Pregenerated sensors for VMN1R233 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045575Ensembl transcript IDs: ENSMUST00000056339.3, ENSMUST00000237195.2, ENSMUST00000237629.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAGCATGTGTCCTTATTATAAGTTGGAACATCTTCTGGGTATATaGCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: WSMCPYYKLEHLLGI*PGEVLLDLPVVLCS Trigger: TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTATAATAAGGACACATGCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR CCA 90 bp | TGGATCAGAAGAGCTCACATAGAAAGACAAGGAGTGAGATGGAGCTaGAACATAAAATATTTCTTCCTGCATAATATCACACTAAATGGC | + |
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Preference number: 1 (lower is better) Translates to: WIRRAHIERQGVRWS*NIKYFFLHNITLNG Trigger: GCCATTTAGTGTGATATTATGCAGGAAGAAATATTTTATGTTCCAGCTCCATCTCACTCCTTGTCTTTCTATGTGAGCTCTTCTGATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR CCA 90 bp | GGAACATGGATCAGAAGAGCTCACATAGAAAGACAAGGAGTGAGATaGAGCTGGAACATAAAATATTTCTTCCTGCATAATATCACACTA | + |
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Preference number: 1 (lower is better) Translates to: GTWIRRAHIERQGVR*SWNIKYFFLHNITL Trigger: TAGTGTGATATTATGCAGGAAGAAATATTTTATGTTCCAGCTCCATCTCACTCCTTGTCTTTCTATGTGAGCTCTTCTGATCCATGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR TCA 90 bp | TGTATGTTGATTAATTTGCACAGGTTGAGCACAGCAAAGCAGATGTaGTTAAAGTTTTCAGGAACATGGATCAGAAGAGCTCACATAGAA | + |
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Preference number: 1 (lower is better) Translates to: CMLINLHRLSTAKQM*LKFSGTWIRRAHIE Trigger: TTCTATGTGAGCTCTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAACCTGTGCAAATTAATCAACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR TCA 90 bp | TGTTACAAACCCCAAATGCCTGTTCCCATCTCCGTTATATCATGCTaGACAATACACACTTTGATTTTACTAACCTTTCTCTTCAGAACA | + |
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Preference number: 1 (lower is better) Translates to: CYKPQMPVPISVISC*TIHTLILLTFLFRT Trigger: TGTTCTGAAGAGAAAGGTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACAGGCATTTGGGGTTTGTAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
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| 3UTR TCA 90 bp | TTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTAGATTCTTaGTCTTACAGCACAAGCCATTGCTATCCTGTTCAGGAATTTTTC | + |
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Preference number: 1 (lower is better) Translates to: FTEALQFYEVPFVDS*SYSTSHCYPVQEFF Trigger: GAAAAATTCCTGAACAGGATAGCAATGGCTTGTGCTGTAAGATCAAGAATCTACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR TCA 90 bp | AGGGATATGCATCCTTTCATGCAAAGACTCCACAGTCACTTGTCATaGCTATTACTATGCATACAATTCTTTCAGAATAATTCAATAACC | + |
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Preference number: 1 (lower is better) Translates to: RDMHPFMQRLHSHLS*LLLCIQFFQNNSIT Trigger: GGTTATTGAATTATTCTGAAAGAATTGTATGCATAGTAATAGTCATGACAAGTGACTGTGGAGTCTTTGCATGAAAGGATGCATATCCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR CAA 90 bp | TTTCTGAGGAGCCACCAGACTGATTTCCAGAGTGGTTGTACCAGCTaGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: FLRSHQTDFQSGCTS*QSHQQWRSVPLSPH Trigger: ATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTGGTGGCTCCTCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGTCATGTTTGAGTGCCTaGGGTTTCAGGAAGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRSCLSA*GFRKRT Trigger: TGTCCTCTTCCTGAAACCCCAGGCACTCAAACATGA...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGTTCAGGAAGAGGACATaGCATTCCTGGATTTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRFRKRT*HSWIWS Trigger: ACTCCAAATCCAGGAATGCCATGTCCTCTTCCTGAA...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCATTTTGCATTGATTCATaGGGAAACTCAGGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LGICPGEVLLDLPVVLCSFCIDS*GNSGGR Trigger: CCTGCCACCTGAGTTTCCTCATGAATCAATGCAAAA...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR GCA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGTGCATCACAGGGATATaGATCCTTTCATGCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRCITGI*ILSCKD Trigger: GTCTTTGCATGAAAGGATGCATATCCCTGTGATGCA...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR TCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGGCCTGGTCTACAAAGTaGGTTCCAGGACTACACAGA | + |
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Preference number: 2 (lower is better) Translates to: HEETQVAGLSHISLVSILAWSTK*VPGLHR Trigger: TCTGTGTAGTCCTGGAACTCACTTTGTAGACCAGGC...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR TCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTGCCTGGTCTACAAAGTaGGTTCCAGGACTACACAGA | + |
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Preference number: 2 (lower is better) Translates to: NITLNGTKLPIHGICEDTAWSTK*VPGLHR Trigger: TCTGTGTAGTCCTGGAACTCACTTTGTAGACCAGGC...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR TCA 90 bp | TATGAACACAGTGGAGCATGTGTCCTTATTATAAGTTGGAACATCTTCTGGGTAGAGGAGCCACCAGACTaGTTTCCAGAGTGGTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: YEHSGACVLIISWNIFWVEEPPD*FPEWLY Trigger: GTACAACCACTCTGGAAATCAGTCTGGTGGCTCCTC...TACCCAGAAGATGTTCCAACTTATAATAAGGACACATGCTCCACTGTGTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGGTAACAGTAATTGCATaGCATAACTGTGCCTTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRVTVIA*HNCAFY Trigger: ATAGAAGGCACAGTTATGCCATGCAATTACTGTTAC...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCACCAATACACAGAGTATaGGGATCAAGAAAGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LGICPGEVLLDLPVVLCSPIHRV*GSRKQS Trigger: ACTTTGCTTTCTTGATCCCCATACTCTGTGTATTGG...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCAACAGCAAAGCAGATGTaGTTAAAGTTTTCAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: LGICPGEVLLDLPVVLCSTAKQM*LKFSGT Trigger: TGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGT...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGCTGTGCCCATATCTTTaGGGCTTTTCCCCACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LCKCTTFSVSIPLLRDIWLCPYL*GFSPLS Trigger: AGAAAGTGGGGAAAAGCCTCAAAGATATGGGCACAG...CCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGTCATGTTTGAGTGCCTaGGGTTTCAGGAAGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: VEHSKADVIKVFRNMDQKSCLSA*GFRKRT Trigger: TGTCCTCTTCCTGAAACCCCAGGCACTCAAACATGA...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR CCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTTCATGTTTGAGTGCCTaGGGTTTCAGGAAGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: NITLNGTKLPIHGICEDTSCLSA*GFRKRT Trigger: TGTCCTCTTCCTGAAACCCCAGGCACTCAAACATGA...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCACAAAGTACATACGTATaGCTAATTCCAGATGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LGICPGEVLLDLPVVLCSQSTYV*LIPDEK Trigger: CTTCTCATCTGGAATTAGCCATACGTATGTACTTTG...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR GCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGGTGAACACACTCATTTaGATCACAGGGATATGCATC | + |
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Preference number: 2 (lower is better) Translates to: HEETQVAGLSHISLVSILVNTLI*ITGICI Trigger: GATGCATATCCCTGTGATGCAAATGAGTGTGTTCAC...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGAGGACATGGCATTCCTaGATTTGGAGTTACAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VEHSKADVIKVFRNMDQKRTWHS*IWSYSQ Trigger: CTGACTGTAACTCCAAATCCAGGAATGCCATGTCCT...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR CCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTTTCAGGAAGAGGACATaGCATTCCTGGATTTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: NITLNGTKLPIHGICEDTFRKRT*HSWIWS Trigger: ACTCCAAATCCAGGAATGCCATGTCCTCTTCCTGAA...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTGCCTGGTCTACAAAGTaGGTTCCAGGACTACACAGA | + |
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Preference number: 2 (lower is better) Translates to: RVTVIAWHNCAFYFKITGAWSTK*VPGLHR Trigger: TCTGTGTAGTCCTGGAACTCACTTTGTAGACCAGGC...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGCATCTGCTGTCACCTaGATTTTTGATCTTAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LCKCTTFSVSIPLLRDIWASAVT*IFDLRH Trigger: ATGCCTAAGATCAAAAATTCAGGTGACAGCAGATGC...CCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR TCA 90 bp | TATGAACACAGTGGAGCATGTGTCCTTATTATAAGTTGGAACATCTTCTGGGTACTGTGTTCAATTTTCTaGGGAGCCACCAGACTGATT | + |
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Preference number: 2 (lower is better) Translates to: YEHSGACVLIISWNIFWVLCSIF*GATRLI Trigger: AATCAGTCTGGTGGCTCCTCAGAAAATTGAACACAG...TACCCAGAAGATGTTCCAACTTATAATAAGGACACATGCTCCACTGTGTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR GCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTTGCATCACAGGGATATaGATCCTTTCATGCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: NITLNGTKLPIHGICEDTCITGI*ILSCKD Trigger: GTCTTTGCATGAAAGGATGCATATCCCTGTGATGCA...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGGTGAACACACTCATTTaGATCACAGGGATATGCATC | + |
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Preference number: 2 (lower is better) Translates to: VEHSKADVIKVFRNMDQKVNTLI*ITGICI Trigger: GATGCATATCCCTGTGATGCAAATGAGTGTGTTCAC...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR GCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTCCTTTGAGCTATGAGTaGACCACTTGCACATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: NITLNGTKLPIHGICEDTPLSYE*TTCTLK Trigger: TTTCAATGTGCAAGTGGTGCACTCATAGCTCAAAGG...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGATATGCATCCTTTCATaGAAAGACTCCACAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: VEHSKADVIKVFRNMDQKICILS*KDSTVT Trigger: AGTGACTGTGGAGTCTTTGCATGAAAGGATGCATAT...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCAGCCATTTTGTATTCCTCAATTGAGAATCCTTTGTTTAGCTCTGTACCCTTTGAGCTATGAGTaGACCACTTGCACATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: ASQPFCIPQLRILCLALYPLSYE*TTCTLK Trigger: TTTCAATGTGCAAGTGGTGCACTCATAGCTCAAAGG...GTACAGAGCTAAACAAAGGATTCTCAATTGAGGAATACAAAATGGCTGAGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACTTTTGCATTGATTCATaGGGAAACTCAGGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNFCIDS*GNSGGR Trigger: CCTGCCACCTGAGTTTCCTCATGAATCAATGCAAAA...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCAGCCATTTTGTATTCCTCAATTGAGAATCCTTTGTTTAGCTCTGTACATATGCATCCTTTCATaGAAAGACTCCACAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: ASQPFCIPQLRILCLALYICILS*KDSTVT Trigger: AGTGACTGTGGAGTCTTTGCATGAAAGGATGCATAT...GTACAGAGCTAAACAAAGGATTCTCAATTGAGGAATACAAAATGGCTGAGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR GCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGTATGAGTGCACCACTTaGACATTGAAAGATGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: HEETQVAGLSHISLVSILYECTT*TLKDVK Trigger: TTTAACATCTTTCAATGTGCAAGTGGTGCACTCATA...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR CCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTGTAACAGTAATTGCATaGCATAACTGTGCCTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: NITLNGTKLPIHGICEDTVTVIA*HNCAFY Trigger: ATAGAAGGCACAGTTATGCCATGCAATTACTGTTAC...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGTTCCCAAAGTGTTGGTaGCCTTTTTATCTTATTGAC | + |
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Preference number: 2 (lower is better) Translates to: LCKCTTFSVSIPLLRDIWFPKCW*PFYLID Trigger: GTCAATAAGATAAAAAGGCCACCAACACTTTGGGAA...CCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR CAA 90 bp | TTCAGTGTCTCTAGTTTTATGTTGAGTTTCTTGATCCTCTCAGACTaGAGCTTTCTCTTCAGAACAAAGTACATACGTATGGCTAATTCC | + |
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Preference number: 2 (lower is better) Translates to: FSVSSFMLSFLILSD*SFLFRTKYIRMANS Trigger: GGAATTAGCCATACGTATGTACTTTGTTCTGAAGAGAAAGCTCAAGTCTGAGAGGATCAAGAAACTCAACATAAAACTAGAGACACTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTCAGCCATTTTGTATTCCTCAATTGAGAATCCTTTGTTTAGCTCTGTACAGCTTTGCAATTTTATaGGGTCCCATTTGTAGATTC | + |
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Preference number: 2 (lower is better) Translates to: ASQPFCIPQLRILCLALYSFAIL*GPICRF Trigger: GAATCTACAAATGGGACCTCATAAAATTGCAAAGCT...GTACAGAGCTAAACAAAGGATTCTCAATTGAGGAATACAAAATGGCTGAGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR GCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTTATGAGTGCACCACTTaGACATTGAAAGATGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: NITLNGTKLPIHGICEDTYECTT*TLKDVK Trigger: TTTAACATCTTTCAATGTGCAAGTGGTGCACTCATA...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR CAA 90 bp | TTCTCCTCTATACGTTTCAGTGTCTCTAGTTTTATGTTGAGTTTCTaGATCCTCTCAGACTTGAGCTTTCTCTTCAGAACAAAGTACATA | + |
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Preference number: 2 (lower is better) Translates to: FSSIRFSVSSFMLSF*ILSDLSFLFRTKYI Trigger: TATGTACTTTGTTCTGAAGAGAAAGCTCAAGTCTGAGAGGATCAAGAAACTCAACATAAAACTAGAGACACTGAAACGTATAGAGGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACATATGCATCCTTTCATaGAAAGACTCCACAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNICILS*KDSTVT Trigger: AGTGACTGTGGAGTCTTTGCATGAAAGGATGCATAT...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
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| 3UTR-3UTR GCA 90 bp | TATGAACACAGTGGAGCATGTGTCCTTATTATAAGTTGGAACATCTTCTGGGTAGGTTGCAGAATAGAATaGAGCAGAACAAAGAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: YEHSGACVLIISWNIFWVGCRIE*SRTKKY Trigger: ATATTTCTTTGTTCTGCTGCATTCTATTCTGCAACC...TACCCAGAAGATGTTCCAACTTATAATAAGGACACATGCTCCACTGTGTTCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACCCAATACACAGAGTATaGGGATCAAGAAAGCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNPIHRV*GSRKQS Trigger: ACTTTGCTTTCTTGATCCCCATACTCTGTGTATTGG...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| 3UTR CCA 72 bp | CAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATaGAGGAGTGTTCCTCTTTCTCCACATCCTCGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSGCTSLQSHQQ*RSVPLSPHPRQ Trigger: CTGACGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGCCTGTGCCCATATCTTaGAGGCTTTTCCCCACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRPVPIS*RLFPTF Trigger: GAAAGTGGGGAAAAGCCTCAAAGATATGGGCACAGG...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR TCA 72 bp | GGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTaGGTTCCAGGACTACACAGAGAAACTCTGTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GFLSSRPAWSTK*VPGLHRETLSP Trigger: TGGAGACAGAGTTTCTCTGTGTAGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR GCA 72 bp | GCCACCAGACTGATTTCCAGAGTGGTTGTACCAGCTTaGAATCCCACCAACAATGGAGGAGTGTTCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ATRLISRVVVPA*NPTNNGGVFLF Trigger: AAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGGTTTTGTACTCATGTTaGAGTGCCTGGGGTTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRVLYSC*SAWGFR Trigger: CCTGAAACCCCAGGCACTCAAACATGAGTACAAAAC...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR CCA 72 bp | TCATGTTTGAGTGCCTGGGGTTTCAGGAAGAGGACATaGCATTCCTGGATTTGGAGTTACAGTCAGAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SCLSAWGFRKRT*HSWIWSYSQRL Trigger: TAACCTCTGACTGTAACTCCAAATCCAGGAATGCCATGTCCTCTTCCTGAAACCCCAGGCACTCAAACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGCTGTCACCTGAATTTTaGATCTTAGGCATTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRLSPEF*ILGILT Trigger: AGTCAGAATGCCTAAGATCAAAAATTCAGGTGACAG...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGGTCTCTAGTTTTATGTaGAGTTTCTTGATCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRVSSFM*SFLILS Trigger: TGAGAGGATCAAGAAACTCAACATAAAACTAGAGAC...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR TCA 72 bp | TTGCTGGATCTTCCAGTAGTACTGTGTTCAATTTTCTaGGGAGCCACCAGACTGATTTCCAGAGTGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLDLPVVLCSIF*GATRLISRVVV Trigger: TACAACCACTCTGGAAATCAGTCTGGTGGCTCCTCAGAAAATTGAACACAGTACTACTGGAAGATCCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR-3UTR CAA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTGTTTTGTACTCATGTTaGAGTGCCTGGGGTTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NITLNGTKLPIHGICEDTVLYSC*SAWGFR Trigger: CCTGAAACCCCAGGCACTCAAACATGAGTACAAAAC...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGAGTGAACACACTCATTaGCATCACAGGGATATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HEETQVAGLSHISLVSILSEHTH*HHRDMH Trigger: ATGCATATCCCTGTGATGCAAATGAGTGTGTTCACT...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR-3UTR CAA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTATGGCATTCCTGGATTaGGAGTTACAGTCAGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NITLNGTKLPIHGICEDTMAFLD*ELQSEV Trigger: AACCTCTGACTGTAACTCCAAATCCAGGAATGCCAT...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR TCA 72 bp | TCAATGAGTTCATATTGCCTGTTTTGCATTGATTCATaGGGAAACTCAGGTGGCAGGCTTGAGTCACATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SMSSYCLFCIDS*GNSGGRLESHF Trigger: GAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATGAATCAATGCAAAACAGGCAATATGAACTCATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR GCA 72 bp | TGTCCTTATTATAAGTTGGAACATCTTCTGGGTATATaGCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CPYYKLEHLLGI*PGEVLLDLPVV Trigger: TACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTATAATAAGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGATTGCCTGTTTTGCATaGATTCATGAGGAAACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LCKCTTFSVSIPLLRDIWIACFA*IHEETQ Trigger: CTGAGTTTCCTCATGAATCAATGCAAAACAGGCAAT...CCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACGTTTTGTACTCATGTTaGAGTGCCTGGGGTTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNVLYSC*SAWGFR Trigger: CCTGAAACCCCAGGCACTCAAACATGAGTACAAAAC...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| 3UTR TCA 72 bp | CCCCAAATGCCTGTTCCCATCTCCGTTATATCATGCTaGACAATACACACTTTGATTTTACTAACCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQMPVPISVISC*TIHTLILLTFL Trigger: GAGAAAGGTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACAGGCATTTGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| 3UTR TCA 72 bp | GCTTTGCAATTTTATGAGGTCCCATTTGTAGATTCTTaGTCTTACAGCACAAGCCATTGCTATCCTGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALQFYEVPFVDS*SYSTSHCYPVQ Trigger: CTGAACAGGATAGCAATGGCTTGTGCTGTAAGATCAAGAATCTACAAATGGGACCTCATAAAATTGCAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGAATCTCAGGATTGTTTaGATTTGCATTTCCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LCKCTTFSVSIPLLRDIWNLRIV*ICISLM Trigger: CATCAGGGAAATGCAAATCAAAACAATCCTGAGATT...CCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR TCA 72 bp | TTAGGCTTTGTGAGGAGAGAACAAAATTTTAACTGCTaGACTATCTCTTCAGCACTGAAGAGATTACTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGFVRREQNFNC*TISSALKRLLS Trigger: GGACAGTAATCTCTTCAGTGCTGAAGAGATAGTTCAGCAGTTAAAATTTTGTTCTCTCCTCACAAAGCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR TCA 72 bp | ATTAATTTGCACAGGTTGAGCACAGCAAAGCAGATGTaGTTAAAGTTTTCAGGAACATGGATCAGAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: INLHRLSTAKQM*LKFSGTWIRRA Trigger: AGCTCTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAACCTGTGCAAATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACAGTGAACACACTCATTaGCATCACAGGGATATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNSEHTH*HHRDMH Trigger: ATGCATATCCCTGTGATGCAAATGAGTGTGTTCACT...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTAGTGAACACACTCATTaGCATCACAGGGATATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RVTVIAWHNCAFYFKITGSEHTH*HHRDMH Trigger: ATGCATATCCCTGTGATGCAAATGAGTGTGTTCACT...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGAACACAGTGGAGCATGTGTCCTTATTATAAGTTGGAACATCTTCTGGGTATCAATTGAGAATCCTTaGTTTAGCTCTGTACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: YEHSGACVLIISWNIFWVSIENP*FSSVHH Trigger: ATGGTGTACAGAGCTAAACAAAGGATTCTCAATTGA...TACCCAGAAGATGTTCCAACTTATAATAAGGACACATGCTCCACTGTGTTCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR CCA 72 bp | ATCAGAAGAGCTCACATAGAAAGACAAGGAGTGAGATaGAGCTGGAACATAAAATATTTCTTCCTGCATAAT | + |
|
Preference number: 3 (lower is better) Translates to: IRRAHIERQGVR*SWNIKYFFLHN Trigger: ATTATGCAGGAAGAAATATTTTATGTTCCAGCTCCATCTCACTCCTTGTCTTTCTATGTGAGCTCTTCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR TCA 72 bp | TCCTTTCCCAAAGTGTTGGTGGCCTTTTTATCTTATTaGCAGTATCTTTTGCTTTACAGAAGCTTTGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: SFPKVLVAFLSY*QYLLLYRSFAI Trigger: AATTGCAAAGCTTCTGTAAAGCAAAAGATACTGTCAATAAGATAAAAAGGCCACCAACACTTTGGGAAAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| 3UTR CCA 72 bp | CACTGTCATATACTCACAAGGGTAACAGTAATTGCATaGCATAACTGTGCCTTCTATTTTAAAATAACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HCHILTRVTVIA*HNCAFYFKITG Trigger: ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCTTGTGAGTATATGACAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR TCA 72 bp | CATCCTTTCATGCAAAGACTCCACAGTCACTTGTCATaGCTATTACTATGCATACAATTCTTTCAGAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: HPFMQRLHSHLS*LLLCIQFFQNN Trigger: ATTATTCTGAAAGAATTGTATGCATAGTAATAGTCATGACAAGTGACTGTGGAGTCTTTGCATGAAAGGATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCAAGGGCAGGCAGAAGCTaGATGCCCGAGAGTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGICPGEVLLDLPVVLCSRAGRS*MPESHD Trigger: GTCATGACTCTCGGGCATCCAGCTTCTGCCTGCCCT...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCAGTTCACTGGCATCCATaGAGTCAGTTCCTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGICPGEVLLDLPVVLCSVHWHP*SQFLLS Trigger: TGAGAGGAGGAACTGACTGCATGGATGCCAGTGAAC...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR CCA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGCAGGATGTCACTGGTTaGATCATGACGCACAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRQDVTG*IMTHSI Trigger: TATGCTGTGCGTCATGATCCAACCAGTGACATCCTG...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGAGGGCAGGCAGAAGCTaGATGCCCGAGAGTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HEETQVAGLSHISLVSILRAGRS*MPESHD Trigger: GTCATGACTCTCGGGCATCCAGCTTCTGCCTGCCCT...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCAGAGAGTCATGACTCATaGGGAGAAAGGGACAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGICPGEVLLDLPVVLCSESHDS*GERDKQ Trigger: CTGTTTGTCCCTTTCTCCTCATGAGTCATGACTCTC...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR TCA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGTCTGGGGTATGCCTTTaGACAGTACTGTTAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRSGVCL*TVLLRC Trigger: ACATCTTAACAGTACTGTTCAAAGGCATACCCCAGA...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCAATCCTGGGCATTTGTTaGATCCTTTGCTTGTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGICPGEVLLDLPVVLCSILGIC*ILCLCL Trigger: TAGGCACAAGCAAAGGATGCAACAAATGCCCAGGAT...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGGATGCCCGAGAGTCATaGCTCATGAGGAGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKDARES*LMRRKG Trigger: TCCCTTTCTCCTCATGAGTCATGACTCTCGGGCATC...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTGATGCCCGAGAGTCATaGCTCATGAGGAGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NITLNGTKLPIHGICEDTDARES*LMRRKG Trigger: TCCCTTTCTCCTCATGAGTCATGACTCTCGGGCATC...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGGTTCACTGGCATCCATaGAGTCAGTTCCTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HEETQVAGLSHISLVSILVHWHP*SQFLLS Trigger: TGAGAGGAGGAACTGACTGCATGGATGCCAGTGAAC...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCAAACCAAAGAGGACATTaGAGCTACATTTGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGICPGEVLLDLPVVLCSNQRGH*SYICQR Trigger: TCTCTGGCAAATGTAGCTGCAATGTCCTCTTTGGTT...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGTTTAGTGGCTCTGGATaGAGGGGTGGATTTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HEETQVAGLSHISLVSILFSGSG*RGGFGR Trigger: TCTTCCAAATCCACCCCTGCATCCAGAGCCACTAAA...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGCTACAGACAGTTCACTaGCATCCATGCAGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEETQVAGLSHISLVSILLQTVH*HPCSQF Trigger: GAACTGACTGCATGGATGCCAGTGAACTGTCTGTAG...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGCAGGATGTCACTGGTTaGATCATGACGCACAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: HEETQVAGLSHISLVSILQDVTG*IMTHSI Trigger: TATGCTGTGCGTCATGATCCAACCAGTGACATCCTG...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACAGGGCAGGCAGAAGCTaGATGCCCGAGAGTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNRAGRS*MPESHD Trigger: GTCATGACTCTCGGGCATCCAGCTTCTGCCTGCCCT...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGGAGAGTCATGACTCATaGGGAGAAAGGGACAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKESHDS*GERDKQ Trigger: CTGTTTGTCCCTTTCTCCTCATGAGTCATGACTCTC...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTTTTAGTGGCTCTGGATaGAGGGGTGGATTTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NITLNGTKLPIHGICEDTFSGSG*RGGFGR Trigger: TCTTCCAAATCCACCCCTGCATCCAGAGCCACTAAA...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGCATTGCAGCTACATTTaGCAGAGACCAGCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKHCSYI*QRPAGI Trigger: AATCCCAGCTGGTCTCTGGCAAATGTAGCTGCAATG...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTCTACAGACAGTTCACTaGCATCCATGCAGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NITLNGTKLPIHGICEDTLQTVH*HPCSQF Trigger: GAACTGACTGCATGGATGCCAGTGAACTGTCTGTAG...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCAAAGAAACATTCATCCTaGGCATTTGTTGCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGICPGEVLLDLPVVLCSKKHSS*AFVASF Trigger: AAAGGATGCAACAAATGCCCAGGATGAATGTTTCTT...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGTTTCAAGCCAAAAGCTaGTATTGTCTGGGGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKFQAKS*YCLGYA Trigger: GGCATACCCCAGACAATAGCAGCTTTTGGCTTGAAA...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGATCCTGGGCATTTGTTaGATCCTTTGCTTGTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKILGIC*ILCLCL Trigger: TAGGCACAAGCAAAGGATGCAACAAATGCCCAGGAT...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGAAAGCTGCTATTGTCTaGGGTATGCCTTTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HEETQVAGLSHISLVSILKAAIV*GMPLNS Trigger: ACTGTTCAAAGGCATACCCCAGACAATAGCAGCTTT...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGATGCAGGGGTGGATTTaGAAGAAACATTCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKMQGWI*KKHSSW Trigger: CCAGGATGAATGTTTCTTCCAAATCCACCCCTGCAT...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTATGCAGGGGTGGATTTaGAAGAAACATTCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NITLNGTKLPIHGICEDTMQGWI*KKHSSW Trigger: CCAGGATGAATGTTTCTTCCAAATCCACCCCTGCAT...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGCTCTGGATGCAGGGGTaGATTTGGAAGAAACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKLWMQG*IWKKHS Trigger: TGAATGTTTCTTCCAAATCCACCCCTGCATCCAGAG...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| 3UTR CAA 72 bp | TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTaGAGGGACATCTGGGTTCTTTCTAGCTTCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CKCTTFSVSIPL*RDIWVLSSFWL Trigger: TAGCCAGAAGCTAGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR TCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTTCTGGGGTATGCCTTTaGACAGTACTGTTAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NITLNGTKLPIHGICEDTSGVCL*TVLLRC Trigger: ACATCTTAACAGTACTGTTCAAAGGCATACCCCAGA...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACGTTCACTGGCATCCATaGAGTCAGTTCCTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNVHWHP*SQFLLS Trigger: TGAGAGGAGGAACTGACTGCATGGATGCCAGTGAAC...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGAACCAAAGAGGACATTaGAGCTACATTTGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKNQRGH*SYICQR Trigger: TCTCTGGCAAATGTAGCTGCAATGTCCTCTTTGGTT...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTAACCAAAGAGGACATTaGAGCTACATTTGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NITLNGTKLPIHGICEDTNQRGH*SYICQR Trigger: TCTCTGGCAAATGTAGCTGCAATGTCCTCTTTGGTT...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGAAAGCTGCTATTGTCTaGGGTATGCCTTTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKKAAIV*GMPLNS Trigger: ACTGTTCAAAGGCATACCCCAGACAATAGCAGCTTT...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTACACCAATCATAGTCTaGAACAAGATGATCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NITLNGTKLPIHGICEDTTPIIV*NKMITP Trigger: AGGAGTGATCATCTTGTTTCAGACTATGATTGGTGT...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGACACCAATCATAGTCTaGAACAAGATGATCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCKCTTFSVSIPLLRDIWTPIIV*NKMITP Trigger: AGGAGTGATCATCTTGTTTCAGACTATGATTGGTGT...CCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR TCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGTGCATCCAATATCATTaGGAAAGTCTTTCAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HEETQVAGLSHISLVSILCIQYH*ESLSSQ Trigger: TTGGCTTGAAAGACTTTCTCAATGATATTGGATGCA...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTGAGAGTCATGACTCATaGGGAGAAAGGGACAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVTVIAWHNCAFYFKITGESHDS*GERDKQ Trigger: CTGTTTGTCCCTTTCTCCTCATGAGTCATGACTCTC...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGATTTGTTGCATCCTTTaGTTGTGCCTATACAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKICCIL*LCLYRV Trigger: AACCCTGTATAGGCACAAGCAAAGGATGCAACAAAT...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTTTTAGTGGCTCTGGATaGAGGGGTGGATTTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVTVIAWHNCAFYFKITGFSGSG*RGGFGR Trigger: TCTTCCAAATCCACCCCTGCATCCAGAGCCACTAAA...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACCATTGCAGCTACATTTaGCAGAGACCAGCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNHCSYI*QRPAGI Trigger: AATCCCAGCTGGTCTCTGGCAAATGTAGCTGCAATG...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACCTACAGACAGTTCACTaGCATCCATGCAGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNLQTVH*HPCSQF Trigger: GAACTGACTGCATGGATGCCAGTGAACTGTCTGTAG...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACCAGGATGTCACTGGTTaGATCATGACGCACAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNQDVTG*IMTHSI Trigger: TATGCTGTGCGTCATGATCCAACCAGTGACATCCTG...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTTTTCAAGCCAAAAGCTaGTATTGTCTGGGGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVTVIAWHNCAFYFKITGFQAKS*YCLGYA Trigger: GGCATACCCCAGACAATAGCAGCTTTTGGCTTGAAA...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGTATTTTGCCCTCATATaGACAAGATTAACACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HEETQVAGLSHISLVSILYFALI*TRLTLL Trigger: AAGCAGTGTTAATCTTGTGCATATGAGGGCAAAATA...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | TATGAACACAGTGGAGCATGTGTCCTTATTATAAGTTGGAACATCTTCTGGGTAATTTGTTGCATCCTTTaGTTGTGCCTATACAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YEHSGACVLIISWNIFWVICCIL*LCLYRV Trigger: AACCCTGTATAGGCACAAGCAAAGGATGCAACAAAT...TACCCAGAAGATGTTCCAACTTATAATAAGGACACATGCTCCACTGTGTTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTATCCTGGGCATTTGTTaGATCCTTTGCTTGTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RVTVIAWHNCAFYFKITGILGIC*ILCLCL Trigger: TAGGCACAAGCAAAGGATGCAACAAATGCCCAGGAT...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGAAGAAACATTCATCCTaGGCATTTGTTGCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKKKHSS*AFVASF Trigger: AAAGGATGCAACAAATGCCCAGGATGAATGTTTCTT...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACATGCAGGGGTGGATTTaGAAGAAACATTCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNMQGWI*KKHSSW Trigger: CCAGGATGAATGTTTCTTCCAAATCCACCCCTGCAT...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACCTCTGGATGCAGGGGTaGATTTGGAAGAAACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNLWMQG*IWKKHS Trigger: TGAATGTTTCTTCCAAATCCACCCCTGCATCCAGAG...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCAGCCATTTTGTATTCCTCAATTGAGAATCCTTTGTTTAGCTCTGTACCTGCTTATAATGAAATaGATTACCCAGTTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ASQPFCIPQLRILCLALYLLIMK*ITQFRY Trigger: GTACCTGAACTGGGTAATTCATTTCATTATAAGCAG...GTACAGAGCTAAACAAAGGATTCTCAATTGAGGAATACAAAATGGCTGAGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
||
| CDS-3UTR GCA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTTATTTTGCCCTCATATaGACAAGATTAACACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NITLNGTKLPIHGICEDTYFALI*TRLTLL Trigger: AAGCAGTGTTAATCTTGTGCATATGAGGGCAAAATA...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGTATTTTGCCCTCATATaGACAAGATTAACACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VEHSKADVIKVFRNMDQKYFALI*TRLTLL Trigger: AAGCAGTGTTAATCTTGTGCATATGAGGGCAAAATA...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACACACCAATCATAGTCTaGAACAAGATGATCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNTPIIV*NKMITP Trigger: AGGAGTGATCATCTTGTTTCAGACTATGATTGGTGT...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACATTTGTTGCATCCTTTaGTTGTGCCTATACAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNICCIL*LCLYRV Trigger: AACCCTGTATAGGCACAAGCAAAGGATGCAACAAAT...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTTGCATCCAATATCATTaGGAAAGTCTTTCAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RVTVIAWHNCAFYFKITGCIQYH*ESLSSQ Trigger: TTGGCTTGAAAGACTTTCTCAATGATATTGGATGCA...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACTGCATCCAATATCATTaGGAAAGTCTTTCAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNCIQYH*ESLSSQ Trigger: TTGGCTTGAAAGACTTTCTCAATGATATTGGATGCA...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACCTGCTTATAATGAAATaGATTACCCAGTTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNLLIMK*ITQFRY Trigger: GTACCTGAACTGGGTAATTCATTTCATTATAAGCAG...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTAGAGTTGCTAAGAGTTaGCATATAGTAGAGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVTVIAWHNCAFYFKITGRVAKS*HIVEIV Trigger: CACAATCTCTACTATATGTCAACTCTTAGCAACTCT...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTAAGAAACATTCATCCTaGGCATTTGTTGCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVTVIAWHNCAFYFKITGKKHSS*AFVASF Trigger: AAAGGATGCAACAAATGCCCAGGATGAATGTTTCTT...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| 3UTR CAA 72 bp | ATCCTTTCCCAAAGTGTTGGTGGCCTTTTTATCTTATaGACAGTATCTTTTGCTTTACAGAAGCTTTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: ILSQSVGGLFIL*TVSFALQKLCN Trigger: ATTGCAAAGCTTCTGTAAAGCAAAAGATACTGTCAATAAGATAAAAAGGCCACCAACACTTTGGGAAAGGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| CDS GCA 90 bp | AGGCTTTGGGGAAATATTCCTTTTCAAGGGCAGGCAGAAGCTGGATaGCCGAGAGTCATGACTCATGAGGAGAAAGGGACAAACAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: RLWGNIPFQGQAEAG*PRVMTHEEKGTNSG Trigger: CCCACTGTTTGTCCCTTTCTCCTCATGAGTCATGACTCTCGGGCATCCAGCTTCTGCCTGCCCTTGAAAAGGAATATTTCCCCAAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | CAGACTGATTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAACAATGGAGGGATGCAGGGGTGGATTaGGAAGAAACATTCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: QTDFQSGCTSLQSHQQWRDAGVD*EETFIL Trigger: CAGGATGAATGTTTCTTCCAAATCCACCCCTGCATC...CCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| CDS GCA 90 bp | TTGGAAGAAACATTCATCCTGGGCATTTGTTGCATCCTTTGCTTGTaGCTATACAGGGTTAGAACCATGAAGCCACTGGCATATAGCATG | + |
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Preference number: 5 (lower is better) Translates to: LEETFILGICCILCL*LYRVRTMKPLAYSM Trigger: CATGCTATATGCCAGTGGCTTCATGGTTCTAACCCTGTATAGGCACAAGCAAAGGATGCAACAAATGCCCAGGATGAATGTTTCTTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGCATCCTGGGCATTTGTaGCATCCTTTGCTTGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: VEHSKADVIKVFRNMDQKHPGHL*HPLLVP Trigger: AGGCACAAGCAAAGGATGCAACAAATGCCCAGGATG...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGGATGCAGGGGTGGATTaGGAAGAAACATTCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: HEETQVAGLSHISLVSILDAGVD*EETFIL Trigger: CAGGATGAATGTTTCTTCCAAATCCACCCCTGCATC...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | GTTGAGCACAGCAAAGCAGATGTGATTAAAGTTTTCAGGAACATGGATCAGAAGACATTGCAGCTACATTaGCCAGAGACCAGCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: VEHSKADVIKVFRNMDQKTLQLH*PETSWD Trigger: ATCCCAGCTGGTCTCTGGCAAATGTAGCTGCAATGT...CTTCTGATCCATGTTCCTGAAAACTTTAATCACATCTGCTTTGCTGTGCTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCAGTAGTACTGTGTTCATTGCATCCAATATCATaGAGAAAGTCTTTCAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LGICPGEVLLDLPVVLCSLHPIS*RKSFKP Trigger: TGGCTTGAAAGACTTTCTCAATGATATTGGATGCAA...TGAACACAGTACTACTGGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| CDS-3UTR CAA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGCATTTGTTGCATCCTTaGCTTGTGCCTATACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: HEETQVAGLSHISLVSILHLLHP*LVPIQG Trigger: ACCCTGTATAGGCACAAGCAAAGGATGCAACAAATG...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | TATGAACACAGTGGAGCATGTGTCCTTATTATAAGTTGGAACATCTTCTGGGTACATCCTGGGCATTTGTaGCATCCTTTGCTTGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: YEHSGACVLIISWNIFWVHPGHL*HPLLVP Trigger: AGGCACAAGCAAAGGATGCAACAAATGCCCAGGATG...TACCCAGAAGATGTTCCAACTTATAATAAGGACACATGCTCCACTGTGTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| CDS-3UTR CAA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGATTCATCCTGGGCATTaGTTGCATCCTTTGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HEETQVAGLSHISLVSILIHPGH*LHPLLV Trigger: CACAAGCAAAGGATGCAACAAATGCCCAGGATGAAT...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | TATGAACACAGTGGAGCATGTGTCCTTATTATAAGTTGGAACATCTTCTGGGTAACATTGCAGCTACATTaGCCAGAGACCAGCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: YEHSGACVLIISWNIFWVTLQLH*PETSWD Trigger: ATCCCAGCTGGTCTCTGGCAAATGTAGCTGCAATGT...TACCCAGAAGATGTTCCAACTTATAATAAGGACACATGCTCCACTGTGTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| CDS-3UTR CAA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGAAACCAAAGAGGACATaGCAGCTACATTTGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: HEETQVAGLSHISLVSILKPKRT*QLHLPE Trigger: CTCTGGCAAATGTAGCTGCAATGTCCTCTTTGGTTT...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTATTCATCCTGGGCATTaGTTGCATCCTTTGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: NITLNGTKLPIHGICEDTIHPGH*LHPLLV Trigger: CACAAGCAAAGGATGCAACAAATGCCCAGGATGAAT...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTAAACCAAAGAGGACATaGCAGCTACATTTGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: NITLNGTKLPIHGICEDTKPKRT*QLHLPE Trigger: CTCTGGCAAATGTAGCTGCAATGTCCTCTTTGGTTT...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | GCTTCTCAGCCATTTTGTATTCCTCAATTGAGAATCCTTTGTTTAGCTCTGTACCATTTGTTGCATCCTTaGCTTGTGCCTATACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: ASQPFCIPQLRILCLALYHLLHP*LVPIQG Trigger: ACCCTGTATAGGCACAAGCAAAGGATGCAACAAATG...GTACAGAGCTAAACAAAGGATTCTCAATTGAGGAATACAAAATGGCTGAGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| CDS-3UTR CAA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTCATCCTGGGCATTTGTaGCATCCTTTGCTTGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: RVTVIAWHNCAFYFKITGHPGHL*HPLLVP Trigger: AGGCACAAGCAAAGGATGCAACAAATGCCCAGGATG...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | GCTTCTCAGCCATTTTGTATTCCTCAATTGAGAATCCTTTGTTTAGCTCTGTACATTCATCCTGGGCATTaGTTGCATCCTTTGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: ASQPFCIPQLRILCLALYIHPGH*LHPLLV Trigger: CACAAGCAAAGGATGCAACAAATGCCCAGGATGAAT...GTACAGAGCTAAACAAAGGATTCTCAATTGAGGAATACAAAATGGCTGAGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237195.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACACATTGCAGCTACATTaGCCAGAGACCAGCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNTLQLH*PETSWD Trigger: ATCCCAGCTGGTCTCTGGCAAATGTAGCTGCAATGT...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGACCTCAACCTGTCCCTaGTTAAGTAAAGAAACATAT | + |
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Preference number: 5 (lower is better) Translates to: HEETQVAGLSHISLVSILTSTCP*LSKETY Trigger: ATATGTTTCTTTACTTAACAAGGGACAGGTTGAGGT...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | CATGAGGAAACTCAGGTGGCAGGCTTGAGTCACATTTCATTAGTTTCCATTTTGAAAGTATATCAGGACTaGACACTAATGCTGCATACA | + |
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Preference number: 5 (lower is better) Translates to: HEETQVAGLSHISLVSILKVYQD*TLMLHT Trigger: TGTATGCAGCATTAGTGTCAAGTCCTGATATACTTT...CAAAATGGAAACTAATGAAATGTGACTCAAGCCTGCCACCTGAGTTTCCTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTGATGCAGGGGTGGATTaGGAAGAAACATTCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: RVTVIAWHNCAFYFKITGDAGVD*EETFIL Trigger: CAGGATGAATGTTTCTTCCAAATCCACCCCTGCATC...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | AATATCACACTAAATGGCACCAAGCTTCCAATCCACGGTATTTGTGAAGACACTAAAGTATATCAGGACTaGACACTAATGCTGCATACA | + |
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Preference number: 5 (lower is better) Translates to: NITLNGTKLPIHGICEDTKVYQD*TLMLHT Trigger: TGTATGCAGCATTAGTGTCAAGTCCTGATATACTTT...AGTGTCTTCACAAATACCGTGGATTGGAAGCTTGGTGCCATTTAGTGTGATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACCATTTGTTGCATCCTTaGCTTGTGCCTATACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNHLLHP*LVPIQG Trigger: ACCCTGTATAGGCACAAGCAAAGGATGCAACAAATG...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | AGGGTAACAGTAATTGCATGGCATAACTGTGCCTTCTATTTTAAAATAACAGGTAAACCAAAGAGGACATaGCAGCTACATTTGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVTVIAWHNCAFYFKITGKPKRT*QLHLPE Trigger: CTCTGGCAAATGTAGCTGCAATGTCCTCTTTGGTTT...ACCTGTTATTTTAAAATAGAAGGCACAGTTATGCCATGCAATTACTGTTACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCCATCTCCGTTATATCATGCTGAACAATACACACTTTGATTTTACTAACTTGCATCCAATATCATaGAGAAAGTCTTTCAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: CSHLRYIMLNNTHFDFTNLHPIS*RKSFKP Trigger: TGGCTTGAAAGACTTTCTCAATGATATTGGATGCAA...GTTAGTAAAATCAAAGTGTGTATTGTTCAGCATGATATAACGGAGATGGGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056339.3 ENSMUST00000237629.2 |
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| CDS GCA 72 bp | AGTGGGGAAAACCAAAGAGGACATTGCAGCTACATTTaGCAGAGACCAGCTGGGATTATGCATGAGAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SGENQRGHCSYI*QRPAGIMHESC Trigger: GCAACTCTCATGCATAATCCCAGCTGGTCTCTGGCAAATGTAGCTGCAATGTCCTCTTTGGTTTTCCCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS GCA 72 bp | ACATTCATCCTGGGCATTTGTTGCATCCTTTGCTTGTaGCTATACAGGGTTAGAACCATGAAGCCACTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TFILGICCILCL*LYRVRTMKPLA Trigger: TGCCAGTGGCTTCATGGTTCTAACCCTGTATAGGCACAAGCAAAGGATGCAACAAATGCCCAGGATGAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS CAA 72 bp | GAAAGGGACAAACAGTGGGGAAAACCAAAGAGGACATaGCAGCTACATTTGCCAGAGACCAGCTGGGATTAT | + |
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Preference number: 6 (lower is better) Translates to: ERDKQWGKPKRT*QLHLPETSWDY Trigger: ATAATCCCAGCTGGTCTCTGGCAAATGTAGCTGCAATGTCCTCTTTGGTTTTCCCCACTGTTTGTCCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS CCA 72 bp | TGGATGCAGGGGTGGATTTGGAAGAAACATTCATCCTaGGCATTTGTTGCATCCTTTGCTTGTGCCTATACA | + |
|
Preference number: 6 (lower is better) Translates to: WMQGWIWKKHSS*AFVASFACAYT Trigger: TGTATAGGCACAAGCAAAGGATGCAACAAATGCCCAGGATGAATGTTTCTTCCAAATCCACCCCTGCATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS CAA 72 bp | GAAACATTCATCCTGGGCATTTGTTGCATCCTTTGCTaGTGCCTATACAGGGTTAGAACCATGAAGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ETFILGICCILC*CLYRVRTMKPL Trigger: CAGTGGCTTCATGGTTCTAACCCTGTATAGGCACAAGCAAAGGATGCAACAAATGCCCAGGATGAATGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS CAA 90 bp | GATTTGGAAGAAACATTCATCCTGGGCATTTGTTGCATCCTTTGCTaGTGCCTATACAGGGTTAGAACCATGAAGCCACTGGCATATAGC | + |
|
Preference number: 6 (lower is better) Translates to: DLEETFILGICCILC*CLYRVRTMKPLAYS Trigger: GCTATATGCCAGTGGCTTCATGGTTCTAACCCTGTATAGGCACAAGCAAAGGATGCAACAAATGCCCAGGATGAATGTTTCTTCCAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS GCA 72 bp | GAAGAAACATTCATCCTGGGCATTTGTTGCATCCTTTaGTTGTGCCTATACAGGGTTAGAACCATGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EETFILGICCIL*LCLYRVRTMKP Trigger: TGGCTTCATGGTTCTAACCCTGTATAGGCACAAGCAAAGGATGCAACAAATGCCCAGGATGAATGTTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS GCA 72 bp | GTGGATTTGGAAGAAACATTCATCCTGGGCATTTGTTaGATCCTTTGCTTGTGCCTATACAGGGTTAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: VDLEETFILGIC*ILCLCLYRVRT Trigger: GGTTCTAACCCTGTATAGGCACAAGCAAAGGATGCAACAAATGCCCAGGATGAATGTTTCTTCCAAATCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS TCA 72 bp | AGGAGAGAAGAATTAGCCAAAACACCAATCATAGTCTaGAACAAGATGATCACTCCTACAGACAGTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: RREELAKTPIIV*NKMITPTDSSL Trigger: CAGTGAACTGTCTGTAGGAGTGATCATCTTGTTTCAGACTATGATTGGTGTTTTGGCTAATTCTTCTCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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| CDS GCA 72 bp | AAGAAGTGCTGCCAATACAAACACCTCTACCTATTCTaGGAAAGGAGAAAATCAATTTGCATCCAATATCAT | + |
|
Preference number: 6 (lower is better) Translates to: KKCCQYKHLYLF*ERRKSICIQYH Trigger: ATGATATTGGATGCAAATTGATTTTCTCCTTTCGCAGAATAGGTAGAGGTGTTTGTATTGGCAGCACTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056339.3 ENSMUST00000237195.2 ENSMUST00000237629.2 |
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