Pregenerated sensors for VMN1R248 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096760Ensembl transcript IDs: ENSMUST00000105196.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AACCAGTCAAGACTGGAGAGAAATTATGGACAAACAGAAAGACATTaGCCAAGGTCCCAACCCCAAACTGGCAAAGCAAGAGGAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: NQSRLERNYGQTERH*PRSQPQTGKARGAE Trigger: TTCAGCTCCTCTTGCTTTGCCAGTTTGGGGTTGGGACCTTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105196.2 |
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| CDS CCA 90 bp | TGTCTGGGTCTCTGTTTAGAACCAGTCAAGACTGGAGAGAAATTATaGACAAACAGAAAGACATTGGCCAAGGTCCCAACCCCAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLGLCLEPVKTGEKL*TNRKTLAKVPTPNW Trigger: CCAGTTTGGGGTTGGGACCTTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGACCCAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105196.2 |
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| CDS CAA 90 bp | TGTGACCACCAGCATCAGGATAGTACGGGTTGCTCTTGTCTCAGCTaGGCCTCTGGGGTTCTGATTGGGAGTGAGGATGTGCTGCATTCG | + |
|
Preference number: 6 (lower is better) Translates to: CDHQHQDSTGCSCLS*ASGVLIGSEDVLHS Trigger: CGAATGCAGCACATCCTCACTCCCAATCAGAACCCCAGAGGCCAAGCTGAGACAAGAGCAACCCGTACTATCCTGATGCTGGTGGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105196.2 |
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| CDS GCA 72 bp | AACAAATGTGACCACCAGCATCAGGATAGTACGGGTTaGTCTTGTCTCAGCTTGGCCTCTGGGGTTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: NKCDHQHQDSTG*SCLSLASGVLI Trigger: AATCAGAACCCCAGAGGCCAAGCTGAGACAAGAGCAACCCGTACTATCCTGATGCTGGTGGTCACATTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105196.2 |
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