Pregenerated sensors for VMN1R242 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094757

Ensembl transcript IDs: ENSMUST00000168580.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATAAGTTTACCTTTACCTCTACTAACAGGAAAAAGAGTGACAAACTaGTGGATACTCAGGACACAGGTGGAACACAAGTTTGTGCTTCTT	+
Preference number: 5 (lower is better) Translates to: ISLPLPLLTGKRVTN*WILRTQVEHKFVLL Trigger: AAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGAGTATCCATCAGTTTGTCACTCTTTTTCCTGTTAGTAGAGGTAAAGGTAAACTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168580.2
CDS CAA 72 bp	AAGACTGGAGAGAAATTATGGACAAACAGAAAGACATaGGCCACAGTCCCAACCCCAAACTGGCAAAGCAAG	+
Preference number: 6 (lower is better) Translates to: KTGEKLWTNRKT*ATVPTPNWQSK Trigger: CTTGCTTTGCCAGTTTGGGGTTGGGACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168580.2
CDS CAA 72 bp	CTTGCCACCAGGCGACTGAAGGATTCTAATTTACATTaGAGTTCATTTGGAGGAGTTTTGGGAGCAAAAGCC	+
Preference number: 6 (lower is better) Translates to: LATRRLKDSNLH*SSFGGVLGAKA Trigger: GGCTTTTGCTCCCAAAACTCCTCCAAATGAACTCAAATGTAAATTAGAATCCTTCAGTCGCCTGGTGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168580.2
CDS CAA 72 bp	AAACCAACAACTGTAACAAGAATAACTCGCCAAATTTaGGACACTTGCTCTGAGTATAAGTTTACCTTTACC	+
Preference number: 6 (lower is better) Translates to: KPTTVTRITRQI*DTCSEYKFTFT Trigger: GGTAAAGGTAAACTTATACTCAGAGCAAGTGTCCAAAATTTGGCGAGTTATTCTTGTTACAGTTGTTGGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168580.2

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