RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R24 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000115507

Ensembl transcript IDs: ENSMUST00000228097.2, ENSMUST00000228315.2

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCCTGTCTGCCCTCTAACTGGTCCTCATCCAGTACCTCCTCCCTaGTCTCCAAGAGGATATCCCTATCCTACCAAACCTCCTCACTCT +
Preference number: 1 (lower is better)
Translates to: LPVCPLTGPHPVPPP*SPRGYPYPTKPPHS
Trigger: AGAGTGAGGAGGTTTGGTAGGATAGGGATATCCTCTTGGAGACCAGGGAGGAGGTACTGGATGAGGACCAGTTAGAGGGCAGACAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CCA 90 bp TTATTTACAGTCCACTTGTTACCCACTCCCTGTCTGCCCTCTAACTaGTCCTCATCCAGTACCTCCTCCCTGGTCTCCAAGAGGATATCC +
Preference number: 1 (lower is better)
Translates to: LFTVHLLPTPCLPSN*SSSSTSSLVSKRIS
Trigger: GGATATCCTCTTGGAGACCAGGGAGGAGGTACTGGATGAGGACCAGTTAGAGGGCAGACAGGGAGTGGGTAACAAGTGGACTGTAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR GCA 90 bp TATTTAATCTTTTATTTACAGTCCACTTGTTACCCACTCCCTGTCTaGCCTCTAACTGGTCCTCATCCAGTACCTCCTCCCTGGTCTCCA +
Preference number: 1 (lower is better)
Translates to: YLIFYLQSTCYPLPV*PLTGPHPVPPPWSP
Trigger: TGGAGACCAGGGAGGAGGTACTGGATGAGGACCAGTTAGAGGGCAGACAGGGAGTGGGTAACAAGTGGACTGTAAATAAAAGATTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR-3UTR CCA 90 bp GAGGGTGCTCCCACACCCACCCACCTACTCCTGCCTCACAGCCATAGCATTCCTCCAGTACCTCCTCCCTaGTCTCCAAGAGGATATCCC +
Preference number: 2 (lower is better)
Translates to: EGAPTPTHLLLPHSHSIPPVPPP*SPRGYP
Trigger: GGGATATCCTCTTGGAGACCAGGGAGGAGGTACTGG...AGGAATGCTATGGCTGTGAGGCAGGAGTAGGTGGGTGGGTGTGGGAGCACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR-3UTR CCA 90 bp CCTCATATGACCTCTGTGAGCACCAGGAATACACACATACAGACATGTCATAACTGTCTGCCCTCTAACTaGTCCTCATCCAGTACCTCC +
Preference number: 2 (lower is better)
Translates to: PHMTSVSTRNTHIQTCHNCLPSN*SSSSTS
Trigger: GGAGGTACTGGATGAGGACCAGTTAGAGGGCAGACA...GTTATGACATGTCTGTATGTGTGTATTCCTGGTGCTCACAGAGGTCATATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR-3UTR TCA 90 bp TATTATTTAATCTTTTATTTACAGTCCACTTGTTACCCACTCCCTGTCTGCCCTTGTCTCTTCTCTCACTaGAGCCAGACCAGGAAGACC +
Preference number: 2 (lower is better)
Translates to: YYLIFYLQSTCYPLPVCPCLFSH*SQTRKT
Trigger: GGTCTTCCTGGTCTGGCTTCAGTGAGAGAAGAGACA...AGGGCAGACAGGGAGTGGGTAACAAGTGGACTGTAAATAAAAGATTAAATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CAA 90 bp ATCTCATTATTATTATTATTATTTAATCTTTTATTTACAGTCCACTaGTTACCCACTCCCTGTCTGCCCTCTAACTGGTCCTCATCCAGT +
Preference number: 2 (lower is better)
Translates to: ISLLLLLFNLLFTVH*LPTPCLPSNWSSSS
Trigger: ACTGGATGAGGACCAGTTAGAGGGCAGACAGGGAGTGGGTAACAAGTGGACTGTAAATAAAAGATTAAATAATAATAATAATAATGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CCA 72 bp GTCCACTTGTTACCCACTCCCTGTCTGCCCTCTAACTaGTCCTCATCCAGTACCTCCTCCCTGGTCTCCAAG +
Preference number: 3 (lower is better)
Translates to: VHLLPTPCLPSN*SSSSTSSLVSK
Trigger: CTTGGAGACCAGGGAGGAGGTACTGGATGAGGACCAGTTAGAGGGCAGACAGGGAGTGGGTAACAAGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR GCA 72 bp TTTATGAGGGTGCTCCCACACCCACCCACCTACTCCTaGCTCACAGCCATAGCATTCCTCTACACTGGGGTA +
Preference number: 3 (lower is better)
Translates to: FMRVLPHPPTYS*LTAIAFLYTGV
Trigger: TACCCCAGTGTAGAGGAATGCTATGGCTGTGAGGCAGGAGTAGGTGGGTGGGTGTGGGAGCACCCTCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CCA 72 bp CTGACTCCTCCATTGGGGTCCCTGTGCTCAGACAGATaGTTGGCTGAGAGCATCCGCATCTGTATTAGTCAG +
Preference number: 3 (lower is better)
Translates to: LTPPLGSLCSDR*LAESIRICISQ
Trigger: CTGACTAATACAGATGCGGATGCTCTCAGCCAACCATCTGTCTGAGCACAGGGACCCCAATGGAGGAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CCA 72 bp CTACTCCTGCCTCACAGCCATAGCATTCCTCTACACTaGGGTATCAAGCTTTCACAGGACCCAGGGCCTCTT +
Preference number: 3 (lower is better)
Translates to: LLLPHSHSIPLH*GIKLSQDPGPL
Trigger: AAGAGGCCCTGGGTCCTGTGAAAGCTTGATACCCCAGTGTAGAGGAATGCTATGGCTGTGAGGCAGGAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR TCA 72 bp TCACGTCTCTCCAGGGTTAGGTGTCTCTTCTCTCACTaGAGCCAGACCAGGAAGACCTCTGCTGTATATATG +
Preference number: 3 (lower is better)
Translates to: SRLSRVRCLFSH*SQTRKTSAVYM
Trigger: CATATATACAGCAGAGGTCTTCCTGGTCTGGCTTCAGTGAGAGAAGAGACACCTAACCCTGGAGAGACGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR TCA 72 bp GTGTCTGGGTTTGGTGTCTACGTATGGGATGGATCATaGAGTGGGCAGTCTCTGGATGGCCTAAGTCACTTT +
Preference number: 3 (lower is better)
Translates to: VSGFGVYVWDGS*SGQSLDGLSHF
Trigger: AAAGTGACTTAGGCCATCCAGAGACTGCCCACTTCATGATCCATCCCATACGTAGACACCAAACCCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR GCA 72 bp TTTTATTTACAGTCCACTTGTTACCCACTCCCTGTCTaGCCTCTAACTGGTCCTCATCCAGTACCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: FYLQSTCYPLPV*PLTGPHPVPPP
Trigger: GGGAGGAGGTACTGGATGAGGACCAGTTAGAGGGCAGACAGGGAGTGGGTAACAAGTGGACTGTAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CCA 72 bp ATCAACAGTGTCTGGGTTTGGTGTCTACGTATGGGATaGATCATGAAGTGGGCAGTCTCTGGATGGCCTAAG +
Preference number: 3 (lower is better)
Translates to: INSVWVWCLRMG*IMKWAVSGWPK
Trigger: CTTAGGCCATCCAGAGACTGCCCACTTCATGATCCATCCCATACGTAGACACCAAACCCAGACACTGTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CCA 72 bp GGTCAGCAAGCACTTCTAGGCATCATCAACAGTGTCTaGGTTTGGTGTCTACGTATGGGATGGATCATGAAG +
Preference number: 3 (lower is better)
Translates to: GQQALLGIINSV*VWCLRMGWIMK
Trigger: CTTCATGATCCATCCCATACGTAGACACCAAACCCAGACACTGTTGATGATGCCTAGAAGTGCTTGCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR CCA 90 bp GAGGGTGCTCCCACACCCACCCACCTACTCCTGCCTCACAGCCATAGCATTCCTCTGATAGTGACAGCCTaGAATACACTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EGAPTPTHLLLPHSHSIPLIVTA*NTLRGQ
Trigger: CTGCCCCCTGAGTGTATTCCAGGCTGTCACTATCAG...AGGAATGCTATGGCTGTGAGGCAGGAGTAGGTGGGTGGGTGTGGGAGCACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CAA 72 bp CCTTCAGCTCCTTTAGTCCTTCCCCTGACTCCTCCATaGGGGTCCCTGTGCTCAGACAGATGGTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSAPLVLPLTPP*GSLCSDRWLAE
Trigger: CTCAGCCAACCATCTGTCTGAGCACAGGGACCCCAATGGAGGAGTCAGGGGAAGGACTAAAGGAGCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR TCA 90 bp CCCACACCCACCCACCTACTCCTGCCTCACAGCCATAGCATTCCTCTACACTGGTGCTGGCATTGCCTCTaGTGTCTGCACAAAAATACC +
Preference number: 4 (lower is better)
Translates to: PTPTHLLLPHSHSIPLHWCWHCL*CLHKNT
Trigger: GGTATTTTTGTGCAGACATCAGAGGCAATGCCAGCA...CCAGTGTAGAGGAATGCTATGGCTGTGAGGCAGGAGTAGGTGGGTGGGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR CCA 90 bp CCCACACCCACCCACCTACTCCTGCCTCACAGCCATAGCATTCCTCTACACTGGTTAGTGACCTTCATCTaGCTGGTCTCACTCAGATTG +
Preference number: 4 (lower is better)
Translates to: PTPTHLLLPHSHSIPLHWLVTFI*LVSLRL
Trigger: CAATCTGAGTGAGACCAGCCAGATGAAGGTCACTAA...CCAGTGTAGAGGAATGCTATGGCTGTGAGGCAGGAGTAGGTGGGTGGGTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CAA 72 bp ACTCCTCCATTGGGGTCCCTGTGCTCAGACAGATGGTaGGCTGAGAGCATCCGCATCTGTATTAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TPPLGSLCSDRW*AESIRICISQD
Trigger: ATCCTGACTAATACAGATGCGGATGCTCTCAGCCAACCATCTGTCTGAGCACAGGGACCCCAATGGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR TCA 90 bp CCCACACCCACCCACCTACTCCTGCCTCACAGCCATAGCATTCCTCTACACTGGTCATCCGAAGTGATTTaGACCAAAGGAGTTATTGTG +
Preference number: 4 (lower is better)
Translates to: PTPTHLLLPHSHSIPLHWSSEVI*TKGVIV
Trigger: CACAATAACTCCTTTGGTTCAAATCACTTCGGATGA...CCAGTGTAGAGGAATGCTATGGCTGTGAGGCAGGAGTAGGTGGGTGGGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR CCA 90 bp CTTCTTCCATTGATGCCAGATAAGGCCCCTTCAGCTCCTTTAGTCCTTCCCCTGAACAGTCAGGATGACTaGGTCATACCTCCACAACAG +
Preference number: 4 (lower is better)
Translates to: LLPLMPDKAPSAPLVLPLNSQDD*VIPPQQ
Trigger: CTGTTGTGGAGGTATGACCCAGTCATCCTGACTGTT...CAGGGGAAGGACTAAAGGAGCTGAAGGGGCCTTATCTGGCATCAATGGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR TCA 90 bp AGGCATCATCAACAGTGTCTGGGTTTGGTGTCTACGTATGGGATGGATCATGAAATGCTCTCAGGTGCCTaGTGCTATGAAGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHHQQCLGLVSTYGMDHEMLSGA*CYEDAG
Trigger: GCCAGCATCTTCATAGCATCAGGCACCTGAGAGCAT...TTCATGATCCATCCCATACGTAGACACCAAACCCAGACACTGTTGATGATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR TCA 90 bp TCATCCAGTACCTCCTCCCTGGTCTCCAAGAGGATATCCCTATCCTACCAAACCGTTCATGGGAAAGTGTaGGCAGTAATTAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: SSSTSSLVSKRISLSYQTVHGKV*AVISDL
Trigger: AAGGTCACTAATTACTGCTCACACTTTCCCATGAAC...GGTTTGGTAGGATAGGGATATCCTCTTGGAGACCAGGGAGGAGGTACTGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR TCA 90 bp ATCCAGTACCTCCTCCCTGGTCTCCAAGAGGATATCCCTATCCTACCAAACCTCTTCTTTCATCCGAAGTaGTTTGAACCAAAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: IQYLLPGLQEDIPILPNLFFHPK*FEPKEL
Trigger: TAACTCCTTTGGTTCAAATCACTTCGGATGAAAGAA...GAGGTTTGGTAGGATAGGGATATCCTCTTGGAGACCAGGGAGGAGGTACTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
3UTR CAA 72 bp CGCATCTGTATTAGTCAGGATCTTTTAGAGCCTTTTTaGAGACAGCTATACCAGGCTCTGGTCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: RICISQDLLEPF*RQLYQALVSKH
Trigger: GTGCTTGCTGACCAGAGCCTGGTATAGCTGTCTCAAAAAAGGCTCTAAAAGATCCTGACTAATACAGATGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR CCA 90 bp CTTCTTCCATTGATGCCAGATAAGGCCCCTTCAGCTCCTTTAGTCCTTCCCCTGCTTAGGACTGTGACATaGGATTGTGAAAATATAGAA +
Preference number: 4 (lower is better)
Translates to: LLPLMPDKAPSAPLVLPLLRTVT*DCENIE
Trigger: TTCTATATTTTCACAATCCCATGTCACAGTCCTAAG...CAGGGGAAGGACTAAAGGAGCTGAAGGGGCCTTATCTGGCATCAATGGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR CCA 90 bp AGATGGTTGGCTGAGAGCATCCGCATCTGTATTAGTCAGGATCTTTTAGAGCCTCCAACAGAGAAGAACTaGTTACTGCTGAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: RWLAESIRICISQDLLEPPTEKN*LLLKDK
Trigger: TTTGTCCTTCAGCAGTAACCAGTTCTTCTCTGTTGG...AGGCTCTAAAAGATCCTGACTAATACAGATGCGGATGCTCTCAGCCAACCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR CAA 90 bp CCCACACCCACCCACCTACTCCTGCCTCACAGCCATAGCATTCCTCTACACTGGGTGAATAAAAGTCAGTaGACAGGAGATCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: PTPTHLLLPHSHSIPLHWVNKSQ*TGDQVH
Trigger: GTGGACCTGATCTCCTGTCAACTGACTTTTATTCAC...CCAGTGTAGAGGAATGCTATGGCTGTGAGGCAGGAGTAGGTGGGTGGGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR CAA 90 bp TCATCCAGTACCTCCTCCCTGGTCTCCAAGAGGATATCCCTATCCTACCAAACCATGAAGATGCTGGCATaGCCTCTGATGTCTGCACAA +
Preference number: 5 (lower is better)
Translates to: SSSTSSLVSKRISLSYQTMKMLA*PLMSAQ
Trigger: TTGTGCAGACATCAGAGGCAATGCCAGCATCTTCAT...GGTTTGGTAGGATAGGGATATCCTCTTGGAGACCAGGGAGGAGGTACTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS-3UTR CAA 90 bp GGCATCATCAACAGTGTCTGGGTTTGGTGTCTACGTATGGGATGGATCATGAAGAATCCCCTTATAATGTaGTTCATGGGAAAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: GIINSVWVWCLRMGWIMKNPLIM*FMGKCE
Trigger: CTCACACTTTCCCATGAACAACATTATAAGGGGATT...CTTCATGATCCATCCCATACGTAGACACCAAACCCAGACACTGTTGATGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228097.2
CDS CAA 72 bp TCCAGTGAGGACCATAATTATGTGAATAAAAGTCAGTaGACAGGAGATCAGGTCCACAGGCTTAGGACTGTG +
Preference number: 6 (lower is better)
Translates to: SSEDHNYVNKSQ*TGDQVHRLRTV
Trigger: CACAGTCCTAAGCCTGTGGACCTGATCTCCTGTCAACTGACTTTTATTCACATAATTATGGTCCTCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000228097.2
ENSMUST00000228315.2
CDS TCA 72 bp AATCAATCCCCTTATAATGTTGTTCATGGGAAAGTGTaGGCAGTAATTAGTGACCTTCATCTGGCTGGTCTC +
Preference number: 6 (lower is better)
Translates to: NQSPYNVVHGKV*AVISDLHLAGL
Trigger: GAGACCAGCCAGATGAAGGTCACTAATTACTGCTCACACTTTCCCATGAACAACATTATAAGGGGATTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000228097.2
ENSMUST00000228315.2
CDS CCA 72 bp GATGTCTGCACAAAAATACCACCATGTATGAACTTGTaGTTAGCATCACGCCTACAAGAAACACATCTCTTA +
Preference number: 6 (lower is better)
Translates to: DVCTKIPPCMNL*LASRLQETHLL
Trigger: TAAGAGATGTGTTTCTTGTAGGCGTGATGCTAACCACAAGTTCATACATGGTGGTATTTTTGTGCAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000228097.2
ENSMUST00000228315.2