Pregenerated sensors for VMN1R253 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000093871

Ensembl transcript IDs: ENSMUST00000172551.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ACAAGTTTACCTTTCCCTCTATTAAGAGGAACCAGAGTGACAAACTaGTGGACACCCAGGACACAGGTGGAACACAAGTTTGTGCTTCTT	+
Preference number: 5 (lower is better) Translates to: TSLPFPLLRGTRVTN*WTPRTQVEHKFVLL Trigger: AAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGGGTGTCCATCAGTTTGTCACTCTGGTTCCTCTTAATAGAGGGAAAGGTAAACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172551.2
CDS TCA 72 bp	GGAGTGAGGATGTGCTGCATTCGCTGGCGATGTCTATaGAGGAGAAGTACCATGGAGACACTGGTCCAGACC	+
Preference number: 6 (lower is better) Translates to: GVRMCCIRWRCL*RRSTMETLVQT Trigger: GGTCTGGACCAGTGTCTCCATGGTACTTCTCCTTCATAGACATCGCCAGCGAATGCAGCACATCCTCACTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172551.2
CDS TCA 72 bp	ACAGTTCCAACCCCAAACTGGCAAAGCAAGAGGAGCTaGAGAGCCACTTCCTCAGTGGTTTTCACGGATTTA	+
Preference number: 6 (lower is better) Translates to: TVPTPNWQSKRS*RATSSVVFTDL Trigger: TAAATCCGTGAAAACCACTGAGGAAGTGGCTCTTCAGCTCCTCTTGCTTTGCCAGTTTGGGGTTGGAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172551.2
CDS GCA 72 bp	AACAAATGTGACTACCAGCATCAAGATAGTACGGGTTaGTCTTGTCTCAGCTTGGCCTCTGGGGTTCTGATT	+
Preference number: 6 (lower is better) Translates to: NKCDYQHQDSTG*SCLSLASGVLI Trigger: AATCAGAACCCCAGAGGCCAAGCTGAGACAAGAGCAACCCGTACTATCTTGATGCTGGTAGTCACATTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172551.2
CDS TCA 72 bp	CATCATAGGCAAACTGCAAGAGGACAATGCCTACACTaGATCCAGAAGTGGAACAGAACAACTTTCTTTTCG	+
Preference number: 6 (lower is better) Translates to: HHRQTARGQCLH*IQKWNRTTFFS Trigger: CGAAAAGAAAGTTGTTCTGTTCCACTTCTGGATTCAGTGTAGGCATTGTCCTCTTGCAGTTTGCCTATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172551.2
CDS TCA 72 bp	CAGGTGGAACACAAGTTTGTGCTTCTTCCCACCAGGTaGCTGAAGGATTCTAATTTACATTTGAGTTCAGTT	+
Preference number: 6 (lower is better) Translates to: QVEHKFVLLPTR*LKDSNLHLSSV Trigger: AACTGAACTCAAATGTAAATTAGAATCCTTCAGTCACCTGGTGGGAAGAAGCACAAACTTGTGTTCCACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172551.2
CDS CAA 72 bp	GTGGAACAGAACAACTTTCTTTTCGAGTCAGTGTTATaGTCTGTTATCTGTGGACCACTGACCTTAATTGGA	+
Preference number: 6 (lower is better) Translates to: VEQNNFLFESVL*SVICGPLTLIG Trigger: TCCAATTAAGGTCAGTGGTCCACAGATAACAGACAATAACACTGACTCGAAAAGAAAGTTGTTCTGTTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172551.2

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