTATATGTGCACATGGAGGCCAGGAG...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGAACTGTTTAGGGTGTaGCTGTGGTGTCCTAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQELFRV*LWCPRV Trigger: TACTCTAGGACACCACAGGCACACCCTAAACAGTTC...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAGCTCATGTCTCTTGCTaGATATGTAGCAGAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARAHVSC*ICSRRR Trigger: CCTTCTTCTGCTACATATGCAGCAAGAGACATGAGC...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAATACTTCTAATCCCAGAATGGGAGAGGTGGAAACTGGAAGAGCCATGATAAAGACACAAGGTGAATaGCAAGTGAGGAACAACAGC | + |
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Preference number: 2 (lower is better) Translates to: VNTSNPRMGEVETGRAMIKTQGE*QVRNNS Trigger: GCTGTTGTTCCTCACTTGCCATTCACCTTGTGTCTT...TATCATGGCTCTTCCAGTTTCCACCTCTCCCATTCTGGGATTAGAAGTATTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAGGGAGAGGTGGAAACTaGAAGAGCCATGATATTATG | + |
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Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARGRGGN*KSHDIM Trigger: CATAATATCATGGCTCTTCCAGTTTCCACCTCTCCC...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATACAGTCAACCCTGTATaGAAAGTCTCCATAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: PELMSLAAYVAEEGLVGHTVNPV*KVSIKF Trigger: GAATTTTATGGAGACTTTCCATACAGGGTTGACTGT...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCGGATGGGGTAGGAGGTaGGGAGGAACTATAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIGWGRR*GGTIRN Trigger: GTTCCTTATAGTTCCTCCTCACCTCCTACCCCATCC...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGT | + |
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Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARKHRSG*SQSAIG Trigger: ACCAATAGCTGACTGTGATCATCCACTTCTGTGTTT...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCCCCAGTGTAGGGAAATaGCAGGGCCAGGAAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SLKHEIHEIETISSTVSIPSVGK*QGQEAE Trigger: TTCTGCTTCCTGGCCCTGGCATTTCCCTACACTGGG...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGCTCTTCTTACCTCTGTaGGCACTAGGAATATACAAT | + |
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Preference number: 2 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGLFLPL*ALGIYN Trigger: ATTGTATATTCCTAGTGCCCACAGAGGTAAGAAGAG...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAAAGACACAAGGTGAATaGCAAGTGAGGAACAACAGC | + |
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Preference number: 2 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQKTQGE*QVRNNS Trigger: GCTGTTGTTCCTCACTTGCCATTCACCTTGTGTCTT...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGGAGAGGTGGAAACTaGAAGAGCCATGATATTATG | + |
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Preference number: 2 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQGRGGN*KSHDIM Trigger: CATAATATCATGGCTCTTCCAGTTTCCACCTCTCCC...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAACTTCTAATCCCAGAATaGGAGAGGTGGAAACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQLLIPE*ERWKLE Trigger: TTCCAGTTTCCACCTCTCCCATTCTGGGATTAGAAG...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATCAGAATTTATGGTTCTaGAAGGAAACTTGCATACTA | + |
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Preference number: 2 (lower is better) Translates to: PELMSLAAYVAEEGLVGHQNLWF*KETCIL Trigger: TAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTG...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGATGGCAAACACAGAAGTaGATGATCACAGTCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARWQTQK*MITVSY Trigger: ATAGCTGACTGTGATCATCCACTTCTGTGTTTGCCA...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATTATAAAGACACAAGGTaGATGGCAAGTGAGGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYYKDTR*MASEEQ Trigger: TTGTTCCTCACTTGCCATTCACCTTGTGTCTTTATA...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCGGATGGGGTAGGAGGTaGGGAGGAACTATAAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SLKHEIHEIETISSTVSIGWGRR*GGTIRN Trigger: GTTCCTTATAGTTCCTCCTCACCTCCTACCCCATCC...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGAGCACTGTAAGTATCTaGAATGAGATAGATGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGSTVSI*NEIDEG Trigger: TCCTTCATCTATCTCATTTCAGATACTTACAGTGCT...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGACATTCCTATAAGATGTaGTCATGCAATAGTAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARHSYKM*SCNSRP Trigger: TGGCCTACTATTGCATGAGCACATCTTATAGGAATG...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGATATGTAGCAGAGGATaGCTTACTTGGTCATTAATG | + |
|
Preference number: 2 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGICSRG*LTWSLM Trigger: CATTAATGACCAAGTAAGCCATCCTCTGCTACATAT...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATATGCCTGACAGTAGATaGACAACACAAAACAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYMPDSR*TTQNSL Trigger: AAGACTGTTTTGTGTTGTCCATCTACTGTCAGGCAT...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAAGCACTGTAAGTATCTaGAATGAGATAGATGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARSTVSI*NEIDEG Trigger: TCCTTCATCTATCTCATTTCAGATACTTACAGTGCT...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGATTAAAGCCATATTCCTaGATACAGCAATTGCACAAC | + |
|
Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARLKPYS*IQQLHN Trigger: GTTGTGCAATTGCTGTATTCAGGAATATGGCTTTAA...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCGAACTGTTTAGGGTGTaGCTGTGGTGTCCTAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIELFRV*LWCPRV Trigger: TACTCTAGGACACCACAGGCACACCCTAAACAGTTC...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAACATTCCTATAAGATGTaGTCATGCAATAGTAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQHSYKM*SCNSRP Trigger: TGGCCTACTATTGCATGAGCACATCTTATAGGAATG...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATTTCTGGAAGGAAACTTaGATACTACCAAAGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYFWKET*ILPKEK Trigger: TTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAA...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAAGAGGATGGCTTACTTaGTCATTAATGAGAGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQRGWLT*SLMRGK Trigger: CTTTCCTCTCATTAATGACCAAGTAAGCCATCCTCT...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAATATGTAGCAGAGGATaGCTTACTTGGTCATTAATG | + |
|
Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARICSRG*LTWSLM Trigger: CATTAATGACCAAGTAAGCCATCCTCTGCTACATAT...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAATACTTCTAATCCCAGAATGGGAGAGGTGGAAACTGGAAGAGCCATGATAATATGTAGCAGAGGATaGCTTACTTGGTCATTAATG | + |
|
Preference number: 2 (lower is better) Translates to: VNTSNPRMGEVETGRAMIICSRG*LTWSLM Trigger: CATTAATGACCAAGTAAGCCATCCTCTGCTACATAT...TATCATGGCTCTTCCAGTTTCCACCTCTCCCATTCTGGGATTAGAAGTATTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGGAACTCTATAGTGCTTaGAAACAGAAATGCCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGELYSA*KQKCQK Trigger: TTTTTGGCATTTCTGTTTCCAAGCACTATAGAGTTC...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAATTTATGGTTCTGGAAGGAAACTTGCATACTACCAAAGGAGAAAGGTCACTTCTAATCCCAGAATaGGAGAGGTGGAAACTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SEFMVLEGNLHTTKGERSLLIPE*ERWKLE Trigger: TTCCAGTTTCCACCTCTCCCATTCTGGGATTAGAAG...TGACCTTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAATGCCTGACAGTAGATaGACAACACAAAACAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQMPDSR*TTQNSL Trigger: AAGACTGTTTTGTGTTGTCCATCTACTGTCAGGCAT...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGATCTTCAGTCTACAATaGTGTGTCATTCCTATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGIFSLQ*CVIPIR Trigger: TCTTATAGGAATGACACACCATTGTAGACTGAAGAT...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGCAGAATTTATGGTTCTaGAAGGAAACTTGCATACTA | + |
|
Preference number: 2 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGQNLWF*KETCIL Trigger: TAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTG...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCAAGGTGAATGGCAAGTaGGGAACAACAGCCAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIKVNGK*GTTAKV Trigger: AACTTTGGCTGTTGTTCCTCACTTGCCATTCACCTT...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATGAACTCTATAGTGCTTaGAAACAGAAATGCCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYELYSA*KQKCQK Trigger: TTTTTGGCATTTCTGTTTCCAAGCACTATAGAGTTC...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCAAGACACAAGGTGAATaGCAAGTGAGGAACAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIKTQGE*QVRNNS Trigger: GCTGTTGTTCCTCACTTGCCATTCACCTTGTGTCTT...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAACAGTCAACCCTGTATaGAAAGTCTCCATAAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQTVNPV*KVSIKF Trigger: GAATTTTATGGAGACTTTCCATACAGGGTTGACTGT...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATATCTTCAGTCTACAATaGTGTGTCATTCCTATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VYGNPQTAQSIVKALKPYIFSLQ*CVIPIR Trigger: TCTTATAGGAATGACACACCATTGTAGACTGAAGAT...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAGGTATGAAGGACTTTTaGGATACCATTTCAAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: IHPIIRLQMLTPLHMPARGMKDF*DTISNV Trigger: TACATTTGAAATGGTATCCCAAAAGTCCTTCATACC...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGAATTTATGGTTCTGGAAGGAAACTTGCATACTACCAAAGGAGAAAGGTCATATAAAGACACAAGGTaGATGGCAAGTGAGGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: SEFMVLEGNLHTTKGERSYKDTR*MASEEQ Trigger: TTGTTCCTCACTTGCCATTCACCTTGTGTCTTTATA...TGACCTTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAATTTATGGTTCTGGAAGGAAACTTGCATACTACCAAAGGAGAAAGGTCACTCTTCTTACCTCTGTaGGCACTAGGAATATACAAT | + |
|
Preference number: 2 (lower is better) Translates to: SEFMVLEGNLHTTKGERSLFLPL*ALGIYN Trigger: ATTGTATATTCCTAGTGCCCACAGAGGTAAGAAGAG...TGACCTTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCCTTCTAATCCCAGAATaGGAGAGGTGGAAACTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SLKHEIHEIETISSTVSILLIPE*ERWKLE Trigger: TTCCAGTTTCCACCTCTCCCATTCTGGGATTAGAAG...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAATCTTCAGTCTACAATaGTGTGTCATTCCTATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQIFSLQ*CVIPIR Trigger: TCTTATAGGAATGACACACCATTGTAGACTGAAGAT...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCTGGCAAACACAGAAGTaGATGATCACAGTCAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIWQTQK*MITVSY Trigger: ATAGCTGACTGTGATCATCCACTTCTGTGTTTGCCA...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCCTCTTCTTACCTCTGTaGGCACTAGGAATATACAAT | + |
|
Preference number: 2 (lower is better) Translates to: KKNEFMKFLGKWMNLEGILFLPL*ALGIYN Trigger: ATTGTATATTCCTAGTGCCCACAGAGGTAAGAAGAG...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCAGAGGATGGCTTACTTaGTCATTAATGAGAGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIRGWLT*SLMRGK Trigger: CTTTCCTCTCATTAATGACCAAGTAAGCCATCCTCT...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAATTTATGGTTCTGGAAGGAAACTTGCATACTACCAAAGGAGAAAGGTCAACAGTCAACCCTGTATaGAAAGTCTCCATAAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: SEFMVLEGNLHTTKGERSTVNPV*KVSIKF Trigger: GAATTTTATGGAGACTTTCCATACAGGGTTGACTGT...TGACCTTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCTATAAAGACACAAGGTaGATGGCAAGTGAGGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: SLKHEIHEIETISSTVSIYKDTR*MASEEQ Trigger: TTGTTCCTCACTTGCCATTCACCTTGTGTCTTTATA...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCGAAACATATTACAGCTaGATATGTAGCAGAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: SLKHEIHEIETISSTVSIETYYS*ICSRGW Trigger: CCATCCTCTGCTACATATGCAGCTGTAATATGTTTC...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCTTCTGGAAGGAAACTTaGATACTACCAAAGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIFWKET*ILPKEK Trigger: TTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAA...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAATTTATGGTTCTGGAAGGAAACTTGCATACTACCAAAGGAGAAAGGTCAGAACTCTATAGTGCTTaGAAACAGAAATGCCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SEFMVLEGNLHTTKGERSELYSA*KQKCQK Trigger: TTTTTGGCATTTCTGTTTCCAAGCACTATAGAGTTC...TGACCTTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCGAACTCTATAGTGCTTaGAAACAGAAATGCCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SLKHEIHEIETISSTVSIELYSA*KQKCQK Trigger: TTTTTGGCATTTCTGTTTCCAAGCACTATAGAGTTC...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR GCA 72 bp | ATGAGAGGAAAGGCCCCTGGTCCTGTGAAGGTTTTATaGCCCAGTGTAGGGAAATGCCAGGGCCAGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MRGKAPGPVKVL*PSVGKCQGQEA Trigger: TGCTTCCTGGCCCTGGCATTTCCCTACACTGGGGCATAAAACCTTCACAGGACCAGGGGCCTTTCCTCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR TCA 72 bp | GAGGCTATGCTGGTGTCTGGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGTTGGAACACAGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: EAMLVSGKHRSG*SQSAIGWNTGP Trigger: GGGCCCTGTGTTCCAACCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCCAGACACCAGCATAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR GCA 72 bp | TGTGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATaGCTCATTACAGGGGAACACAAGGGCCAAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CEERPLGLANFI*LITGEHKGQEV Trigger: CACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAGAACAACAGCCAAAGTaGTCTCCTGGCCTCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: IHPIIRLQMLTPLHMPAREQQPK*SPGLHV Trigger: CACATGGAGGCCAGGAGACAACTTTGGCTGTTGTTC...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATCAGAGGATGGCTTACTaGGTCATTAATGAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PELMSLAAYVAEEGLVGHQRMAY*VINERK Trigger: TTTCCTCTCATTAATGACCAAGTAAGCCATCCTCTG...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATGTGTCTGTCTGTTTGTaGTGTTTTGCTTTGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: PELMSLAAYVAEEGLVGHVSVCL*CFALAH Trigger: ATGTGCCAAAGCAAAACACAACAAACAGACAGACAC...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATTCTCTGTGTGAGAACTaGTGTGTCTGTCTGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PELMSLAAYVAEEGLVGHSLCEN*CVCLFV Trigger: AACAAACAGACAGACACACAAGTTCTCACACAGAGA...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR CCA 72 bp | TATTACAGCTGCATATGTAGCAGAGGATGGCTTACTTaGTCATTAATGAGAGGAAAGGCCCCTGGTCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YYSCICSRGWLT*SLMRGKAPGPV Trigger: CACAGGACCAGGGGCCTTTCCTCTCATTAATGACCAAGTAAGCCATCCTCTGCTACATATGCAGCTGTAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGGAAAGAAATGTTAGTTaGGATGGGGTAGGAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGERNVS*DGVGGE Trigger: CTCACCTCCTACCCCATCCAAACTAACATTTCTTTC...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAAGAGGCCCCTTGGTCTaGCAAACTTTATATGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IHPIIRLQMLTPLHMPARRGPLV*QTLYAS Trigger: TGAGGCATATAAAGTTTGCAAGACCAAGGGGCCTCT...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGCAAACTTTATATGCCTCATTACAGGGGAACACAAGGGCCAAGAAGTGGGCAGAGGATGGCTTACTaGGTCATTAATGAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SCKLYMPHYRGTQGPRSGQRMAY*VINERK Trigger: TTTCCTCTCATTAATGACCAAGTAAGCCATCCTCTG...CCCACTTCTTGGCCCTTGTGTTCCCCTGTAATGAGGCATATAAAGTTTGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCGATCACAGTCAGCTATaGGTTGGAACACAGGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIDHSQL*VGTQGP Trigger: GGGGCCCTGTGTTCCAACCAATAGCTGACTGTGATC...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR TCA 72 bp | ACCCATGGAAGGAGTTACAGTGACAAAGTTTTGAGCTaGGATGAAAGGATGGACCATCTAGAGATTGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: THGRSYSDKVLS*DERMDHLEIAT Trigger: TGTGGCAATCTCTAGATGGTCCATCCTTTCATCTCAGCTCAAAACTTTGTCACTGTAACTCCTTCCATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAGTGTCTGTCTGTTTGTaGTGTTTTGCTTTGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: IHPIIRLQMLTPLHMPARVSVCL*CFALAH Trigger: ATGTGCCAAAGCAAAACACAACAAACAGACAGACAC...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGATCTCTGTGTGAGAACTaGTGTGTCTGTCTGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: IHPIIRLQMLTPLHMPARSLCEN*CVCLFV Trigger: AACAAACAGACAGACACACAAGTTCTCACACAGAGA...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATGTTCTGGAAGGAAACTaGCATACTACCAAAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VYGNPQTAQSIVKALKPYVLEGN*HTTKGE Trigger: TTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAAC...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR TCA 72 bp | ATATTAAAATGGACATGCATACAAACTCAGAGACTGTaGCAACGTGCACAGGAACTGTTTAGGGTGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ILKWTCIQTQRL*QRAQELFRVCL Trigger: CAGGCACACCCTAAACAGTTCCTGTGCACGTTGTCACAGTCTCTGAGTTTGTATGCATGTCCATTTTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR GCA 72 bp | CAAATGCTGACACCATTGCATATGCCAGCAAGATTTTaGAGAAAGAACCCTGATATAGCTGTCTCTTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QMLTPLHMPARF*RKNPDIAVSCE Trigger: CTCACAAGAGACAGCTATATCAGGGTTCTTTCTGCAAAATCTTGCTGGCATATGCAATGGTGTCAGCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGTGTCTGTCTGTTTGTaGTGTTTTGCTTTGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQVSVCL*CFALAH Trigger: ATGTGCCAAAGCAAAACACAACAAACAGACAGACAC...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAATCTCTGTGTGAGAACTaGTGTGTCTGTCTGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQSLCEN*CVCLFV Trigger: AACAAACAGACAGACACACAAGTTCTCACACAGAGA...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR TCA 72 bp | TCCTCTGTGAGGTACCCAATCACAAAAGAACTCACATaGTATGTACTCACTGATAAGTGGATATTAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSVRYPITKELT*YVLTDKWILAQ Trigger: CTGGGCTAATATCCACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTACCTCACAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR GCA 72 bp | CTTCAGTCTACAATGGTGTGTCATTCCTATAAGATGTaGTCATGCAATAGTAGGCCAAAACTTGTGGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LQSTMVCHSYKM*SCNSRPKLVGV Trigger: TACTCCCACAAGTTTTGGCCTACTATTGCATGAGCACATCTTATAGGAATGACACACCATTGTAGACTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAATTTATGGTTCTGGAAGGAAACTTGCATACTACCAAAGGAGAAAGGTCACAGAGGATGGCTTACTaGGTCATTAATGAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SEFMVLEGNLHTTKGERSQRMAY*VINERK Trigger: TTTCCTCTCATTAATGACCAAGTAAGCCATCCTCTG...TGACCTTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCGAAAGAAATGTTAGTTaGGATGGGGTAGGAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIERNVS*DGVGGE Trigger: CTCACCTCCTACCCCATCCAAACTAACATTTCTTTC...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCGTGAAGAGAGGCCCCTaGGTCTTGCAAACTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIVKRGP*VLQTLY Trigger: ATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCAC...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR CCA 72 bp | TTCAATATAATTGAGTTGTTGATTAAATGGGGTCTATaGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FNIIELLIKWGL*EPPNSPKYCQG Trigger: GCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAACTCAATTATATTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCGAAAGAAATGTTAGTTaGGATGGGGTAGGAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLKHEIHEIETISSTVSIERNVS*DGVGGE Trigger: CTCACCTCCTACCCCATCCAAACTAACATTTCTTTC...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR CCA 72 bp | CACATAGTGAGAGACATTAAGACAGTCAACCCTGTATaGAAAGTCTCCATAAAATTCTTCTTTAAGGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HIVRDIKTVNPV*KVSIKFFFKEH Trigger: GTGCTCCTTAAAGAAGAATTTTATGGAGACTTTCCATACAGGGTTGACTGTCTTAATGTCTCTCACTATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCCAGAGGATGGCTTACTaGGTCATTAATGAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLKHEIHEIETISSTVSIQRMAY*VINERK Trigger: TTTCCTCTCATTAATGACCAAGTAAGCCATCCTCTG...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR TCA 72 bp | GCCCAAAGTATTGTCAAGGCATTAAAGCCATATTCCTaGATACAGCAATTGCACAACTCATTGAATATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: AQSIVKALKPYS*IQQLHNSLNMV Trigger: TACCATATTCAATGAGTTGTGCAATTGCTGTATTCAGGAATATGGCTTTAATGCCTTGACAATACTTTGGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATCTGATTGTGACAGCCTaGACCACACTCAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PELMSLAAYVAEEGLVGHLIVTA*TTLRRQ Trigger: CTGCCTCCTGAGTGTGGTCCAGGCTGTCACAATCAG...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| 3UTR CAA 72 bp | CAAACACAGAAGTGGATGATCACAGTCAGCTATTGGTaGGAACACAGGGCCCCCAATGAAGGAGCTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTQKWMITVSYW*EHRAPNEGARE Trigger: TTCTCTAGCTCCTTCATTGGGGGCCCTGTGTTCCAACCAATAGCTGACTGTGATCATCCACTTCTGTGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCCTGATTGTGACAGCCTaGACCACACTCAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKNEFMKFLGKWMNLEGILIVTA*TTLRRQ Trigger: CTGCCTCCTGAGTGTGGTCCAGGCTGTCACAATCAG...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR TCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGATGCTTGCATTGCCTCTaGTGCCTGAACAAAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: IHPIIRLQMLTPLHMPARCLHCL*CLNKIF Trigger: GAATATTTTGTTCAGGCATCAGAGGCAATGCAAGCA...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAATTCTGGCGGTGCTTTaGCTGCATGTTTTCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQILAVL*LHVFQH Trigger: ATGTTGGAAAACATGCAGTCAAAGCACCGCCAGAAT...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATAAAGTAGAAACATATTaGCTAAAACTCCAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PELMSLAAYVAEEGLVGHKVETY*LKLQVQ Trigger: CTGGACTTGGAGTTTTAGCCAATATGTTTCTACTTT...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR TCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATTTTTCAGTCTTGGTTTaGATTTTGCCAACAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYGNPQTAQSIVKALKPYFSVLV*ILPTVR Trigger: CCTCACTGTTGGCAAAATTCAAACCAAGACTGAAAA...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAATTTATGGTTCTGGAAGGAAACTTGCATACTACCAAAGGAGAAAGGTCAAGTCCACCCAGTACATaGCCACAAAGAAGACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SEFMVLEGNLHTTKGERSSPPST*PQRRPQ Trigger: TTGTGGTCTTCTTTGTGGTCATGTACTGGGTGGACT...TGACCTTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR GCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATTGGCGGTGCTTTGACTaGATGTTTTCCAACATAATT | + |
|
Preference number: 4 (lower is better) Translates to: VYGNPQTAQSIVKALKPYWRCFD*MFSNII Trigger: AATTATGTTGGAAAACATGCAGTCAAAGCACCGCCA...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAATTTTCAGTCTTGGTTTaGATTTTGCCAACAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQFSVLV*ILPTVR Trigger: CCTCACTGTTGGCAAAATTCAAACCAAGACTGAAAA...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGAACTATAAGGAACGGCAGAAGGAGAAACACTAAACACTTTATAGTATATAGTCCACCCAGTACATaGCCACAAAGAAGACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GGTIRNGRRRNTKHFIVYSPPST*PQRRPQ Trigger: TTGTGGTCTTCTTTGTGGTCATGTACTGGGTGGACT...ATATACTATAAAGTGTTTAGTGTTTCTCCTTCTGCCGTTCCTTATAGTTCCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAATGGCGGTGCTTTGACTaGATGTTTTCCAACATAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQWRCFD*MFSNII Trigger: AATTATGTTGGAAAACATGCAGTCAAAGCACCGCCA...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR TCA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCATTCTGGCGGTGCTTTaGCTGCATGTTTTCCAACAT | + |
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Preference number: 4 (lower is better) Translates to: KKNEFMKFLGKWMNLEGIILAVL*LHVFQH Trigger: ATGTTGGAAAACATGCAGTCAAAGCACCGCCAGAAT...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CCA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAAAAGTAGAAACATATTaGCTAAAACTCCAAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IHPIIRLQMLTPLHMPARKVETY*LKLQVQ Trigger: CTGGACTTGGAGTTTTAGCCAATATGTTTCTACTTT...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CCA 90 bp | GTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAGGCATTAAAGCCATATAAAGTAGAAACATATTaGCTAAAACTCCAAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VYGNPQTAQSIVKALKPYKVETY*LKLQVQ Trigger: CTGGACTTGGAGTTTTAGCCAATATGTTTCTACTTT...ATATGGCTTTAATGCCTTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR TCA 90 bp | GGAGGAACTATAAGGAACGGCAGAAGGAGAAACACTAAACACTTTATAGTATATTGCTTGCATTGCCTCTaGTGCCTGAACAAAATATTC | + |
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Preference number: 4 (lower is better) Translates to: GGTIRNGRRRNTKHFIVYCLHCL*CLNKIF Trigger: GAATATTTTGTTCAGGCATCAGAGGCAATGCAAGCA...ATATACTATAAAGTGTTTAGTGTTTCTCCTTCTGCCGTTCCTTATAGTTCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR TCA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCATTCTGGCGGTGCTTTaGCTGCATGTTTTCCAACAT | + |
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Preference number: 4 (lower is better) Translates to: SLKHEIHEIETISSTVSIILAVL*LHVFQH Trigger: ATGTTGGAAAACATGCAGTCAAAGCACCGCCAGAAT...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| 3UTR CAA 72 bp | TTCAGTACTGATAATCAGTTCAATATAATTGAGTTGTaGATTAAATGGGGTCTATGGGAACCCCCAAACAGC | + |
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Preference number: 4 (lower is better) Translates to: FSTDNQFNIIEL*IKWGLWEPPNS Trigger: GCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAACTCAATTATATTGAACTGATTATCAGTACTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR TCA 90 bp | AGTTTAAAGCATGAAATCCATGAGATTGAAACCATATCCAGCACTGTAAGTATCTTTTCAGTCTTGGTTTaGATTTTGCCAACAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLKHEIHEIETISSTVSIFSVLV*ILPTVR Trigger: CCTCACTGTTGGCAAAATTCAAACCAAGACTGAAAA...GATACTTACAGTGCTGGATATGGTTTCAATCTCATGGATTTCATGCTTTAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | GTGAATACTTCTAATCCCAGAATGGGAGAGGTGGAAACTGGAAGAGCCATGATAGTGAACGAAGGTCAGTaGACAGGAGATCAGGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: VNTSNPRMGEVETGRAMIVNEGQ*TGDQVC Trigger: ACAGACCTGATCTCCTGTCAACTGACCTTCGTTCAC...TATCATGGCTCTTCCAGTTTCCACCTCTCCCATTCTGGGATTAGAAGTATTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | CAAGTGAGGAACAACAGCCAAAGTTGTCTCCTGGCCTCCATGTGCACATATACAGTGACCTTCATCTGGTaGGTTTCACTTAAGTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: QVRNNSQSCLLASMCTYTVTFIW*VSLKLV Trigger: TACCAACTTAAGTGAAACCAACCAGATGAAGGTCAC...TGTATATGTGCACATGGAGGCCAGGAGACAACTTTGGCTGTTGTTCCTCACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGCTCATGTCTCTTGCTGCATATGTAGCAGAAGAAGGCCTAGTTGGCCATATTTTCAGTCTTGGTTaGAATTTTGCCAACAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: PELMSLAAYVAEEGLVGHIFSLG*NFANSE Trigger: CTCACTGTTGGCAAAATTCAAACCAAGACTGAAAAT...ATGGCCAACTAGGCCTTCTTCTGCTACATATGCAGCAAGAGACATGAGCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAAATTCTGGCGGTGCTTaGACTGCATGTTTTCCAACA | + |
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Preference number: 5 (lower is better) Translates to: IHPIIRLQMLTPLHMPARNSGGA*TACFPT Trigger: TGTTGGAAAACATGCAGTCAAAGCACCGCCAGAATT...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAGTGACCTTCATCTGGTaGGTTTCACTTAAGTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: IHPIIRLQMLTPLHMPARVTFIW*VSLKLV Trigger: TACCAACTTAAGTGAAACCAACCAGATGAAGGTCAC...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | GTGAATACTTCTAATCCCAGAATGGGAGAGGTGGAAACTGGAAGAGCCATGATAAACTCCAAGTCCAGCTaGGAAATAAAGAACATTCTT | + |
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Preference number: 5 (lower is better) Translates to: VNTSNPRMGEVETGRAMINSKSS*EIKNIL Trigger: AAGAATGTTCTTTATTTCCAAGCTGGACTTGGAGTT...TATCATGGCTCTTCCAGTTTCCACCTCTCCCATTCTGGGATTAGAAGTATTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | ATCCATCCCATAATCAGACTCCAAATGCTGACACCATTGCATATGCCAGCAAGAATTTTCAGTCTTGGTTaGAATTTTGCCAACAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: IHPIIRLQMLTPLHMPARIFSLG*NFANSE Trigger: CTCACTGTTGGCAAAATTCAAACCAAGACTGAAAAT...TCTTGCTGGCATATGCAATGGTGTCAGCATTTGGAGTCTGATTATGGGATGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | TTGTTGATTAAATGGGGTCTATGGGAACCCCCAAACAGCCCAAAGTATTGTCAAAACTCCAAGTCCAGCTaGGAAATAAAGAACATTCTT | + |
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Preference number: 5 (lower is better) Translates to: LLIKWGLWEPPNSPKYCQNSKSS*EIKNIL Trigger: AAGAATGTTCTTTATTTCCAAGCTGGACTTGGAGTT...TTGACAATACTTTGGGCTGTTTGGGGGTTCCCATAGACCCCATTTAATCAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | GGAGGAACTATAAGGAACGGCAGAAGGAGAAACACTAAACACTTTATAGTATATAATTCTGGCGGTGCTTaGACTGCATGTTTTCCAACA | + |
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Preference number: 5 (lower is better) Translates to: GGTIRNGRRRNTKHFIVYNSGGA*TACFPT Trigger: TGTTGGAAAACATGCAGTCAAAGCACCGCCAGAATT...ATATACTATAAAGTGTTTAGTGTTTCTCCTTCTGCCGTTCCTTATAGTTCCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | GGAGGAACTATAAGGAACGGCAGAAGGAGAAACACTAAACACTTTATAGTATATGTGACCTTCATCTGGTaGGTTTCACTTAAGTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: GGTIRNGRRRNTKHFIVYVTFIW*VSLKLV Trigger: TACCAACTTAAGTGAAACCAACCAGATGAAGGTCAC...ATATACTATAAAGTGTTTAGTGTTTCTCCTTCTGCCGTTCCTTATAGTTCCTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | TCAGAATTTATGGTTCTGGAAGGAAACTTGCATACTACCAAAGGAGAAAGGTCAATTTTCAGTCTTGGTTaGAATTTTGCCAACAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SEFMVLEGNLHTTKGERSIFSLG*NFANSE Trigger: CTCACTGTTGGCAAAATTCAAACCAAGACTGAAAAT...TGACCTTTCTCCTTTGGTAGTATGCAAGTTTCCTTCCAGAACCATAAATTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGAACCTGGAGGGCATCAACTCCAAGTCCAGCTaGGAAATAAAGAACATTCTT | + |
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Preference number: 5 (lower is better) Translates to: KKNEFMKFLGKWMNLEGINSKSS*EIKNIL Trigger: AAGAATGTTCTTTATTTCCAAGCTGGACTTGGAGTT...GATGCCCTCCAGGTTCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS-3UTR CAA 90 bp | GGAGGAACTATAAGGAACGGCAGAAGGAGAAACACTAAACACTTTATAGTATATAACTCCAAGTCCAGCTaGGAAATAAAGAACATTCTT | + |
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Preference number: 5 (lower is better) Translates to: GGTIRNGRRRNTKHFIVYNSKSS*EIKNIL Trigger: AAGAATGTTCTTTATTTCCAAGCTGGACTTGGAGTT...ATATACTATAAAGTGTTTAGTGTTTCTCCTTCTGCCGTTCCTTATAGTTCCTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS CAA 72 bp | TCCAGCAAGGAACATCATTATGTGAACGAAGGTCAGTaGACAGGAGATCAGGTCTGTGGGTTTAGGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSKEHHYVNEGQ*TGDQVCGFRSV Trigger: CACAGACCTAAACCCACAGACCTGATCTCCTGTCAACTGACCTTCGTTCACATAATGATGTTCCTTGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000168416.2 ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS CCA 72 bp | TTTGGTAAGAGTGTACAGGATTTAGTGACCTTCATCTaGTTGGTTTCACTTAAGTTGGTAAAACCACCAACA | + |
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Preference number: 6 (lower is better) Translates to: FGKSVQDLVTFI*LVSLKLVKPPT Trigger: TGTTGGTGGTTTTACCAACTTAAGTGAAACCAACCAGATGAAGGTCACTAAATCCTGTACACTCTTACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000168416.2 ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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| CDS CAA 72 bp | GGTAAGAGTGTACAGGATTTAGTGACCTTCATCTGGTaGGTTTCACTTAAGTTGGTAAAACCACCAACATAT | + |
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Preference number: 6 (lower is better) Translates to: GKSVQDLVTFIW*VSLKLVKPPTY Trigger: ATATGTTGGTGGTTTTACCAACTTAAGTGAAACCAACCAGATGAAGGTCACTAAATCCTGTACACTCTTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000168416.2 ENSMUST00000226971.2 ENSMUST00000227761.2 ENSMUST00000228038.2 ENSMUST00000228909.2 |
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