Pregenerated sensors for VMN1R234 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057203Ensembl transcript IDs: ENSMUST00000079633.3, ENSMUST00000235895.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATATCGATGTCCCGGAGAGACTCTGCCAGAGCCTTTACAGACAGATaGGGATGCTTGCAGCCTTGGACTGAGCACGGGGACCACAATGAG | + |
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Preference number: 1 (lower is better) Translates to: ISMSRRDSARAFTDR*GCLQPWTEHGDHNE Trigger: CTCATTGTGGTCCCCGTGCTCAGTCCAAGGCTGCAAGCATCCTCATCTGTCTGTAAAGGCTCTGGCAGAGTCTCTCCGGGACATCGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR GCA 90 bp | CTTTATGGCCAAGCTGTTCCCAGGAATGCTTTAATGATGGGGGCATaGCTGGGTTTGTTCTTCTTTGTTCTCAGCCCCAGGCAGCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: LYGQAVPRNALMMGA*LGLFFFVLSPRQPL Trigger: TAGAGGCTGCCTGGGGCTGAGAACAAAGAAGAACAAACCCAGGCATGCCCCCATCATTAAAGCATTCCTGGGAACAGCTTGGCCATAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR CCA 90 bp | TGTGAAAGAAACAAGCAGAGAAAAACTCCAGAACACAAAGGCCACTaGATACATAGTACTCAAGAATGTGCCTCTGAGGCATACCTATCT | + |
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Preference number: 1 (lower is better) Translates to: CERNKQRKTPEHKGH*IHSTQECASEAYLS Trigger: AGATAGGTATGCCTCAGAGGCACATTCTTGAGTACTATGTATCCAGTGGCCTTTGTGTTCTGGAGTTTTTCTCTGCTTGTTTCTTTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR GCA 90 bp | CACCCTCCATATTTCCACCCAATTTCCAGCAAGACAAAATCATATTaGATGGACTCAAGTGAAATATTGTGGGCATTAGTTACAAGGTTA | + |
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Preference number: 1 (lower is better) Translates to: HPPYFHPISSKTKSY*MDSSEILWALVTRL Trigger: TAACCTTGTAACTAATGCCCACAATATTTCACTTGAGTCCATGCAATATGATTTTGTCTTGCTGGAAATTGGGTGGAAATATGGAGGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR TCA 90 bp | CTTAGAAGGATTCTAAAGCTTTTTGTTGTCATATTGGTGAAACACTaGATGACTCCAGACCACAACACTGTAAGCAATCCCTTTTCCATA | + |
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Preference number: 1 (lower is better) Translates to: LRRILKLFVVILVKH*MTPDHNTVSNPFSI Trigger: TATGGAAAAGGGATTGCTTACAGTGTTGTGGTCTGGAGTCATTCAGTGTTTCACCAATATGACAACAAAAAGCTTTAGAATCCTTCTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR GCA 90 bp | CCACAACAGTTGACTTATTGTTTAATAGCACTGAAGAGAGGATCTTaGGATCCTTGCAAGTTTCTTCTTTCACAGACAAGGAAAAATTGT | + |
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Preference number: 1 (lower is better) Translates to: PQQLTYCLIALKRGS*DPCKFLLSQTRKNC Trigger: ACAATTTTTCCTTGTCTGTGAAAGAAGAAACTTGCAAGGATCGCAAGATCCTCTCTTCAGTGCTATTAAACAATAAGTCAACTGTTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGATGGAAGGATTGAAGGAACGGAAGGGGATCCAACTCCACAGGAAGACCTGTGCCAACGGGCAATaGGCAGAGGGAGGTGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: TQMEGLKERKGIQLHRKTCANGQ*AEGGAG Trigger: CCCGGCACCTCCCTCTGCCCATTGCCCGTTGGCACA...GGTCTTCCTGTGGAGTTGGATCCCCTTCCGTTCCTTCAATCCTTCCATCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTGACTTTAGGCGGGCTTTTGCTCTTGCAGCTGTGCACCATGAGCTCACAGAGGCAAAGAGGATaGAGGATGGGAAGACGAACT | + |
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Preference number: 2 (lower is better) Translates to: GLVTLGGLLLLQLCTMSSQRQRG*RMGRRT Trigger: AGTTCGTCTTCCCATCCTCCATCCTCTTTGCCTCTG...TGAGCTCATGGTGCACAGCTGCAAGAGCAAAAGCCCGCCTAAAGTCACCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | ACTACACATGGAGGGACCATGGCTCCAGTTGCTAATGTAGCAGAGGATGGCCTTAGCCAAGCATTGGCCTaGGATCAGGAACCCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: TTHGGTMAPVANVAEDGLSQALA*DQEPRW Trigger: CCATCTGGGTTCCTGATCTCAGGCCAATGCTTGGCT...AAGGCCATCCTCTGCTACATTAGCAACTGGAGCCATGGTCCCTCCATGTGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAACCTAAGAGTGTAAGACCTCCTTTCGGGGACCCCCACTCTAGTCTCAGGCAGCAAAAGAATACGTaGAGGCCAGGGTGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: HQPKSVRPPFGDPHSSLRQQKNT*RPGCQS Trigger: ACTCTGACACCCTGGCCTGCACGTATTCTTTTGCTG...CCTGAGACTAGAGTGGGGGTCCCCGAAAGGAGGTCTTACACTCTTAGGTTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR CAA 90 bp | CAAGCTGTTCCCAGGAATGCTTTAATGATGGGGGCATGCCTGGGTTaGTTCTTCTTTGTTCTCAGCCCCAGGCAGCCTCTAGGCTCACAA | + |
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Preference number: 2 (lower is better) Translates to: QAVPRNALMMGACLG*FFFVLSPRQPLGSQ Trigger: TTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAACAAAGAAGAACAAACCCAGGCATGCCCCCATCATTAAAGCATTCCTGGGAACAGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGATGGAAGGATTGAAGGAACGGAAGGGGATCCAACTCCACAGGAAGACCACTAACCTGGACCTGTaGGAAGTCCCAGAGACTAAG | + |
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Preference number: 2 (lower is better) Translates to: TQMEGLKERKGIQLHRKTTNLDL*EVPETK Trigger: CTTAGTCTCTGGGACTTCCCACAGGTCCAGGTTAGT...GGTCTTCCTGTGGAGTTGGATCCCCTTCCGTTCCTTCAATCCTTCCATCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAATCAGCAATTTCTTATCCTGTGCAGAGGTCTGCCTTaGCTTGTCTCAGTGCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: SQPQAASRLTNNQQFLILCRGLP*LVSVLE Trigger: CTCTAGCACTGAGACAAGGCAAGGCAGACCTCTGCA...CAGGATAAGAAATTGCTGATTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAACCTAAGAGTGTAAGACCTCCTTTCGGGGACCCCCACTCTAGTCTCAGGCTGAAGAGAGGATCTTaGGATCCTTGCAAGTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: HQPKSVRPPFGDPHSSLRLKRGS*DPCKFL Trigger: AAGAAACTTGCAAGGATCGCAAGATCCTCTCTTCAG...CCTGAGACTAGAGTGGGGGTCCCCGAAAGGAGGTCTTACACTCTTAGGTTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR CAA 90 bp | AGTGGAGCAGTGACTGAAGGAAAGGCCATCCAGAAACTGCCCCACTaGGGAATCTATCACATATGCAGACATCAGACCCAGACACTATTG | + |
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Preference number: 2 (lower is better) Translates to: SGAVTEGKAIQKLPH*GIYHICRHQTQTLL Trigger: CAATAGTGTCTGGGTCTGATGTCTGCATATGTGATAGATTCCCAAGTGGGGCAGTTTCTGGATGGCCTTTCCTTCAGTCACTGCTCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGATGGAAGGATTGAAGGAACGGAAGGGGATCCAACTCCACAGGAAGACCATAGTCTTCAGTGTCTaGGACAAAATGGAATCGGCT | + |
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Preference number: 2 (lower is better) Translates to: TQMEGLKERKGIQLHRKTIVFSV*DKMESA Trigger: AGCCGATTCCATTTTGTCTCAGACACTGAAGACTAT...GGTCTTCCTGTGGAGTTGGATCCCCTTCCGTTCCTTCAATCCTTCCATCTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGGATCCATCTCATGGGCAAGCAATAATCTCTAACACTATTACTGATGCGATGGGCAGAGGGAGGTaGCGGGCCAGATGGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: IWDPSHGQAIISNTITDAMGRGR*RARWLL Trigger: CAACAACCATCTGGCCCGGCACCTCCCTCTGCCCAT...CGCATCAGTAATAGTGTTAGAGATTATTGCTTGCCCATGAGATGGATCCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAACCTAAGAGTGTAAGACCTCCTTTCGGGGACCCCCACTCTAGTCTCAGGTCTATACCTTGTGATTaGTATGTTCTGTGCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: HQPKSVRPPFGDPHSSLRSIPCD*YVLCCL Trigger: AAGACAGCACAGAACATATCAATCACAAGGTATAGA...CCTGAGACTAGAGTGGGGGTCCCCGAAAGGAGGTCTTACACTCTTAGGTTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGATGGAAGGATTGAAGGAACGGAAGGGGATCCAACTCCACAGGAAGACCCTAACACCACTAATATaGAACATAGGGAGAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: TQMEGLKERKGIQLHRKTLTPLI*NIGRAM Trigger: CATTGCTCTCCCTATGTTTCATATTAGTGGTGTTAG...GGTCTTCCTGTGGAGTTGGATCCCCTTCCGTTCCTTCAATCCTTCCATCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGACCCAGAACTGCTACCGTCTAAAAGAAATACAGGGACAAAGAGTGGAGCAACAGATGAGGATGCTTaGAGCCTTGGACTGAGCACG | + |
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Preference number: 2 (lower is better) Translates to: FDPELLPSKRNTGTKSGATDEDA*SLGLST Trigger: CGTGCTCAGTCCAAGGCTGCAAGCATCCTCATCTGT...TGCTCCACTCTTTGTCCCTGTATTTCTTTTAGACGGTAGCAGTTCTGGGTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | ACAATCCTTCTTTCTGCAAACACACGAGGCAGTTTAATGGCAGAGATCCGGGTCTTAATGATGGGGGCATaGCTGGGTTTGTTCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: TILLSANTRGSLMAEIRVLMMGA*LGLFFF Trigger: AAAGAAGAACAAACCCAGGCATGCCCCCATCATTAA...GACCCGGATCTCTGCCATTAAACTGCCTCGTGTGTTTGCAGAAAGAAGGATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGACCCAGAACTGCTACCGTCTAAAAGAAATACAGGGACAAAGAGTGGAGCAAGCTGTTCCCAGGAATaGTTTAATGATGGGGGCATG | + |
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Preference number: 2 (lower is better) Translates to: FDPELLPSKRNTGTKSGASCSQE*FNDGGM Trigger: CATGCCCCCATCATTAAAGCATTCCTGGGAACAGCT...TGCTCCACTCTTTGTCCCTGTATTTCTTTTAGACGGTAGCAGTTCTGGGTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | ACTACACATGGAGGGACCATGGCTCCAGTTGCTAATGTAGCAGAGGATGGCCTTGTAGAACAACAAAATTaGCAACCCCAAATTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: TTHGGTMAPVANVAEDGLVEQQN*QPQIVP Trigger: AGGAACAATTTGGGGTTGGCAATTTTGTTGTTCTAC...AAGGCCATCCTCTGCTACATTAGCAACTGGAGCCATGGTCCCTCCATGTGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGATGCTTGTTTGGTTGTTGTCAGACCCAGTTCTTTGCAGCCACAGTACATTTAATCCCAGCAATTaGGAGGCAGAGACCAACCTA | + |
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Preference number: 2 (lower is better) Translates to: FLMLVWLLSDPVLCSHSTFNPSN*EAETNL Trigger: TAGGTTGGTCTCTGCCTCCCAATTGCTGGGATTAAA...TGTACTGTGGCTGCAAAGAACTGGGTCTGACAACAACCAAACAAGCATCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGGATCCATCTCATGGGCAAGCAATAATCTCTAACACTATTACTGATGCGAGGTGCCGGGCCAGATaGTTGTTGACTCAGTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: IWDPSHGQAIISNTITDARCRAR*LLTQFR Trigger: TCTGAACTGAGTCAACAACCATCTGGCCCGGCACCT...CGCATCAGTAATAGTGTTAGAGATTATTGCTTGCCCATGAGATGGATCCCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGATGGAAGGATTGAAGGAACGGAAGGGGATCCAACTCCACAGGAAGACCATAGTGACACACTATTaGCTTATTCAAACATCAGCA | + |
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Preference number: 2 (lower is better) Translates to: TQMEGLKERKGIQLHRKTIVTHY*LIQTSA Trigger: TGCTGATGTTTGAATAAGCCAATAGTGTGTCACTAT...GGTCTTCCTGTGGAGTTGGATCCCCTTCCGTTCCTTCAATCCTTCCATCTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGGATCCATCTCATGGGCAAGCAATAATCTCTAACACTATTACTGATGCGAGCAATTTCTTATCCTaGGCTTATCCCCGTCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: IWDPSHGQAIISNTITDASNFLS*AYPRPA Trigger: TGCGGGACGGGGATAAGCTCAGGATAAGAAATTGCT...CGCATCAGTAATAGTGTTAGAGATTATTGCTTGCCCATGAGATGGATCCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | ACTACACATGGAGGGACCATGGCTCCAGTTGCTAATGTAGCAGAGGATGGCCTTTTGCTCCTGCAGCAATaGTTGAAAATTTTCAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: TTHGGTMAPVANVAEDGLLLLQQ*LKIFKY Trigger: ATACTTGAAAATTTTCAAGCATTGCTGCAGGAGCAA...AAGGCCATCCTCTGCTACATTAGCAACTGGAGCCATGGTCCCTCCATGTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGACCCAGAACTGCTACCGTCTAAAAGAAATACAGGGACAAAGAGTGGAGCAAGTCATTTCCAAGGTTaGAGTTCCATGCACAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: FDPELLPSKRNTGTKSGASHFQG*SSMHSV Trigger: TACACTGTGCATGGAACTTCAACCTTGGAAATGACT...TGCTCCACTCTTTGTCCCTGTATTTCTTTTAGACGGTAGCAGTTCTGGGTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGGTGAAACACTGAATGACTCCAGACCACAACACTGTAAGCAATCCCTTTTCAAATTGTCTTCTTCCTaGTTCCAGGGACCTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: IGETLNDSRPQHCKQSLFKLSSS*FQGPHL Trigger: GAGATGAGGTCCCTGGAATCAGGAAGAAGACAATTT...GAAAAGGGATTGCTTACAGTGTTGTGGTCTGGAGTCATTCAGTGTTTCACCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGGATCCATCTCATGGGCAAGCAATAATCTCTAACACTATTACTGATGCGGGAAGACGAACTTTGTaGGAGGATACAGCATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: IWDPSHGQAIISNTITDAGRRTL*EDTAFG Trigger: CCCAAATGCTGTATCCTCTCACAAAGTTCGTCTTCC...CGCATCAGTAATAGTGTTAGAGATTATTGCTTGCCCATGAGATGGATCCCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR CAA 90 bp | GTTCTTTGCAGCCACAGTACAGGTAACAACTCCACCTGTGAGATCTaGATTCTAACCAAGGAAAAGCATGATGGAAAATGGAATAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: VLCSHSTGNNSTCEI*ILTKEKHDGKWNSH Trigger: ATGACTATTCCATTTTCCATCATGCTTTTCCTTGGTTAGAATCAAGATCTCACAGGTGGAGTTGTTACCTGTACTGTGGCTGCAAAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTGAAACACTGAATGACTCCAGACCACAACACTGTAAGCAATCCCTTTTCAAGGTTGAAGTTCCATaGACAGTGTACTTTTACTGG | + |
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Preference number: 2 (lower is better) Translates to: IGETLNDSRPQHCKQSLFKVEVP*TVYFYW Trigger: CCAGTAAAAGTACACTGTGCATGGAACTTCAACCTT...GAAAAGGGATTGCTTACAGTGTTGTGGTCTGGAGTCATTCAGTGTTTCACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR CCA 90 bp | TTATCTTTATGGCCAAGCTGTTCCCAGGAATGCTTTAATGATGGGGGCATGCCTAAGCATGATGGAAAATaGAATAGTCATTTCCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSLWPSCSQECFNDGGMPKHDGK*NSHFQG Trigger: ACCTTGGAAATGACTATTCCATTTTCCATCATGCTT...AGGCATGCCCCCATCATTAAAGCATTCCTGGGAACAGCTTGGCCATAAAGATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR CAA 90 bp | CCCACAACAGTTGACTTATTGTTTAATAGCACTGAAGAGAGGATCTaGCGATCCTTGCAAGTTTCTTCTTTCACAGACAAGGAAAAATTG | + |
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Preference number: 2 (lower is better) Translates to: PTTVDLLFNSTEERI*RSLQVSSFTDKEKL Trigger: CAATTTTTCCTTGTCTGTGAAAGAAGAAACTTGCAAGGATCGCAAGATCCTCTCTTCAGTGCTATTAAACAATAAGTCAACTGTTGTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGTGATCATAGACTTAGAAGGATTCTAAAGCTTTTTGTTGTCATATTGGTGACACCCAAAGAAACATaGCAATCCTTCTTTCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: EGDHRLRRILKLFVVILVTPKET*QSFFLQ Trigger: TTGCAGAAAGAAGGATTGTCATGTTTCTTTGGGTGT...CACCAATATGACAACAAAAAGCTTTAGAATCCTTCTAAGTCTATGATCACCTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR CAA 90 bp | AGGGATGGAGACCACTTACAGATTTTGTATAATTCTTACATTAAGTaGGATGTGAAAGAAACAAGCAGAGAAAAACTCCAGAACACAAAG | + |
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Preference number: 2 (lower is better) Translates to: RDGDHLQILYNSYIK*DVKETSREKLQNTK Trigger: CTTTGTGTTCTGGAGTTTTTCTCTGCTTGTTTCTTTCACATCCAACTTAATGTAAGAATTATACAAAATCTGTAAGTGGTCTCCATCCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGTGATCATAGACTTAGAAGGATTCTAAAGCTTTTTGTTGTCATATTGGTGGAATCTACTGTACTATaGAGACAATCAGTAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: EGDHRLRRILKLFVVILVESTVL*RQSVAN Trigger: GTTTGCTACTGATTGTCTTCATAGTACAGTAGATTC...CACCAATATGACAACAAAAAGCTTTAGAATCCTTCTAAGTCTATGATCACCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR CCA 72 bp | GCTAGTGCCCAGGGAGATGGACAGGTGCCCCGGAAATaGGCTGGTGACTTTAGGCGGGCTTTTGCTCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: ASAQGDGQVPRK*AGDFRRAFALA Trigger: TGCAAGAGCAAAAGCCCGCCTAAAGTCACCAGCCCATTTCCGGGGCACCTGTCCATCTCCCTGGGCACTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR CAA 90 bp | CACCAACCTAAGAGTGTAAGACCTCCTTTCGGGGACCCCCACTCTAGTCTCAGGACTTTAGGCGGGCTTTaGCTCTTGCAGCTGTGCACC | + |
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Preference number: 3 (lower is better) Translates to: HQPKSVRPPFGDPHSSLRTLGGL*LLQLCT Trigger: GGTGCACAGCTGCAAGAGCAAAAGCCCGCCTAAAGT...CCTGAGACTAGAGTGGGGGTCCCCGAAAGGAGGTCTTACACTCTTAGGTTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR GCA 72 bp | ACTCTGCCAGAGCCTTTACAGACAGATGAGGATGCTTaGAGCCTTGGACTGAGCACGGGGACCACAATGAGG | + |
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Preference number: 3 (lower is better) Translates to: TLPEPLQTDEDA*SLGLSTGTTMR Trigger: CCTCATTGTGGTCCCCGTGCTCAGTCCAAGGCTGCAAGCATCCTCATCTGTCTGTAAAGGCTCTGGCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR TCA 72 bp | TGGACTGAGCACGGGGACCACAATGAGGGAGATAGGTaGAGGACTAAAGAAGCTGAAGGGGTTTACAACCCC | + |
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Preference number: 3 (lower is better) Translates to: WTEHGDHNEGDR*RTKEAEGVYNP Trigger: GGGGTTGTAAACCCCTTCAGCTTCTTTAGTCCTTCACCTATCTCCCTCATTGTGGTCCCCGTGCTCAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR TCA 72 bp | GCTCTTGCAGCTGTGCACCATGAGCTCAATCTAAACTaGGAGATCGGTTTGGCACGATGGAGGTTTAGCACC | + |
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Preference number: 3 (lower is better) Translates to: ALAAVHHELNLN*EIGLARWRFST Trigger: GGTGCTAAACCTCCATCGTGCCAAACCGATCTCTCAGTTTAGATTGAGCTCATGGTGCACAGCTGCAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR GCA 72 bp | ATACATGGGCTGGACCATAGACCCTGGTACATATGTTaGAGAGGTCTGCCTTGCCTTGTCTCAGTGCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: IHGLDHRPWYIC*RGLPCLVSVLE Trigger: CTCTAGCACTGAGACAAGGCAAGGCAGACCTCTGCAACATATGTACCAGGGTCTATGGTCCAGCCCATGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR GCA 72 bp | CAAGCTGTTCCCAGGAATGCTTTAATGATGGGGGCATaGCTGGGTTTGTTCTTCTTTGTTCTCAGCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: QAVPRNALMMGA*LGLFFFVLSPR Trigger: CCTGGGGCTGAGAACAAAGAAGAACAAACCCAGGCATGCCCCCATCATTAAAGCATTCCTGGGAACAGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR-3UTR CAA 90 bp | ACAATCCTTCTTTCTGCAAACACACGAGGCAGTTTAATGGCAGAGATCCGGGTCTTGCAGAGGTCTGCCTaGCCTTGTCTCAGTGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: TILLSANTRGSLMAEIRVLQRSA*PCLSAR Trigger: TCTAGCACTGAGACAAGGCAAGGCAGACCTCTGCAA...GACCCGGATCTCTGCCATTAAACTGCCTCGTGTGTTTGCAGAAAGAAGGATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
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| 3UTR CCA 72 bp | GTTGGGTACCGTCTCAGAGGCAAAGAGGATGGAGGATaGGAAGACGAACTTTGTGAGAGGATACAGCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: VGYRLRGKEDGG*EDELCERIQHL Trigger: CAAATGCTGTATCCTCTCACAAAGTTCGTCTTCCCATCCTCCATCCTCTTTGCCTCTGAGACGGTACCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR CCA 72 bp | CCAACTCCACAGGAAGACCAACAGTGTAAACTAACCTaGACCTGTGGGAAGTCCCAGAGACTAAGTCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: PTPQEDQQCKLT*TCGKSQRLSHQ Trigger: TTGGTGACTTAGTCTCTGGGACTTCCCACAGGTCCAGGTTAGTTTACACTGTTGGTCTTCCTGTGGAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR GCA 72 bp | GGCCACCTACCCACCTCCAAAACTTTGACCCAGAACTaGTACCGTCTAAAAGAAATACAGGGACAAAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GHLPTSKTLTQN*YRLKEIQGQRV Trigger: CACTCTTTGTCCCTGTATTTCTTTTAGACGGTAGCAGTTCTGGGTCAAAGTTTTGGAGGTGGGTAGGTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACCCAGAACTGCTACCGTCTAAAAGAAATACAGGGACAAAGAGTGGAGCAGGGGCATGCCTGGGTTaGTTCTTCTTTGTTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FDPELLPSKRNTGTKSGAGACLG*FFFVLS Trigger: GCTGAGAACAAAGAAGAACAAACCCAGGCATGCCCC...TGCTCCACTCTTTGTCCCTGTATTTCTTTTAGACGGTAGCAGTTCTGGGTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR TCA 72 bp | CCTCTAGGCTCACAAACAATCAGCAATTTCTTATCCTaGGCTTATCCCCGTCCCGCAGGAAATAAACACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLGSQTISNFLS*AYPRPAGNKHR Trigger: CCTGTGTTTATTTCCTGCGGGACGGGGATAAGCTCAGGATAAGAAATTGCTGATTGTTTGTGAGCCTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR GCA 72 bp | ATCCAGAAACTGCCCCACTTGGGAATCTATCACATATaGAGACATCAGACCCAGACACTATTGCTGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: IQKLPHLGIYHI*RHQTQTLLLMP Trigger: TGGCATCAGCAATAGTGTCTGGGTCTGATGTCTGCATATGTGATAGATTCCCAAGTGGGGCAGTTTCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGGATCCATCTCATGGGCAAGCAATAATCTCTAACACTATTACTGATGCGACCCAGATGGAAGGATaGAAGGAACGGAAGGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: IWDPSHGQAIISNTITDATQMEG*KERKGI Trigger: GATCCCCTTCCGTTCCTTCAATCCTTCCATCTGGGT...CGCATCAGTAATAGTGTTAGAGATTATTGCTTGCCCATGAGATGGATCCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR TCA 72 bp | TCTAGTCTCAGGAGAGAGAGCACACCCAAAGAAACATaGCAATCCTTCTTTCTGCAAACACACGAGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSLRRESTPKET*QSFFLQTHEAV Trigger: AACTGCCTCGTGTGTTTGCAGAAAGAAGGATTGTCATGTTTCTTTGGGTGTGCTCTCTCTCCTGAGACTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR GCA 72 bp | TCCTCTTTATCTTTATGGCCAAGCTGTTCCCAGGAATaGTTTAATGATGGGGGCATGCCTGGGTTTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSLSLWPSCSQE*FNDGGMPGFVL Trigger: AAGAACAAACCCAGGCATGCCCCCATCATTAAAGCATTCCTGGGAACAGCTTGGCCATAAAGATAAAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTAGGCAGAAAGAAACAGAAGCCACCACCCACAACAGTTGACTTATTGTTTAGGATCTTGCGATCCTaGCAAGTTTCTTCTTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: PLGRKKQKPPPTTVDLLFRILRS*QVSSFT Trigger: TGTGAAAGAAGAAACTTGCAAGGATCGCAAGATCCT...AAACAATAAGTCAACTGTTGTGGGTGGTGGCTTCTGTTTCTTTCTGCCTAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACCCAGAACTGCTACCGTCTAAAAGAAATACAGGGACAAAGAGTGGAGCAGACTCAAGTGAAATATaGTGGGCATTAGTTACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FDPELLPSKRNTGTKSGADSSEI*WALVTR Trigger: CCTTGTAACTAATGCCCACAATATTTCACTTGAGTC...TGCTCCACTCTTTGTCCCTGTATTTCTTTTAGACGGTAGCAGTTCTGGGTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGGATCCATCTCATGGGCAAGCAATAATCTCTAACACTATTACTGATGCGATGCTTGTTTGGTTGTaGTCAGACCCAGTTCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: IWDPSHGQAIISNTITDAMLVWL*SDPVLC Trigger: GCAAAGAACTGGGTCTGACAACAACCAAACAAGCAT...CGCATCAGTAATAGTGTTAGAGATTATTGCTTGCCCATGAGATGGATCCCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR TCA 72 bp | CAGATTCTTCCGTGGTTAACTTACTTCATAAAATATTaGGGTAGACAAAGAAGGCTCAGAAAGTGTGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QILPWLTYFIKY*GRQRRLRKCVA Trigger: AGCCACACACTTTCTGAGCCTTCTTTGTCTACCTCAATATTTTATGAAGTAAGTTAACCACGGAAGAATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR TCA 72 bp | ATTCTAAAGCTTTTTGTTGTCATATTGGTGAAACACTaGATGACTCCAGACCACAACACTGTAAGCAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: ILKLFVVILVKH*MTPDHNTVSNP Trigger: GGGATTGCTTACAGTGTTGTGGTCTGGAGTCATTCAGTGTTTCACCAATATGACAACAAAAAGCTTTAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR GCA 72 bp | TTGACTTATTGTTTAATAGCACTGAAGAGAGGATCTTaGGATCCTTGCAAGTTTCTTCTTTCACAGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTYCLIALKRGS*DPCKFLLSQTR Trigger: CCTTGTCTGTGAAAGAAGAAACTTGCAAGGATCGCAAGATCCTCTCTTCAGTGCTATTAAACAATAAGTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR CCA 72 bp | CTTAGAGGTGGGGAATTCAGCATAGTGACACACTATTaGCTTATTCAAACATCAGCAGAAAAATTACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LRGGEFSIVTHY*LIQTSAEKLHV Trigger: GACATGTAATTTTTCTGCTGATGTTTGAATAAGCCAATAGTGTGTCACTATGCTGAATTCCCCACCTCTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR TCA 72 bp | TTGATATGTTCTGTGCTGTCTTCCAGTGGTATTTCTTaGTGGATAGTAAACACAATTTCAGTAAATATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LICSVLSSSGIS*WIVNTISVNMC Trigger: GCACATATTTACTGAAATTGTGTTTACTATCCATCAAGAAATACCACTGGAAGACAGCACAGAACATATCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR TCA 72 bp | TTTAATTTCTTCAGACTAAAAGGGACTCACCATGTCTaGGAAAGAAGAACAAACAGCCCTTCTAAAATTATC | + |
|
Preference number: 3 (lower is better) Translates to: FNFFRLKGTHHV*ERRTNSPSKII Trigger: GATAATTTTAGAAGGGCTGTTTGTTCTTCTTTCTCAGACATGGTGAGTCCCTTTTAGTCTGAAGAAATTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGTGACTTTAGGCGGGCTTTTGCTCTTGCAGCTGTGCACCATGAGCTCATCCATCCTCTGCCTGTaGCTGTGCAAAATGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GLVTLGGLLLLQLCTMSSSILCL*LCKMRT Trigger: GGTTCTCATTTTGCACAGGCACAGGCAGAGGATGGA...TGAGCTCATGGTGCACAGCTGCAAGAGCAAAAGCCCGCCTAAAGTCACCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGTGACTTTAGGCGGGCTTTTGCTCTTGCAGCTGTGCACCATGAGCTCAAGAGGAGACACGAATTaGCCAAAACTCCAGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLVTLGGLLLLQLCTMSSRGDTN*PKLQQQ Trigger: CTGTTGCTGGAGTTTTGGGCAATTCGTGTCTCCTCT...TGAGCTCATGGTGCACAGCTGCAAGAGCAAAAGCCCGCCTAAAGTCACCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR CAA 72 bp | CCCAGGAATGCTTTAATGATGGGGGCATGCCTGGGTTaGTTCTTCTTTGTTCTCAGCCCCAGGCAGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PRNALMMGACLG*FFFVLSPRQPL Trigger: TAGAGGCTGCCTGGGGCTGAGAACAAAGAAGAACAAACCCAGGCATGCCCCCATCATTAAAGCATTCCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR CAA 72 bp | GTGACTGAAGGAAAGGCCATCCAGAAACTGCCCCACTaGGGAATCTATCACATATGCAGACATCAGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTEGKAIQKLPH*GIYHICRHQTQ Trigger: CTGGGTCTGATGTCTGCATATGTGATAGATTCCCAAGTGGGGCAGTTTCTGGATGGCCTTTCCTTCAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAGATGGAAGGATTGAAGGAACGGAAGGGGATCCAACTCCACAGGAAGACCTTGAAAACCAAAAGCTaGCATTGCTTGTGGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: TQMEGLKERKGIQLHRKTLKTKS*HCLWNT Trigger: GGTGTTCCACAAGCAATGGCAGCTTTTGGTTTTCAA...GGTCTTCCTGTGGAGTTGGATCCCCTTCCGTTCCTTCAATCCTTCCATCTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR CCA 90 bp | ACTACACATGGAGGGACCATGGCTCCAGTTGCTAATGTAGCAGAGGATGGCCTTGTTGCTCTGGACTCATaGCTGGATCTAGGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TTHGGTMAPVANVAEDGLVALDS*LDLGKI Trigger: TATTTTCCCTAGATCCAGCCATGAGTCCAGAGCAAC...AAGGCCATCCTCTGCTACATTAGCAACTGGAGCCATGGTCCCTCCATGTGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGATGCTTGTTTGGTTGTTGTCAGACCCAGTTCTTTGCAGCCACAGTACATGGAACCATGTCTCATaGGCAAGTAGGGGCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLMLVWLLSDPVLCSHSTWNHVS*ASRGLQ Trigger: CTGTAAGCCCCTACTTGCTCATGAGACATGGTTCCA...TGTACTGTGGCTGCAAAGAACTGGGTCTGACAACAACCAAACAAGCATCAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAATCAGCAATTTCTTATCCTGATATGTTCCATCCTCTaGCTGTGCCTGTGCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SQPQAASRLTNNQQFLILICSIL*LCLCKM Trigger: CATTTTGCACAGGCACAGGCAGAGGATGGAACATAT...CAGGATAAGAAATTGCTGATTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGTGACTTTAGGCGGGCTTTTGCTCTTGCAGCTGTGCACCATGAGCTCATGGATACTCACTAGATaGCAGGTAAGATTAACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLVTLGGLLLLQLCTMSSWILTR*QVRLTK Trigger: TTTAGTTAATCTTACCTGGCATCTAGTGAGTATCCA...TGAGCTCATGGTGCACAGCTGCAAGAGCAAAAGCCCGCCTAAAGTCACCAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR TCA 90 bp | ACAATCCTTCTTTCTGCAAACACACGAGGCAGTTTAATGGCAGAGATCCGGGTCCCATATCACCAGAAGTaGTTTGATGAGACCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TILLSANTRGSLMAEIRVPYHQK*FDETLL Trigger: CAGAAGGGTCTCATCAAATCACTTCTGGTGATATGG...GACCCGGATCTCTGCCATTAAACTGCCTCGTGTGTTTGCAGAAAGAAGGATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTAGGCAGAAAGAAACAGAAGCCACCACCCACAACAGTTGACTTATTGTTTCACTGGAGCACAGCATaGAAAACATGCACACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLGRKKQKPPPTTVDLLFHWSTA*KTCTQH Trigger: GTGCTGTGTGCATGTTTTTCATGCTGTGCTCCAGTG...AAACAATAAGTCAACTGTTGTGGGTGGTGGCTTCTGTTTCTTTCTGCCTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTAGGCAGAAAGAAACAGAAGCCACCACCCACAACAGTTGACTTATTGTTTTGTGCCTGTGCAAAATaGGAACCATGGAACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLGRKKQKPPPTTVDLLFCACAK*EPWNHW Trigger: CCAGTGGTTCCATGGTTCTCATTTTGCACAGGCACA...AAACAATAAGTCAACTGTTGTGGGTGGTGGCTTCTGTTTCTTTCTGCCTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR CAA 72 bp | GAGGTAAAATCCCTGAAATTCCTTCCTGATGCTTGTTaGGTTGTTGTCAGACCCAGTTCTTTGCAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EVKSLKFLPDAC*VVVRPSSLQPQ Trigger: CTGTGGCTGCAAAGAACTGGGTCTGACAACAACCAAACAAGCATCAGGAAGGAATTTCAGGGATTTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR GCA 90 bp | TTTGACCCAGAACTGCTACCGTCTAAAAGAAATACAGGGACAAAGAGTGGAGCAAAGAATGGTTTGTGTTaGTCTGGACTCATGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FDPELLPSKRNTGTKSGAKNGLC*SGLMAG Trigger: TCCAGCCATGAGTCCAGAGCAACACAAACCATTCTT...TGCTCCACTCTTTGTCCCTGTATTTCTTTTAGACGGTAGCAGTTCTGGGTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR CAA 72 bp | AGCCACAGTACAGGTAACAACTCCACCTGTGAGATCTaGATTCTAACCAAGGAAAAGCATGATGGAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSTGNNSTCEI*ILTKEKHDGKW Trigger: CCATTTTCCATCATGCTTTTCCTTGGTTAGAATCAAGATCTCACAGGTGGAGTTGTTACCTGTACTGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR TCA 90 bp | ATTGGTGAAACACTGAATGACTCCAGACCACAACACTGTAAGCAATCCCTTTTCTCCAGCAACAGTCTGTaGTACCAAAATAACCCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: IGETLNDSRPQHCKQSLFSSNSL*YQNNPY Trigger: ATAGGGGTTATTTTGGTATCACAGACTGTTGCTGGA...GAAAAGGGATTGCTTACAGTGTTGTGGTCTGGAGTCATTCAGTGTTTCACCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR GCA 90 bp | ATTGGTGAAACACTGAATGACTCCAGACCACAACACTGTAAGCAATCCCTTTTCTTGGACACAATCAAGTaGATCAAAATCCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IGETLNDSRPQHCKQSLFLDTIK*IKIQSM Trigger: CATGGACTGGATTTTGATGCACTTGATTGTGTCCAA...GAAAAGGGATTGCTTACAGTGTTGTGGTCTGGAGTCATTCAGTGTTTCACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGTGATCATAGACTTAGAAGGATTCTAAAGCTTTTTGTTGTCATATTGGTGAAGCAAAGCAATGGATaGATGTGCTGGAACCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGDHRLRRILKLFVVILVKQSNG*MCWNHV Trigger: GACATGGTTCCAGCACATCCATCCATTGCTTTGCTT...CACCAATATGACAACAAAAAGCTTTAGAATCCTTCTAAGTCTATGATCACCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGTGATCATAGACTTAGAAGGATTCTAAAGCTTTTTGTTGTCATATTGGTGTCACTAGGAGAAGAATaGTTTGTGTTGCTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: EGDHRLRRILKLFVVILVSLGEE*FVLLWT Trigger: AGTCCAGAGCAACACAAACCATTCTTCTCCTAGTGA...CACCAATATGACAACAAAAAGCTTTAGAATCCTTCTAAGTCTATGATCACCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| 3UTR CAA 72 bp | CCTATCTTAGTTGTGCTAACTAATGTGCCATATTCCTaGAGTTTTAAAGGTGTTTGTTGTTCCTCCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PILVVLTNVPYS*SFKGVCCSSCM Trigger: CATACAGGAGGAACAACAAACACCTTTAAAACTCAAGGAATATGGCACATTAGTTAGCACAACTAAGATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS GCA 90 bp | AACCCCTATAGCCATATCACCAGAAGTGATTTGATGAGACCCTTCTaGCTGATCCCGAGGATTCTGCATGAGGAGGTAGGCATGGACTAC | + |
|
Preference number: 5 (lower is better) Translates to: NPYSHITRSDLMRPF*LIPRILHEEVGMDY Trigger: GTAGTCCATGCCTACCTCCTCATGCAGAATCCTCGGGATCAGGCAGAAGGGTCTCATCAAATCACTTCTGGTGATATGGCTATAGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGACTTTAGGCGGGCTTTTGCTCTTGCAGCTGTGCACCATGAGCTCACAGAAGCAAAACACATaGAGAATATTGCATGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: GLVTLGGLLLLQLCTMSSQKQNT*RILHGY Trigger: GTATCCATGCAATATTCTCAATGTGTTTTGCTTCTG...TGAGCTCATGGTGCACAGCTGCAAGAGCAAAAGCCCGCCTAAAGTCACCAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS TCA 90 bp | TTACCCAAGCAAAGCAATGGATGGATGTGCTGGAACCATGTCTCATaGGCAAGTAGGGGCTTACAGAAGCAAAACACATTGAGAATATTG | + |
|
Preference number: 5 (lower is better) Translates to: LPKQSNGWMCWNHVS*ASRGLQKQNTLRIL Trigger: CAATATTCTCAATGTGTTTTGCTTCTGTAAGCCCCTACTTGCTCATGAGACATGGTTCCAGCACATCCATCCATTGCTTTGCTTGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
||
| CDS-3UTR CAA 90 bp | CTCCATATTTCCACCCAATTTCCAGCAAGACAAAATCATATTGCATGGACTCAAGAAGAATGGTTTGTGTaGCTCTGGACTCATGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHISTQFPARQNHIAWTQEEWFV*LWTHGW Trigger: CCAGCCATGAGTCCAGAGCAACACAAACCATTCTTC...TTGAGTCCATGCAATATGATTTTGTCTTGCTGGAAATTGGGTGGAAATATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR CAA 90 bp | GGACTCACCATGTCTGAGAAAGAAGAACAAACAGCCCTTCTAAAATTATCCCACAGGAGAGTTAAGAAGTaGGACACAATCAAGTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GLTMSEKEEQTALLKLSHRRVKK*DTIKCI Trigger: GATGCACTTGATTGTGTCCAACTTCTTAACTCTCCT...GTGGGATAATTTTAGAAGGGCTGTTTGTTCTTCTTTCTCAGACATGGTGAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGTGATCATAGACTTAGAAGGATTCTAAAGCTTTTTGTTGTCATATTGGTGGATCTAGGGAAAATATaGCTCCTAATCATATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGDHRLRRILKLFVVILVDLGKI*LLIICS Trigger: GGAACATATGATTAGGAGCAATATTTTCCCTAGATC...CACCAATATGACAACAAAAAGCTTTAGAATCCTTCTAAGTCTATGATCACCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235895.2 |
||
| CDS GCA 72 bp | AGCCATATCACCAGAAGTGATTTGATGAGACCCTTCTaGCTGATCCCGAGGATTCTGCATGAGGAGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHITRSDLMRPF*LIPRILHEEVG Trigger: GCCTACCTCCTCATGCAGAATCCTCGGGATCAGGCAGAAGGGTCTCATCAAATCACTTCTGGTGATATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
||
| CDS TCA 72 bp | CAAAGCAATGGATGGATGTGCTGGAACCATGTCTCATaGGCAAGTAGGGGCTTACAGAAGCAAAACACATTG | + |
|
Preference number: 6 (lower is better) Translates to: QSNGWMCWNHVS*ASRGLQKQNTL Trigger: CAATGTGTTTTGCTTCTGTAAGCCCCTACTTGCTCATGAGACATGGTTCCAGCACATCCATCCATTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
||
| CDS GCA 72 bp | ATATTGCTCCTAATCATATGTTCCATCCTCTGCCTGTaGCTGTGCAAAATGAGAACCATGGAACCACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ILLLIICSILCL*LCKMRTMEPLE Trigger: CTCCAGTGGTTCCATGGTTCTCATTTTGCACAGGCACAGGCAGAGGATGGAACATATGATTAGGAGCAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
||
| CDS CAA 72 bp | CAAAATAACCCCTATAGCCATATCACCAGAAGTGATTaGATGAGACCCTTCTGCCTGATCCCGAGGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: QNNPYSHITRSD*MRPFCLIPRIL Trigger: CAGAATCCTCGGGATCAGGCAGAAGGGTCTCATCAAATCACTTCTGGTGATATGGCTATAGGGGTTATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
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| CDS GCA 72 bp | ATGCACACAGCACCAGGGATAATCACGTGTGCTGCATaGAGTACTTCAGCAGTTTTGTCAAAAGAAAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: MHTAPGIITCAA*STSAVLSKERE Trigger: TTCTCTTTCTTTTGACAAAACTGCTGAAGTACTGCATGCAGCACACGTGATTATCCCTGGTGCTGTGTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
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| CDS GCA 72 bp | AAACATGCACACAGCACCAGGGATAATCACGTGTGCTaGATGCAGTACTTCAGCAGTTTTGTCAAAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KHAHSTRDNHVC*MQYFSSFVKRK Trigger: CTTTCTTTTGACAAAACTGCTGAAGTACTGCATGCAGCACACGTGATTATCCCTGGTGCTGTGTGCATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
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| CDS CCA 72 bp | CTTGTGGAACACCTTTACATAGGAGAGTTAAGAAGTTaGACACAATCAAGTGCATCAAAATCCAGTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: LVEHLYIGELRS*TQSSASKSSPC Trigger: ACATGGACTGGATTTTGATGCACTTGATTGTGTCCAACTTCTTAACTCTCCTATGTAAAGGTGTTCCACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
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| CDS GCA 72 bp | AGTAAAGCACTATATAATTGTAGAGGAGACACGAATTaGCCAAAACTCCAGCAACAGTCTGTGATACCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SKALYNCRGDTN*PKLQQQSVIPK Trigger: TTTTGGTATCACAGACTGTTGCTGGAGTTTTGGGCAATTCGTGTCTCCTCTACAATTATATAGTGCTTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079633.3 ENSMUST00000235895.2 |
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