Pregenerated sensors for VMN1R246 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095837

Ensembl transcript IDs: ENSMUST00000174364.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AACCAGTCAAGACTGGAGAGAAATTATGGACAAAAAGAAAGACATTaGCCACGGTCCCAACCCCAAACTGGCAAAGCAAGAGGAGCTGAA	+
Preference number: 5 (lower is better) Translates to: NQSRLERNYGQKERH*PRSQPQTGKARGAE Trigger: TTCAGCTCCTCTTGCTTTGCCAGTTTGGGGTTGGGACCGTGGCCAATGTCTTTCTTTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174364.2
CDS CCA 90 bp	ATGGAGACACTGGTCCAGACCATGATGCTCATGAATGTGTCATCATaGGCAAACTGCAAGACAATGCCTACAATGAATCCAGAAGTGGAA	+
Preference number: 5 (lower is better) Translates to: METLVQTMMLMNVSS*ANCKTMPTMNPEVE Trigger: TTCCACTTCTGGATTCATTGTAGGCATTGTCTTGCAGTTTGCCCATGATGACACATTCATGAGCATCATGGTCTGGACCAGTGTCTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174364.2
CDS TCA 90 bp	ATAAGTTTACCTTTACCTCTACTAACAGGAAAAAGAGTGAAAAACTaGTGGATACTCAGGACACAGGTGGAACACAAGTTTGTGCTTCTT	+
Preference number: 5 (lower is better) Translates to: ISLPLPLLTGKRVKN*WILRTQVEHKFVLL Trigger: AAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGAGTATCCATCAGTTTTTCACTCTTTTTCCTGTTAGTAGAGGTAAAGGTAAACTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174364.2
CDS GCA 72 bp	ACCATGATGCTCATGAATGTGTCATCATGGGCAAACTaGAAGACAATGCCTACAATGAATCCAGAAGTGGAA	+
Preference number: 6 (lower is better) Translates to: TMMLMNVSSWAN*KTMPTMNPEVE Trigger: TTCCACTTCTGGATTCATTGTAGGCATTGTCTTGCAGTTTGCCCATGATGACACATTCATGAGCATCATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174364.2
CDS CAA 72 bp	TTGTTTGGAAATATAGTGAGGAATAGAGTCAAGGCATaGGCCACAGCCATATGGCCTAAAATCACCTGTCTG	+
Preference number: 6 (lower is better) Translates to: LFGNIVRNRVKA*ATAIWPKITCL Trigger: CAGACAGGTGATTTTAGGCCATATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACTATATTTCCAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174364.2

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