Pregenerated sensors for VMN1R236 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054142Ensembl transcript IDs: ENSMUST00000066998.5, ENSMUST00000235527.2, ENSMUST00000236545.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTaGATCTGGAGTTATATGCAGAGGTTAGCTAATGTGTGGAGGTAT | + |
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Preference number: 1 (lower is better) Translates to: HVFSAWGFQKRTWHP*IWSYMQRLANVWRY Trigger: ATACCTCCACACATTAGCTAACCTCTGCATATAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR GCA 90 bp | GAGAATCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTaGCCACTTTCTCCCTACCTATTCAACATTGTACTTGAAGTCCTA | + |
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Preference number: 1 (lower is better) Translates to: ENLEAIPLKSGTRQG*PLSPYLFNIVLEVL Trigger: TAGGACTTCAAGTACAATGTTGAATAGGTAGGGAGAAAGTGGGCAGCCTTGTCTAGTCCCTGATTTTAGTGGGATTGCTTCCAGATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR CCA 90 bp | TTTCATTCAGGAACCCAGAGCATTAGGGTGGGTATCAAGGAGTGCTaGTATCAGGATGATTTGAGTAGACATTTTTGGGTTCAGCAACAG | + |
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Preference number: 1 (lower is better) Translates to: FHSGTQSIRVGIKEC*YQDDLSRHFWVQQQ Trigger: CTGTTGCTGAACCCAAAAATGTCTACTCAAATCATCCTGATACCAGCACTCCTTGATACCCACCCTAATGCTCTGGGTTCCTGAATGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR TCA 90 bp | ACTTCAACTCTTGACTCTATGAGAGGAGTTCACATTCCTAACTGCTaGTCCATCTTCCCAGCACTGAAGAGATCAGTGTCCATGTTGATT | + |
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Preference number: 1 (lower is better) Translates to: TSTLDSMRGVHIPNC*SIFPALKRSVSMLI Trigger: AATCAACATGGACACTGATCTCTTCAGTGCTGGGAAGATGGATCAGCAGTTAGGAATGTGAACTCCTCTCATAGAGTCAAGAGTTGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR TCA 90 bp | TGCATCTCTCTCTCTCTCTCTGAACACATTCATCTGCATGCACAGTaGTATCATGATTACCTCCACCATGCCATGGTATTACTGCAATTA | + |
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Preference number: 1 (lower is better) Translates to: CISLSLSEHIHLHAQ*YHDYLHHAMVLLQL Trigger: TAATTGCAGTAATACCATGGCATGGTGGAGGTAATCATGATATCACTGTGCATGCAGATGAATGTGTTCAGAGAGAGAGAGAGAGATGCA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR CCA 90 bp | GCTTTAGATATTCACCTGTTGCTGATTCTGAAATCTTTTGCTTTGTaGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGATTGAAA | + |
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Preference number: 1 (lower is better) Translates to: ALDIHLLLILKSFAL*FSHSQIFHMCQGLK Trigger: TTTCAATCCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTCAGAATCAGCAACAGGTGAATATCTAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR GCA 90 bp | AAGGATGCAGGTGCATGTATTAGATCAGAGAACTTCTTTCTTTGGTaGCCTCTAGTTTTCACTGCAAACACCTTTACTTCTGTAAATAGA | + |
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Preference number: 1 (lower is better) Translates to: KDAGACIRSENFFLW*PLVFTANTFTSVNR Trigger: TCTATTTACAGAAGTAAAGGTGTTTGCAGTGAAAACTAGAGGGCACCAAAGAAAGAAGTTCTCTGATCTAATACATGCACCTGCATCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR CCA 90 bp | AAATTGTTGTGGAATTGGTGTAATGCTGCTTACATTATTTTAATTTaGTCCCTCCAAATTATAGGAGACCCCAAAGGATGGAACACAAGA | + |
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Preference number: 1 (lower is better) Translates to: KLLWNWCNAAYIILI*SLQIIGDPKGWNTR Trigger: TCTTGTGTTCCATCCTTTGGGGTCTCCTATAATTTGGAGGGACCAAATTAAAATAATGTAAGCAGCATTACACCAATTCCACAACAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR CCA 90 bp | GACCAAGTAGGCTTCATCCCAGGGATTCAGGGATGGTTTAATATATaGAAATTCATCAACGAAATCCACTATTTAAACAAACTTAAAACA | + |
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Preference number: 1 (lower is better) Translates to: DQVGFIPGIQGWFNI*KFINEIHYLNKLKT Trigger: TGTTTTAAGTTTGTTTAAATAGTGGATTTCGTTGATGAATTTCCATATATTAAACCATCCCTGAATCCCTGGGATGAAGCCTACTTGGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACATTCCTAACTGCTaGTCCATCTTCCCAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWHIPNC*SIFPAL Trigger: CAGTGCTGGGAAGATGGATCAGCAGTTAGGAATGTG...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGGCAATCAGTCTAAGTaGGCTGCAGTTCTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGGNQSK*AAVLGP Trigger: AGGACCCAGAACTGCAGCTCACTTAGACTGATTGCC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGTCCTCCAGGATAACATaGCAGATGGCACCAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGSSRIT*QMAPSV Trigger: GACACTTGGTGCCATCTGGCATGTTATCCTGGAGGA...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGCATGTGTTCAGTGCCTaGGGATTCCAGAAGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGHVFSA*GFQKRT Trigger: TGTCCTCTTCTGGAATCCCCAGGCACTGAACACATG...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCAACTCTTGACTCTATaGGAGGAGTTCACATTCCTA | + |
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Preference number: 2 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWQLLTL*EEFTFL Trigger: TAGGAATGTGAACTCCTCTCATAGAGTCAAGAGTTG...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTAACTAAATGGATATGTTaGCTATTTCTGGGTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: VQCLGIPEEDMAPLNLELTKWIC*LFLGVS Trigger: TGACACACCCAGAAATAGGCAACATATCCATTTAGT...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGTGCACAGTGATATCATaGTTACCTCCACCATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGCTVIS*LPPPCH Trigger: ATGGCATGGTGGAGGTAATCATGATATCACTGTGCA...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGTTTCACTTCAACTCTTaGCTCTATGAGAGGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWFHFNS*LYERSS Trigger: TGAACTCCTCTCATAGAGTCAAGAGTTGAAGTGAAA...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGTTTCTGGGGAGACACTaGGAAAGTTCCCATATCACA | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGFLGRH*ESSHIT Trigger: TGTGATATGGGAACTTTCTCAGTGTCTCCCCAGAAA...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGACACTACAGTTTCCCTaGAACGGAAAACAGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGTLQFP*NGKQHA Trigger: TGCATGCTGTTTTCCGTTTCAGGGAAACTGTAGTGT...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTGATCAAAGTTAGTGGGAACATGGTTCATGAGATCTCACATGGAAAGACATCCTCCAGGATAACATaGCAGATGGCACCAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: DVIKVSGNMVHEISHGKTSSRIT*QMAPSV Trigger: GACACTTGGTGCCATCTGGCATGTTATCCTGGAGGA...TGTCTTTCCATGTGAGATCTCATGAACCATGTTCCCACTAACTTTGATCACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGTACCAAGTGTTCTGTaGACTCTACACCACCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGVPSVL*TLHHQN Trigger: ATTCTGGTGGTGTAGAGTGCACAGAACACTTGGTAC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGTGGGTATCAAGGAGTaGTGGTATCAGGATGATTTG | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGVGIKE*WYQDDL Trigger: CAAATCATCCTGATACCAGCACTCCTTGATACCCAC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGTATGTTGCCTATTTCTaGGTGTGTCACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGYVAYF*VCHTHT Trigger: TGTGTGTGTGTGACACACCCAGAAATAGGCAACATA...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGCCCCTAAATTGTTGTaGAATTGGTGTAATGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGAPKLL*NWCNAA Trigger: AGCAGCATTACACCAATTCCACAACAATTTAGGGGC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGATAGAGTGTGAGGTTTaGCAACTTGAGAGAGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGIECEV*QLERVN Trigger: ATTGACTCTCTCAAGTTGTCAAACCTCACACTCTAT...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGGTATCAGGATGATTTaGGTAGACATTTTTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGGIRMI*VDIFGF Trigger: GAACCCAAAAATGTCTACTCAAATCATCCTGATACC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGCCCTCCAGAAAATACTaGATAAGCCTGAATAATTCC | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGPSRKY*ISLNNS Trigger: GGAATTATTCAGGCTTATGCAGTATTTTCTGGAGGG...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGACTGCTATTTTTGACTaGACACTCTTGTCAAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGTAIFD*TLLSSC Trigger: GCAACTTGACAAGAGTGTGCAGTCAAAAATAGCAGT...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGGGCCTCTTGTGTATTaGAATGTGTTGTACATATAT | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGGPLVY*NVLYIY Trigger: ATATATGTACAACACATTTCAATACACAAGAGGCCC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTACACATTCCTAACTGCTaGTCCATCTTCCCAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: LERVNERFQYQDQNYSFVHIPNC*SIFPAL Trigger: CAGTGCTGGGAAGATGGATCAGCAGTTAGGAATGTG...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GATGTGATCAAAGTTAGTGGGAACATGGTTCATGAGATCTCACATGGAAAGACACAACTCTTGACTCTATaGGAGGAGTTCACATTCCTA | + |
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Preference number: 2 (lower is better) Translates to: DVIKVSGNMVHEISHGKTQLLTL*EEFTFL Trigger: TAGGAATGTGAACTCCTCTCATAGAGTCAAGAGTTG...TGTCTTTCCATGTGAGATCTCATGAACCATGTTCCCACTAACTTTGATCACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGTTCCTAGTTGGTTTTaGTTGGTAAATAAAGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGVPSWF*LVNKVA Trigger: GGCAACTTTATTTACCAATCAAAACCAACTAGGAAC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | GATGTGATCAAAGTTAGTGGGAACATGGTTCATGAGATCTCACATGGAAAGACATGTAGAAAATTTATTTaGGCCATGAGTGGGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: DVIKVSGNMVHEISHGKTCRKFI*AMSGPL Trigger: AAGAGGCCCACTCATGGCTCAAATAAATTTTCTACA...TGTCTTTCCATGTGAGATCTCATGAACCATGTTCCCACTAACTTTGATCACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTAAGGACATGGCACCCTTaGATCTGGAGTTATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: LERVNERFQYQDQNYSFVRTWHP*IWSYMQ Trigger: CTGCATATAACTCCAGATTCAAGGGTGCCATGTCCT...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAAGGACATGGCACCCTTaGATCTGGAGTTATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIRTWHP*IWSYMQ Trigger: CTGCATATAACTCCAGATTCAAGGGTGCCATGTCCT...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATATACTCATGTGTTCAGTaGCTGGGGATTCCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIYSCVQ*LGIPEE Trigger: CTCTTCTGGAATCCCCAGGCACTGAACACATGAGTA...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAAGAAGAGAATGTGGGTaGAGGGGCAATCAGTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIRRECG*RGNQSK Trigger: CTTAGACTGATTGCCCCTGCACCCACATTCTCTTCT...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTATGCACAGTGATATCATaGTTACCTCCACCATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: LERVNERFQYQDQNYSFVCTVIS*LPPPCH Trigger: ATGGCATGGTGGAGGTAATCATGATATCACTGTGCA...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTACATCTGCATGCACAGTaGTATCATGATTACCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LERVNERFQYQDQNYSFVHLHAQ*YHDYLH Trigger: GTGGAGGTAATCATGATATCACTGTGCATGCAGATG...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATATTTCTGGGGAGACACTaGGAAAGTTCCCATATCACA | + |
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Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIFLGRH*ESSHIT Trigger: TGTGATATGGGAACTTTCTCAGTGTCTCCCCAGAAA...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTAACAGCAGAGCAGATGTaGTCAAAGTTAGTGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: LERVNERFQYQDQNYSFVTAEQM*SKLVGT Trigger: TGTTCCCACTAACTTTGATCACATCTGCTCTGCTGT...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAGTACCAAGTGTTCTGTaGACTCTACACCACCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIVPSVL*TLHHQN Trigger: ATTCTGGTGGTGTAGAGTGCACAGAACACTTGGTAC...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTATATGTTGCCTATTTCTaGGTGTGTCACACACACACA | + |
|
Preference number: 2 (lower is better) Translates to: LERVNERFQYQDQNYSFVYVAYF*VCHTHT Trigger: TGTGTGTGTGTGACACACCCAGAAATAGGCAACATA...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAGAAGTGGTCCAGCCCTaGACTTGTTTAAAGCATATT | + |
|
Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIEVVQP*TCLKHI Trigger: AATATGCTTTAAACAAGTCCAGGGCTGGACCACTTC...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAGCCCCTAAATTGTTGTaGAATTGGTGTAATGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIAPKLL*NWCNAA Trigger: AGCAGCATTACACCAATTCCACAACAATTTAGGGGC...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTATTTCACTTCAACTCTTaGCTCTATGAGAGGAGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LERVNERFQYQDQNYSFVFHFNS*LYERSS Trigger: TGAACTCCTCTCATAGAGTCAAGAGTTGAAGTGAAA...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAATAGAGTGTGAGGTTTaGCAACTTGAGAGAGTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIIECEV*QLERVN Trigger: ATTGACTCTCTCAAGTTGTCAAACCTCACACTCTAT...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATACCCAGAAGTCATGCTTaGGGCAGAAGATATTATATT | + |
|
Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIPRSHA*GRRYYI Trigger: AATATAATATCTTCTGCCTCAAGCATGACTTCTGGG...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATATCCAGAAGGCAAGTTTaGGCCTCATTATTTTACATT | + |
|
Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTISRRQV*ASLFYI Trigger: AATGTAAAATAATGAGGCCCAAACTTGCCTTCTGGA...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATACCAATATATAGTTTCTaGGGAGACACTGAGAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TKDKQDEKEIRATTPFTIPIYSF*GDTEKV Trigger: AACTTTCTCAGTGTCTCCCCAGAAACTATATATTGG...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CCA 72 bp | GGTGCAGGGGCAATCAGTCTAAGTGAGCTGCAGTTCTaGGTCCTGGGTAGCGACAATGGAATATGGGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GAGAISLSELQF*VLGSDNGIWVL Trigger: TAAAACCCATATTCCATTGTCGCTACCCAGGACCCAGAACTGCAGCTCACTTAGACTGATTGCCCCTGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGGAAGTGGACAGCTGTaGTGTGGTGAAAGAGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGGSGQL*CGERVD Trigger: GTCTACTCTTTCACCACACAACAGCTGTCCACTTCC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR TCA 72 bp | CCGATTCCAAGAACACATCGAAATGATCATCCATCATaGCCAAGTAGGCTTCATCCCAGGGATTCAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PIPRTHRNDHPS*PSRLHPRDSGM Trigger: CATCCCTGAATCCCTGGGATGAAGCCTACTTGGTCATGATGGATGATCATTTCGATGTGTTCTTGGAATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR GCA 72 bp | TTAAGAAAGCGAAGAACATTGTACTCATGTGTTCAGTaGCTGGGGATTCCAGAAGAGGACATGGCACCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LRKRRTLYSCVQ*LGIPEEDMAPL Trigger: CAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTCGCTTTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGACAAGGTATCACAAATaGCATCTCTCTCTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWTRYHK*HLSLSL Trigger: GAGAGAGAGAGAGAGATGCAATTTGTGATACCTTGT...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR GCA 72 bp | TCAGGAACCCAGAGCATTAGGGTGGGTATCAAGGAGTaGTGGTATCAGGATGATTTGAGTAGACATTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SGTQSIRVGIKE*WYQDDLSRHFW Trigger: CCAAAAATGTCTACTCAAATCATCCTGATACCAGCACTCCTTGATACCCACCCTAATGCTCTGGGTTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CCA 72 bp | GGAACCCAGAGCATTAGGGTGGGTATCAAGGAGTGCTaGTATCAGGATGATTTGAGTAGACATTTTTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GTQSIRVGIKEC*YQDDLSRHFWV Trigger: AACCCAAAAATGTCTACTCAAATCATCCTGATACCAGCACTCCTTGATACCCACCCTAATGCTCTGGGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR TCA 72 bp | ATCTGCATAGGTACAGTGAGGACAGCAGAGCAGATGTaGTCAAAGTTAGTGGGAACATGGTTCATGAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: ICIGTVRTAEQM*SKLVGTWFMRS Trigger: AGATCTCATGAACCATGTTCCCACTAACTTTGATCACATCTGCTCTGCTGTCCTCACTGTACCTATGCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGACAAGGTATCACAAATaGCATCTCTCTCTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGTRYHK*HLSLSL Trigger: GAGAGAGAGAGAGAGATGCAATTTGTGATACCTTGT...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGCCTCCATGTTTTTATTaGATACAGGAGGGAATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGPPCFY*IQEGIQ Trigger: CTGGATTCCCTCCTGTATCAAATAAAAACATGGAGG...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGATGAGTTGGGGTTATaGGAAAGTACATCAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGDELGL*ESTSDM Trigger: CATGTCTGATGTACTTTCCAATAACCCCAACTCATC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGCAAAGCTGTCATCATTaGGTCAGCTTTCTAGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGQSCHH*VSFLDL Trigger: CAGATCTAGAAAGCTGACCAAATGATGACAGCTTTG...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR TCA 72 bp | CTCTCTCTCTCTGAACACATTCATCTGCATGCACAGTaGTATCATGATTACCTCCACCATGCCATGGTATTA | + |
|
Preference number: 3 (lower is better) Translates to: LSLSEHIHLHAQ*YHDYLHHAMVL Trigger: TAATACCATGGCATGGTGGAGGTAATCATGATATCACTGTGCATGCAGATGAATGTGTTCAGAGAGAGAGAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CCA 72 bp | ATGCACAGTGATATCATGATTACCTCCACCATGCCATaGTATTACTGCAATTATGCTCACAGTTCTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MHSDIMITSTMP*YYCNYAHSSVR Trigger: TCTGACAGAACTGTGAGCATAATTGCAGTAATACCATGGCATGGTGGAGGTAATCATGATATCACTGTGCAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CCA 72 bp | GCAGGTGCATGTATTAGATCAGAGAACTTCTTTCTTTaGTGCCCTCTAGTTTTCACTGCAAACACCTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: AGACIRSENFFL*CPLVFTANTFT Trigger: AGTAAAGGTGTTTGCAGTGAAAACTAGAGGGCACCAAAGAAAGAAGTTCTCTGATCTAATACATGCACCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CCA 72 bp | CATGACCAAGTAGGCTTCATCCCAGGGATTCAGGGATaGTTTAATATATGGAAATTCATCAACGAAATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HDQVGFIPGIQG*FNIWKFINEIH Trigger: GTGGATTTCGTTGATGAATTTCCATATATTAAACCATCCCTGAATCCCTGGGATGAAGCCTACTTGGTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGATATCACAGAGCATGTaGATTAAGAAAGCGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGISQSM*IKKAKN Trigger: GTTCTTCGCTTTCTTAATCAACATGCTCTGTGATAT...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGTGGTATCAGGATGATTaGAGTAGACATTTTTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGWYQDD*SRHFWV Trigger: AACCCAAAAATGTCTACTCAAATCATCCTGATACCA...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR GCA 72 bp | GATATCATGATTACCTCCACCATGCCATGGTATTACTaGAATTATGCTCACAGTTCTGTCAGAATGACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: DIMITSTMPWYY*NYAHSSVRMTD Trigger: ATCAGTCATTCTGACAGAACTGTGAGCATAATTGCAGTAATACCATGGCATGGTGGAGGTAATCATGATATC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CCA 72 bp | AATCTACAGCAAACCAGTAGCCAACATCAAACTAAATaGAGAGAATCTGGAAGCAATCCCACTAAAATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NLQQTSSQHQTK*RESGSNPTKIR Trigger: CCTGATTTTAGTGGGATTGCTTCCAGATTCTCTCCATTTAGTTTGATGTTGGCTACTGGTTTGCTGTAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR TCA 72 bp | CATTTGGTCAGCTTTCTAGATCTGTCCACTGTTTTATaGAATATGATCCTTGCCAGCTGTTCCTATCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HLVSFLDLSTVL*NMILASCSYPK Trigger: TTTTGGATAGGAACAGCTGGCAAGGATCATATTTCATAAAACAGTGGACAGATCTAGAAAGCTGACCAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATACCTCCATGTTTTTATTaGATACAGGAGGGAATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TKDKQDEKEIRATTPFTIPPCFY*IQEGIQ Trigger: CTGGATTCCCTCCTGTATCAAATAAAAACATGGAGG...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAAATAGTCATGTGCATTaGCCCACTTCCAGAGTTATG | + |
|
Preference number: 3 (lower is better) Translates to: TKDKQDEKEIRATTPFTINSHVH*PTSRVM Trigger: CATAACTCTGGAAGTGGGCAAATGCACATGACTATT...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATACCCCAGAAGTCATGCTaGAGGCAGAAGATATTATAT | + |
|
Preference number: 3 (lower is better) Translates to: TKDKQDEKEIRATTPFTIPQKSC*RQKILY Trigger: ATATAATATCTTCTGCCTCAAGCATGACTTCTGGGG...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAATCCAGAAGGCAAGTTaGGGCCTCATTATTTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: TKDKQDEKEIRATTPFTIIQKAS*GLIILH Trigger: ATGTAAAATAATGAGGCCCAAACTTGCCTTCTGGAT...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATACACATGTGCCAGGGATaGAAAAGTATTTTCTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TKDKQDEKEIRATTPFTIHMCQG*KSIFSC Trigger: ACATGAGAAAATACTTTTCAATCCCTGGCACATGTG...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTAATATCACAGAGCATGTaGATTAAGAAAGCGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LERVNERFQYQDQNYSFVISQSM*IKKAKN Trigger: GTTCTTCGCTTTCTTAATCAACATGCTCTGTGATAT...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR GCA 72 bp | TTTAGATATTCACCTGTTGCTGATTCTGAAATCTTTTaGTTTGTGGTTCTCACACTCCCAAATTTTCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: FRYSPVADSEIF*FVVLTLPNFPH Trigger: ATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTCAGAATCAGCAACAGGTGAATATCTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR TCA 72 bp | AGATCTATATCCAATGTAGAAAATTTATTTGAGCCATaGGTGGGCCTCTTGTGTATTGAAATGTGTTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: RSISNVENLFEP*VGLLCIEMCCT Trigger: TGTACAACACATTTCAATACACAAGAGGCCCACTCATGGCTCAAATAAATTTTCTACATTGGATATAGATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTAGAGAGTCTTGGCTCATaGGAAGAAAGGGACAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VQCLGIPEEDMAPLNLELESLGS*EERDKQ Trigger: CTGTTTGTCCCTTTCTTCTCATGAGCCAAGACTCTC...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGCACTGGCCCATAGCATaGGCCCCAGCAAAAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGHWPIA*APAKAL Trigger: AAGTGCTTTTGCTGGGGCTCATGCTATGGGCCAGTG...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTAATCTTTAAACCCAAATaGGGATATTGTCTGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VQCLGIPEEDMAPLNLELIFKPK*GYCLGH Trigger: GTGCCCCAGACAATATCCTCATTTGGGTTTAAAGAT...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTATTCATTGCCATATCTTaGCCTCATATGCACAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VQCLGIPEEDMAPLNLELFIAIS*PHMHKI Trigger: AATCTTGTGCATATGAGGGCAAGATATGGCAATGAA...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGATGTATTGCATCATCTaGTTGTGCCTGTACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWMYCII*LCLYSV Trigger: CACACTGTACAGGCACAAGCAGATGATGCAATACAT...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CAA 72 bp | GATGAGTTGGGGTTATTGGAAAGTACATCAGACATGTaGAGGTTAGGAAGTGGTCCAGCCCTGGACTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DELGLLESTSDM*RLGSGPALDLF Trigger: AAACAAGTCCAGGGCTGGACCACTTCCTAACCTCAACATGTCTGATGTACTTTCCAATAACCCCAACTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGAGTGGTATAGAAGAGTaGCATTCCCTAGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWSGIEE*HSLEFQ Trigger: TTGGAATTCTAGGGAATGTCACTCTTCTATACCACT...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTAACACAGAACAACAAATaGACTTGTGTGTTCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VQCLGIPEEDMAPLNLELTQNNK*TCVFLL Trigger: AAGTAAGAACACACAAGTGCATTTGTTGTTCTGTGT...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTAACTTCAGATTTGTTGTaGTTTCATTGCCATATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQCLGIPEEDMAPLNLELTSDLL*FHCHIL Trigger: CAAGATATGGCAATGAAAGCACAACAAATCTGAAGT...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | CACAAGGTATCACAAATTGCATCTCTCTCTCTCTCTCTGAACACATTCATCTGCGTCCTGGACATGTATTaGATCATCTGCTTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKVSQIASLSLSLNTFICVLDMY*IICLCL Trigger: CAGGCACAAGCAGATGATGCAATACATGTCCAGGAC...GCAGATGAATGTGTTCAGAGAGAGAGAGAGAGATGCAATTTGTGATACCTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGCTGATGATGATGGCCTaGAACACACTAAGAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGLMMMA*NTLRNE Trigger: CTCATTTCTTAGTGTGTTTCAGGCCATCATCATCAG...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTACACTGGCCCATAGCATaGGCCCCAGCAAAAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LERVNERFQYQDQNYSFVHWPIA*APAKAL Trigger: AAGTGCTTTTGCTGGGGCTCATGCTATGGGCCAGTG...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGTTCATTGCCATATCTTaGCCTCATATGCACAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWFIAIS*PHMHKI Trigger: AATCTTGTGCATATGAGGGCAAGATATGGCAATGAA...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGTTGTTGTGCTTTCATTaGCATATCTTGCCCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWLLCFH*HILPSY Trigger: ATATGAGGGCAAGATATGGCAATGAAAGCACAACAA...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGACACAGAACAACAAATaGACTTGTGTGTTCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWTQNNK*TCVFLL Trigger: AAGTAAGAACACACAAGTGCATTTGTTGTTCTGTGT...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | CACAAGGTATCACAAATTGCATCTCTCTCTCTCTCTCTGAACACATTCATCTGCTATCTTGCCCTCATATaGACAAGATTCACGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKVSQIASLSLSLNTFICYLALI*TRFTLL Trigger: AAGCAGCGTGAATCTTGTGCATATGAGGGCAAGATA...GCAGATGAATGTGTTCAGAGAGAGAGAGAGAGATGCAATTTGTGATACCTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CCA 90 bp | CACAAGGTATCACAAATTGCATCTCTCTCTCTCTCTCTGAACACATTCATCTGCCATAAAGGATATCACTaGTTGGATCATGACGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HKVSQIASLSLSLNTFICHKGYH*LDHDGQ Trigger: CTGTCCGTCATGATCCAACCAGTGATATCCTTTATG...GCAGATGAATGTGTTCAGAGAGAGAGAGAGAGATGCAATTTGTGATACCTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGGTATCACAAATTGCATCTCTCTCTCTCTCTCTGAACACATTCATCTGCAGAGCTCCAAAGGATTaGCAAACAGAAGAAATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HKVSQIASLSLSLNTFICRAPKD*QTEEIV Trigger: CACAATTTCTTCTGTTTGTCAATCCTTTGGAGCTCT...GCAGATGAATGTGTTCAGAGAGAGAGAGAGAGATGCAATTTGTGATACCTTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | CACAAGGTATCACAAATTGCATCTCTCTCTCTCTCTCTGAACACATTCATCTGCAAGCAGAGAGGACATTaGAGTAATATTCACCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HKVSQIASLSLSLNTFICKQRGH*SNIHQR Trigger: TCTCTGGTGAATATTACTGCAATGTCCTCTCTGCTT...GCAGATGAATGTGTTCAGAGAGAGAGAGAGAGATGCAATTTGTGATACCTTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CCA 90 bp | GATGTGATCAAAGTTAGTGGGAACATGGTTCATGAGATCTCACATGGAAAGACAGACCTGACAGTAATGTaGCATAAAGGATATCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVIKVSGNMVHEISHGKTDLTVM*HKGYHW Trigger: CCAGTGATATCCTTTATGCCACATTACTGTCAGGTC...TGTCTTTCCATGTGAGATCTCATGAACCATGTTCCCACTAACTTTGATCACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTAGTCCTGGACATGTATTaGATCATCTGCTTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LERVNERFQYQDQNYSFVVLDMY*IICLCL Trigger: CAGGCACAAGCAGATGATGCAATACATGTCCAGGAC...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CAA 72 bp | GATATTCACCTGTTGCTGATTCTGAAATCTTTTGCTTaGTGGTTCTCACACTCCCAAATTTTCCACATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DIHLLLILKSFA*WFSHSQIFHMC Trigger: GCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTCAGAATCAGCAACAGGTGAATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CAA 72 bp | GACATGTTGAGGTTAGGAAGTGGTCCAGCCCTGGACTaGTTTAAAGCATATTTAAATATAAAGGCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DMLRLGSGPALD*FKAYLNIKAVF Trigger: AAACACAGCCTTTATATTTAAATATGCTTTAAACAAGTCCAGGGCTGGACCACTTCCTAACCTCAACATGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTAATCTTTAAACCCAAATaGGGATATTGTCTGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LERVNERFQYQDQNYSFVIFKPK*GYCLGH Trigger: GTGCCCCAGACAATATCCTCATTTGGGTTTAAAGAT...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | GATGTGATCAAAGTTAGTGGGAACATGGTTCATGAGATCTCACATGGAAAGACAACTTCAGATTTGTTGTaGTTTCATTGCCATATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DVIKVSGNMVHEISHGKTTSDLL*FHCHIL Trigger: CAAGATATGGCAATGAAAGCACAACAAATCTGAAGT...TGTCTTTCCATGTGAGATCTCATGAACCATGTTCCCACTAACTTTGATCACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTAATGTATTGCATCATCTaGTTGTGCCTGTACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LERVNERFQYQDQNYSFVMYCII*LCLYSV Trigger: CACACTGTACAGGCACAAGCAGATGATGCAATACAT...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATACATAAAGGATATCACTaGTTGGATCATGACGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TKDKQDEKEIRATTPFTIHKGYH*LDHDGQ Trigger: CTGTCCGTCATGATCCAACCAGTGATATCCTTTATG...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAGACCTGACAGTAATGTaGCATAAAGGATATCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKDKQDEKEIRATTPFTIDLTVM*HKGYHW Trigger: CCAGTGATATCCTTTATGCCACATTACTGTCAGGTC...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CAA 72 bp | TCTAGAAATGACTTGATGCAAAATAGTCATGTGCATTaGCCCACTTCCAGAGTTATGTGTTCAAAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRNDLMQNSHVH*PTSRVMCSKHL Trigger: CAGATGTTTTGAACACATAACTCTGGAAGTGGGCAAATGCACATGACTATTTTGCATCAAGTCATTTCTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTAAGTGGTATAGAAGAGTaGCATTCCCTAGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LERVNERFQYQDQNYSFVSGIEE*HSLEFQ Trigger: TTGGAATTCTAGGGAATGTCACTCTTCTATACCACT...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTAAGAGCTCCAAAGGATTaGCAAACAGAAGAAATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LERVNERFQYQDQNYSFVRAPKD*QTEEIV Trigger: CACAATTTCTTCTGTTTGTCAATCCTTTGGAGCTCT...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATAAAGCAGAGAGGACATTaGAGTAATATTCACCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKDKQDEKEIRATTPFTIKQRGH*SNIHQR Trigger: TCTCTGGTGAATATTACTGCAATGTCCTCTCTGCTT...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTATTGTTGTGCTTTCATTaGCATATCTTGCCCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LERVNERFQYQDQNYSFVLLCFH*HILPSY Trigger: ATATGAGGGCAAGATATGGCAATGAAAGCACAACAA...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| 3UTR CAA 72 bp | ATTTCCACTAGCCAACCTAAATCCTCCATATGCAAATaGAAGGTTAGAATATTTTTCTGGGTTTTAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISTSQPKSSICK*KVRIFFWVLEL Trigger: CAACTCTAAAACCCAGAAAAATATTCTAACCTTCAATTTGCATATGGAGGATTTAGGTTGGCTAGTGGAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTAGGAAATCCGAGAGTCTaGGCTCATGAGAAGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VQCLGIPEEDMAPLNLELGNPRV*AHEKKG Trigger: CCCTTTCTTCTCATGAGCCAAGACTCTCGGATTTCC...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTAACCCAAATGAGGATATaGTCTGGGGCACTCCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VQCLGIPEEDMAPLNLELTQMRI*SGALLY Trigger: GTAAAGGAGTGCCCCAGACAATATCCTCATTTGGGT...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTATTTGTTGTGCTTTCATaGCCATATCTTGCCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: VQCLGIPEEDMAPLNLELFVVLS*PYLALI Trigger: TATGAGGGCAAGATATGGCAATGAAAGCACAACAAA...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGCACCCTTGAATCTGGAGTTAGAGAGCTCCAAAGGATaGACAAACAGAAGAAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: VQCLGIPEEDMAPLNLELESSKG*TNRRNC Trigger: ACAATTTCTTCTGTTTGTCAATCCTTTGGAGCTCTC...TAACTCCAGATTCAAGGGTGCCATGTCCTCTTCTGGAATCCCCAGGCACTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGGGAAATCCGAGAGTCTaGGCTCATGAGAAGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGGNPRV*AHEKKG Trigger: CCCTTTCTTCTCATGAGCCAAGACTCTCGGATTTCC...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTTTGCTTTGTGGTTCTCACACTCCCAAATTTTCCACATGTGCCAGGGTATTGCATCATCTGCTaGTGCCTGTACAGTGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EIFCFVVLTLPNFPHVPGYCIIC*CLYSVR Trigger: TCTCACACTGTACAGGCACAAGCAGATGATGCAATA...CCCTGGCACATGTGGAAAATTTGGGAGTGTGAGAACCACAAAGCAAAAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAACATTGTACTCATGTGTTCAGTGCCTGGGGATTCCAGAAGAGGACATGGGAGAGCTCCAAAGGATaGACAAACAGAAGAAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: EEHCTHVFSAWGFQKRTWESSKG*TNRRNC Trigger: ACAATTTCTTCTGTTTGTCAATCCTTTGGAGCTCTC...CCATGTCCTCTTCTGGAATCCCCAGGCACTGAACACATGAGTACAATGTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | CACAAGGTATCACAAATTGCATCTCTCTCTCTCTCTCTGAACACATTCATCTGCTATTGCATCATCTGCTaGTGCCTGTACAGTGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HKVSQIASLSLSLNTFICYCIIC*CLYSVR Trigger: TCTCACACTGTACAGGCACAAGCAGATGATGCAATA...GCAGATGAATGTGTTCAGAGAGAGAGAGAGAGATGCAATTTGTGATACCTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | CACAAGGTATCACAAATTGCATCTCTCTCTCTCTCTCTGAACACATTCATCTGCTTTCATTGCCATATCTaGCCCTCATATGCACAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HKVSQIASLSLSLNTFICFHCHI*PSYAQD Trigger: ATCTTGTGCATATGAGGGCAAGATATGGCAATGAAA...GCAGATGAATGTGTTCAGAGAGAGAGAGAGAGATGCAATTTGTGATACCTTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | CTTGAGAGAGTCAATGAAAGGTTTCAGTACCAAGATCAAAACTACTCTTTTGTAGGTCCTGGACATGTATaGCATCATCTGCTTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LERVNERFQYQDQNYSFVGPGHV*HHLLVP Trigger: AGGCACAAGCAGATGATGCAATACATGTCCAGGACC...TACAAAAGAGTAGTTTTGATCTTGGTACTGAAACCTTTCATTGACTCTCTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | GATGTGATCAAAGTTAGTGGGAACATGGTTCATGAGATCTCACATGGAAAGACATTTCATTGCCATATCTaGCCCTCATATGCACAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DVIKVSGNMVHEISHGKTFHCHI*PSYAQD Trigger: ATCTTGTGCATATGAGGGCAAGATATGGCAATGAAA...TGTCTTTCCATGTGAGATCTCATGAACCATGTTCCCACTAACTTTGATCACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGATAAACAGGATGAAAAAGAAATTAGGGCAACAACACCCTTCACAATATTTGTTGTGCTTTCATaGCCATATCTTGCCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: TKDKQDEKEIRATTPFTIFVVLS*PYLALI Trigger: TATGAGGGCAAGATATGGCAATGAAAGCACAACAAA...TATTGTGAAGGGTGTTGTTGCCCTAATTTCTTTTTCATCCTGTTTATCCTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS CAA 72 bp | GGAGGATCTAGAAGAAAGACTGGTCCTGGACATGTATaGCATCATCTGCTTGTGCCTGTACAGTGTGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GGSRRKTGPGHV*HHLLVPVQCEN Trigger: GTTCTCACACTGTACAGGCACAAGCAGATGATGCAATACATGTCCAGGACCAGTCTTTCTTCTAGATCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066998.5 ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS CAA 90 bp | AGAGAGATGAATATTATTCCTATAGACAACTCACTGGCTTCCATGTaGTCAGTTCTTGTTCTCAAACTGAGGATCCTGCACGGCAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: REMNIIPIDNSLASM*SVLVLKLRILHGKV Trigger: CACCTTGCCGTGCAGGATCCTCAGTTTGAGAACAAGAACTGACAACATGGAAGCCAGTGAGTTGTCTATAGGAATAATATTCATCTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066998.5 |
||
| CDS CAA 72 bp | AATATTATTCCTATAGACAACTCACTGGCTTCCATGTaGTCAGTTCTTGTTCTCAAACTGAGGATCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: NIIPIDNSLASM*SVLVLKLRILH Trigger: GTGCAGGATCCTCAGTTTGAGAACAAGAACTGACAACATGGAAGCCAGTGAGTTGTCTATAGGAATAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066998.5 |
||
| CDS CAA 72 bp | ATCACCCAGTTGAGATACACAGAACAACAAATGCACTaGTGTGTTCTTACTTTAAGTTCTGAATCCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ITQLRYTEQQMH*CVLTLSSESLE Trigger: CTCCAGGGATTCAGAACTTAAAGTAAGAACACACAAGTGCATTTGTTGTTCTGTGTATCTCAACTGGGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066998.5 ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS TCA 72 bp | CACTGGTTGGATCATGACGGACAGAATAACAGTATATaGAAGACTTCAGATTTGTTGTGCTTTCATTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HWLDHDGQNNSI*KTSDLLCFHCH Trigger: ATGGCAATGAAAGCACAACAAATCTGAAGTCTTTCATATACTGTTATTCTGTCCGTCATGATCCAACCAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066998.5 ENSMUST00000235527.2 ENSMUST00000236545.2 |
||
| CDS CAA 72 bp | CAGTATATGAAAGACTTCAGATTTGTTGTGCTTTCATaGCCATATCTTGCCCTCATATGCACAAGATTCACG | + |
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Preference number: 6 (lower is better) Translates to: QYMKDFRFVVLS*PYLALICTRFT Trigger: CGTGAATCTTGTGCATATGAGGGCAAGATATGGCAATGAAAGCACAACAAATCTGAAGTCTTTCATATACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066998.5 ENSMUST00000235527.2 ENSMUST00000236545.2 |
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