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Pregenerated sensors for VMN1R251 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094981

Ensembl transcript IDs: ENSMUST00000163096.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GGGTTGCTTTGGACTGAGCTTGGCTTCTGGGGTTCTGATTGGGAGTaGGGATGTGCTGCATTCGCTGGCGATGTCTATGGAGGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: GLLWTELGFWGSDWE*GCAAFAGDVYGGEV
Trigger: TACTTCTCCTCCATAGACATCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGAACCCCAGAAGCCAAGCTCAGTCCAAAGCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2
CDS GCA 90 bp CTGGTCCAGACCATGATGCTCATGAATGTGGCATCATACACAAACTaGAAGAAGACAATGCCCACACTGAATCCAGAAGTGGAACAGAAC +
Preference number: 5 (lower is better)
Translates to: LVQTMMLMNVASYTN*KKTMPTLNPEVEQN
Trigger: GTTCTGTTCCACTTCTGGATTCAGTGTGGGCATTGTCTTCTTGCAGTTTGTGTATGATGCCACATTCATGAGCATCATGGTCTGGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2
CDS TCA 90 bp CTCAGGACACAGGTGGAACACAAGTTTGTGCTTCTTACCACCAGGTaGCTGAAGGATTCTAATTTACATTTGAGGTCATTTGGAGGAGTT +
Preference number: 5 (lower is better)
Translates to: LRTQVEHKFVLLTTR*LKDSNLHLRSFGGV
Trigger: AACTCCTCCAAATGACCTCAAATGTAAATTAGAATCCTTCAGTCACCTGGTGGTAAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2
CDS TCA 72 bp TGGACTGAGCTTGGCTTCTGGGGTTCTGATTGGGAGTaGGGATGTGCTGCATTCGCTGGCGATGTCTATGGA +
Preference number: 6 (lower is better)
Translates to: WTELGFWGSDWE*GCAAFAGDVYG
Trigger: TCCATAGACATCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGAACCCCAGAAGCCAAGCTCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2
CDS CAA 72 bp CAGCATCAGGATAGTATGGGTTGCTTTGGACTGAGCTaGGCTTCTGGGGTTCTGATTGGGAGTGAGGATGTG +
Preference number: 6 (lower is better)
Translates to: QHQDSMGCFGLS*ASGVLIGSEDV
Trigger: CACATCCTCACTCCCAATCAGAACCCCAGAAGCCAAGCTCAGTCCAAAGCAACCCATACTATCCTGATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2
CDS TCA 72 bp CCTTTCCCTCTATTAAGAGGAACCAGAGTGACAAACTaGTGGACACTCAGGACACAGGTGGAACACAAGTTT +
Preference number: 6 (lower is better)
Translates to: PFPLLRGTRVTN*WTLRTQVEHKF
Trigger: AAACTTGTGTTCCACCTGTGTCCTGAGTGTCCATCAGTTTGTCACTCTGGTTCCTCTTAATAGAGGGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2
CDS GCA 72 bp AACAAATGTAAACACCAGCATCAGGATAGTATGGGTTaGTTTGGACTGAGCTTGGCTTCTGGGGTTCTGATT +
Preference number: 6 (lower is better)
Translates to: NKCKHQHQDSMG*FGLSLASGVLI
Trigger: AATCAGAACCCCAGAAGCCAAGCTCAGTCCAAAGCAACCCATACTATCCTGATGCTGGTGTTTACATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2
CDS TCA 72 bp CAGGTGGAACACAAGTTTGTGCTTCTTACCACCAGGTaGCTGAAGGATTCTAATTTACATTTGAGGTCATTT +
Preference number: 6 (lower is better)
Translates to: QVEHKFVLLTTR*LKDSNLHLRSF
Trigger: AAATGACCTCAAATGTAAATTAGAATCCTTCAGTCACCTGGTGGTAAGAAGCACAAACTTGTGTTCCACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2
CDS CAA 72 bp GTGGAACAGAACAGCTTTCTTTTCCAGTCAGTGTTATaGTCTGTTATCTGTGGACCACTGAACTTAATTGGA +
Preference number: 6 (lower is better)
Translates to: VEQNSFLFQSVL*SVICGPLNLIG
Trigger: TCCAATTAAGTTCAGTGGTCCACAGATAACAGACAATAACACTGACTGGAAAAGAAAGCTGTTCTGTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2
CDS TCA 72 bp TCTGTTATCTGTGGACCACTGAACTTAATTGGAATGTaGATGTTACTTAAGACACTGAAAAACCAACAACTG +
Preference number: 6 (lower is better)
Translates to: SVICGPLNLIGM*MLLKTLKNQQL
Trigger: CAGTTGTTGGTTTTTCAGTGTCTTAAGTAACATTCACATTCCAATTAAGTTCAGTGGTCCACAGATAACAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163096.2