Pregenerated sensors for VMN1R245 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096761

Ensembl transcript IDs: ENSMUST00000173886.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AACCAGTCAAGACTGGAGAGAAATTATGGACAAACAGAAAGACATTaGCCACAGTCCCAACCCCAAACTGGCAAAGCAAGAGAATCTGAA	+
Preference number: 5 (lower is better) Translates to: NQSRLERNYGQTERH*PQSQPQTGKARESE Trigger: TTCAGATTCTCTTGCTTTGCCAGTTTGGGGTTGGGACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173886.2
CDS TCA 90 bp	CTCAGGACACAGGTGGAACACAAGTTTGTGCTTCTTGCCACCAGGTaGCTGAAGGATTCTAATTTACATTTGAGTTCATTTGGAGGAGTT	+
Preference number: 5 (lower is better) Translates to: LRTQVEHKFVLLATR*LKDSNLHLSSFGGV Trigger: AACTCCTCCAAATGAACTCAAATGTAAATTAGAATCCTTCAGTCACCTGGTGGCAAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173886.2
CDS CCA 72 bp	AAGCTAACAAATGTAAACACCAGGATCAGGATAGTATaGGTTGCTTTGGACTCAGCTTGGCCTCTGGGGTTC	+
Preference number: 6 (lower is better) Translates to: KLTNVNTRIRIV*VALDSAWPLGF Trigger: GAACCCCAGAGGCCAAGCTGAGTCCAAAGCAACCCATACTATCCTGATCCTGGTGTTTACATTTGTTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173886.2
CDS TCA 72 bp	CAGGTGGAACACAAGTTTGTGCTTCTTGCCACCAGGTaGCTGAAGGATTCTAATTTACATTTGAGTTCATTT	+
Preference number: 6 (lower is better) Translates to: QVEHKFVLLATR*LKDSNLHLSSF Trigger: AAATGAACTCAAATGTAAATTAGAATCCTTCAGTCACCTGGTGGCAAGAAGCACAAACTTGTGTTCCACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173886.2
CDS CAA 72 bp	GAGGAACAGAACAACTTTCTTTTCGAGTCAGTGTTATaGTCTGCTATCTGTGGACCACTGAACTTAATTGGA	+
Preference number: 6 (lower is better) Translates to: EEQNNFLFESVL*SAICGPLNLIG Trigger: TCCAATTAAGTTCAGTGGTCCACAGATAGCAGACAATAACACTGACTCGAAAAGAAAGTTGTTCTGTTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173886.2
CDS CCA 72 bp	CTTTCTTTTCGAGTCAGTGTTATTGTCTGCTATCTGTaGACCACTGAACTTAATTGGAATGTGGATGTTACT	+
Preference number: 6 (lower is better) Translates to: LSFRVSVIVCYL*TTELNWNVDVT Trigger: AGTAACATCCACATTCCAATTAAGTTCAGTGGTCCACAGATAGCAGACAATAACACTGACTCGAAAAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173886.2