Pregenerated sensors for VMN1R257 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095081

Ensembl transcript IDs: ENSMUST00000178871.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTGGTCCAGATCATGATGCTCATGAATGTGGCATCATGGGCAAACTaGAAGACAATACCTACAATGAATCCAGAAGTGGAACAGAACAAG	+
Preference number: 5 (lower is better) Translates to: LVQIMMLMNVASWAN*KTIPTMNPEVEQNK Trigger: CTTGTTCTGTTCCACTTCTGGATTCATTGTAGGTATTGTCTTGCAGTTTGCCCATGATGCCACATTCATGAGCATCATGATCTGGACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178871.2
CDS CCA 90 bp	ATGGAGACACTGGTCCAGATCATGATGCTCATGAATGTGGCATCATaGGCAAACTGCAAGACAATACCTACAATGAATCCAGAAGTGGAA	+
Preference number: 5 (lower is better) Translates to: METLVQIMMLMNVAS*ANCKTIPTMNPEVE Trigger: TTCCACTTCTGGATTCATTGTAGGTATTGTCTTGCAGTTTGCCCATGATGCCACATTCATGAGCATCATGATCTGGACCAGTGTCTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178871.2
CDS CCA 72 bp	CTGGTCCAGATCATGATGCTCATGAATGTGGCATCATaGGCAAACTGCAAGACAATACCTACAATGAATCCA	+
Preference number: 6 (lower is better) Translates to: LVQIMMLMNVAS*ANCKTIPTMNP Trigger: TGGATTCATTGTAGGTATTGTCTTGCAGTTTGCCCATGATGCCACATTCATGAGCATCATGATCTGGACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178871.2
CDS GCA 72 bp	ATCATGATGCTCATGAATGTGGCATCATGGGCAAACTaGAAGACAATACCTACAATGAATCCAGAAGTGGAA	+
Preference number: 6 (lower is better) Translates to: IMMLMNVASWAN*KTIPTMNPEVE Trigger: TTCCACTTCTGGATTCATTGTAGGTATTGTCTTGCAGTTTGCCCATGATGCCACATTCATGAGCATCATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178871.2
CDS CAA 72 bp	ATACCTACAATGAATCCAGAAGTGGAACAGAACAAGTaGCTTTTAGAGTCAGTGTTATTGTCTGTTATCTGT	+
Preference number: 6 (lower is better) Translates to: IPTMNPEVEQNK*LLESVLLSVIC Trigger: ACAGATAACAGACAATAACACTGACTCTAAAAGCAACTTGTTCTGTTCCACTTCTGGATTCATTGTAGGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178871.2

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