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Pregenerated sensors for VMN1R245 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096761

Ensembl transcript IDs: ENSMUST00000173886.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp AACCAGTCAAGACTGGAGAGAAATTATGGACAAACAGAAAGACATTaGCCACAGTCCCAACCCCAAACTGGCAAAGCAAGAGAATCTGAA +
Preference number: 5 (lower is better)
Translates to: NQSRLERNYGQTERH*PQSQPQTGKARESE
Trigger: TTCAGATTCTCTTGCTTTGCCAGTTTGGGGTTGGGACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173886.2
CDS TCA 90 bp CTCAGGACACAGGTGGAACACAAGTTTGTGCTTCTTGCCACCAGGTaGCTGAAGGATTCTAATTTACATTTGAGTTCATTTGGAGGAGTT +
Preference number: 5 (lower is better)
Translates to: LRTQVEHKFVLLATR*LKDSNLHLSSFGGV
Trigger: AACTCCTCCAAATGAACTCAAATGTAAATTAGAATCCTTCAGTCACCTGGTGGCAAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173886.2
CDS CCA 72 bp AAGCTAACAAATGTAAACACCAGGATCAGGATAGTATaGGTTGCTTTGGACTCAGCTTGGCCTCTGGGGTTC +
Preference number: 6 (lower is better)
Translates to: KLTNVNTRIRIV*VALDSAWPLGF
Trigger: GAACCCCAGAGGCCAAGCTGAGTCCAAAGCAACCCATACTATCCTGATCCTGGTGTTTACATTTGTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173886.2
CDS TCA 72 bp CAGGTGGAACACAAGTTTGTGCTTCTTGCCACCAGGTaGCTGAAGGATTCTAATTTACATTTGAGTTCATTT +
Preference number: 6 (lower is better)
Translates to: QVEHKFVLLATR*LKDSNLHLSSF
Trigger: AAATGAACTCAAATGTAAATTAGAATCCTTCAGTCACCTGGTGGCAAGAAGCACAAACTTGTGTTCCACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173886.2
CDS CAA 72 bp GAGGAACAGAACAACTTTCTTTTCGAGTCAGTGTTATaGTCTGCTATCTGTGGACCACTGAACTTAATTGGA +
Preference number: 6 (lower is better)
Translates to: EEQNNFLFESVL*SAICGPLNLIG
Trigger: TCCAATTAAGTTCAGTGGTCCACAGATAGCAGACAATAACACTGACTCGAAAAGAAAGTTGTTCTGTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173886.2
CDS CCA 72 bp CTTTCTTTTCGAGTCAGTGTTATTGTCTGCTATCTGTaGACCACTGAACTTAATTGGAATGTGGATGTTACT +
Preference number: 6 (lower is better)
Translates to: LSFRVSVIVCYL*TTELNWNVDVT
Trigger: AGTAACATCCACATTCCAATTAAGTTCAGTGGTCCACAGATAGCAGACAATAACACTGACTCGAAAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173886.2