Pregenerated sensors for VMN1R26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048697Ensembl transcript IDs: ENSMUST00000049694.4, ENSMUST00000228040.2, ENSMUST00000228070.2, ENSMUST00000228951.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR GCA 90 bp | CTTTGTACACCAGTCTGGCCTCAAACTCAGAAATCCACCTGTCTCTaGCTTCCAAGTGCTGGGATTAAAGGTGTGCACCAACACTGCCCG | + |
Preference number: 1 (lower is better) Translates to: LCTPVWPQTQKSTCL*LPSAGIKGVHQHCP Trigger: CGGGCAGTGTTGGTGCACACCTTTAATCCCAGCACTTGGAAGGCAGAGACAGGTGGATTTCTGAGTTTGAGGCCAGACTGGTGTACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 90 bp | ACCACCCACTCCCGCTTCTTGGCCCTAGCATTCTCCTATAAAGTTTaGAATACAGGGTTTCTCTGTAGAGCCCTGGCTGTCCTGGAACTC | + |
Preference number: 1 (lower is better) Translates to: TTHSRFLALAFSYKV*NTGFLCRALAVLEL Trigger: GAGTTCCAGGACAGCCAGGGCTCTACAGAGAAACCCTGTATTGCAAACTTTATAGGAGAATGCTAGGGCCAAGAAGCGGGAGTGGGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 90 bp | AATAGTGTCTGTGTTTGGTGGTTGTTTATGGGATGGATCCCCAGATaGGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTGCTCCACAC | + |
Preference number: 1 (lower is better) Translates to: NSVCVWWLFMGWIPR*DSLWIVIPSVFAPH Trigger: GTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACCACCAAACACAGACACTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 90 bp | GATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTaGTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTT | + |
Preference number: 1 (lower is better) Translates to: DPQMGQSLDRHSFSL*STLCPCKSFHGYFV Trigger: AACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 90 bp | TGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGGATaGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTCAGTC | + |
Preference number: 1 (lower is better) Translates to: CNICNSVCVWWLFMG*IPRWDSLWIVIPSV Trigger: GACTGAAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 90 bp | GTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATaGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTT | + |
Preference number: 1 (lower is better) Translates to: VSAISAIVSVFGGCL*DGSPDGTVSGSSFL Trigger: AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 90 bp | AACCTGTCTGTCACTGTACCACTACCATGCTGTTATTATCACAATTaGTCTGTAGTACAGCTTGAGGTTGGTGATGGTGATTCCACCAGA | + |
Preference number: 1 (lower is better) Translates to: NLSVTVPLPCCYYHN*SVVQLEVGDGDSTR Trigger: TCTGGTGGAATCACCATCACCAACCTCAAGCTGTACTACAGAGCAATTGTGATAATAACAGCATGGTAGTGGTACAGTGACAGACAGGTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR TCA 90 bp | CTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTTaGTCTTACAGCCCAAGCCATTGCTGTTATGTTCAGGAATTCCCC | + |
Preference number: 1 (lower is better) Translates to: LTEALQFYEVPFVDS*SYSPSHCCYVQEFP Trigger: GGGGAATTCCTGAACATAACAGCAATGGCTTGGGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR TCA 90 bp | ATTGCTGATAGTGCTATGTCCAAATTTTCTGAGGAAATGCCAGATTaGTGTCCAGAGTGTTTGTACCAGATTGCAATCCCACCAATAATG | + |
Preference number: 1 (lower is better) Translates to: IADSAMSKFSEEMPD*CPECLYQIAIPPIM Trigger: CATTATTGGTGGGATTGCAATCTGGTACAAACACTCTGGACATCAATCTGGCATTTCCTCAGAAAATTTGGACATAGCACTATCAGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 90 bp | TGCCATTTTGTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTaGAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCC | + |
Preference number: 1 (lower is better) Translates to: CHFVLLTVSFALQKL*NFMRSHLSILDLTA Trigger: GGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAGGACACTGTCAATAAGACAAAATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 90 bp | TGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGGATTaGAGTATCCACACTTTGGTCTTCCTTCTTGACTTTCATGTGTTT | + |
Preference number: 1 (lower is better) Translates to: CKSFHGYFVPPSKKD*SIHTLVFLLDFHVF Trigger: AAACACATGAAAGTCAAGAAGGAAGACCAAAGTGTGGATACTCCAATCCTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 90 bp | CCCTCTATCAGATTTAGGATTGGTAAAGAGCATTTCACATTCTGTTaGTTGCCATTTTGTCTTATTGACAGTGTCCTTTGCCTTACAGAA | + |
Preference number: 1 (lower is better) Translates to: PSIRFRIGKEHFTFC*LPFCLIDSVLCLTE Trigger: TTCTGTAAGGCAAAGGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTACCAATCCTAAATCTGATAGAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 90 bp | AATTATATTACATTGATCAACCTGTCTGTCACTGTACCACTACCATaGTGTTATTATCACAATTGCTCTGTAGTACAGCTTGAGGTTGGT | + |
Preference number: 1 (lower is better) Translates to: NYITLINLSVTVPLP*CYYHNCSVVQLEVG Trigger: ACCAACCTCAAGCTGTACTACAGAGCAATTGTGATAATAACAGCATGGTAGTGGTACAGTGACAGACAGGTTGATCAATGTAATATAATT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 90 bp | CTATCAGATTTAGGATTGGTAAAGAGCATTTCACATTCTGTTGGTTaGCATTTTGTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTT | + |
Preference number: 1 (lower is better) Translates to: LSDLGLVKSISHSVG*HFVLLTVSFALQKL Trigger: AAGCTTCTGTAAGGCAAAGGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTACCAATCCTAAATCTGATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 90 bp | TCCTTTGTCAAAGATCAAGTGAGCATAGGTGTGTCAATTCATTTCTaGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTA | + |
Preference number: 1 (lower is better) Translates to: SFVKDQVSIGVSIHF*VFNYITLINLSVTV Trigger: TACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATGAATTGACACACCTATGCTCACTTGATCTTTGACAAAGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGGTATTGAACCATACCTaGATCCCTGGGAAGAAGCCA | + |
Preference number: 2 (lower is better) Translates to: RHSSILGHRTFTGPLLPLVLNHT*IPGKKP Trigger: TGGCTTCTTCCCAGGGATGCAGGTATGGTTCAATAC...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 90 bp | GGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTCAGTCTTaGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGT | + |
Preference number: 2 (lower is better) Translates to: GSPDGTVSGSSFLQS*LHTLSLQILPWIFC Trigger: ACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGTGCAGAATGTATCTTTaGTATTCTGAGCTTCTGGGC | + |
Preference number: 2 (lower is better) Translates to: RHSSILGHRTFTGPLLPLCRMYL*YSELLG Trigger: GCCCAGAAGCTCAGAATACCAAAGATACATTCTGCA...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGAGTGTCTGTGTTTGGTaGTTGTTTATGGGATGGATC | + |
Preference number: 2 (lower is better) Translates to: RHSSILGHRTFTGPLLPLSVCVW*LFMGWI Trigger: GATCCATCCCATAAACAACCACCAAACACAGACACT...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 90 bp | TCATATTGTTGTTTCTCCTATGGTGTTGCAAATCCCTTCAGCTCCTaGGGTACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGTTCCGT | + |
Preference number: 2 (lower is better) Translates to: SYCCFSYGVANPFSS*GTFSSSFIGDPVFR Trigger: ACGGAACACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGATTTGCAACACCATAGGAGAAACAACAATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | GGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCTGGGCCCAGAATTCCTaGTTTTCTAAGACTTTTATC | + |
Preference number: 2 (lower is better) Translates to: GQSLDRHSFSLCSTLCPCWAQNS*FSKTFI Trigger: GATAAAAGTCTTAGAAAATCAGGAATTCTGGGCCCA...GCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTAACTCTGTGAGGAATTaGGTTGGAATTTTGATGGGG | + |
Preference number: 2 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLNSVRN*VGILMG Trigger: CCCCATCAAAATTCCAACTCAATTCCTCACAGAGTT...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGTTTGGTCTTCCTTCTTaGCTTTCATGTGTTTTGCAG | + |
Preference number: 2 (lower is better) Translates to: RHSSILGHRTFTGPLLPLFGLPS*LSCVLQ Trigger: CTGCAAAACACATGAAAGTCAAGAAGGAAGACCAAA...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTTACAGCCCAAGCCATTaGTGTTATGTTCAGGAATTC | + |
Preference number: 2 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLYSPSH*CYVQEF Trigger: GAATTCCTGAACATAACAGCAATGGCTTGGGCTGTA...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTTCCACACTTTGTCCCTaGAAATCCTTCCATGGATAT | + |
Preference number: 2 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLSTLCP*KSFHGY Trigger: ATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGA...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTGGAGTATCCACACTTTaGTCTTCCTTCTTGACTTTC | + |
Preference number: 2 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLGVSTL*SSFLTF Trigger: GAAAGTCAAGAAGGAAGACCAAAGTGTGGATACTCC...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGTGTGTTTTCTTTTATTaGTGGTTTAGTCCCAGAGAG | + |
Preference number: 2 (lower is better) Translates to: RHSSILGHRTFTGPLLPLCVFFY*WFSPRE Trigger: CTCTCTGGGACTAAACCATCAATAAAAGAAAACACA...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTTTCTTTTGGAACAGATaGTGTGTTCTACTCACCAGT | + |
Preference number: 2 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLFFWNR*CVLLTS Trigger: ACTGGTGAGTAGAACACAGCATCTGTTCCAAAAGAA...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | GGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAGGGTTGTTTTGATTTaGATTTCCCTGATGACTAAG | + |
Preference number: 2 (lower is better) Translates to: GQSLDRHSFSLCSTLCPCRVVLI*ISLMTK Trigger: CTTAGTCATCAGGGAAATGCAAATCAAAACAACCCT...GCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGCCATACCTGCATCCCTaGGAAGAAGCCAACTTGATC | + |
Preference number: 2 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKPYLHP*EEANLI Trigger: GATCAAGTTGGCTTCTTCCCAGGGATGCAGGTATGG...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGCATTTAGTTTGGTGTTaGGTACTGGTTTGCTGTATA | + |
Preference number: 2 (lower is better) Translates to: RHSSILGHRTFTGPLLPLHLVWC*VLVCCI Trigger: TATACAGCAAACCAGTACCCAACACCAAACTAAATG...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCTTAGGAGTTCTCTGGTaGAATAATTGTGGTCACTTA | + |
Preference number: 2 (lower is better) Translates to: GQSLDRHSFSLCSTLCPCLGVLW*NNCGHL Trigger: TAAGTGACCACAATTATTCCACCAGAGAACTCCTAA...GCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGCCATTCAGAATGGTGTaGGGTAGAATCCCAGGGTTG | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWPFRMV*GRIPGL Trigger: CAACCCTGGGATTCTACCTCACACCATTCTGAATGG...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGCCATACCTGCATCCCTaGGAAGAAGCCAACTTGATC | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWPYLHP*EEANLI Trigger: GATCAAGTTGGCTTCTTCCCAGGGATGCAGGTATGG...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGTTTGGTGTTGGGTACTaGTTTGCTGTATATTTCTTT | + |
Preference number: 2 (lower is better) Translates to: RHSSILGHRTFTGPLLPLFGVGY*FAVYFF Trigger: AAAGAAATATACAGCAAACCAGTACCCAACACCAAA...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTTTAGGAGTTCTCTGGTaGAATAATTGTGGTCACTTA | + |
Preference number: 2 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLLGVLW*NNCGHL Trigger: TAAGTGACCACAATTATTCCACCAGAGAACTCCTAA...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTGGGTTAGGAGTTCTCTaGTGGAATAATTGTGGTCAC | + |
Preference number: 2 (lower is better) Translates to: FLQSLLHTLSLQILPWIFGLGVL*WNNCGH Trigger: GTGACCACAATTATTCCACCAGAGAACTCCTAACCC...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGCTGTTGAGGGACATCTaGGTTCTTTCCACCTTCTTG | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWLLRDI*VLSTFL Trigger: CAAGAAGGTGGAAAGAACCCAGATGTCCCTCAACAG...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 90 bp | ATCTGGGGTTACTTGTTAGTTCATATTGTTGTTTCTCCTATGGTGTaGCAAATCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCA | + |
Preference number: 2 (lower is better) Translates to: IWGYLLVHIVVSPMV*QIPSAPWVLSLAPS Trigger: TGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGATTTGCAACACCATAGGAGAAACAACAATATGAACTAACAAGTAACCCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGGCCATTTTGTCTTATTaGCAGTGTCCTTTGCCTTAC | + |
Preference number: 2 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKAILSY*QCPLPY Trigger: GTAAGGCAAAGGACACTGTCAATAAGACAAAATGGC...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GCTATGAACATAGTGGAGCATTTTTCCTTATTACAAGTTGGAACATATTCTGGGCCATACCTGCATCCCTaGGAAGAAGCCAACTTGATC | + |
Preference number: 2 (lower is better) Translates to: AMNIVEHFSLLQVGTYSGPYLHP*EEANLI Trigger: GATCAAGTTGGCTTCTTCCCAGGGATGCAGGTATGG...CCCAGAATATGTTCCAACTTGTAATAAGGAAAAATGCTCCACTATGTTCATAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGTCTCTCCATTTAGTTTaGTGTTGGGTACTGGTTTGC | + |
Preference number: 2 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKSLHLV*CWVLVC Trigger: GCAAACCAGTACCCAACACCAAACTAAATGGAGAGA...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 90 bp | CCCCTTCTAAGAAGGATTGGAGTATCCACACTTTGGTCTTCCTTCTaGACTTTCATGTGTTTTGCAGAATGTATCTTTGGTATTCTGAGC | + |
Preference number: 2 (lower is better) Translates to: PLLRRIGVSTLWSSF*TFMCFAECIFGILS Trigger: GCTCAGAATACCAAAGATACATTCTGCAAAACACATGAAAGTCAAGAAGGAAGACCAAAGTGTGGATACTCCAATCCTTCTTAGAAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACGCCAGCACCATTTTATaGGAATGCTCTCTTCTTCTC | + |
Preference number: 2 (lower is better) Translates to: LSSISFSVSGFMWSSLIYASTIL*ECSLLL Trigger: GAGAAGAAGAGAGCATTCTCATAAAATGGTGCTGGC...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | GTAAAGAGCATTTCACATTCTGTTGGTTGCCATTTTGTCTTATTGACAGTGTCCGCCAGCACCATTTTATaGGAATGCTCTCTTCTTCTC | + |
Preference number: 2 (lower is better) Translates to: VKSISHSVGCHFVLLTVSASTIL*ECSLLL Trigger: GAGAAGAAGAGAGCATTCTCATAAAATGGTGCTGGC...GGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | ACTTTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCGCCAGCACCATTTTATaGGAATGCTCTCTTCTTCTC | + |
Preference number: 2 (lower is better) Translates to: TLSSISFSVSGFMWSSLIASTIL*ECSLLL Trigger: GAGAAGAAGAGAGCATTCTCATAAAATGGTGCTGGC...GATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGAGCTTTGCAATTTTATaGGGTCCCATTTGTCGATTC | + |
Preference number: 2 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKSFAIL*GPICRF Trigger: GAATCGACAAATGGGACCTCATAAAATTGCAAAGCT...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTTTGGTCTTCCTTCTTaGCTTTCATGTGTTTTGCAG | + |
Preference number: 2 (lower is better) Translates to: FLQSLLHTLSLQILPWIFFGLPS*LSCVLQ Trigger: CTGCAAAACACATGAAAGTCAAGAAGGAAGACCAAA...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | CATTTCTGGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTACCAGTATTGAACCATACCTaGATCCCTGGGAAGAAGCCA | + |
Preference number: 2 (lower is better) Translates to: HFWVFNYITLINLSVTVPVLNHT*IPGKKP Trigger: TGGCTTCTTCCCAGGGATGCAGGTATGGTTCAATAC...TGGTACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTGCCTTACAGAAGCTTTaGAATTTTATGAGGTCCCAT | + |
Preference number: 2 (lower is better) Translates to: FLQSLLHTLSLQILPWIFALQKL*NFMRSH Trigger: ATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGC...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACGGGTTAGGAGTTCTCTaGTGGAATAATTGTGGTCAC | + |
Preference number: 2 (lower is better) Translates to: LSSISFSVSGFMWSSLIYGLGVL*WNNCGH Trigger: GTGACCACAATTATTCCACCAGAGAACTCCTAACCC...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGGGAGTATCCACACTTTaGTCTTCCTTCTTGACTTTC | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWGVSTL*SSFLTF Trigger: GAAAGTCAAGAAGGAAGACCAAAGTGTGGATACTCC...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTCTGCTTGTAATGAGATaGTCATGTGGTTTTTGTCTT | + |
Preference number: 2 (lower is better) Translates to: FLQSLLHTLSLQILPWIFLLVMR*SCGFCL Trigger: AAGACAAAAACCACATGATCATCTCATTACAAGCAG...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGTGGGCCCAGAATTCCTaGTTTTCTAAGACTTTTATC | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWWAQNS*FSKTFI Trigger: GATAAAAGTCTTAGAAAATCAGGAATTCTGGGCCCA...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGTATGTCCAAATTTTCTaGGGAAATGCCAGATTGATG | + |
Preference number: 2 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKYVQIF*GNARLM Trigger: CATCAATCTGGCATTTCCTCAGAAAATTTGGACATA...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTACTGTACCACTACCATaGTGTTATTATCACAATTGC | + |
Preference number: 2 (lower is better) Translates to: FLQSLLHTLSLQILPWIFTVPLP*CYYHNC Trigger: GCAATTGTGATAATAACAGCATGGTAGTGGTACAGT...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGACTGTACCACTACCATaGTGTTATTATCACAATTGC | + |
Preference number: 2 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKTVPLP*CYYHNC Trigger: GCAATTGTGATAATAACAGCATGGTAGTGGTACAGT...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGGCCTTACAGAAGCTTTaGAATTTTATGAGGTCCCAT | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWALQKL*NFMRSH Trigger: ATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGC...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GTTAACAGCCAGTTGAGCCAGCACCATTTTATGAGAATGCTCTCTTCTTCTCCATTTGGTGTTGGGTACTaGTTTGCTGTATATTTCTTT | + |
Preference number: 2 (lower is better) Translates to: VNSQLSQHHFMRMLSSSPFGVGY*FAVYFF Trigger: AAAGAAATATACAGCAAACCAGTACCCAACACCAAA...TGGAGAAGAAGAGAGCATTCTCATAAAATGGTGCTGGCTCAACTGGCTGTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTCATTTAGTTTGGTGTTaGGTACTGGTTTGCTGTATA | + |
Preference number: 2 (lower is better) Translates to: FLQSLLHTLSLQILPWIFHLVWC*VLVCCI Trigger: TATACAGCAAACCAGTACCCAACACCAAACTAAATG...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | ACTTTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTGTGAGGAATTGAGTTaGAATTTTGATGGGGGTTGC | + |
Preference number: 2 (lower is better) Translates to: TLSSISFSVSGFMWSSLICEELS*NFDGGC Trigger: GCAACCCCCATCAAAATTCCAACTCAATTCCTCACA...GATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACTGTGAGGAATTGAGTTaGAATTTTGATGGGGGTTGC | + |
Preference number: 2 (lower is better) Translates to: LSSISFSVSGFMWSSLIYCEELS*NFDGGC Trigger: GCAACCCCCATCAAAATTCCAACTCAATTCCTCACA...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGCTTCAAGTACTATATTaGATAGGTAGGGAGAAAGTG | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWLQVLY*IGREKV Trigger: CACTTTCTCCCTACCTATTCAATATAGTACTTGAAG...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | GCTATGAACATAGTGGAGCATTTTTCCTTATTACAAGTTGGAACATATTCTGGGAACTCTGTGAGGAATTaGGTTGGAATTTTGATGGGG | + |
Preference number: 2 (lower is better) Translates to: AMNIVEHFSLLQVGTYSGNSVRN*VGILMG Trigger: CCCCATCAAAATTCCAACTCAATTCCTCACAGAGTT...CCCAGAATATGTTCCAACTTGTAATAAGGAAAAATGCTCCACTATGTTCATAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | GTAAAGAGCATTTCACATTCTGTTGGTTGCCATTTTGTCTTATTGACAGTGTCCAGCTTTGCAATTTTATaGGGTCCCATTTGTCGATTC | + |
Preference number: 2 (lower is better) Translates to: VKSISHSVGCHFVLLTVSSFAIL*GPICRF Trigger: GAATCGACAAATGGGACCTCATAAAATTGCAAAGCT...GGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | ACTTTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTTCTTTTGGAACAGATaGTGTGTTCTACTCACCAGT | + |
Preference number: 2 (lower is better) Translates to: TLSSISFSVSGFMWSSLIFFWNR*CVLLTS Trigger: ACTGGTGAGTAGAACACAGCATCTGTTCCAAAAGAA...GATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACTTCTTTTGGAACAGATaGTGTGTTCTACTCACCAGT | + |
Preference number: 2 (lower is better) Translates to: LSSISFSVSGFMWSSLIYFFWNR*CVLLTS Trigger: ACTGGTGAGTAGAACACAGCATCTGTTCCAAAAGAA...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTAGGGTTGTTTTGATTTaGATTTCCCTGATGACTAAG | + |
Preference number: 2 (lower is better) Translates to: CKCTTFSVSIPLLRDIWVRVVLI*ISLMTK Trigger: CTTAGTCATCAGGGAAATGCAAATCAAAACAACCCT...AACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGCATTTAGTTTGGTGTTaGGTACTGGTTTGCTGTATA | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWHLVWC*VLVCCI Trigger: TATACAGCAAACCAGTACCCAACACCAAACTAAATG...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | CATTTCTGGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTACCATCTCTCCATTTAGTTTaGTGTTGGGTACTGGTTTGC | + |
Preference number: 2 (lower is better) Translates to: HFWVFNYITLINLSVTVPSLHLV*CWVLVC Trigger: GCAAACCAGTACCCAACACCAAACTAAATGGAGAGA...TGGTACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GCTATGAACATAGTGGAGCATTTTTCCTTATTACAAGTTGGAACATATTCTGGGTCTCTCCATTTAGTTTaGTGTTGGGTACTGGTTTGC | + |
Preference number: 2 (lower is better) Translates to: AMNIVEHFSLLQVGTYSGSLHLV*CWVLVC Trigger: GCAAACCAGTACCCAACACCAAACTAAATGGAGAGA...CCCAGAATATGTTCCAACTTGTAATAAGGAAAAATGCTCCACTATGTTCATAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGTTAGGAGTTCTCTGGTaGAATAATTGTGGTCACTTA | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWLGVLW*NNCGHL Trigger: TAAGTGACCACAATTATTCCACCAGAGAACTCCTAA...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GCTATGAACATAGTGGAGCATTTTTCCTTATTACAAGTTGGAACATATTCTGGGTGTGAGGAATTGAGTTaGAATTTTGATGGGGGTTGC | + |
Preference number: 2 (lower is better) Translates to: AMNIVEHFSLLQVGTYSGCEELS*NFDGGC Trigger: GCAACCCCCATCAAAATTCCAACTCAATTCCTCACA...CCCAGAATATGTTCCAACTTGTAATAAGGAAAAATGCTCCACTATGTTCATAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGGTCTCTGGTTTTATGTaGAGTTCCTTGATCTACTTA | + |
Preference number: 2 (lower is better) Translates to: ALVSAISAIVSVFGGCLWVSGFM*SSLIYL Trigger: TAAGTAGATCAAGGAACTCCACATAAAACCAGAGAC...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTaGATCTACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGA | + |
Preference number: 2 (lower is better) Translates to: LSSISFSVSGFMWSS*IYLDLSFVQGDKNG Trigger: TCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 90 bp | TCTATCAGATTTAGGATTGGTAAAGAGCATTTCACATTCTGTTGGTaGCCATTTTGTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCT | + |
Preference number: 2 (lower is better) Translates to: SIRFRIGKEHFTFCW*PFCLIDSVLCLTEA Trigger: AGCTTCTGTAAGGCAAAGGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTACCAATCCTAAATCTGATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR TCA 90 bp | GTAAAGAGCATTTCACATTCTGTTGGTTGCCATTTTGTCTTATTGACAGTGTCCCTGCTTGTAATGAGATaGTCATGTGGTTTTTGTCTT | + |
Preference number: 2 (lower is better) Translates to: VKSISHSVGCHFVLLTVSLLVMR*SCGFCL Trigger: AAGACAAAAACCACATGATCATCTCATTACAAGCAG...GGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACACTGTACCACTACCATaGTGTTATTATCACAATTGC | + |
Preference number: 2 (lower is better) Translates to: LSSISFSVSGFMWSSLIYTVPLP*CYYHNC Trigger: GCAATTGTGATAATAACAGCATGGTAGTGGTACAGT...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CCA 90 bp | GTAAAGAGCATTTCACATTCTGTTGGTTGCCATTTTGTCTTATTGACAGTGTCCGTCTCTGGTTTTATGTaGAGTTCCTTGATCTACTTA | + |
Preference number: 2 (lower is better) Translates to: VKSISHSVGCHFVLLTVSVSGFM*SSLIYL Trigger: TAAGTAGATCAAGGAACTCCACATAAAACCAGAGAC...GGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR GCA 90 bp | GCTATGAACATAGTGGAGCATTTTTCCTTATTACAAGTTGGAACATATTCTGGGAATTTTCTGAGGAAATaGCAGATTGATGTCCAGAGT | + |
Preference number: 2 (lower is better) Translates to: AMNIVEHFSLLQVGTYSGNFLRK*QIDVQS Trigger: ACTCTGGACATCAATCTGGCATTTCCTCAGAAAATT...CCCAGAATATGTTCCAACTTGTAATAAGGAAAAATGCTCCACTATGTTCATAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | GCTATCCTGAAAGTTCCCTATACCCTCCCTCCGCCCTaGTCCCCTACCACCCACTCCCGCTTCTTGGCCCTA | + |
Preference number: 3 (lower is better) Translates to: AILKVPYTLPPP*SPTTHSRFLAL Trigger: TAGGGCCAAGAAGCGGGAGTGGGTGGTAGGGGAGCAGGGCGGAGGGAGGGTATAGGGAACTTTCAGGATAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGTCTCTAGCTCCTTCATaGGGGACCCTGTGTTCCGTC | + |
Preference number: 3 (lower is better) Translates to: RHSSILGHRTFTGPLLPLSLAPS*GTLCSV Trigger: GACGGAACACAGGGTCCCCAATGAAGGAGCTAGAGA...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGTGCCCAGGAGAGGTATaGCTGATAGTGCTATGTCCA | + |
Preference number: 3 (lower is better) Translates to: RHSSILGHRTFTGPLLPLCPGEV*LIVLCP Trigger: TGGACATAGCACTATCAGCAATACCTCTCCTGGGCA...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | CCAGTCTGGCCTCAAACTCAGAAATCCACCTGTCTCTaGCTTCCAAGTGCTGGGATTAAAGGTGTGCACCAA | + |
Preference number: 3 (lower is better) Translates to: PVWPQTQKSTCL*LPSAGIKGVHQ Trigger: TTGGTGCACACCTTTAATCCCAGCACTTGGAAGGCAGAGACAGGTGGATTTCTGAGTTTGAGGCCAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 72 bp | TTAATCCTGCTTCTTGGCCCAGACATTCCTCTATACTaGGGCATAGAACCTTCACAGGACCTCTCCTCCCAC | + |
Preference number: 3 (lower is better) Translates to: LILLLGPDIPLY*GIEPSQDLSSH Trigger: GTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCTGGGCCAAGAAGCAGGATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | TCCCGCTTCTTGGCCCTAGCATTCTCCTATAAAGTTTaGAATACAGGGTTTCTCTGTAGAGCCCTGGCTGTC | + |
Preference number: 3 (lower is better) Translates to: SRFLALAFSYKV*NTGFLCRALAV Trigger: GACAGCCAGGGCTCTACAGAGAAACCCTGTATTGCAAACTTTATAGGAGAATGCTAGGGCCAAGAAGCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | ATGGGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTaGTCCACACTTTGTCCCTGCAAATCCTTCCATGGA | + |
Preference number: 3 (lower is better) Translates to: MGQSLDRHSFSL*STLCPCKSFHG Trigger: TCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGCCATTTAGTTTGGTGTaGGGTACTGGTTTGCTGTAT | + |
Preference number: 3 (lower is better) Translates to: RHSSILGHRTFTGPLLPLPFSLV*GTGLLY Trigger: ATACAGCAAACCAGTACCCAACACCAAACTAAATGG...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGTTGTGTTACCTCACCTaGGATGATATTCTGCAGATC | + |
Preference number: 3 (lower is better) Translates to: RHSSILGHRTFTGPLLPLLCYLT*DDILQI Trigger: GATCTGCAGAATATCATCCAAGGTGAGGTAACACAA...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCTGGGAAGAAGCCAACTaGATCATGATGAATGTTTCT | + |
Preference number: 3 (lower is better) Translates to: GQSLDRHSFSLCSTLCPCWEEAN*IMMNVS Trigger: AGAAACATTCATCATGATCAAGTTGGCTTCTTCCCA...GCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGTGCCATTTTGTCTTATaGACAGTGTCCTTTGCCTTA | + |
Preference number: 3 (lower is better) Translates to: RHSSILGHRTFTGPLLPLCHFVL*TVSFAL Trigger: TAAGGCAAAGGACACTGTCAATAAGACAAAATGGCA...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGCTTTGGTCTTCCTTCTaGACTTTCATGTGTTTTGCA | + |
Preference number: 3 (lower is better) Translates to: RHSSILGHRTFTGPLLPLLWSSF*TFMCFA Trigger: TGCAAAACACATGAAAGTCAAGAAGGAAGACCAAAG...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 72 bp | TGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGGATaGATCCCCAGATGGGACAGTCTCTGGATCGTCATT | + |
Preference number: 3 (lower is better) Translates to: CNSVCVWWLFMG*IPRWDSLWIVI Trigger: AATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACCACCAAACACAGACACTATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTATGTATTTCCATGTATaGAACCATACCTGCATCCCT | + |
Preference number: 3 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLMYFHV*NHTCIP Trigger: AGGGATGCAGGTATGGTTCAATACATGGAAATACAT...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAACAGGTTTTGGATTTaGTCAAATGCTTTCTCTGCT | + |
Preference number: 3 (lower is better) Translates to: GQSLDRHSFSLCSTLCPCNRFWI*SNAFSA Trigger: AGCAGAGAAAGCATTTGACAAAATCCAAAACCTGTT...GCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGGAGACTTTCCATCTTTaGAGATCTTCTTCGATTTCT | + |
Preference number: 3 (lower is better) Translates to: RHSSILGHRTFTGPLLPLETFHL*RSSSIS Trigger: AGAAATCGAAGAAGATCTCAAAAGATGGAAAGTCTC...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTTGCCATTTTGTCTTATaGACAGTGTCCTTTGCCTTA | + |
Preference number: 3 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLCHFVL*TVSFAL Trigger: TAAGGCAAAGGACACTGTCAATAAGACAAAATGGCA...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGCTGTGTAGTACTCCATaGTGTAAATGTACCACATTT | + |
Preference number: 3 (lower is better) Translates to: RHSSILGHRTFTGPLLPLLCSTP*CKCTTF Trigger: AAATGTGGTACATTTACACAATGGAGTACTACACAG...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | CGTCATTCCTTCAGTCTTTGCTCCACACTTTGTCCCTaGAAATCCTTCCATGGATATTTTGTTCCCCCTTCT | + |
Preference number: 3 (lower is better) Translates to: RHSFSLCSTLCP*KSFHGYFVPPS Trigger: AGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTAACAGGTTTTGGATTTaGTCAAATGCTTTCTCTGCT | + |
Preference number: 3 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLNRFWI*SNAFSA Trigger: AGCAGAGAAAGCATTTGACAAAATCCAAAACCTGTT...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTGAGACTTTCCATCTTTaGAGATCTTCTTCGATTTCT | + |
Preference number: 3 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLETFHL*RSSSIS Trigger: AGAAATCGAAGAAGATCTCAAAAGATGGAAAGTCTC...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGTGCCCAGGAGAGGTATaGCTGATAGTGCTATGTCCA | + |
Preference number: 3 (lower is better) Translates to: ALVSAISAIVSVFGGCLWCPGEV*LIVLCP Trigger: TGGACATAGCACTATCAGCAATACCTCTCCTGGGCA...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTCCTACTGCACTGAAGTaGTTTATCAGGGTTAGGAGT | + |
Preference number: 3 (lower is better) Translates to: FLQSLLHTLSLQILPWIFPTALK*FIRVRS Trigger: ACTCCTAACCCTGATAAACAACTTCAGTGCAGTAGG...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGGGCTTTTCCCCCACTTaGTCCTCTATAAGTTTCAGT | + |
Preference number: 3 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKGFSPT*SSISFS Trigger: ACTGAAACTTATAGAGGACAAAGTGGGGGAAAAGCC...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | GTCACTGTACCACTACCATGCTGTTATTATCACAATTaGTCTGTAGTACAGCTTGAGGTTGGTGATGGTGAT | + |
Preference number: 3 (lower is better) Translates to: VTVPLPCCYYHN*SVVQLEVGDGD Trigger: ATCACCATCACCAACCTCAAGCTGTACTACAGAGCAATTGTGATAATAACAGCATGGTAGTGGTACAGTGAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | TGCTGTTATTATCACAATTGCTCTGTAGTACAGCTTGAGGTTGGTGATGGTGATCCTACTGCACTGAAGTaGTTTATCAGGGTTAGGAGT | + |
Preference number: 3 (lower is better) Translates to: CCYYHNCSVVQLEVGDGDPTALK*FIRVRS Trigger: ACTCCTAACCCTGATAAACAACTTCAGTGCAGTAGG...ATCACCATCACCAACCTCAAGCTGTACTACAGAGCAATTGTGATAATAACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGTTACAGCCCAAGCCATaGCTGTTATGTTCAGGAATT | + |
Preference number: 3 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKLQPKP*LLCSGI Trigger: AATTCCTGAACATAACAGCAATGGCTTGGGCTGTAA...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTAATCCCAGGGTTGTTTaGATTTGCATTTCCCTGATG | + |
Preference number: 3 (lower is better) Translates to: FLQSLLHTLSLQILPWIFNPRVV*ICISLM Trigger: CATCAGGGAAATGCAAATCAAAACAACCCTGGGATT...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGAATCCCAGGGTTGTTTaGATTTGCATTTCCCTGATG | + |
Preference number: 3 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKNPRVV*ICISLM Trigger: CATCAGGGAAATGCAAATCAAAACAACCCTGGGATT...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR TCA 72 bp | GCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTTaGTCTTACAGCCCAAGCCATTGCTGTTATGTTCAG | + |
Preference number: 3 (lower is better) Translates to: ALQFYEVPFVDS*SYSPSHCCYVQ Trigger: CTGAACATAACAGCAATGGCTTGGGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTGCAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR TCA 72 bp | AGTGCTATGTCCAAATTTTCTGAGGAAATGCCAGATTaGTGTCCAGAGTGTTTGTACCAGATTGCAATCCCA | + |
Preference number: 3 (lower is better) Translates to: SAMSKFSEEMPD*CPECLYQIAIP Trigger: TGGGATTGCAATCTGGTACAAACACTCTGGACATCAATCTGGCATTTCCTCAGAAAATTTGGACATAGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR TCA 72 bp | GTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTaGGGGACATCTGGGTTCTTTCCACCTTCTTGCTAT | + |
Preference number: 3 (lower is better) Translates to: VNVPHFLYPFLC*GTSGFFPPSCY Trigger: ATAGCAAGAAGGTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | AATGCCAGATTGATGTCCAGAGTGTTTGTACCAGATTaGAATCCCACCAATAATGGAGGAGTATACCTCTTT | + |
Preference number: 3 (lower is better) Translates to: NARLMSRVFVPD*NPTNNGGVYLF Trigger: AAAGAGGTATACTCCTCCATTATTGGTGGGATTGCAATCTGGTACAAACACTCTGGACATCAATCTGGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | CACACTTTGGTCTTCCTTCTTGACTTTCATGTGTTTTaGAGAATGTATCTTTGGTATTCTGAGCTTCTGGGC | + |
Preference number: 3 (lower is better) Translates to: HTLVFLLDFHVF*RMYLWYSELLG Trigger: GCCCAGAAGCTCAGAATACCAAAGATACATTCTGCAAAACACATGAAAGTCAAGAAGGAAGACCAAAGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | TGCTGTTATTATCACAATTGCTCTGTAGTACAGCTTGAGGTTGGTGATGGTGATCCATTTAGTTTGGTGTaGGGTACTGGTTTGCTGTAT | + |
Preference number: 3 (lower is better) Translates to: CCYYHNCSVVQLEVGDGDPFSLV*GTGLLY Trigger: ATACAGCAAACCAGTACCCAACACCAAACTAAATGG...ATCACCATCACCAACCTCAAGCTGTACTACAGAGCAATTGTGATAATAACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GTAAAGAGCATTTCACATTCTGTTGGTTGCCATTTTGTCTTATTGACAGTGTCCCCTACTGCACTGAAGTaGTTTATCAGGGTTAGGAGT | + |
Preference number: 3 (lower is better) Translates to: VKSISHSVGCHFVLLTVSPTALK*FIRVRS Trigger: ACTCCTAACCCTGATAAACAACTTCAGTGCAGTAGG...GGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGTTGTGTTACCTCACCTaGGATGATATTCTGCAGATC | + |
Preference number: 3 (lower is better) Translates to: ALVSAISAIVSVFGGCLWLCYLT*DDILQI Trigger: GATCTGCAGAATATCATCCAAGGTGAGGTAACACAA...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | TGCTGTTATTATCACAATTGCTCTGTAGTACAGCTTGAGGTTGGTGATGGTGATTGGGAAGAAGCCAACTaGATCATGATGAATGTTTCT | + |
Preference number: 3 (lower is better) Translates to: CCYYHNCSVVQLEVGDGDWEEAN*IMMNVS Trigger: AGAAACATTCATCATGATCAAGTTGGCTTCTTCCCA...ATCACCATCACCAACCTCAAGCTGTACTACAGAGCAATTGTGATAATAACAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTGAGACTTTCCATCTTTaGAGATCTTCTTCGATTTCT | + |
Preference number: 3 (lower is better) Translates to: FLQSLLHTLSLQILPWIFETFHL*RSSSIS Trigger: AGAAATCGAAGAAGATCTCAAAAGATGGAAAGTCTC...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTTTTATGTGGAGTTCCTaGATCTACTTAGACTTGAGC | + |
Preference number: 3 (lower is better) Translates to: CKCTTFSVSIPLLRDIWVFMWSS*IYLDLS Trigger: GCTCAAGTCTAAGTAGATCAAGGAACTCCACATAAA...AACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGTTCACATTCTGTTGGTaGCCATTTTGTCTTATTGAC | + |
Preference number: 3 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKFTFCW*PFCLID Trigger: GTCAATAAGACAAAATGGCAACCAACAGAATGTGAA...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTGCATTTCACATTCTGTaGGTTGCCATTTTGTCTTAT | + |
Preference number: 3 (lower is better) Translates to: FLQSLLHTLSLQILPWIFAFHIL*VAILSY Trigger: ATAAGACAAAATGGCAACCAACAGAATGTGAAATGC...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGCTTTGGTCTTCCTTCTaGACTTTCATGTGTTTTGCA | + |
Preference number: 3 (lower is better) Translates to: ALVSAISAIVSVFGGCLWLWSSF*TFMCFA Trigger: TGCAAAACACATGAAAGTCAAGAAGGAAGACCAAAG...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR TCA 72 bp | CTTTCATGTGTTTTGCAGAATGTATCTTTGGTATTCTaGGCTTCTGGGCTAATATCCACTTACCAGTCAGTG | + |
Preference number: 3 (lower is better) Translates to: LSCVLQNVSLVF*ASGLISTYQSV Trigger: CACTGACTGGTAAGTGGATATTAGCCCAGAAGCTCAGAATACCAAAGATACATTCTGCAAAACACATGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | ACATTGATCAACCTGTCTGTCACTGTACCACTACCATaGTGTTATTATCACAATTGCTCTGTAGTACAGCTT | + |
Preference number: 3 (lower is better) Translates to: TLINLSVTVPLP*CYYHNCSVVQL Trigger: AAGCTGTACTACAGAGCAATTGTGATAATAACAGCATGGTAGTGGTACAGTGACAGACAGGTTGATCAATGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | TTGCTGATAGTGCTATGTCCAAATTTTCTGAGGAAATaGCAGATTGATGTCCAGAGTGTTTGTACCAGATTG | + |
Preference number: 3 (lower is better) Translates to: LLIVLCPNFLRK*QIDVQSVCTRL Trigger: CAATCTGGTACAAACACTCTGGACATCAATCTGGCATTTCCTCAGAAAATTTGGACATAGCACTATCAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | CTTCCAAGTGCTGGGATTAAAGGTGTGCACCAACACTaGCCGGCTTTGTTAGATATATTCTTAATTTACATT | + |
Preference number: 3 (lower is better) Translates to: LPSAGIKGVHQH*PALLDIFLIYI Trigger: AATGTAAATTAAGAATATATCTAACAAAGCCGGGCAGTGTTGGTGCACACCTTTAATCCCAGCACTTGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 72 bp | GATGTATTTCCATGTATTGAACCATACCTGCATCCCTaGGAAGAAGCCAACTTGATCATGATGAATGTTTCT | + |
Preference number: 3 (lower is better) Translates to: DVFPCIEPYLHP*EEANLIMMNVS Trigger: AGAAACATTCATCATGATCAAGTTGGCTTCTTCCCAGGGATGCAGGTATGGTTCAATACATGGAAATACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 72 bp | TTCCCCCACTTTGTCCTCTATAAGTTTCAGTGTCTCTaGTTTTATGTGGAGTTCCTTGATCTACTTAGACTT | + |
Preference number: 3 (lower is better) Translates to: FPHFVLYKFQCL*FYVEFLDLLRL Trigger: AAGTCTAAGTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAAAGTGGGGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 72 bp | TTCCATGGATATTTTGTTCCCCCTTCTAAGAAGGATTaGAGTATCCACACTTTGGTCTTCCTTCTTGACTTT | + |
Preference number: 3 (lower is better) Translates to: FHGYFVPPSKKD*SIHTLVFLLDF Trigger: AAAGTCAAGAAGGAAGACCAAAGTGTGGATACTCCAATCCTTCTTAGAAGGGGGAACAAAATATCCATGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTAACAGGTTTTGGATTTaGTCAAATGCTTTCTCTGCT | + |
Preference number: 3 (lower is better) Translates to: CKCTTFSVSIPLLRDIWVNRFWI*SNAFSA Trigger: AGCAGAGAAAGCATTTGACAAAATCCAAAACCTGTT...AACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | GTAAAGAGCATTTCACATTCTGTTGGTTGCCATTTTGTCTTATTGACAGTGTCCTTTATGTGGAGTTCCTaGATCTACTTAGACTTGAGC | + |
Preference number: 3 (lower is better) Translates to: VKSISHSVGCHFVLLTVSFMWSS*IYLDLS Trigger: GCTCAAGTCTAAGTAGATCAAGGAACTCCACATAAA...GGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | GTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTaGAATTTTATGAGGTCCCATTTGTCGATTCTTGAT | + |
Preference number: 3 (lower is better) Translates to: VLLTVSFALQKL*NFMRSHLSILD Trigger: ATCAAGAATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAGGACACTGTCAATAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 72 bp | TGTTTTGCAGAATGTATCTTTGGTATTCTGAGCTTCTaGGCTAATATCCACTTACCAGTCAGTGCATATCAT | + |
Preference number: 3 (lower is better) Translates to: CFAECIFGILSF*ANIHLPVSAYH Trigger: ATGATATGCACTGACTGGTAAGTGGATATTAGCCCAGAAGCTCAGAATACCAAAGATACATTCTGCAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | CATTTCTGGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTACCATGGGAAGAAGCCAACTaGATCATGATGAATGTTTCT | + |
Preference number: 3 (lower is better) Translates to: HFWVFNYITLINLSVTVPWEEAN*IMMNVS Trigger: AGAAACATTCATCATGATCAAGTTGGCTTCTTCCCA...TGGTACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR-3UTR CAA 90 bp | CATTTCTGGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTACCAATGTATTTCCATGTATaGAACCATACCTGCATCCCT | + |
Preference number: 3 (lower is better) Translates to: HFWVFNYITLINLSVTVPMYFHV*NHTCIP Trigger: AGGGATGCAGGTATGGTTCAATACATGGAAATACAT...TGGTACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR TCA 72 bp | GTGAGTTCTTTTGTGATTGTGTTACCTCACCTTGGATaGTATTCTGCAGATCCACCCATTTATCTAAGAATT | + |
Preference number: 3 (lower is better) Translates to: VSSFVIVLPHLG*YSADPPIYLRI Trigger: AATTCTTAGATAAATGGGTGGATCTGCAGAATATCATCCAAGGTGAGGTAACACAATCACAAAAGAACTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR GCA 72 bp | TTAGGATTGGTAAAGAGCATTTCACATTCTGTTGGTTaGCATTTTGTCTTATTGACAGTGTCCTTTGCCTTA | + |
Preference number: 3 (lower is better) Translates to: LGLVKSISHSVG*HFVLLTVSFAL Trigger: TAAGGCAAAGGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTACCAATCCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 72 bp | TTAGTGGGATTGCTTCAAGTTTCTCTCCATTTAGTTTaGTGTTGGGTACTGGTTTGCTGTATATTTCTTTTA | + |
Preference number: 3 (lower is better) Translates to: LVGLLQVSLHLV*CWVLVCCIFLL Trigger: TAAAAGAAATATACAGCAAACCAGTACCCAACACCAAACTAAATGGAGAGAAACTTGAAGCAATCCCACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CCA 72 bp | AAAGATCAAGTGAGCATAGGTGTGTCAATTCATTTCTaGGTCTTCAATTATATTACATTGATCAACCTGTCT | + |
Preference number: 3 (lower is better) Translates to: KDQVSIGVSIHF*VFNYITLINLS Trigger: AGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATGAATTGACACACCTATGCTCACTTGATCTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGAATTCAGATCCAAAGTaGCATGATGCTGGCACAGAC | + |
Preference number: 4 (lower is better) Translates to: RHSSILGHRTFTGPLLPLNSDPK*HDAGTD Trigger: GTCTGTGCCAGCATCATGCCACTTTGGATCTGAATT...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTATGAGCAGTATTTGCTaGTCTTCATTTGGTTGGTGT | + |
Preference number: 4 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLMSSIC*SSFGWC Trigger: ACACCAACCAAATGAAGATCAGCAAATACTGCTCAT...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | GGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCATTGCTTCTGATGTCTaGACAATAAAAGCACCATGT | + |
Preference number: 4 (lower is better) Translates to: GQSLDRHSFSLCSTLCPCIASDV*TIKAPC Trigger: ACATGGTGCTTTTATTGTTCAGACATCAGAAGCAAT...GCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTTTGCTGATCTTCATTTaGTTGGTGTCACTCACATTG | + |
Preference number: 4 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLLLIFI*LVSLTL Trigger: CAATGTGAGTGACACCAACCAAATGAAGATCAGCAA...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | TCTGTAGTACAGCTTGAGGTTGGTGATGGTGATTCCACCAGAGGCTCTTTCATTAATTCAGATCCAAAGTaGCATGATGCTGGCACAGAC | + |
Preference number: 4 (lower is better) Translates to: SVVQLEVGDGDSTRGSFINSDPK*HDAGTD Trigger: GTCTGTGCCAGCATCATGCCACTTTGGATCTGAATT...AATGAAAGAGCCTCTGGTGGAATCACCATCACCAACCTCAAGCTGTACTACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | GTTAACAGCCAGTTGAGCCAGCACCATTTTATGAGAATGCTCTCTTCTTCTCCATTCCTCCAGAGACAGTaGGACTGTCCACTGAATTCA | + |
Preference number: 4 (lower is better) Translates to: VNSQLSQHHFMRMLSSSPFLQRQ*DCPLNS Trigger: TGAATTCAGTGGACAGTCCCACTGTCTCTGGAGGAA...TGGAGAAGAAGAGAGCATTCTCATAAAATGGTGCTGGCTCAACTGGCTGTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | ATTGAACCATACCTGCATCCCTGGGAAGAAGCCAACTaGATCATGATGAATGTTTCTGTGCTCCAGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: IEPYLHPWEEAN*IMMNVSVLQLS Trigger: GGAAAGCTGGAGCACAGAAACATTCATCATGATCAAGTTGGCTTCTTCCCAGGGATGCAGGTATGGTTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | TTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTTCCTCCAGAGACAGTaGGACTGTCCACTGAATTCA | + |
Preference number: 4 (lower is better) Translates to: FLQSLLHTLSLQILPWIFFLQRQ*DCPLNS Trigger: TGAATTCAGTGGACAGTCCCACTGTCTCTGGAGGAA...AAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | CCACACTTTGTCCCTGCAAATCCTTCCATGGATATTTaGTTCCCCCTTCTAAGAAGGATTGGAGTATCCACA | + |
Preference number: 4 (lower is better) Translates to: PHFVPANPSMDI*FPLLRRIGVST Trigger: TGTGGATACTCCAATCCTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | TCTGTAGTACAGCTTGAGGTTGGTGATGGTGATTCCACCAGAGGCTCTTTCATTATGAGCAGTATTTGCTaGTCTTCATTTGGTTGGTGT | + |
Preference number: 4 (lower is better) Translates to: SVVQLEVGDGDSTRGSFIMSSIC*SSFGWC Trigger: ACACCAACCAAATGAAGATCAGCAAATACTGCTCAT...AATGAAAGAGCCTCTGGTGGAATCACCATCACCAACCTCAAGCTGTACTACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | TCTGTAGTACAGCTTGAGGTTGGTGATGGTGATTCCACCAGAGGCTCTTTCATTTGCTTGCATTGCTTCTaGTGTCTGAACAATAAAAGC | + |
Preference number: 4 (lower is better) Translates to: SVVQLEVGDGDSTRGSFICLHCF*CLNNKS Trigger: GCTTTTATTGTTCAGACATCAGAAGCAATGCAAGCA...AATGAAAGAGCCTCTGGTGGAATCACCATCACCAACCTCAAGCTGTACTACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR GCA 90 bp | TCTGTAGTACAGCTTGAGGTTGGTGATGGTGATTCCACCAGAGGCTCTTTCATTCTTTTTCTCAGGAGATaGTCTCCAGTAATTGATGCT | + |
Preference number: 4 (lower is better) Translates to: SVVQLEVGDGDSTRGSFILFLRR*SPVIDA Trigger: AGCATCAATTACTGGAGAGCATCTCCTGAGAAAAAG...AATGAAAGAGCCTCTGGTGGAATCACCATCACCAACCTCAAGCTGTACTACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | GCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTaGTCGATTCTTGATCTTACAGCCCAAGCCATTGCT | + |
Preference number: 4 (lower is better) Translates to: ALQKLCNFMRSH*SILDLTAQAIA Trigger: AGCAATGGCTTGGGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | GCTCTTGTTAGTGCAATATCTGCAATAGTGTCTGTGTTTGGTGGTTGTTTATGGAATTCAGATCCAAAGTaGCATGATGCTGGCACAGAC | + |
Preference number: 4 (lower is better) Translates to: ALVSAISAIVSVFGGCLWNSDPK*HDAGTD Trigger: GTCTGTGCCAGCATCATGCCACTTTGGATCTGAATT...CCATAAACAACCACCAAACACAGACACTATTGCAGATATTGCACTAACAAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACTTCCTCCAGAGACAGTaGGACTGTCCACTGAATTCA | + |
Preference number: 4 (lower is better) Translates to: LSSISFSVSGFMWSSLIYFLQRQ*DCPLNS Trigger: TGAATTCAGTGGACAGTCCCACTGTCTCTGGAGGAA...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | TTGGAACATATTCTGGGTACATGCCCAGGAGAGGTATaGCTGATAGTGCTATGTCCAAATTTTCTGAGGAAA | + |
Preference number: 4 (lower is better) Translates to: LEHILGTCPGEV*LIVLCPNFLRK Trigger: TTTCCTCAGAAAATTTGGACATAGCACTATCAGCAATACCTCTCCTGGGCATGTACCCAGAATATGTTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTaGAGGGACATCTGGGTTCTTTCCACCTTCTTGCTA | + |
Preference number: 4 (lower is better) Translates to: CKCTTFSVSIPL*RDIWVLSTFLL Trigger: TAGCAAGAAGGTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACTGGTGTCACTCACATTaGTATAAGCACCAGCAGAGA | + |
Preference number: 4 (lower is better) Translates to: LSSISFSVSGFMWSSLIYWCHSH*YKHQQR Trigger: TCTCTGCTGGTGCTTATACCAATGTGAGTGACACCA...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACCACTTGTTGTCACCATaGCTCCTACAAGAAACACAT | + |
Preference number: 4 (lower is better) Translates to: LSSISFSVSGFMWSSLIYHLLSP*LLQETH Trigger: ATGTGTTTCTTGTAGGAGTCATGGTGACAACAAGTG...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | ACTTTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTTGTTGTCACCATaGCTCCTACAAGAAACACAT | + |
Preference number: 4 (lower is better) Translates to: TLSSISFSVSGFMWSSLIHLLSP*LLQETH Trigger: ATGTGTTTCTTGTAGGAGTCATGGTGACAACAAGTG...GATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR GCA 90 bp | ACACTTTGTCCCTGCAAATCCTTCCATGGATATTTTGTTCCCCCTTCTAAGAAGAAGCCAAATATCCCCTaGAGTAAGGAACATCATTAT | + |
Preference number: 4 (lower is better) Translates to: TLCPCKSFHGYFVPPSKKKPNIP*SKEHHY Trigger: ATAATGATGTTCCTTACTGCAGGGGATATTTGGCTT...CTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGATTTGCAGGGACAAAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | GCTATGAACATAGTGGAGCATTTTTCCTTATTACAAGTTGGAACATATTCTGGGTGGTGTCACTCACATTaGTATAAGCACCAGCAGAGA | + |
Preference number: 4 (lower is better) Translates to: AMNIVEHFSLLQVGTYSGWCHSH*YKHQQR Trigger: TCTCTGCTGGTGCTTATACCAATGTGAGTGACACCA...CCCAGAATATGTTCCAACTTGTAATAAGGAAAAATGCTCCACTATGTTCATAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTATTGCTTCTGATGTCTaGACAATAAAAGCACCATGT | + |
Preference number: 4 (lower is better) Translates to: CKCTTFSVSIPLLRDIWVIASDV*TIKAPC Trigger: ACATGGTGCTTTTATTGTTCAGACATCAGAAGCAAT...AACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACTGCTTGCATTGCTTCTaGTGTCTGAACAATAAAAGC | + |
Preference number: 4 (lower is better) Translates to: LSSISFSVSGFMWSSLIYCLHCF*CLNNKS Trigger: GCTTTTATTGTTCAGACATCAGAAGCAATGCAAGCA...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR GCA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACCTTTTTCTCAGGAGATaGTCTCCAGTAATTGATGCT | + |
Preference number: 4 (lower is better) Translates to: LSSISFSVSGFMWSSLIYLFLRR*SPVIDA Trigger: AGCATCAATTACTGGAGAGCATCTCCTGAGAAAAAG...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | GTAAAGAGCATTTCACATTCTGTTGGTTGCCATTTTGTCTTATTGACAGTGTCCTTGCTGATCTTCATTTaGTTGGTGTCACTCACATTG | + |
Preference number: 4 (lower is better) Translates to: VKSISHSVGCHFVLLTVSLLIFI*LVSLTL Trigger: CAATGTGAGTGACACCAACCAAATGAAGATCAGCAA...GGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | TGGATCAATTCAAATTCTTCACATGTTAACAGCCAGTaGAGCCAGCACCATTTTATGAGAATGCTCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: WINSNSSHVNSQ*SQHHFMRMLSS Trigger: AGAAGAGAGCATTCTCATAAAATGGTGCTGGCTCAACTGGCTGTTAACATGTGAAGAATTTGAATTGATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | TACTTGTTAGTTCATATTGTTGTTTCTCCTATGGTGTaGCAAATCCCTTCAGCTCCTTGGGTACTTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: YLLVHIVVSPMV*QIPSAPWVLSL Trigger: TAGAGAAAGTACCCAAGGAGCTGAAGGGATTTGCAACACCATAGGAGAAACAACAATATGAACTAACAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | GCTATGAACATAGTGGAGCATTTTTCCTTATTACAAGTTGGAACATATTCTGGGATGAGCAGTATTTGCTaGTCTTCATTTGGTTGGTGT | + |
Preference number: 4 (lower is better) Translates to: AMNIVEHFSLLQVGTYSGMSSIC*SSFGWC Trigger: ACACCAACCAAATGAAGATCAGCAAATACTGCTCAT...CCCAGAATATGTTCCAACTTGTAATAAGGAAAAATGCTCCACTATGTTCATAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR TCA 90 bp | CATTTCTGGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTACCATGCTTGCATTGCTTCTaGTGTCTGAACAATAAAAGC | + |
Preference number: 4 (lower is better) Translates to: HFWVFNYITLINLSVTVPCLHCF*CLNNKS Trigger: GCTTTTATTGTTCAGACATCAGAAGCAATGCAAGCA...TGGTACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR GCA 90 bp | CATTTCTGGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTACCACTTTTTCTCAGGAGATaGTCTCCAGTAATTGATGCT | + |
Preference number: 4 (lower is better) Translates to: HFWVFNYITLINLSVTVPLFLRR*SPVIDA Trigger: AGCATCAATTACTGGAGAGCATCTCCTGAGAAAAAG...TGGTACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CCA 90 bp | CATTTCTGGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTACCATTGCTGATCTTCATTTaGTTGGTGTCACTCACATTG | + |
Preference number: 4 (lower is better) Translates to: HFWVFNYITLINLSVTVPLLIFI*LVSLTL Trigger: CAATGTGAGTGACACCAACCAAATGAAGATCAGCAA...TGGTACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | TTTAGGATTGGTAAAGAGCATTTCACATTCTGTTGGTaGCCATTTTGTCTTATTGACAGTGTCCTTTGCCTT | + |
Preference number: 4 (lower is better) Translates to: FRIGKEHFTFCW*PFCLIDSVLCL Trigger: AAGGCAAAGGACACTGTCAATAAGACAAAATGGCAACCAACAGAATGTGAAATGCTCTTTACCAATCCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR GCA 90 bp | CATTTCTGGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTACCAAAGCCAAATATCCCCTaGAGTAAGGAACATCATTAT | + |
Preference number: 4 (lower is better) Translates to: HFWVFNYITLINLSVTVPKPNIP*SKEHHY Trigger: ATAATGATGTTCCTTACTGCAGGGGATATTTGGCTT...TGGTACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | TTTAGTGGGATTGCTTCAAGTTTCTCTCCATTTAGTTaGGTGTTGGGTACTGGTTTGCTGTATATTTCTTTT | + |
Preference number: 4 (lower is better) Translates to: FSGIASSFSPFS*VLGTGLLYISF Trigger: AAAAGAAATATACAGCAAACCAGTACCCAACACCAAACTAAATGGAGAGAAACTTGAAGCAATCCCACTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
3UTR CAA 72 bp | TATATGTTGGATATTAGCCCTCTATCAGATTTAGGATaGGTAAAGAGCATTTCACATTCTGTTGGTTGCCAT | + |
Preference number: 4 (lower is better) Translates to: YMLDISPLSDLG*VKSISHSVGCH Trigger: ATGGCAACCAACAGAATGTGAAATGCTCTTTACCAATCCTAAATCTGATAGAGGGCTAATATCCAACATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | GGTTGTTTATGGGATGGATCCCCAGATGGGACAGTCTCTGGATCGTCATTCCTTTTTGCTGATCTTCATTaGGTTGGTGTCACTCACATT | + |
Preference number: 5 (lower is better) Translates to: GCLWDGSPDGTVSGSSFLFADLH*VGVTHI Trigger: AATGTGAGTGACACCAACCAAATGAAGATCAGCAAA...AAGGAATGACGATCCAGAGACTGTCCCATCTGGGGATCCATCCCATAAACAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | GGACAGTCTCTGGATCGTCATTCCTTCAGTCTTTGCTCCACACTTTGTCCCTGCAATCCCCTGATAATTTaGTTTGTGGGAAAGTATGAG | + |
Preference number: 5 (lower is better) Translates to: GQSLDRHSFSLCSTLCPCNPLII*FVGKYE Trigger: CTCATACTTTCCCACAAACAAAATTATCAGGGGATT...GCAGGGACAAAGTGTGGAGCAAAGACTGAAGGAATGACGATCCAGAGACTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | AGACATTCCTCTATACTGGGGCATAGAACCTTCACAGGACCTCTCCTCCCACTGAATCCCCTGATAATTTaGTTTGTGGGAAAGTATGAG | + |
Preference number: 5 (lower is better) Translates to: RHSSILGHRTFTGPLLPLNPLII*FVGKYE Trigger: CTCATACTTTCCCACAAACAAAATTATCAGGGGATT...CAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGCCCCAGTATAGAGGAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | GTTAACAGCCAGTTGAGCCAGCACCATTTTATGAGAATGCTCTCTTCTTCTCCAATGAAGATGCTTGCATaGCTTCTGATGTCTGAACAA | + |
Preference number: 5 (lower is better) Translates to: VNSQLSQHHFMRMLSSSPMKMLA*LLMSEQ Trigger: TTGTTCAGACATCAGAAGCAATGCAAGCATCTTCAT...TGGAGAAGAAGAGAGCATTCTCATAAAATGGTGCTGGCTCAACTGGCTGTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTTTTGCTGATCTTCATTaGGTTGGTGTCACTCACATT | + |
Preference number: 5 (lower is better) Translates to: CKCTTFSVSIPLLRDIWVFADLH*VGVTHI Trigger: AATGTGAGTGACACCAACCAAATGAAGATCAGCAAA...AACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | ACTTTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCATCAGTAGAAACATATaGGCTAGAACTCCAAGTCCA | + |
Preference number: 5 (lower is better) Translates to: TLSSISFSVSGFMWSSLIISRNI*ARTPSP Trigger: TGGACTTGGAGTTCTAGCCAATATGTTTCTACTGAT...GATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACATCAGTAGAAACATATaGGCTAGAACTCCAAGTCCA | + |
Preference number: 5 (lower is better) Translates to: LSSISFSVSGFMWSSLIYISRNI*ARTPSP Trigger: TGGACTTGGAGTTCTAGCCAATATGTTTCTACTGAT...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | TTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACATGAAGATGCTTGCATaGCTTCTGATGTCTGAACAA | + |
Preference number: 5 (lower is better) Translates to: LSSISFSVSGFMWSSLIYMKMLA*LLMSEQ Trigger: TTGTTCAGACATCAGAAGCAATGCAAGCATCTTCAT...GTAGATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | ACTTTGTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCATGAAGATGCTTGCATaGCTTCTGATGTCTGAACAA | + |
Preference number: 5 (lower is better) Translates to: TLSSISFSVSGFMWSSLIMKMLA*LLMSEQ Trigger: TTGTTCAGACATCAGAAGCAATGCAAGCATCTTCAT...GATCAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGACAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS-3UTR CAA 90 bp | CATTTCTGGGTCTTCAATTATATTACATTGATCAACCTGTCTGTCACTGTACCAATCAGTAGAAACATATaGGCTAGAACTCCAAGTCCA | + |
Preference number: 5 (lower is better) Translates to: HFWVFNYITLINLSVTVPISRNI*ARTPSP Trigger: TGGACTTGGAGTTCTAGCCAATATGTTTCTACTGAT...TGGTACAGTGACAGACAGGTTGATCAATGTAATATAATTGAAGACCCAGAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS CCA 72 bp | AGTGGACCTGTATGGTGGAGATTCCTCCAGAGACAGTaGGACTGTCCACTGAATTCAGATCCAAAGTGGCAT | + |
Preference number: 6 (lower is better) Translates to: SGPVWWRFLQRQ*DCPLNSDPKWH Trigger: ATGCCACTTTGGATCTGAATTCAGTGGACAGTCCCACTGTCTCTGGAGGAATCTCCACCATACAGGTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049694.4 ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS CCA 72 bp | AGACAGTGGGACTGTCCACTGAATTCAGATCCAAAGTaGCATGATGCTGGCACAGACCGGAGGAATAAATAT | + |
Preference number: 6 (lower is better) Translates to: RQWDCPLNSDPK*HDAGTDRRNKY Trigger: ATATTTATTCCTCCGGTCTGTGCCAGCATCATGCCACTTTGGATCTGAATTCAGTGGACAGTCCCACTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049694.4 ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS TCA 72 bp | GTGTGGCCTTTTTCTCAGGAGATGCTCTCCAGTAATTaGTGCTATGAAGATGCTTGCATTGCTTCTGATGTC | + |
Preference number: 6 (lower is better) Translates to: VWPFSQEMLSSN*CYEDACIASDV Trigger: GACATCAGAAGCAATGCAAGCATCTTCATAGCATCAATTACTGGAGAGCATCTCCTGAGAAAAAGGCCACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049694.4 ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS CAA 72 bp | CTGATAATTTTGTTTGTGGGAAAGTATGAGCAGTATTaGCTGATCTTCATTTGGTTGGTGTCACTCACATTG | + |
Preference number: 6 (lower is better) Translates to: LIILFVGKYEQY*LIFIWLVSLTL Trigger: CAATGTGAGTGACACCAACCAAATGAAGATCAGCAAATACTGCTCATACTTTCCCACAAACAAAATTATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049694.4 ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |
||
CDS CAA 72 bp | AAAGTTGTCACTGTTAAAATCAATCCCCTGATAATTTaGTTTGTGGGAAAGTATGAGCAGTATTTGCTGATC | + |
Preference number: 6 (lower is better) Translates to: KVVTVKINPLII*FVGKYEQYLLI Trigger: GATCAGCAAATACTGCTCATACTTTCCCACAAACAAAATTATCAGGGGATTGATTTTAACAGTGACAACTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049694.4 ENSMUST00000228040.2 ENSMUST00000228070.2 ENSMUST00000228951.2 |