Pregenerated sensors for VMN1R256 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095984

Ensembl transcript IDs: ENSMUST00000174775.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTGGTCCAGACCATGATGCTCATGAATGTGTCATCATGGGCAAACTaGAAGACAATGCCTACAATGAATCCAGAAGTGGAACAGAACAAG	+
Preference number: 5 (lower is better) Translates to: LVQTMMLMNVSSWAN*KTMPTMNPEVEQNK Trigger: CTTGTTCTGTTCCACTTCTGGATTCATTGTAGGCATTGTCTTGCAGTTTGCCCATGATGACACATTCATGAGCATCATGGTCTGGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174775.2
CDS TCA 72 bp	ACGGTCCCAACCCCAAACTGGCAAAGCAAGAGGAGCTaGAGAGCCACTTCCTCAGTGGTTTTCAGGGATTTA	+
Preference number: 6 (lower is better) Translates to: TVPTPNWQSKRS*RATSSVVFRDL Trigger: TAAATCCCTGAAAACCACTGAGGAAGTGGCTCTTCAGCTCCTCTTGCTTTGCCAGTTTGGGGTTGGGACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174775.2
CDS CCA 72 bp	GTGAGGAATAGAGTCAAGGCATTGGCCACAGCCATATaGCCTAAAATCACCTGTCTGGGTCTCTGTTTAGAA	+
Preference number: 6 (lower is better) Translates to: VRNRVKALATAI*PKITCLGLCLE Trigger: TTCTAAACAGAGACCCAGACAGGTGATTTTAGGCCATATGGCTGTGGCCAATGCCTTGACTCTATTCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174775.2
CDS CCA 72 bp	CTGGTCCAGACCATGATGCTCATGAATGTGTCATCATaGGCAAACTGCAAGACAATGCCTACAATGAATCCA	+
Preference number: 6 (lower is better) Translates to: LVQTMMLMNVSS*ANCKTMPTMNP Trigger: TGGATTCATTGTAGGCATTGTCTTGCAGTTTGCCCATGATGACACATTCATGAGCATCATGGTCTGGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174775.2
CDS CAA 90 bp	CATTTGAGTTCATTTGGAGGAGTTTTGGGAGCAAAAGCCATCATGTaGTTTGGAAATATAGTGAGGAATAGAGTCAAGGCATTGGCCACA	+
Preference number: 6 (lower is better) Translates to: HLSSFGGVLGAKAIM*FGNIVRNRVKALAT Trigger: TGTGGCCAATGCCTTGACTCTATTCCTCACTATATTTCCAAACAACATGATGGCTTTTGCTCCCAAAACTCCTCCAAATGAACTCAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174775.2
CDS TCA 72 bp	CCTTTACCTCTACTAACAGGAAAAAGAGTGAAAAACTaGTGGATACTCAGGACACAGGTGGAACACAAGTTT	+
Preference number: 6 (lower is better) Translates to: PLPLLTGKRVKN*WILRTQVEHKF Trigger: AAACTTGTGTTCCACCTGTGTCCTGAGTATCCATCAGTTTTTCACTCTTTTTCCTGTTAGTAGAGGTAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174775.2
CDS CCA 72 bp	TCTGTTATCTGTGGACCAGTGACCCTAATTGGAATGTaGATGTTACTTAAGACACTGAAAAACCAACAACTA	+
Preference number: 6 (lower is better) Translates to: SVICGPVTLIGM*MLLKTLKNQQL Trigger: TAGTTGTTGGTTTTTCAGTGTCTTAAGTAACATCCACATTCCAATTAGGGTCACTGGTCCACAGATAACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174775.2

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