Pregenerated sensors for VMN1R230 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045417Ensembl transcript IDs: ENSMUST00000053974.2, ENSMUST00000232909.2, ENSMUST00000233670.2, ENSMUST00000233939.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACTTCTGCTGGGTATCTGCAGGGCCCCATCTGCTACAATTATTTaGGTGGGTATCCTACCTGTTGAGCTGGCTGCAGCATATCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PLLLGICRAPSATII*VGILPVELAAAYLL Trigger: CAGGAGATATGCTGCAGCCAGCTCAACAGGTAGGATACCCACCCAAATAATTGTAGCAGATGGGGCCCTGCAGATACCCAGCAGAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR TCA 90 bp | CAGGGCCCCATCTGCTACAATTATTTGGGTGGGTATCCTACCTGTTaGGCTGGCTGCAGCATATCTCCTGGCAACCTTGCTGAATGTGCA | + |
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Preference number: 1 (lower is better) Translates to: QGPICYNYLGGYPTC*AGCSISPGNLAECA Trigger: TGCACATTCAGCAAGGTTGCCAGGAGATATGCTGCAGCCAGCTCAACAGGTAGGATACCCACCCAAATAATTGTAGCAGATGGGGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR CCA 90 bp | TTCTGCTGGGTATCTGCAGGGCCCCATCTGCTACAATTATTTGGGTaGGTATCCTACCTGTTGAGCTGGCTGCAGCATATCTCCTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: FCWVSAGPHLLQLFG*VSYLLSWLQHISWQ Trigger: TTGCCAGGAGATATGCTGCAGCCAGCTCAACAGGTAGGATACCCACCCAAATAATTGTAGCAGATGGGGCCCTGCAGATACCCAGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR TCA 90 bp | GAGTTGTTGCAAATGTCCTGTTTGATCTCTGTCCCTAGCTGCAGCTaGTCTCCTGGTAGACTTGTAGACTGTTGCCCTGTTTTTATCAGA | + |
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Preference number: 1 (lower is better) Translates to: ELLQMSCLISVPSCS*SPGRLVDCCPVFIR Trigger: TCTGATAAAAACAGGGCAACAGTCTACAAGTCTACCAGGAGATCAGCTGCAGCTAGGGACAGAGATCAAACAGGACATTTGCAACAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR CCA 90 bp | CAGCACCATGCATTTAAGGTGTATTGTGTTATTCATGGCCTGCTGTaGTGGGAGAGCTGGGTTTTCTTATTGTCAAAGTATATTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: QHHAFKVYCVIHGLL*WESWVFLLSKYIGF Trigger: GAAGCCAATATACTTTGACAATAAGAAAACCCAGCTCTCCCACCACAGCAGGCCATGAATAACACAATACACCTTAAATGCATGGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR TCA 90 bp | GGTATAGTAGCCTGGACTGGCATTGGTGTTATCTTAGGATCTACATaGTATCTGTCCATGAACTTCTGGCTTTTAGAGTCTCTGTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GIVAWTGIGVILGST*YLSMNFWLLESLLR Trigger: TCTCAACAGAGACTCTAAAAGCCAGAAGTTCATGGACAGATATCATGTAGATCCTAAGATAACACCAATGCCAGTCCAGGCTACTATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR TCA 90 bp | CTATGCAGGTTAGGCTCTTGTACCCTAAGTCTTGTCAGATCTTGCTaGTGTATGAGTAGAGTGTTGTCTTTTTGCAATGTTTTATCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LCRLGSCTLSLVRSC*CMSRVLSFCNVLSP Trigger: GGGAGATAAAACATTGCAAAAAGACAACACTCTACTCATACATCAGCAAGATCTGACAAGACTTAGGGTACAAGAGCCTAACCTGCATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR GCA 90 bp | TTTCTTATTGTCAAAGTATATTGGCTTCTGTTGGTTATGATTTTGTaGTTGCATCTTGCCAACTGGTTTTCTCTCCTGTTAGCTGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: FLIVKVYWLLLVMIL*LHLANWFSLLLAGL Trigger: CAAGCCAGCTAACAGGAGAGAAAACCAGTTGGCAAGATGCAAGCACAAAATCATAACCAACAGAAGCCAATATACTTTGACAATAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR CCA 90 bp | TCATATGGAGCACAGGCTCAAGAAGTGTTTGGATCCTTCATGTCCTaGAGTATATGTGAACTGAACAAGGCTTTCTATGGTAAAAATTTA | + |
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Preference number: 1 (lower is better) Translates to: SYGAQAQEVFGSFMS*SICELNKAFYGKNL Trigger: TAAATTTTTACCATAGAAAGCCTTGTTCAGTTCACATATACTCCAGGACATGAAGGATCCAAACACTTCTTGAGCCTGTGCTCCATATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR GCA 90 bp | CTGTCACATCATCGTTCACCTCATTGTAGCCACTCTCATTTATTTTaGACACAAACCCATATTTTCATCCTTCTGATATATCTGCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: LSHHRSPHCSHSHLF*TQTHIFILLIYLLY Trigger: ATAAAGCAGATATATCAGAAGGATGAAAATATGGGTTTGTGTGCAAAATAAATGAGAGTGGCTACAATGAGGTGAACGATGATGTGACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTTATCAGATCTCCTTGGAGCCCTGCAGATTGATTCCCTGGGTGCAGTAGCTGCAGGCAAGGTCATATaGAGCACAGGCTCAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: FLSDLLGALQIDSLGAVAAGKVI*STGSRS Trigger: ACTTCTTGAGCCTGTGCTCCATATGACCTTGCCTGC...AGCTACTGCACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGATCTGATAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTATCAGATCTCCTTGGAGCCCTGCAGATTGATTCCCTGGGTGCAGTAGCTGCTGAATGTGCAGTTTaGGAGAGAGGGCAAGATAGA | + |
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Preference number: 2 (lower is better) Translates to: FLSDLLGALQIDSLGAVAAECAV*ERGQDR Trigger: TCTATCTTGCCCTCTCTCTCAAACTGCACATTCAGC...AGCTACTGCACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGATCTGATAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGAGCAGCTGCAGGCAAGGTCATATGGAGCACAGGCTCAAGAAGTGTTTGGAACAGAGCATTTAGTATaGTATGTATCCACCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: LEQLQARSYGAQAQEVFGTEHLV*YVSTHL Trigger: CAGGTGGGTGGATACATAGCATACTAAATGCTCTGT...TCCAAACACTTCTTGAGCCTGTGCTCCATATGACCTTGCCTGCAGCTGCTCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTAGAATCCCACTTCTGCTaGGTATCTGCAGGGCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLESHFC*VSAGPH Trigger: ATGGGGCCCTGCAGATACCCAGCAGAAGTGGGATTC...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR CAA 90 bp | GCCTGCTGTGGTGGGAGAGCTGGGTTTTCTTATTGTCAAAGTATATaGGCTTCTGTTGGTTATGATTTTGTGCTTGCATCTTGCCAACTG | + |
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Preference number: 2 (lower is better) Translates to: ACCGGRAGFSYCQSI*ASVGYDFVLASCQL Trigger: CAGTTGGCAAGATGCAAGCACAAAATCATAACCAACAGAAGCCAATATACTTTGACAATAAGAAAACCCAGCTCTCCCACCACAGCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTATCAGATCTCCTTGGAGCCCTGCAGATTGATTCCCTGGGTGCAGTAGCTGGAGTATATGTGAACTaGACAAGGCTTTCTATGGTA | + |
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Preference number: 2 (lower is better) Translates to: FLSDLLGALQIDSLGAVAGVYVN*TRLSMV Trigger: TACCATAGAAAGCCTTGTTCAGTTCACATATACTCC...AGCTACTGCACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGATCTGATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTATCAGATCTCCTTGGAGCCCTGCAGATTGATTCCCTGGGTGCAGTAGCTGTGCCTATAACAGTTTaGTCCTGCAAAGATAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: FLSDLLGALQIDSLGAVAVPITV*SCKDSE Trigger: TTCACTATCTTTGCAGGATCAAACTGTTATAGGCAC...AGCTACTGCACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGATCTGATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTAATCTCCTTGGAGCCCTaGAGATTGATTCCCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLISLEP*RLIPWV Trigger: CACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGAT...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTATCCTACCTGTTGAGCTaGCTGCAGCATATCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLSYLLS*LQHISW Trigger: CCAGGAGATATGCTGCAGCCAGCTCAACAGGTAGGA...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTTATCAGATCTCCTTGGAGCCCTGCAGATTGATTCCCTGGGTGCAGTAGCTATACAGAAAGAGAGATaGCTTTCATGCATAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FLSDLLGALQIDSLGAVAIQKER*LSCIRE Trigger: CTCCCTTATGCATGAAAGCCATCTCTCTTTCTGTAT...AGCTACTGCACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGATCTGATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTATGCAAATGTCCTGTTTaGTCTCTGTCCCTAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLCKCPV*SLSLAA Trigger: TGCAGCTAGGGACAGAGATCAAACAGGACATTTGCA...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCACCTGGCTCCTCTCTCTaGGTTGTTGCAAATGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARAPGSSL*VVANVL Trigger: CAGGACATTTGCAACAACTCAGAGAGAGGAGCCAGG...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAGTTAGCTGGCTTGGGTaGCTCTTCATAGAACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARAVSWLG*LFIEPG Trigger: GCCAGGTTCTATGAAGAGTCACCCAAGCCAGCTAAC...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAATCTCCTTGGAGCCCTaGAGATTGATTCCCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARAISLEP*RLIPWV Trigger: CACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGAT...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCTTTGGTCAATACCTTTACTCTTGCTCAGTCATGTTTTTATTGAGTTTCGCAGGCAAGGTCATATaGAGCACAGGCTCAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: SAFGQYLYSCSVMFLLSFAGKVI*STGSRS Trigger: ACTTCTTGAGCCTGTGCTCCATATGACCTTGCCTGC...GAAACTCAATAAAAACATGACTGAGCAAGAGTAAAGGTATTGACCAAAGGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCACATGGCCTGCTGTGGTaGGAGAGCTGGGTTTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARAHGLLW*ESWVFL Trigger: TAAGAAAACCCAGCTCTCCCACCACAGCAGGCCATG...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCATCCTGGCAACCTTGCTaGATGTGCAGTTTGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARASWQPC*MCSLRE Trigger: CTCTCTCAAACTGCACATTCAGCAAGGTTGCCAGGA...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAGATGTTTGCTCTGTCACATCATCGTTCACCTCATTGTAGCCACTCTCATTGGATCCTTCATGTCCTaGAGTATATGTGAACTGAAC | + |
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Preference number: 2 (lower is better) Translates to: IRCLLCHIIVHLIVATLIGSFMS*SICELN Trigger: GTTCAGTTCACATATACTCCAGGACATGAAGGATCC...AATGAGAGTGGCTACAATGAGGTGAACGATGATGTGACAGAGCAAACATCTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | CACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATCCATGTGCAATATCCATGTGACCATGGCTaGTCTCTCTCTCTCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: HKHSKTFIAGSSKIHVQYPCDHG*SLSLLL Trigger: TAGAAGGAGAGAGAGAGACCAGCCATGGTCACATGG...ATATTGCACATGGATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAGAGAGATGGCTTTCATaGATAAGGGAGGAATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARAERWLS*IREESH Trigger: GTGGGATTCCTCCCTTATGCATGAAAGCCATCTCTC...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTACTACAATTATTTGGGTaGGTATCCTACCTGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLLQLFG*VSYLLS Trigger: GCTCAACAGGTAGGATACCCACCCAAATAATTGTAG...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTACTGATCCAATCTATTTaGTGTTCCAGAGGCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLLIQSI*CSRGFL Trigger: CAAGAAGCCTCTGGAACACCAAATAGATTGGATCAG...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR CAA 90 bp | GGATTAAAAACTTCATTGTCTCTGCTTAGTTTCTATTTCAGTGACTaGTCCATAGTTGACAGTGGGGTGTTGAAGTCTCCCACTACTATT | + |
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Preference number: 2 (lower is better) Translates to: GLKTSLSLLSFYFSD*SIVDSGVLKSPTTI Trigger: AATAGTAGTGGGAGACTTCAACACCCCACTGTCAACTATGGACAAGTCACTGAAATAGAAACTAAGCAGAGACAATGAAGTTTTTAATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGTTTTATCTGTGCCAAACACCAATGGACATAGCACTCACTTCTCAGATAGGAGTATATGTGAACTaGACAAGGCTTTCTATGGTA | + |
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Preference number: 2 (lower is better) Translates to: FLFYLCQTPMDIALTSQIGVYVN*TRLSMV Trigger: TACCATAGAAAGCCTTGTTCAGTTCACATATACTCC...TATCTGAGAAGTGAGTGCTATGTCCATTGGTGTTTGGCACAGATAAAACAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR GCA 90 bp | GACCAGAAGGTACATTGTCTTTTACTTAGTAGAGTATTACATCATTGGGGTAGAACAGAGCATTTAGTATaGTATGTATCCACCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: DQKVHCLLLSRVLHHWGRTEHLV*YVSTHL Trigger: CAGGTGGGTGGATACATAGCATACTAAATGCTCTGT...TCTACCCCAATGATGTAATACTCTACTAAGTAAAAGACAATGTACCTTCTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | GACCAGAAGGTACATTGTCTTTTACTTAGTAGAGTATTACATCATTGGGGTAGAGGAGTATATGTGAACTaGACAAGGCTTTCTATGGTA | + |
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Preference number: 2 (lower is better) Translates to: DQKVHCLLLSRVLHHWGRGVYVN*TRLSMV Trigger: TACCATAGAAAGCCTTGTTCAGTTCACATATACTCC...TCTACCCCAATGATGTAATACTCTACTAAGTAAAAGACAATGTACCTTCTGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCATGTGCAATATTCCTCAAAACAATGTGGGCAAGTCCATTATAGGCAAACACATCTCAGTCATTTGTaGAACCTCCATTATCTTACA | + |
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Preference number: 2 (lower is better) Translates to: IHVQYSSKQCGQVHYRQTHLSHL*NLHYLT Trigger: TGTAAGATAATGGAGGTTTCACAAATGACTGAGATG...TGTTTGCCTATAATGGACTTGCCCACATTGTTTTGAGGAATATTGCACATGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTACTTTTCATTGTGTCCTaGATTTCCTGTATGTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLLFIVS*ISCMFW Trigger: CCAAAACATACAGGAAATTCAGGACACAATGAAAAG...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTAATCTTAGGATCTACATaGTATCTGTCCATGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLILGST*YLSMNF Trigger: GAAGTTCATGGACAGATATCATGTAGATCCTAAGAT...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR GCA 90 bp | ATTAGATGTTTGCTCTGTCACATCATCGTTCACCTCATTGTAGCCACTCTCATTTATGTCTTTTCTCCCTaGTTTTTACATCAGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: IRCLLCHIIVHLIVATLIYVFSP*FLHQYV Trigger: CACATACTGATGTAAAAAGCAGGGAGAAAAGACATA...AATGAGAGTGGCTACAATGAGGTGAACGATGATGTGACAGAGCAAACATCTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTAGTGATTCTCTCCTTTTaGGTTTGTCGTAAGATGATT | + |
|
Preference number: 2 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLVILSF*VCRKMI Trigger: AATCATCTTACGACAAACGCAAAAGGAGAGAATCAC...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAGGATCCTTCATGTCCTaGAGTATATGTGAACTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARAGSFMS*SICELN Trigger: GTTCAGTTCACATATACTCCAGGACATGAAGGATCC...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAGAATGGTTCCACTTTTaGGTCATCCTCACCAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARAEWFHF*VILTRI Trigger: AATTCTGGTGAGGATGACCCAAAAGTGGAACCATTC...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATCCATGTGCAATATGAATGGTTCCACTTTTaGGTCATCCTCACCAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: HKHSKTFIAGSSKIHVQYEWFHF*VILTRI Trigger: AATTCTGGTGAGGATGACCCAAAAGTGGAACCATTC...ATATTGCACATGGATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCATGTGCAATATTCCTCAAAACAATGTGGGCAAGTCCATTATAGGCAAACAACTTATAAAGGCATTTaGCTGTATAATGTCTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: IHVQYSSKQCGQVHYRQTTYKGI*LYNVFS Trigger: GGAGAAGACATTATACAGGCAAATGCCTTTATAAGT...TGTTTGCCTATAATGGACTTGCCCACATTGTTTTGAGGAATATTGCACATGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTGTTTTATCTGTGCCAAACACCAATGGACATAGCACTCACTTCTCAGATAAGAGTGTTGTCTTTTTaGAATGTTTTATCTCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: FLFYLCQTPMDIALTSQIRVLSF*NVLSPK Trigger: CTTGGGAGATAAAACATTGCAAAAAGACAACACTCT...TATCTGAGAAGTGAGTGCTATGTCCATTGGTGTTTGGCACAGATAAAACAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCATGTGCAATATTCCTCAAAACAATGTGGGCAAGTCCATTATAGGCAAACATATGTCTTTTCTCCCTaGTTTTTACATCAGTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: IHVQYSSKQCGQVHYRQTYVFSP*FLHQYV Trigger: CACATACTGATGTAAAAAGCAGGGAGAAAAGACATA...TGTTTGCCTATAATGGACTTGCCCACATTGTTTTGAGGAATATTGCACATGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCACATCTCAGTCATTTGTaGAACCTCCATTATCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARAHLSHL*NLHYLT Trigger: TGTAAGATAATGGAGGTTTCACAAATGACTGAGATG...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCATCTCTGCTATCAGAGTaGATATTTCCAACTCAATTC | + |
|
Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARASLLSE*IFPTQF Trigger: GAATTGAGTTGGAAATATTCACTCTGATAGCAGAGA...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATCCATGTGCAATATACTTATAAAGGCATTTaGCTGTATAATGTCTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: HKHSKTFIAGSSKIHVQYTYKGI*LYNVFS Trigger: GGAGAAGACATTATACAGGCAAATGCCTTTATAAGT...ATATTGCACATGGATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR GCA 90 bp | TATTCTACCACAGCACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATACTTATAAAGGCATTTaGCTGTATAATGTCTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: YSTTAQAFKDIYSWKFQNTYKGI*LYNVFS Trigger: GGAGAAGACATTATACAGGCAAATGCCTTTATAAGT...ATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTGCTGTGGTAGAATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAAGAGTGTTGTCTTTTTaGAATGTTTTATCTCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARARVLSF*NVLSPK Trigger: CTTGGGAGATAAAACATTGCAAAAAGACAACACTCT...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAATTTCCTGTATGTTTTaGGTTGGGAGGATTTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: CPLSQHLFNIVLDFLARAISCMF*VGRIFV Trigger: AACAAAAATCCTCCCAACCCAAAACATACAGGAAAT...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CCA 72 bp | GTATCTGCAGGGCCCCATCTGCTACAATTATTTGGGTaGGTATCCTACCTGTTGAGCTGGCTGCAGCATATC | + |
|
Preference number: 3 (lower is better) Translates to: VSAGPHLLQLFG*VSYLLSWLQHI Trigger: GATATGCTGCAGCCAGCTCAACAGGTAGGATACCCACCCAAATAATTGTAGCAGATGGGGCCCTGCAGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR TCA 72 bp | ATCTGCTACAATTATTTGGGTGGGTATCCTACCTGTTaGGCTGGCTGCAGCATATCTCCTGGCAACCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ICYNYLGGYPTC*AGCSISPGNLA Trigger: AGCAAGGTTGCCAGGAGATATGCTGCAGCCAGCTCAACAGGTAGGATACCCACCCAAATAATTGTAGCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTATCAGATCTCCTTGGAGCCCTGCAGATTGATTCCCTGGGTGCAGTAGCTAGAATGGTTCCACTTTaGGGTCATCCTCACCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLSDLLGALQIDSLGAVARMVPL*GHPHQN Trigger: ATTCTGGTGAGGATGACCCAAAAGTGGAACCATTCT...AGCTACTGCACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGATCTGATAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR TCA 72 bp | AGCATATCTCCTGGCAACCTTGCTGAATGTGCAGTTTaGGAGAGAGGGCAAGATAGACTGATTTCCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SISPGNLAECAV*ERGQDRLISSQ Trigger: TTGGGAGGAAATCAGTCTATCTTGCCCTCTCTCTCAAACTGCACATTCAGCAAGGTTGCCAGGAGATATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CCA 72 bp | ATGCATACATCTAGAGCAGCTGCAGGCAAGGTCATATaGAGCACAGGCTCAAGAAGTGTTTGGATCCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: MHTSRAAAGKVI*STGSRSVWILH Trigger: ATGAAGGATCCAAACACTTCTTGAGCCTGTGCTCCATATGACCTTGCCTGCAGCTGCTCTAGATGTATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTATCAGATCTCCTTGGAGCCCTGCAGATTGATTCCCTGGGTGCAGTAGCTACCACACACATTGTGTaGAGGCCACTTTACTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLSDLLGALQIDSLGAVATTHIV*RPLYFN Trigger: ATTGAAGTAAAGTGGCCTCAACACAATGTGTGTGGT...AGCTACTGCACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGATCTGATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CCA 72 bp | CTGTTGGTTATGATTTTGTGCTTGCATCTTGCCAACTaGTTTTCTCTCCTGTTAGCTGGCTTGGGTGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLVMILCLHLAN*FSLLLAGLGDS Trigger: AGAGTCACCCAAGCCAGCTAACAGGAGAGAAAACCAGTTGGCAAGATGCAAGCACAAAATCATAACCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CCA 72 bp | GCACAGGCTCAAGAAGTGTTTGGATCCTTCATGTCCTaGAGTATATGTGAACTGAACAAGGCTTTCTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: AQAQEVFGSFMS*SICELNKAFYG Trigger: ACCATAGAAAGCCTTGTTCAGTTCACATATACTCCAGGACATGAAGGATCCAAACACTTCTTGAGCCTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR TCA 72 bp | GCCTGGACTGGCATTGGTGTTATCTTAGGATCTACATaGTATCTGTCCATGAACTTCTGGCTTTTAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AWTGIGVILGST*YLSMNFWLLES Trigger: AGACTCTAAAAGCCAGAAGTTCATGGACAGATATCATGTAGATCCTAAGATAACACCAATGCCAGTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR GCA 72 bp | ACCATGCATTTAAGGTGTATTGTGTTATTCATGGCCTaGTGTGGTGGGAGAGCTGGGTTTTCTTATTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TMHLRCIVLFMA*CGGRAGFSYCQ Trigger: TTGACAATAAGAAAACCCAGCTCTCCCACCACAGCAGGCCATGAATAACACAATACACCTTAAATGCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGTTTTATCTGTGCCAAACACCAATGGACATAGCACTCACTTCTCAGATAAGGCTCAAGAAGTGTTaGGATCCTTCATGTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FLFYLCQTPMDIALTSQIRLKKC*DPSCPG Trigger: TCCAGGACATGAAGGATCCAAACACTTCTTGAGCCT...TATCTGAGAAGTGAGTGCTATGTCCATTGGTGTTTGGCACAGATAAAACAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CCA 72 bp | GCATTTAAGGTGTATTGTGTTATTCATGGCCTGCTGTaGTGGGAGAGCTGGGTTTTCTTATTGTCAAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: AFKVYCVIHGLL*WESWVFLLSKY Trigger: ATACTTTGACAATAAGAAAACCCAGCTCTCCCACCACAGCAGGCCATGAATAACACAATACACCTTAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCATGTGCAATATTCCTCAAAACAATGTGGGCAAGTCCATTATAGGCAAACAAGAATGGTTCCACTTTaGGGTCATCCTCACCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: IHVQYSSKQCGQVHYRQTRMVPL*GHPHQN Trigger: ATTCTGGTGAGGATGACCCAAAAGTGGAACCATTCT...TGTTTGCCTATAATGGACTTGCCCACATTGTTTTGAGGAATATTGCACATGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCATGTGCAATATTCCTCAAAACAATGTGGGCAAGTCCATTATAGGCAAACACTAAAACAGAAGCCATaGGAGCAGAGATGTGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IHVQYSSKQCGQVHYRQTLKQKP*EQRCVE Trigger: CTCTACACATCTCTGCTCCAATGGCTTCTGTTTTAG...TGTTTGCCTATAATGGACTTGCCCACATTGTTTTGAGGAATATTGCACATGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTACCTCTCTCTGAGTTGTaGCAAATGTCCTGTTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLPLSEL*QMSCLI Trigger: GATCAAACAGGACATTTGCAACAACTCAGAGAGAGG...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTATTTTGTGCTTGCATCTaGCCAACTGGTTTTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLFCACI*PTGFLS Trigger: GGAGAGAAAACCAGTTGGCAAGATGCAAGCACAAAA...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTAACTTCAGCTTGTTTTTaGGGACCATTTGCTTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLTSACF*GPFAWV Trigger: CACCCAAGCAAATGGTCCCAAAAAACAAGCTGAAGT...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTACCACAGCACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATAGGCTCAAGAAGTGTTaGGATCCTTCATGTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: YSTTAQAFKDIYSWKFQNRLKKC*DPSCPG Trigger: TCCAGGACATGAAGGATCCAAACACTTCTTGAGCCT...ATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTGCTGTGGTAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGTTTTATCTGTGCCAAACACCAATGGACATAGCACTCACTTCTCAGATAGCATTTAACCAGTATTaGTGGTTACTTAGTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FLFYLCQTPMDIALTSQIAFNQY*WLLSLG Trigger: CCCAAGACTAAGTAACCACAAATACTGGTTAAATGC...TATCTGAGAAGTGAGTGCTATGTCCATTGGTGTTTGGCACAGATAAAACAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGTTTTATCTGTGCCAAACACCAATGGACATAGCACTCACTTCTCAGATATCCCATAGAAATGTCTaGACTATTGCGATGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: FLFYLCQTPMDIALTSQISHRNV*TIAMTL Trigger: AAGTGTCATCGCAATAGTCAAGACATTTCTATGGGA...TATCTGAGAAGTGAGTGCTATGTCCATTGGTGTTTGGCACAGATAAAACAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR TCA 72 bp | TTAGGCTCTTGTACCCTAAGTCTTGTCAGATCTTGCTaGTGTATGAGTAGAGTGTTGTCTTTTTGCAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGSCTLSLVRSC*CMSRVLSFCNV Trigger: AACATTGCAAAAAGACAACACTCTACTCATACATCAGCAAGATCTGACAAGACTTAGGGTACAAGAGCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR TCA 72 bp | TGTCAATGTCTTCTAAGGTATTTTCTACACCTGACCTaGTTGAAGAGAGCTTCAATCCCTTGTATTCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CQCLLRYFLHLT*LKRASIPCILL Trigger: CAACAGAATACAAGGGATTGAAGCTCTCTTCAATCAGGTCAGGTGTAGAAAATACCTTAGAAGACATTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR GCA 72 bp | GTTAGAACACATAGAAAATGTACAGAGCATTTAGTATaGTATGTATCCACCCACCTGTTAGCAAAAGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VRTHRKCTEHLV*YVSTHLLAKVE Trigger: CTCCACTTTTGCTAACAGGTGGGTGGATACATAGCATACTAAATGCTCTGTACATTTTCTATGTGTTCTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CCA 72 bp | TTTAAGGTGTATTGTGTTATTCATGGCCTGCTGTGGTaGGAGAGCTGGGTTTTCTTATTGTCAAAGTATATT | + |
|
Preference number: 3 (lower is better) Translates to: FKVYCVIHGLLW*ESWVFLLSKYI Trigger: AATATACTTTGACAATAAGAAAACCCAGCTCTCCCACCACAGCAGGCCATGAATAACACAATACACCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTACCACAGCACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATACCACACACATTGTGTaGAGGCCACTTTACTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: YSTTAQAFKDIYSWKFQNTTHIV*RPLYFN Trigger: ATTGAAGTAAAGTGGCCTCAACACAATGTGTGTGGT...ATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTGCTGTGGTAGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTAAATTCCTCCACCAGTTaGATTGTGTTTCTCTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLNSSTS*IVFLCI Trigger: AATACAGAGAAACACAATCAAACTGGTGGAGGAATT...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTAATCCCTTGTATTCTGTaGGTGATGCTTACATTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLIPCIL*VMLTFV Trigger: TACAAATGTAAGCATCACCAACAGAATACAAGGGAT...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCATCTGATCCAATCTATTaGGTGTTCCAGAGGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CPLSQHLFNIVLDFLARASDPIY*VFQRLL Trigger: AAGAAGCCTCTGGAACACCAAATAGATTGGATCAGA...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR TCA 72 bp | TGTTTGGATCCTTCATGTCCTGGAGTATATGTGAACTaGACAAGGCTTTCTATGGTAAAAATTTACCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: CLDPSCPGVYVN*TRLSMVKIYQH Trigger: ATGCTGGTAAATTTTTACCATAGAAAGCCTTGTTCAGTTCACATATACTCCAGGACATGAAGGATCCAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CCA 72 bp | TCTACCACAGCACAAGCATTCAAAGACATTTATAGCTaGAAGTTCCAAAATCCATGTGCAATATTCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: STTAQAFKDIYS*KFQNPCAIFLK Trigger: TTTGAGGAATATTGCACATGGATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTGCTGTGGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTACCACAGCACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATGCATTTAACCAGTATTaGTGGTTACTTAGTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YSTTAQAFKDIYSWKFQNAFNQY*WLLSLG Trigger: CCCAAGACTAAGTAACCACAAATACTGGTTAAATGC...ATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTGCTGTGGTAGAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAGCATTTAACCAGTATTaGTGGTTACTTAGTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CPLSQHLFNIVLDFLARAAFNQY*WLLSLG Trigger: CCCAAGACTAAGTAACCACAAATACTGGTTAAATGC...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCATCCCATAGAAATGTCTaGACTATTGCGATGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: CPLSQHLFNIVLDFLARASHRNV*TIAMTL Trigger: AAGTGTCATCGCAATAGTCAAGACATTTCTATGGGA...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTACCACAGCACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATTCCCATAGAAATGTCTaGACTATTGCGATGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: YSTTAQAFKDIYSWKFQNSHRNV*TIAMTL Trigger: AAGTGTCATCGCAATAGTCAAGACATTTCTATGGGA...ATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTGCTGTGGTAGAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAGTATATTGGCTTCTGTaGGTTATGATTTTGTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CPLSQHLFNIVLDFLARAVYWLL*VMILCL Trigger: CAAGCACAAAATCATAACCAACAGAAGCCAATATAC...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAATCCCTTGTATTCTGTaGGTGATGCTTACATTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: CPLSQHLFNIVLDFLARAIPCIL*VMLTFV Trigger: TACAAATGTAAGCATCACCAACAGAATACAAGGGAT...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR TCA 72 bp | ATATCCACACTGTTTTCTATAGTGCCTATAACAGTTTaGTCCTGCAAAGATAGTGAAGAATGGTTCCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: ISTLFSIVPITV*SCKDSEEWFHF Trigger: AAAGTGGAACCATTCTTCACTATCTTTGCAGGATCAAACTGTTATAGGCACTATAGAAAACAGTGTGGATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | CCTGTTGAGCTGGCTGCAGCATATCTCCTGGCAACCTaGCTGAATGTGCAGTTTGAGAGAGAGGGCAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: PVELAAAYLLAT*LNVQFEREGKI Trigger: TATCTTGCCCTCTCTCTCAAACTGCACATTCAGCAAGGTTGCCAGGAGATATGCTGCAGCCAGCTCAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CCA 90 bp | CTAGAGCAGCTGCAGGCAAGGTCATATGGAGCACAGGCTCAAGAAGTGTTTGGACCAACAGGAGTTTCTTaGGATGATAGTGATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEQLQARSYGAQAQEVFGPTGVS*DDSDGL Trigger: CAGACCATCACTATCATCCCAAGAAACTCCTGTTGG...TCCAAACACTTCTTGAGCCTGTGCTCCATATGACCTTGCCTGCAGCTGCTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | GGTAGGAAGTCAAGGCAGGAACTAAAACAGAAGCCATaGGAGCAGAGATGTGTAGAGCTTGCTCCAAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRKSRQELKQKP*EQRCVELAPNS Trigger: GCTATTTGGAGCAAGCTCTACACATCTCTGCTCCAATGGCTTCTGTTTTAGTTCCTGCCTTGACTTCCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTGTTTTATCTGTGCCAAACACCAATGGACATAGCACTCACTTCTCAGATACCAGGATGCTCTGAATaGCTCTGGATTCAGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFYLCQTPMDIALTSQIPGCSE*LWIQGC Trigger: GCACCCCTGAATCCAGAGCCATTCAGAGCATCCTGG...TATCTGAGAAGTGAGTGCTATGTCCATTGGTGTTTGGCACAGATAAAACAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGCTAAGCCAAGATGCCCACTTTCTCAACATCTATTCAATATAGTACTACCAGGATGCTCTGAATaGCTCTGGATTCAGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IWAKPRCPLSQHLFNIVLPGCSE*LWIQGC Trigger: GCACCCCTGAATCCAGAGCCATTCAGAGCATCCTGG...TAGTACTATATTGAATAGATGTTGAGAAAGTGGGCATCTTGGCTTAGCCCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | TTCCCTGGGTGCAGTAGCTCTGTAGAGTGTATGGTGTaGAAAGGGAAGGGAACAGAGGTTGATCTTTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPGCSSSVECMV*KGKGTEVDLFN Trigger: ATTAAAAAGATCAACCTCTGTTCCCTTCCCTTTCAACACCATACACTCTACAGAGCTACTGCACCCAGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | ACTTCATTGTCTCTGCTTAGTTTCTATTTCAGTGACTaGTCCATAGTTGACAGTGGGGTGTTGAAGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLSLLSFYFSD*SIVDSGVLKSP Trigger: GGGAGACTTCAACACCCCACTGTCAACTATGGACAAGTCACTGAAATAGAAACTAAGCAGAGACAATGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR TCA 90 bp | ATTAGATGTTTGCTCTGTCACATCATCGTTCACCTCATTGTAGCCACTCTCATTTGTGCCTATACAGAATaGCAATCACTGAGCTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRCLLCHIIVHLIVATLICAYTE*QSLSYL Trigger: CAGGTAGCTCAGTGATTGTCATTCTGTATAGGCACA...AATGAGAGTGGCTACAATGAGGTGAACGATGATGTGACAGAGCAAACATCTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTGTTTTATCTGTGCCAAACACCAATGGACATAGCACTCACTTCTCAGATATGTGCCTATACAGAATaGCAATCACTGAGCTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLFYLCQTPMDIALTSQICAYTE*QSLSYL Trigger: CAGGTAGCTCAGTGATTGTCATTCTGTATAGGCACA...TATCTGAGAAGTGAGTGCTATGTCCATTGGTGTTTGGCACAGATAAAACAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CCA 90 bp | ATCCATGTGCAATATTCCTCAAAACAATGTGGGCAAGTCCATTATAGGCAAACACCAACAGGAGTTTCTTaGGATGATAGTGATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHVQYSSKQCGQVHYRQTPTGVS*DDSDGL Trigger: CAGACCATCACTATCATCCCAAGAAACTCCTGTTGG...TGTTTGCCTATAATGGACTTGCCCACATTGTTTTGAGGAATATTGCACATGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTTTGGTCAATACCTTTACTCTTGCTCAGTCATGTTTTTATTGAGTTTCAGAGGAAGCAGAGTTTaGAGAGAGGGGATGATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAFGQYLYSCSVMFLLSFRGSRV*REGMID Trigger: GTCAATCATCCCCTCTCTCCAAACTCTGCTTCCTCT...GAAACTCAATAAAAACATGACTGAGCAAGAGTAAAGGTATTGACCAAAGGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTTTGGTCAATACCTTTACTCTTGCTCAGTCATGTTTTTATTGAGTTTCTGTGCCTATACAGAATaGCAATCACTGAGCTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAFGQYLYSCSVMFLLSFCAYTE*QSLSYL Trigger: CAGGTAGCTCAGTGATTGTCATTCTGTATAGGCACA...GAAACTCAATAAAAACATGACTGAGCAAGAGTAAAGGTATTGACCAAAGGCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAAGAGGAAGCAGAGTTTaGAGAGAGGGGATGATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPLSQHLFNIVLDFLARARGSRV*REGMID Trigger: GTCAATCATCCCCTCTCTCCAAACTCTGCTTCCTCT...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CCA 90 bp | TATTCTACCACAGCACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATAGAGGAAGCAGAGTTTaGAGAGAGGGGATGATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YSTTAQAFKDIYSWKFQNRGSRV*REGMID Trigger: GTCAATCATCCCCTCTCTCCAAACTCTGCTTCCTCT...ATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTGCTGTGGTAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | ACTCAGTTTATTTGTATACCCTTTGGCATTAGATGTTaGCTCTGTCACATCATCGTTCACCTCATTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQFICIPFGIRC*LCHIIVHLIVA Trigger: GGCTACAATGAGGTGAACGATGATGTGACAGAGCAAACATCTAATGCCAAAGGGTATACAAATAAACTGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCACCAACAGGAGTTTCTTaGGATGATAGTGATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPLSQHLFNIVLDFLARAPTGVS*DDSDGL Trigger: CAGACCATCACTATCATCCCAAGAAACTCCTGTTGG...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | TCTACACCTGACCTGATTGAAGAGAGCTTCAATCCCTaGTATTCTGTTGGTGATGCTTACATTTGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: STPDLIEESFNP*YSVGDAYICNF Trigger: GAAATTACAAATGTAAGCATCACCAACAGAATACAAGGGATTGAAGCTCTCTTCAATCAGGTCAGGTGTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTTTGGTCAATACCTTTACTCTTGCTCAGTCATGTTTTTATTGAGTTTCCTGGCATCCATATTATaGCTGAGAAAAACTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAFGQYLYSCSVMFLLSFLASIL*LRKTDF Trigger: GAAGTCAGTTTTTCTCAGTCATAATATGGATGCCAG...GAAACTCAATAAAAACATGACTGAGCAAGAGTAAAGGTATTGACCAAAGGCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | ATTGTTTTTACTTCCACTTTTAGGTCTTGGACTGCTTaGTTCAATTCCTCCACCAGTTTGATTGTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVFTSTFRSWTA*FNSSTSLIVFL Trigger: GAGAAACACAATCAAACTGGTGGAGGAATTGAACAAAGCAGTCCAAGACCTAAAAGTGGAAGTAAAAACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | CTTCTATTCCTATTAGTCTTAGGTTTGGTCTTTTCATaGTGTCCTGAATTTCCTGTATGTTTTGGGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFLLVLGLVFS*CPEFPVCFGLG Trigger: TCCCAACCCAAAACATACAGGAAATTCAGGACACAATGAAAAGACCAAACCTAAGACTAATAGGAATAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR TCA 90 bp | TATTCTACCACAGCACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATCTGGCATCCATATTATaGCTGAGAAAAACTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSTTAQAFKDIYSWKFQNLASIL*LRKTDF Trigger: GAAGTCAGTTTTTCTCAGTCATAATATGGATGCCAG...ATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTGCTGTGGTAGAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATCCATGTGCAATATCTGGCATCCATATTATaGCTGAGAAAAACTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKHSKTFIAGSSKIHVQYLASIL*LRKTDF Trigger: GAAGTCAGTTTTTCTCAGTCATAATATGGATGCCAG...ATATTGCACATGGATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCACAATGGACATACTCCTaGAAACCCTTAAAACATACA | + |
|
Preference number: 4 (lower is better) Translates to: CPLSQHLFNIVLDFLARAQWTYS*KPLKHT Trigger: TGTATGTTTTAAGGGTTTTCAGGAGTATGTCCATTG...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR TCA 90 bp | TATTCTACCACAGCACAAGCATTCAAAGACATTTATAGCTGGAAGTTCCAAAATCAATGGACATACTCCTaGAAACCCTTAAAACATACA | + |
|
Preference number: 4 (lower is better) Translates to: YSTTAQAFKDIYSWKFQNQWTYS*KPLKHT Trigger: TGTATGTTTTAAGGGTTTTCAGGAGTATGTCCATTG...ATTTTGGAACTTCCAGCTATAAATGTCTTTGAATGCTTGTGCTGTGGTAGAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | AATCTTCACGCTCTTCTATTCCTATTAGTCTTAGGTTaGGTCTTTTCATTGTGTCCTGAATTTCCTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: NLHALLFLLVLG*VFSLCPEFPVC Trigger: ACATACAGGAAATTCAGGACACAATGAAAAGACCAAACCTAAGACTAATAGGAATAGAAGAGCGTGAAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| 3UTR CAA 72 bp | TTTACATCAGTATGTGAAAGTATTTTAGTGTGGTTCTaGTTTTATCTGTGCCAAACACCAATGGACATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTSVCESILVWF*FYLCQTPMDIA Trigger: TGCTATGTCCATTGGTGTTTGGCACAGATAAAACAAGAACCACACTAAAATACTTTCACATACTGATGTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGATGTTTGCTCTGTCACATCATCGTTCACCTCATTGTAGCCACTCTCATTAGTACTGCGGACGTATaGAACTTGCTGTTTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IRCLLCHIIVHLIVATLISTADV*NLLFVP Trigger: AGGCACAAACAGCAAGTTCAATACGTCCGCAGTACT...AATGAGAGTGGCTACAATGAGGTGAACGATGATGTGACAGAGCAAACATCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTATCAGATCTCCTTGGAGCCCTGCAGATTGATTCCCTGGGTGCAGTAGCTTCATTAGCCACCAATTaGAACTGTGAAATAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLSDLLGALQIDSLGAVASLATN*NCEIEH Trigger: ATGCTCTATTTCACAGTTCAAATTGGTGGCTAATGA...AGCTACTGCACCCAGGGAATCAATCTGCAGGGCTCCAAGGAGATCTGATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CAA 90 bp | GACCAGAAGGTACATTGTCTTTTACTTAGTAGAGTATTACATCATTGGGGTAGAAGTACTGCGGACGTATaGAACTTGCTGTTTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DQKVHCLLLSRVLHHWGRSTADV*NLLFVP Trigger: AGGCACAAACAGCAAGTTCAATACGTCCGCAGTACT...TCTACCCCAATGATGTAATACTCTACTAAGTAAAAGACAATGTACCTTCTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCAAGTACTGCGGACGTATaGAACTTGCTGTTTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CPLSQHLFNIVLDFLARASTADV*NLLFVP Trigger: AGGCACAAACAGCAAGTTCAATACGTCCGCAGTACT...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS CCA 90 bp | GATGTACAAGACCCAGCAGAGAGAAATGCAGAGACTAATATTCTTTaGAGATTTGACTCTAATATTCTTCCAACAGGAGTTTCTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DVQDPAERNAETNIL*RFDSNILPTGVSWD Trigger: ATCCCAAGAAACTCCTGTTGGAAGAATATTAGAGTCAAATCTCCAAAGAATATTAGTCTCTGCATTTCTCTCTGCTGGGTCTTGTACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053974.2 ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS TCA 90 bp | AACAGATATATTATTCCTGTTCCCAAATTCCTGGCATCCATATTATaGCTGAGAAAAACTGACTTCAATATATGCCACCAAACACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NRYIIPVPKFLASIL*LRKTDFNICHQTLL Trigger: GAGAAGTGTTTGGTGGCATATATTGAAGTCAGTTTTTCTCAGTCATAATATGGATGCCAGGAATTTGGGAACAGGAATAATATATCTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053974.2 ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCACTTTCTCAACATCTATTCAATATAGTACTAGATTTTCTAGCTAGAGCATCATTAGCCACCAATTaGAACTGTGAAATAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPLSQHLFNIVLDFLARASLATN*NCEIEH Trigger: ATGCTCTATTTCACAGTTCAAATTGGTGGCTAATGA...TGCTCTAGCTAGAAAATCTAGTACTATATTGAATAGATGTTGAGAAAGTGGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS CAA 72 bp | GGTGCTGCTAGGGGAAGCATGAGTACTGCGGACGTATaGAACTTGCTGTTTGTGCCTATACAGAATGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: GAARGSMSTADV*NLLFVPIQNDN Trigger: ATTGTCATTCTGTATAGGCACAAACAGCAAGTTCAATACGTCCGCAGTACTCATGCTTCCCCTAGCAGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053974.2 ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
||
| CDS TCA 72 bp | ATTATTCCTGTTCCCAAATTCCTGGCATCCATATTATaGCTGAGAAAAACTGACTTCAATATATGCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: IIPVPKFLASIL*LRKTDFNICHQ Trigger: TTGGTGGCATATATTGAAGTCAGTTTTTCTCAGTCATAATATGGATGCCAGGAATTTGGGAACAGGAATAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053974.2 ENSMUST00000232909.2 ENSMUST00000233670.2 ENSMUST00000233939.2 |
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