RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R229 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000117148

Ensembl transcript IDs: ENSMUST00000076759.3, ENSMUST00000232810.2, ENSMUST00000232852.2, ENSMUST00000233712.2

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGACTCTCACCCATGTGGGAAACACCCAGCACTGCTTCTCCAGCTaGCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAGCTGCCCTCA +
Preference number: 1 (lower is better)
Translates to: RTLTHVGNTQHCFSS*PLLPLALGMTELPS
Trigger: TGAGGGCAGCTCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGGGTGTTTCCCACATGGGTGAGAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp TGTCTGGGATGCCCCAGACTGAGAACCTGCTATCTCTGGCCTCCGTaGGGCCCAGAGACCTTGGACTGCTTCTTATCCACCCCCTGGTGG +
Preference number: 1 (lower is better)
Translates to: CLGCPRLRTCYLWPP*GPETLDCFLSTPWW
Trigger: CCACCAGGGGGTGGATAAGAAGCAGTCCAAGGTCTCTGGGCCTCACGGAGGCCAGAGATAGCAGGTTCTCAGTCTGGGGCATCCCAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp TGGACCAGACGAAGGACTCTCACCCATGTGGGAAACACCCAGCACTaGTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACG +
Preference number: 1 (lower is better)
Translates to: WTRRRTLTHVGNTQH*FSSCPLLPLALGMT
Trigger: CGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGGGTGTTTCCCACATGGGTGAGAGTCCTTCGTCTGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp AGTGTAGGGGGATGCCAGGGATGGAAGAGGGAGTGGATGGCTGAGTaGGAGAGCTGCCTCAGAGTCATGGGGAAGGCGGAAGTGATAGGG +
Preference number: 1 (lower is better)
Translates to: SVGGCQGWKREWMAE*ESCLRVMGKAEVIG
Trigger: CCCTATCACTTCCGCCTTCCCCATGACTCTGAGGCAGCTCTCCCACTCAGCCATCCACTCCCTCTTCCATCCCTGGCATCCCCCTACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp TGTTGGACATCAGTGGGAGGAGAGGACCTTGGGCCTGAGTTTGTTTaGTGGCCCAGTGTAGGGGGATGCCAGGGATGGAAGAGGGAGTGG +
Preference number: 1 (lower is better)
Translates to: CWTSVGGEDLGPEFV*WPSVGGCQGWKREW
Trigger: CCACTCCCTCTTCCATCCCTGGCATCCCCCTACACTGGGCCATCAAACAAACTCAGGCCCAAGGTCCTCTCCTCCCACTGATGTCCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp ACACATAGAGAGACCCATGGCTGTGGTCACATATGTGGCAGTGGATaGCCCTGTTGGACATCAGTGGGAGGAGAGGACCTTGGGCCTGAG +
Preference number: 1 (lower is better)
Translates to: THRETHGCGHICGSG*PCWTSVGGEDLGPE
Trigger: CTCAGGCCCAAGGTCCTCTCCTCCCACTGATGTCCAACAGGGCCATCCACTGCCACATATGTGACCACAGCCATGGGTCTCTCTATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp AGGGAGCAGGAGCTGATGCAGAGGCCGTGGAGGGATGTTCCTTACTaGTTTGCTTCCCCTGGCTTGCTCAGCCTGCTCTGTTATAGAACC +
Preference number: 1 (lower is better)
Translates to: REQELMQRPWRDVPY*FASPGLLSLLCYRT
Trigger: GGTTCTATAACAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAACCAGTAAGGAACATCCCTCCACGGCCTCTGCATCAGCTCCTGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp GTAGCACACGCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTaGTGCTGCTGCTCTTGGTGGTCATCTCATGGTACTGGCATCTCC +
Preference number: 1 (lower is better)
Translates to: VAHASSSRLQMPVLH*CCCSWWSSHGTGIS
Trigger: GGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGCGTGTGCTAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp TTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACCTTCACCAATaGCCTTCCATGGCCTCTCAGAGTGCCTCAGCTGCTCTGTGTGAC +
Preference number: 1 (lower is better)
Translates to: LVLGCQLQLRLHLHQ*PSMASQSASAALCD
Trigger: GTCACACAGAGCAGCTGAGGCACTCTGAGAGGCCATGGAAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp TTCATGTCCTCTAGTCATGGACCAGACGAAGGACTCTCACCCATGTaGGAAACACCCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTT +
Preference number: 1 (lower is better)
Translates to: FMSSSHGPDEGLSPM*ETPSTASPAALSSL
Trigger: AAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGGGTGTTTCCCACATGGGTGAGAGTCCTTCGTCTGGTCCATGACTAGAGGACATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp GAGGCAGTCCTCCATGTTCACCTGCCCAGAGGACCTAAACTCTGGTaGACTTGGGTTTTCTCCCACTCCCTTTATTCCCCCACACCCACT +
Preference number: 1 (lower is better)
Translates to: EAVLHVHLPRGPKLW*TWVFSHSLYSPTPT
Trigger: AGTGGGTGTGGGGGAATAAAGGGAGTGGGAGAAAACCCAAGTTCACCAGAGTTTAGGTCCTCTGGGCAGGTGAACATGGAGGACTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp GTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGTTGGATCACAGGGCCCCCAATGGAG +
Preference number: 1 (lower is better)
Translates to: VSCETMPGPSKHRSG*SQSAIGWITGPPME
Trigger: CTCCATTGGGGGCCCTGTGATCCAACCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp CCATGGCCTCTCAGAGTGCCTCAGCTGCTCTGTGTGACCCCTTCATaGCTTCAAAACCAGTACCACCTGGGTGACCCTTACACATTACCA +
Preference number: 1 (lower is better)
Translates to: PWPLRVPQLLCVTPS*LQNQYHLGDPYTLP
Trigger: TGGTAATGTGTAAGGGTCACCCAGGTGGTACTGGTTTTGAAGGCATGAAGGGGTCACACAGAGCAGCTGAGGCACTCTGAGAGGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp GCTGCTCTTGGTGGTCATCTCATGGTACTGGCATCTCCCAAACACTaGATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: AALGGHLMVLASPKH*MTPLVLGCQLQLRL
Trigger: CAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTTGGGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp TCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTaGTGGTCATCTCATGGTACTGGCATCTCCCAAACACTGCATGAC +
Preference number: 1 (lower is better)
Translates to: SSRLQMPVLHCCCCS*WSSHGTGISQTLHD
Trigger: GTCATGCAGTGTTTGGGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp ATGTCTGGGATCCAACTAACGATCTTCTGGGCTCCTCCAAGGGCTTaGGTCATTTCTCCAGCCATTTCCTTTGTAGCACACGCATCGTCC +
Preference number: 1 (lower is better)
Translates to: MSGIQLTIFWAPPRA*VISPAISFVAHASS
Trigger: GGACGATGCGTGTGCTACAAAGGAAATGGCTGGAGAAATGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGTTAGTTGGATCCCAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp CAGTACCCCGGAGCTCTTGACTCTAGCTGCAAATGTATCAAAAGATaGCCTAGTTGGCCATCACTGGAAAGAGAGGCCCATTGGAGTTGC +
Preference number: 1 (lower is better)
Translates to: QYPGALDSSCKCIKR*PSWPSLEREAHWSC
Trigger: GCAACTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACATTTGCAGCTAGAGTCAAGAGCTCCGGGGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp CCTTCCAGAGAAGGATCCATCCCATATACAGCCACCAAACCCAGATaGTATTGTGGATGCAGGGAAGTGCTTGCTCATAGAAGCCTGATA +
Preference number: 1 (lower is better)
Translates to: PSREGSIPYTATKPR*YCGCREVLAHRSLI
Trigger: TATCAGGCTTCTATGAGCAAGCACTTCCCTGCATCCACAATAGCATCTGGGTTTGGTGGCTGTATATGGGATGGATCCTTCTCTGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp TGCTATTGTGGATGCAGGGAAGTGCTTGCTCATAGAAGCCTGATATaGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAG +
Preference number: 1 (lower is better)
Translates to: CYCGCREVLAHRSLI*LTPERLCQSLTNTE
Trigger: CTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAGGCTTCTATGAGCAAGCACTTCCCTGCATCCACAATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp GACCCTTACACATTACCAAGGCCCGCTGCAGAAGGAGTAGAACCTTaGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACT +
Preference number: 1 (lower is better)
Translates to: DPYTLPRPAAEGVEP*LSLEHSLFVLSENT
Trigger: AGTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACTCCTTCTGCAGCGGGCCTTGGTAATGTGTAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp CCTGGCAACAACAAGGTAGCCCAGCCTACTATAAAAGGGGCTGTTTaGTCCCTCCTCTCTCTCTTTAAGCTCTCACCTTTCTTACTCTCA +
Preference number: 1 (lower is better)
Translates to: PGNNKVAQPTIKGAV*SLLSLFKLSPFLLS
Trigger: TGAGAGTAAGAAAGGTGAGAGCTTAAAGAGAGAGAGGAGGGACCAAACAGCCCCTTTTATAGTAGGCTGGGCTACCTTGTTGTTGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp GTACTGGTAGTAGTAATGCACTCTCCTAGAGTAAGGAAAGAACCCTaGTGGGGGCCATCCTCAGCAGGGAGTTCTTTCTTGTCAGTTCTT +
Preference number: 1 (lower is better)
Translates to: VLVVVMHSPRVRKEP*WGPSSAGSSFLSVL
Trigger: AAGAACTGACAAGAAAGAACTCCCTGCTGAGGATGGCCCCCATCAGGGTTCTTTCCTTACTCTAGGAGAGTGCATTACTACTACCAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp AGAAGTTTGGGGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTaGTGTTCATCACCAGTGAAGTCAGGACTGGAACTCAAGCAGGGT +
Preference number: 1 (lower is better)
Translates to: RSLGRKGFIRLTLPY*CSSPVKSGLELKQG
Trigger: ACCCTGCTTGAGTTCCAGTCCTGACTTCACTGGTGATGAACAGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAAACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATaGACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCAAATGT +
Preference number: 1 (lower is better)
Translates to: QGAKGICNPIGGTTL*TNQYPGALDSSCKC
Trigger: ACATTTGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp AGCTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGTACCCAGATATAGCTGTCTCTTGTGAGACTATGCCGGGG +
Preference number: 1 (lower is better)
Translates to: SFQTLTPLHTLARFC*KYPDIAVSCETMPG
Trigger: CCCCGGCATAGTCTCACAAGAGACAGCTATATCTGGGTACTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp GGTACAACCACTCTGGAAATCTGTCTGGTGGTTCCTCAGAAAATTTaGCATAGTACTACCTTAGGACCCAACTATACCATTCCTGGGCAC +
Preference number: 1 (lower is better)
Translates to: GTTTLEICLVVPQKI*HSTTLGPNYTIPGH
Trigger: GTGCCCAGGAATGGTATAGTTGGGTCCTAAGGTAGTACTATGTCAAATTTTCTGAGGAACCACCAGACAGATTTCCAGAGTGGTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp GGAGCTCTTGACTCTAGCTGCAAATGTATCAAAAGATGGCCTAGTTaGCCATCACTGGAAAGAGAGGCCCATTGGAGTTGCAAACTTTAT +
Preference number: 1 (lower is better)
Translates to: GALDSSCKCIKRWPS*PSLEREAHWSCKLY
Trigger: ATAAAGTTTGCAACTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACATTTGCAGCTAGAGTCAAGAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp TTCTTGTCAGTTCTTTTTGAGGCAGCAGAGGGTGAAGAGCAGAGGTaGAGGGTAAGACTTGGTCTTATGAAATACCGGGTTAAGACTTTG +
Preference number: 1 (lower is better)
Translates to: FLSVLFEAAEGEEQR*RVRLGLMKYRVKTL
Trigger: CAAAGTCTTAACCCGGTATTTCATAAGACCAAGTCTTACCCTCCACCTCTGCTCTTCACCCTCTGCTGCCTCAAAAAGAACTGACAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp ATGGAGAGAGAGGAACACTCCTTCATTGCTGATGGGATTGCAAGTTaGTACAACCACTCTGGAAATCTGTCTGGTGGTTCCTCAGAAAAT +
Preference number: 1 (lower is better)
Translates to: MEREEHSFIADGIAS*YNHSGNLSGGSSEN
Trigger: ATTTTCTGAGGAACCACCAGACAGATTTCCAGAGTGGTTGTACCAACTTGCAATCCCATCAGCAATGAAGGAGTGTTCCTCTCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp GGCCAAGATCAAAAACTCAGGAGACATCAGATGCTGGTGAGAATATaGAGAGAGAGGAACACTCCTTCATTGCTGATGGGATTGCAAGTT +
Preference number: 1 (lower is better)
Translates to: GQDQKLRRHQMLVRI*RERNTPSLLMGLQV
Trigger: AACTTGCAATCCCATCAGCAATGAAGGAGTGTTCCTCTCTCTCCATATTCTCACCAGCATCTGATGTCTCCTGAGTTTTTGATCTTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp AAAATATGCACAGGAGGAAATATGGAGAAAAAGTGTGGAGCAGACTaGAGGAAAGGCCTTCCAGAGAAGGATCCATCCCATATACAGCCA +
Preference number: 1 (lower is better)
Translates to: KICTGGNMEKKCGAD*RKGLPEKDPSHIQP
Trigger: TGGCTGTATATGGGATGGATCCTTCTCTGGAAGGCCTTTCCTTCAGTCTGCTCCACACTTTTTCTCCATATTTCCTCCTGTGCATATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp AATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTaGAGCTGTGATGAAAGGATGGACCATCTAGAGACTGCCATATCC +
Preference number: 1 (lower is better)
Translates to: NWEQNTHGRSYRDKV*SCDERMDHLETAIS
Trigger: GGATATGGCAGTCTCTAGATGGTCCATCCTTTCATCACAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp CAAGCCCAACGTTCCAAAGTCCGTCCACAGTCCTCAGTCTTCCATTaGTCTTCAATAACAACAAAAACAAAGGAAAGCCCACATACACAT +
Preference number: 1 (lower is better)
Translates to: QAQRSKVRPQSSVFH*SSITTKTKESPHTH
Trigger: ATGTGTATGTGGGCTTTCCTTTGTTTTTGTTGTTATTGAAGACCAATGGAAGACTGAGGACTGTGGACGGACTTTGGAACGTTGGGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp ACGGTGCTGGTTGAACTGGTGGTTAGTATGGAGAAGAATGCAAATTaGTCCATTCTTATGACCCTGTACAAAGCTCAAGTCCAACTGGAT +
Preference number: 1 (lower is better)
Translates to: TVLVELVVSMEKNAN*SILMTLYKAQVQLD
Trigger: ATCCAGTTGGACTTGAGCTTTGTACAGGGTCATAAGAATGGATCAATTTGCATTCTTCTCCATACTAACCACCAGTTCAACCAGCACCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp AACTGGTGGTTAGTATGGAGAAGAATGCAAATTGATCCATTCTTATaGCCCTGTACAAAGCTCAAGTCCAACTGGATCAAGGACCTACAC +
Preference number: 1 (lower is better)
Translates to: NWWLVWRRMQIDPFL*PCTKLKSNWIKDLH
Trigger: GTGTAGGTCCTTGATCCAGTTGGACTTGAGCTTTGTACAGGGTCATAAGAATGGATCAATTTGCATTCTTCTCCATACTAACCACCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 90 bp TTACTGACTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATaGCCAAGAAGAAGTTTGGGGAGGAAAGGGTTTATTCGGCTTACA +
Preference number: 1 (lower is better)
Translates to: LLTVLVRVSIPAQTS*PRRSLGRKGFIRLT
Trigger: TGTAAGCCGAATAAACCCTTTCCTCCCCAAACTTCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAGTCAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp CTAGGTTGTAGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTaGAAGCTGGTACAAACACTCTGGAAATCTAGCAGTTACATTTAT +
Preference number: 1 (lower is better)
Translates to: LGCRERGTLLHCWWD*KLVQTLWKSSSYIY
Trigger: ATAAATGTAACTGCTAGATTTCCAGAGTGTTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCTACAACCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp TCATCAATGCATATTACTGACTGTCTTAGTCAGGGTTTCTATTCCTaGACAAACATCATGACCAAGAAGAAGTTTGGGGAGGAAAGGGTT +
Preference number: 1 (lower is better)
Translates to: SSMHITDCLSQGFYS*TNIMTKKKFGEERV
Trigger: AACCCTTTCCTCCCCAAACTTCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAGTCAGTAATATGCATTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp ACAAAGGAATGGATAAAGAAAATATGGGACATTTGCACAATGGGATaGCACTCAGCTATGAGTAACAATGACTTTGTGAAATTCACAGGC +
Preference number: 1 (lower is better)
Translates to: TKEWIKKIWDICTMG*HSAMSNNDFVKFTG
Trigger: GCCTGTGAATTTCACAAAGTCATTGTTACTCATAGCTGAGTGGCATCCCATTGTGCAAATGTCCCATATTTTCTTTATCCATTCCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp CACTCAGCTATGAGTAACAATGACTTTGTGAAATTCACAGGCAAATaGCTGGAACGTGAAAATATCATCTTGAGTGAGGTAACTCACTTA +
Preference number: 1 (lower is better)
Translates to: HSAMSNNDFVKFTGK*LERENIILSEVTHL
Trigger: TAAGTGAGTTACCTCACTCAAGATGATATTTTCACGTTCCAGCCATTTGCCTGTGAATTTCACAAAGTCATTGTTACTCATAGCTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp AAGCAACCCAGATGTTCTTCAACAAAGGAATGGATAAAGAAAATATaGGACATTTGCACAATGGGATGCCACTCAGCTATGAGTAACAAT +
Preference number: 1 (lower is better)
Translates to: KQPRCSSTKEWIKKI*DICTMGCHSAMSNN
Trigger: ATTGTTACTCATAGCTGAGTGGCATCCCATTGTGCAAATGTCCCATATTTTCTTTATCCATTCCTTTGTTGAAGAACATCTGGGTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp CGCAAGCTGTACTACAGAGCAATAGTGATAAAAACTGCATTGTATTaGTACAGTGAAAGGCAGGTAGATCAATGGAATGGAATTAAAGAC +
Preference number: 1 (lower is better)
Translates to: RKLYYRAIVIKTALY*YSERQVDQWNGIKD
Trigger: GTCTTTAATTCCATTCCATTGATCTACCTGCCTTTCACTGTACCAATACAATGCAGTTTTTATCACTATTGCTCTGTAGTACAGCTTGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp AGATGTTCTTCAACAAAGGAATGGATAAAGAAAATATGGGACATTTaGACAATGGGATGCCACTCAGCTATGAGTAACAATGACTTTGTG +
Preference number: 1 (lower is better)
Translates to: RCSSTKEWIKKIWDI*TMGCHSAMSNNDFV
Trigger: CACAAAGTCATTGTTACTCATAGCTGAGTGGCATCCCATTGTGCAAATGTCCCATATTTTCTTTATCCATTCCTTTGTTGAAGAACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp GTACAGATTCATGCATACTCTTATGTATTTCTATTCAAGCCCAGTTaGGTCCAGATTGCATGGATTCTCACAATTACATACTTACACATC +
Preference number: 1 (lower is better)
Translates to: VQIHAYSYVFLFKPS*VQIAWILTITYLHI
Trigger: GATGTGTAAGTATGTAATTGTGAGAATCCATGCAATCTGGACCCAACTGGGCTTGAATAGAAATACATAAGAGTATGCATGAATCTGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 90 bp ATAAAAACTGCATTGTATTGGTACAGTGAAAGGCAGGTAGATCAATaGAATGGAATTAAAGACCCAAAAATTAACCCACACACCTATGGT +
Preference number: 1 (lower is better)
Translates to: IKTALYWYSERQVDQ*NGIKDPKINPHTYG
Trigger: ACCATAGGTGTGTGGGTTAATTTTTGGGTCTTTAATTCCATTCCATTGATCTACCTGCCTTTCACTGTACCAATACAATGCAGTTTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 90 bp TGCATACTCTTATGTATTTCTATTCAAGCCCAGTTGGGTCCAGATTaGATGGATTCTCACAATTACATACTTACACATCCATACTTAAAT +
Preference number: 1 (lower is better)
Translates to: CILLCISIQAQLGPD*MDSHNYILTHPYLN
Trigger: ATTTAAGTATGGATGTGTAAGTATGTAATTGTGAGAATCCATGCAATCTGGACCCAACTGGGCTTGAATAGAAATACATAAGAGTATGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCCTGTTGGACATCAGTaGGAGGAGAGGACCTTGGGC +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAPVGHQ*EERTLG
Trigger: GCCCAAGGTCCTCTCCTCCCACTGATGTCCAACAGG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGACTACCATCCCAGAGATaGCACCACCCACAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGLPSQR*HHPQGA
Trigger: GGCCCCTTGTGGGTGGTGCCATCTCTGGGATGGTAG...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGATTCTTATCCACCCCCTaGTGGGCTGGGGTCCATGGC +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGFLSTP*WAGVHG
Trigger: GCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAA...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGTGGATGGCCCTGTTaGACATCAGTGGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTASGWPC*TSVGGE
Trigger: CTCTCCTCCCACTGATGTCCAACAGGGCCATCCACT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCACCAATGGCCTTCCATaGCCTCTCAGAGTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTATNGLP*PLRVPQ
Trigger: CTGAGGCACTCTGAGAGGCCATGGAAGGCCATTGGT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGAGGGAGTGGATGGCTaGGTGGGAGAGCTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWEGVDG*VGELPQ
Trigger: CTGAGGCAGCTCTCCCACTCAGCCATCCACTCCCTC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCAACTAACGATCTTCTaGGCTCCTCCAAGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAQLTIF*APPRAW
Trigger: CCAAGCCCTTGGAGGAGCCCAGAAGATCGTTAGTTG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCTGACCTGCTTTCTATaGTCCTCTGAGGCCAAAGAC +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTALTCFL*SSEAKD
Trigger: GTCTTTGGCCTCAGAGGATCATAGAAAGCAGGTCAG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCGGACCTAAACTCTGGTaGACTTGGGTTTTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAGPKLW*TWVFSH
Trigger: GTGGGAGAAAACCCAAGTTCACCAGAGTTTAGGTCC...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCAGGCCTCCATCTTCTaGGCTGTTCTCCACATAATC +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAQASIF*AVLHII
Trigger: GATTATGTGGAGAACAGCGCAGAAGATGGAGGCCTG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACCCTGTACTTCACTGCTaGTGCTGCTCTTGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHPVLHC*CCSWWS
Trigger: TGACCACCAAGAGCAGCAGCAGCAGTGAAGTACAGG...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAAGAGACCCATGGCTGTaGTCACATATGTGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGRDPWL*SHMWQW
Trigger: CCACTGCCACATATGTGACCACAGCCATGGGTCTCT...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACGGCTTTGTCAGAGCCTaGCAAATACAGAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHGFVRA*QIQRQM
Trigger: CATCTGCCTCTGTATTTGTCAGGCTCTGACAAAGCC...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCGACATCAGATGCTGGTaGGAATATGGAGAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTADIRCW*EYGERG
Trigger: TCCTCTCTCTCCATATTCTCACCAGCATCTGATGTC...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAGCTGTTCATCACCAGTaGAGTCAGGACTGGAACTCA +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGAVHHQ*SQDWNS
Trigger: TGAGTTCCAGTCCTGACTTCACTGGTGATGAACAGC...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTGCAGCACCATGGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGAGCTCCCTGTTGGACATCAGTaGGAGGAGAGGACCTTGGGC +
Preference number: 2 (lower is better)
Translates to: LQHHGGSNSIKRPEPQELPVGHQ*EERTLG
Trigger: GCCCAAGGTCCTCTCCTCCCACTGATGTCCAACAGG...GAGCTCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAGGCTTTGCAGCACCATaGTGGGAGCAACAGTATCAA +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGGFAAP*WEQQYQ
Trigger: TTGATACTGTTGCTCCCACCATGGTGCTGCAAAGCC...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCGTCATCTCATGGTACTaGCATCTCCCAAACACTGCA +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAVISWY*HLPNTA
Trigger: TGCAGTGTTTGGGAGATGCCAGTACCATGAGATGAC...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 90 bp CCCTTTGGCCCTAGGGATGACGGAGCTGCCCTCAGGGACCCCATTTaGCTTTCAGCTCTTTCGAAGTGTCTAGTTGTGTCTGGGATGCCC +
Preference number: 2 (lower is better)
Translates to: PFGPRDDGAALRDPI*LSALSKCLVVSGMP
Trigger: GGGCATCCCAGACACAACTAGACACTTCGAAAGAGCTGAAAGCAAAATGGGGTCCCTGAGGGCAGCTCCGTCATCCCTAGGGCCAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCACTAGCCAGTACAATTaGCCCCTTGTCAACTTGACA +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTATSQYN*PLVNLT
Trigger: TGTCAAGTTGACAAGGGGTCAATTGTACTGGCTAGT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTGCAGCACCATGGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGAGCTCCTCACAGTCAGCTATTaGTTGGATCACAGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: LQHHGGSNSIKRPEPQELLTVSY*LDHRAP
Trigger: GGGGGCCCTGTGATCCAACCAATAGCTGACTGTGAG...GAGCTCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTGGAAGAGGGAGTGGATaGCTGAGTGGGAGAGCTGCC +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTGRGSG*LSGRAA
Trigger: GGCAGCTCTCCCACTCAGCCATCCACTCCCTCTTCC...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTGCAGCACCATGGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGAGCTCAGTGGATGGCCCTGTTaGACATCAGTGGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: LQHHGGSNSIKRPEPQELSGWPC*TSVGGE
Trigger: CTCTCCTCCCACTGATGTCCAACAGGGCCATCCACT...GAGCTCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACTTTGCAGCACCATGGTaGGAGCAACAGTATCAAGAG +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHFAAPW*EQQYQE
Trigger: CTCTTGATACTGTTGCTCCCACCATGGTGCTGCAAA...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCATGCTGGTGAGAATATaGAGAGAGAGGAACACTCCT +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAMLVRI*RERNTP
Trigger: AGGAGTGTTCCTCTCTCTCCATATTCTCACCAGCAT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACCGGTGCTGGTTGAACTaGTGGTTAGTATGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHRCWLN*WLVWRR
Trigger: TCTTCTCCATACTAACCACCAGTTCAACCAGCACCG...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACGAAGGAGTAGAACCTTaGCTATCTCTGGAACACAGC +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHEGVEP*LSLEHS
Trigger: GCTGTGTTCCAGAGATAGCCAAGGTTCTACTCCTTC...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTTTATCCACCCCCTGGTaGGCTGGGGTCCATGGCTTC +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTLSTPW*AGVHGF
Trigger: GAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACCTCACTCCCTCTGGATaGAAAATGAGCTCCAATCTT +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHLTPSG*KMSSNL
Trigger: AAGATTGGAGCTCATTTTTCATCCAGAGGGAGTGAG...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGACTCACTCCCTCTGGATaGAAAATGAGCTCCAATCTT +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGLTPSG*KMSSNL
Trigger: AAGATTGGAGCTCATTTTTCATCCAGAGGGAGTGAG...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCATATGGAGCAAAAGATaGAGCACTCACTGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAIWSKR*STHCRK
Trigger: TTTCCTGCAGTGAGTGCTTCATCTTTTGCTCCATAT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCAGAGGGAGTGGATGGCTaGGTGGGAGAGCTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LIWLTPERLCQSLTNTEAEGVDG*VGELPQ
Trigger: CTGAGGCAGCTCTCCCACTCAGCCATCCACTCCCTC...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCAGTTGGGTCCAGATTaGATGGATTCTCACAATTAC +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAQLGPD*MDSHNY
Trigger: GTAATTGTGAGAATCCATGCAATCTGGACCCAACTG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACGGACCTGAGGGGCTTTaGAGCACCATGGTGGGAGCA +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHGPEGL*STMVGA
Trigger: TGCTCCCACCATGGTGCTGCAAAGCCCCTCAGGTCC...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCCACACACCTATGGTTaGTTGATCTTTGATGAAGGA +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAPHTYG*LIFDEG
Trigger: TCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCTTACACTTCCATACTaGTGTTCATCACCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTALTLPY*CSSPVK
Trigger: CTTCACTGGTGATGAACAGCAGTATGGAAGTGTAAG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGACCATCATGTGATGTATaGTGGCCATGTCATCTTGTC +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGPSCDV*WPCHLV
Trigger: GACAAGATGACATGGCCAGCATACATCACATGATGG...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTGGAAACACCCAGCACTaGTTCTCCAGCTGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTGNTQH*FSSCPL
Trigger: GAGAGGGCAGCTGGAGAAGCAGTGCTGGGTGTTTCC...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGCAGTCAGCTATTGGTTaGATCACAGGGCCCCCAATG +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWQSAIG*ITGPPM
Trigger: CATTGGGGGCCCTGTGATCCAACCAATAGCTGACTG...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACGGAAGAGGGAGTGGATaGCTGAGTGGGAGAGCTGCC +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHGRGSG*LSGRAA
Trigger: GGCAGCTCTCCCACTCAGCCATCCACTCCCTCTTCC...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAGCACAGGAGGAAATATaGAGAAAAAGTGTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGAQEEI*RKSVEQ
Trigger: CTGCTCCACACTTTTTCTCCATATTTCCTCCTGTGC...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACTTGGTACAACCACTCTaGAAATCTGTCTGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHLVQPL*KSVWWF
Trigger: GAACCACCAGACAGATTTCCAGAGTGGTTGTACCAA...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACGAAAGAGCCAATACTTaGAGCAGAGGTAAACTGTGG +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHERANT*SRGKLW
Trigger: CCACAGTTTACCTCTGCTCCAAGTATTGGCTCTTTC...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCTAGCAAGATTTTGCTaGAAGTACCCAGATATAGCT +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTALARFC*KYPDIA
Trigger: AGCTATATCTGGGTACTTTCAGCAAAATCTTGCTAG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACCCTCTGGATGAAAAATaGGCTCCAATCTTTCTTGCA +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHPLDEK*APIFLA
Trigger: TGCAAGAAAGATTGGAGCTCATTTTTCATCCAGAGG...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCGTAACAATGACTTTGTaGAATTCACAGGCAAATGGC +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAVTMTL*NSQANG
Trigger: GCCATTTGCCTGTGAATTTCACAAAGTCATTGTTAC...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCGCTCTTGACTCTAGCTaGAAATGTATCAAAAGATGG +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAALDSS*KCIKRW
Trigger: CCATCTTTTGATACATTTGCAGCTAGAGTCAAGAGC...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGT +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGKHRSG*SQSAIG
Trigger: ACCAATAGCTGACTGTGAGCATCCACTTCTGTGTTT...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAATTTGCACAATGGGATaGCACTCAGCTATGAGTAAC +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGICTMG*HSAMSN
Trigger: GTTACTCATAGCTGAGTGGCATCCCATTGTGCAAAT...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAAACACAGCCTCTTTGTaGTTTCAGAAAACACTTCCC +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGNTASL*FQKTLP
Trigger: GGGAAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTT...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACCAGGGTTTCTATTCCTaGACAAACATCATGACCAAG +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHQGFYS*TNIMTK
Trigger: CTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTG...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTCTCACAGTCAGCTATTaGTTGGATCACAGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTLTVSY*LDHRAP
Trigger: GGGGGCCCTGTGATCCAACCAATAGCTGACTGTGAG...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAAAACTCACTCCCTCTaGATGAAAAATGAGCTCCAA +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAKTHSL*MKNELQ
Trigger: TTGGAGCTCATTTTTCATCCAGAGGGAGTGAGTTTT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGGTGAAGAGCAGAGGTaGAGGGTAAGACTTGGTCTT +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWGEEQR*RVRLGL
Trigger: AAGACCAAGTCTTACCCTCCACCTCTGCTCTTCACC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACTCTGAAGGGAAGATCTaGAAAGGGGAAAACATTTGG +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHSEGKI*KGENIW
Trigger: CCAAATGTTTTCCCCTTTCCAGATCTTCCCTTCAGA...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCATAATATCCCAAAGCTaGAAGCAACCCAGATGTTCT +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAIISQS*KQPRCS
Trigger: AGAACATCTGGGTTGCTTCCAGCTTTGGGATATTAT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACCAACCATCCAATGTCTaGGATCCAACTAACGATCTT +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHQPSNV*DPTNDL
Trigger: AAGATCGTTAGTTGGATCCCAGACATTGGATGGTTG...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGATCATGTGATGTATGCTaGCCATGTCATCTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGSCDVC*PCHLVR
Trigger: TCTGACAAGATGACATGGCCAGCATACATCACATGA...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp TTGCAGCACCATGGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGAGCTCGTGATAGGGAGTTTCTaGAGGGAAGATCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: LQHHGGSNSIKRPEPQELVIGSF*REDLER
Trigger: CCTTTCCAGATCTTCCCTTCAGAAACTCCCTATCAC...GAGCTCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACGTAACAATGACTTTGTaGAATTCACAGGCAAATGGC +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHVTMTL*NSQANG
Trigger: GCCATTTGCCTGTGAATTTCACAAAGTCATTGTTAC...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGCTCCAATCTTTCTTaGATAGGGAAAGAAAAAGTG +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTASSNLS*IGKEKV
Trigger: CACTTTTTCTTTCCCTATGCAAGAAAGATTGGAGCT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTATGCCTGTACTTCACTaGTGCTGCTGCTCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTMPVLH*CCCSWW
Trigger: CCACCAAGAGCAGCAGCAGCAGTGAAGTACAGGCAT...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACGAAAGAGAGGCCCATTaGAGTTGCAAACTTTATATG +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHEREAH*SCKLYM
Trigger: CATATAAAGTTTGCAACTCCAATGGGCCTCTCTTTC...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACTACAGAGACAAAGTTTaGAGCTGTGATGAAAGGATG +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHYRDKV*SCDERM
Trigger: CATCCTTTCATCACAGCTCCAAACTTTGTCTCTGTA...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGATGGGTCCAGATTGCATaGATTCTCACAATTACATAC +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGWVQIA*ILTITY
Trigger: GTATGTAATTGTGAGAATCCATGCAATCTGGACCCA...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCTGGTACAAACACTCTaGAAATCTAGCAGTTACATT +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTALVQTL*KSSSYI
Trigger: AATGTAACTGCTAGATTTCCAGAGTGTTTGTACCAG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACACCAATGGCCTTCCATaGCCTCTCAGAGTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHTNGLP*PLRVPQ
Trigger: CTGAGGCACTCTGAGAGGCCATGGAAGGCCATTGGT...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCCACCCCCTGGTGGGCTaGGGTCCATGGCTTCCCACA +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGHPLVG*GPWLPT
Trigger: TGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTG...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACAAGTGTGGAGCAGACTaGAGGAAAGGCCTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHKCGAD*RKGLPE
Trigger: CTCTGGAAGGCCTTTCCTTCAGTCTGCTCCACACTT...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAGTTCCTCAGAAAATTTaGCATAGTACTACCTTAGGA +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGVPQKI*HSTTLG
Trigger: TCCTAAGGTAGTACTATGTCAAATTTTCTGAGGAAC...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACAGCTCCAATCTTTCTTaGATAGGGAAAGAAAAAGTG +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHSSNLS*IGKEKV
Trigger: CACTTTTTCTTTCCCTATGCAAGAAAGATTGGAGCT...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACTCCATATTGTCCAAATaGCTCTTACTTGTCAAGCTA +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHSILSK*LLLVKL
Trigger: TAGCTTGACAAGTAAGAGGCATTTGGACAATATGGA...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTCTTCACTGCTGCTGCTaGTCTTGGTGGTCATCTCAT +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTLHCCC*SWWSSH
Trigger: ATGAGATGACCACCAAGAGCAGCAGCAGCAGTGAAG...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTCTAGTTGGCCATCACTaGAAAGAGAGGCCCATTGGA +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTLVGHH*KERPIG
Trigger: TCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAG...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCACTCACAGTCAGCTATTaGTTGGATCACAGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: LIWLTPERLCQSLTNTEALTVSY*LDHRAP
Trigger: GGGGGCCCTGTGATCCAACCAATAGCTGACTGTGAG...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTGGTGAAGAGCAGAGGTaGAGGGTAAGACTTGGTCTT +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTGEEQR*RVRLGL
Trigger: AAGACCAAGTCTTACCCTCCACCTCTGCTCTTCACC...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGGAGCTCCCAGGAACTaGACCATCAACAAAAAGAAT +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWGAPRN*TINKKN
Trigger: ATTCTTTTTGTTGATGGTCCAGTTCCTGGGAGCTCC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGCACAGGAGGAAATATaGAGAAAAAGTGTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWAQEEI*RKSVEQ
Trigger: CTGCTCCACACTTTTTCTCCATATTTCCTCCTGTGC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACAAATTCACAGGCAAATaGCTGGAACGTGAAAATATC +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHKFTGK*LERENI
Trigger: GATATTTTCACGTTCCAGCCATTTGCCTGTGAATTT...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAAAATTCACAGGCAAATaGCTGGAACGTGAAAATATC +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGKFTGK*LERENI
Trigger: GATATTTTCACGTTCCAGCCATTTGCCTGTGAATTT...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAAAATGCCTTACAGTTaGATCTCATGGAGGTATTTT +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAKMPYS*ISWRYF
Trigger: AAAATACCTCCATGAGATCCAACTGTAAGGCATTTT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCGTAACTCTAGTGATTTaGTTCACATATCACCTTGTA +
Preference number: 2 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAVTLVI*FTYHLV
Trigger: TACAAGGTGATATGTGAACCAAATCACTAGAGTTAC...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTCCTGCACAAACATCATaGCCAAGAAGAAGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTPAQTS*PRRSLG
Trigger: CCCCAAACTTCTTCTTGGTCATGATGTTTGTGCAGG...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACCAGGCCTCCATCTTCTaGGCTGTTCTCCACATAATC +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHQASIF*AVLHII
Trigger: GATTATGTGGAGAACAGCGCAGAAGATGGAGGCCTG...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAGTAAAGCAAAGGTTTTaGTTTAGTACTTCTGGTATC +
Preference number: 2 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGVKQRF*FSTSGI
Trigger: GATACCAGAAGTACTAAAGCAAAACCTTTGCTTTAC...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGTCTGAAGGGAAGATCTaGAAAGGGGAAAACATTTGG +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWSEGKI*KGENIW
Trigger: CCAAATGTTTTCCCCTTTCCAGATCTTCCCTTCAGA...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACGGAAGAGGGAGTGGATaGCTGAGTGGGAGAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHGRGSG*LSGRAA
Trigger: GGCAGCTCTCCCACTCAGCCATCCACTCCCTCTTCC...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACACAACACTTTCCAAATaGGATCTCATAAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHTTLSK*DLIKLQ
Trigger: TTGCAGTTTTATGAGATCCCATTTGGAAAGTGTTGT...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACAACTGGTGGTTAGTATaGAGAAGAATGCAAATTGAT +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHNWWLV*RRMQID
Trigger: ATCAATTTGCATTCTTCTCCATACTAACCACCAGTT...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACATTCTCAAATTCATTTaGAATAACCAAAACCCCAGG +
Preference number: 2 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHILKFI*NNQNPR
Trigger: CCTGGGGTTTTGGTTATTCCAAATGAATTTGAGAAT...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCCTACCATCCCAGAGATaGCACCACCCACAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGLPSQR*HHPQGA
Trigger: GGCCCCTTGTGGGTGGTGCCATCTCTGGGATGGTAG...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCGTGGGCTGGGGTCCATaGCTTCCCACAGCCAGATAC +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGVGWGP*LPTARY
Trigger: GTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCAC...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTAAGATTCTGGCATTCTaGCTAGACTCCACCCCAACA +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTKILAF*LDSTPT
Trigger: TGTTGGGGTGGAGTCTAGCCAGAATGCCAGAATCTT...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGATTGATCCATTCTTATaGCCCTGTACAAAGCTCAAG +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWIDPFL*PCTKLK
Trigger: CTTGAGCTTTGTACAGGGTCATAAGAATGGATCAAT...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTCATTGTTGGTGGGATTaGAAGCTGGTACAAACACTC +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTHCWWD*KLVQTL
Trigger: GAGTGTTTGTACCAGCTTGCAATCCCACCAACAATG...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGATGTCACCTCAACAATaGTGGTCTCTTCTTAATCAC +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWMSPQQ*WSLLNH
Trigger: GTGATTAAGAAGAGACCAGCATTGTTGAGGTGACAT...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGAAAGAGAGGCCCATTaGAGTTGCAAACTTTATATG +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWEREAH*SCKLYM
Trigger: CATATAAAGTTTGCAACTCCAATGGGCCTCTCTTTC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCCCTGTTGGACATCAGTaGGAGGAGAGGACCTTGGGC +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGPVGHQ*EERTLG
Trigger: GCCCAAGGTCCTCTCCTCCCACTGATGTCCAACAGG...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGATAATATCCCAAAGCTaGAAGCAACCCAGATGTTCT +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWIISQS*KQPRCS
Trigger: AGAACATCTGGGTTGCTTCCAGCTTTGGGATATTAT...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTTTGGTACAACCACTCTaGAAATCTGTCTGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTLVQPL*KSVWWF
Trigger: GAACCACCAGACAGATTTCCAGAGTGGTTGTACCAA...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACCGGTGCTGGTTGAACTaGTGGTTAGTATGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHRCWLN*WLVWRR
Trigger: TCTTCTCCATACTAACCACCAGTTCAACCAGCACCG...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGAAAAGCTGGATGAGATaGACAATTTTCGAGACAGAC +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWKSWMR*TIFETD
Trigger: GTCTGTCTCGAAAATTGTCCATCTCATCCAGCTTTT...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGTTCCTCAGAAAATTTaGCATAGTACTACCTTAGGA +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWVPQKI*HSTTLG
Trigger: TCCTAAGGTAGTACTATGTCAAATTTTCTGAGGAAC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTAAGCCCACATACACATaGAAGCTGAACAATGCTCTA +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTKPTYT*KLNNAL
Trigger: TAGAGCATTGTTCAGCTTTCATGTGTATGTGGGCTT...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCAGTTGCAAACTTTATATaGCCCAGTACAGGGGAACGC +
Preference number: 2 (lower is better)
Translates to: LIWLTPERLCQSLTNTEAVANFI*PSTGER
Trigger: GCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAC...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGCAAGAATCTTTCCTTaGTTAATAAGGGCACAGATT +
Preference number: 2 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWARIFP*LIRAQI
Trigger: AATCTGTGCCCTTATTAAGCAAGGAAAGATTCTTGC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTCAGGGTTTCTATTCCTaGACAAACATCATGACCAAG +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTQGFYS*TNIMTK
Trigger: CTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTG...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp TTGCAGCACCATGGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGAGCTCCTGGTACAAACACTCTaGAAATCTAGCAGTTACATT +
Preference number: 2 (lower is better)
Translates to: LQHHGGSNSIKRPEPQELLVQTL*KSSSYI
Trigger: AATGTAACTGCTAGATTTCCAGAGTGTTTGTACCAG...GAGCTCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTGACCAAGAAGAAGTTTaGGGAGGAAAGGGTTTATTC +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTDQEEV*GGKGLF
Trigger: GAATAAACCCTTTCCTCCCCAAACTTCTTCTTGGTC...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTTCATGTGATGTATGCTaGCCATGTCATCTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTSCDVC*PCHLVR
Trigger: TCTGACAAGATGACATGGCCAGCATACATCACATGA...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTATTGTATTGGTACAGTaGAAGGCAGGTAGATCAATG +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTIVLVQ*KAGRSM
Trigger: CATTGATCTACCTGCCTTTCACTGTACCAATACAAT...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACCAGTTGGGTCCAGATTaGATGGATTCTCACAATTAC +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHQLGPD*MDSHNY
Trigger: GTAATTGTGAGAATCCATGCAATCTGGACCCAACTG...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACATTTGCACAATGGGATaGCACTCAGCTATGAGTAAC +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHICTMG*HSAMSN
Trigger: GTTACTCATAGCTGAGTGGCATCCCATTGTGCAAAT...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACAACACAGCCTCTTTGTaGTTTCAGAAAACACTTCCC +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHNTASL*FQKTLP
Trigger: GGGAAGTGTTTTCTGAAAGCACAAAGAGGCTGTGTT...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTTGGAAATCTGTCTGGTaGTTCCTCAGAAAATTTGAC +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTWKSVW*FLRKFD
Trigger: GTCAAATTTTCTGAGGAACCACCAGACAGATTTCCA...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCAATATGGAGCAAAAGATaGAGCACTCACTGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: LIWLTPERLCQSLTNTEAIWSKR*STHCRK
Trigger: TTTCCTGCAGTGAGTGCTTCATCTTTTGCTCCATAT...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGAGGGAGTGGATGGCTaGGTGGGAGAGCTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNEGVDG*VGELPQ
Trigger: CTGAGGCAGCTCTCCCACTCAGCCATCCACTCCCTC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACAAAATGGGCAGCAGTTaGGAAGCAACTAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHKMGSS*EATKEM
Trigger: CATTTCTTTAGTTGCTTCTCAACTGCTGCCCATTTT...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACGAAGCAGTGCTAAGATaGAAATTCATAGCTCTGAGT +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHEAVLR*KFIALS
Trigger: ACTCAGAGCTATGAATTTTCATCTTAGCACTGCTTC...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATCCAGAGACAGGTGCCTaGCACCACAGAGCCCCCAAC +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNPETGA*HHRAPN
Trigger: GTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGG...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCAAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGT +
Preference number: 2 (lower is better)
Translates to: LIWLTPERLCQSLTNTEAKHRSG*SQSAIG
Trigger: ACCAATAGCTGACTGTGAGCATCCACTTCTGTGTTT...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTGCAAGAATCTTTCCTTaGTTAATAAGGGCACAGATT +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTARIFP*LIRAQI
Trigger: AATCTGTGCCCTTATTAAGCAAGGAAAGATTCTTGC...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGCTAGTTGGCCATCACTaGAAAGAGAGGCCCATTGGA +
Preference number: 2 (lower is better)
Translates to: ELGTKHPWKELQRQSLELLVGHH*KERPIG
Trigger: TCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAG...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AGACCCTTTCAAGATGATCACCTGTTAGTTTTTAGCTTGTCCCATTATGGCTCCCAGTCAGCTATTGGTTaGATCACAGGGCCCCCAATG +
Preference number: 2 (lower is better)
Translates to: RPFQDDHLLVFSLSHYGSQSAIG*ITGPPM
Trigger: CATTGGGGGCCCTGTGATCCAACCAATAGCTGACTG...GGAGCCATAATGGGACAAGCTAAAAACTAACAGGTGATCATCTTGAAAGGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACTGGGTCCAGATTGCATaGATTCTCACAATTACATAC +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHWVQIA*ILTITY
Trigger: GTATGTAATTGTGAGAATCCATGCAATCTGGACCCA...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCATCTGAAGGGAAGATCTaGAAAGGGGAAAACATTTGG +
Preference number: 2 (lower is better)
Translates to: LIWLTPERLCQSLTNTEASEGKI*KGENIW
Trigger: CCAAATGTTTTCCCCTTTCCAGATCTTCCCTTCAGA...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCGGCTTTGCAGCACCATaGTGGGAGCAACAGTATCAA +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGGFAAP*WEQQYQ
Trigger: TTGATACTGTTGCTCCCACCATGGTGCTGCAAAGCC...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 90 bp CATCAGATGCTGGTGAGAATATGGAGAGAGAGGAACACTCCTTCATaGCTGATGGGATTGCAAGTTGGTACAACCACTCTGGAAATCTGT +
Preference number: 2 (lower is better)
Translates to: HQMLVRIWRERNTPS*LMGLQVGTTTLEIC
Trigger: ACAGATTTCCAGAGTGGTTGTACCAACTTGCAATCCCATCAGCAATGAAGGAGTGTTCCTCTCTCTCCATATTCTCACCAGCATCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCGTGATAGGGAGTTTCTaGAGGGAAGATCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGVIGSF*REDLER
Trigger: CCTTTCCAGATCTTCCCTTCAGAAACTCCCTATCAC...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGGTTGCAAACTTTATATaGCCCAGTACAGGGGAACGC +
Preference number: 2 (lower is better)
Translates to: ELGTKHPWKELQRQSLELVANFI*PSTGER
Trigger: GCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAC...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTAGGGAAAATTTAATGTaGAGAACATCAGTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTRENLM*RTSVAY
Trigger: ATAAGCCACTGATGTTCTGCACATTAAATTTTCCCT...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCATACAGAGACAAAGTTTaGAGCTGTGATGAAAGGATG +
Preference number: 2 (lower is better)
Translates to: LIWLTPERLCQSLTNTEAYRDKV*SCDERM
Trigger: CATCCTTTCATCACAGCTCCAAACTTTGTCTCTGTA...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTAACTGGTGGTTAGTATaGAGAAGAATGCAAATTGAT +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTNWWLV*RRMQID
Trigger: ATCAATTTGCATTCTTCTCCATACTAACCACCAGTT...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACCGGTGCTGGTTGAACTaGTGGTTAGTATGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHRCWLN*WLVWRR
Trigger: TCTTCTCCATACTAACCACCAGTTCAACCAGCACCG...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCGTCATCTCATGGTACTaGCATCTCCCAAACACTGCA +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGVISWY*HLPNTA
Trigger: TGCAGTGTTTGGGAGATGCCAGTACCATGAGATGAC...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTGTAACTCTAGTGATTTaGTTCACATATCACCTTGTA +
Preference number: 2 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTVTLVI*FTYHLV
Trigger: TACAAGGTGATATGTGAACCAAATCACTAGAGTTAC...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 90 bp TCAAGCCCAACGTTCCAAAGTCCGTCCACAGTCCTCAGTCTTCCATaGGTCTTCAATAACAACAAAAACAAAGGAAAGCCCACATACACA +
Preference number: 2 (lower is better)
Translates to: SSPTFQSPSTVLSLP*VFNNNKNKGKPTYT
Trigger: TGTGTATGTGGGCTTTCCTTTGTTTTTGTTGTTATTGAAGACCAATGGAAGACTGAGGACTGTGGACGGACTTTGGAACGTTGGGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTAAGTGTGGAGCAGACTaGAGGAAAGGCCTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPKCGAD*RKGLPE
Trigger: CTCTGGAAGGCCTTTCCTTCAGTCTGCTCCACACTT...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTAGAGACCCATGGCTGTaGTCACATATGTGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPRDPWL*SHMWQW
Trigger: CCACTGCCACATATGTGACCACAGCCATGGGTCTCT...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACTGGATAAAGAAAATATaGGACATTTGCACAATGGGA +
Preference number: 2 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHWIKKI*DICTMG
Trigger: TCCCATTGTGCAAATGTCCCATATTTTCTTTATCCA...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACTTGGTACAACCACTCTaGAAATCTGTCTGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHLVQPL*KSVWWF
Trigger: GAACCACCAGACAGATTTCCAGAGTGGTTGTACCAA...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACCCTCTGGATGAAAAATaGGCTCCAATCTTTCTTGCA +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHPLDEK*APIFLA
Trigger: TGCAAGAAAGATTGGAGCTCATTTTTCATCCAGAGG...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACATATGGAGCAAAAGATaGAGCACTCACTGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHIWSKR*STHCRK
Trigger: TTTCCTGCAGTGAGTGCTTCATCTTTTGCTCCATAT...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCAAGCCCACATACACATaGAAGCTGAACAATGCTCTA +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGKPTYT*KLNNAL
Trigger: TAGAGCATTGTTCAGCTTTCATGTGTATGTGGGCTT...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTGCCACCAAACCCAGATaGTATTGTGGATGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPATKPR*YCGCRE
Trigger: TTCCCTGCATCCACAATAGCATCTGGGTTTGGTGGC...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACATTTGCACAATGGGATaGCACTCAGCTATGAGTAAC +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHICTMG*HSAMSN
Trigger: GTTACTCATAGCTGAGTGGCATCCCATTGTGCAAAT...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACCCACACACCTATGGTTaGTTGATCTTTGATGAAGGA +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHPHTYG*LIFDEG
Trigger: TCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGG...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCCTTACACTTCCATACTaGTGTTCATCACCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGLTLPY*CSSPVK
Trigger: CTTCACTGGTGATGAACAGCAGTATGGAAGTGTAAG...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTGGTGAAGAGCAGAGGTaGAGGGTAAGACTTGGTCTT +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPGEEQR*RVRLGL
Trigger: AAGACCAAGTCTTACCCTCCACCTCTGCTCTTCACC...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACTATGGAGAAAAAGTGTaGAGCAGACTGAAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHYGEKV*SRLKER
Trigger: CCTTTCCTTCAGTCTGCTCCACACTTTTTCTCCATA...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATACCAATGGCCTTCCATaGCCTCTCAGAGTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNTNGLP*PLRVPQ
Trigger: CTGAGGCACTCTGAGAGGCCATGGAAGGCCATTGGT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 90 bp AAACGCATGAAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTaGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTT +
Preference number: 2 (lower is better)
Translates to: KRMKLKKNEDQSVDT*PLLRIGNKTPMEGV
Trigger: AACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGAGTTTCATGCGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 90 bp TTTGTGAAATTCACAGGCAAATGGCTGGAACGTGAAAATATCATCTaGAGTGAGGTAACTCACTTACAAGAGGACACACACGGTATGGAC +
Preference number: 2 (lower is better)
Translates to: FVKFTGKWLERENII*SEVTHLQEDTHGMD
Trigger: GTCCATACCGTGTGTGTCCTCTTGTAAGTGAGTTACCTCACTCAAGATGATATTTTCACGTTCCAGCCATTTGCCTGTGAATTTCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACCTAGCAAGATTTTGCTaGAAGTACCCAGATATAGCT +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHLARFC*KYPDIA
Trigger: AGCTATATCTGGGTACTTTCAGCAAAATCTTGCTAG...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTGTGATAGGGAGTTTCTaGAGGGAAGATCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPVIGSF*REDLER
Trigger: CCTTTCCAGATCTTCCCTTCAGAAACTCCCTATCAC...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACAAAATGGGCAGCAGTTaGGAAGCAACTAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHKMGSS*EATKEM
Trigger: CATTTCTTTAGTTGCTTCTCAACTGCTGCCCATTTT...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACGAAGCAGTGCTAAGATaGAAATTCATAGCTCTGAGT +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHEAVLR*KFIALS
Trigger: ACTCAGAGCTATGAATTTTCATCTTAGCACTGCTTC...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGGCTCTTGACTCTAGCTaGAAATGTATCAAAAGATGG +
Preference number: 2 (lower is better)
Translates to: ELGTKHPWKELQRQSLELALDSS*KCIKRW
Trigger: CCATCTTTTGATACATTTGCAGCTAGAGTCAAGAGC...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGGAAAGAGAGGCCCATTaGAGTTGCAAACTTTATATG +
Preference number: 2 (lower is better)
Translates to: ELGTKHPWKELQRQSLELEREAH*SCKLYM
Trigger: CATATAAAGTTTGCAACTCCAATGGGCCTCTCTTTC...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTTTTGCAGCACCATGGTaGGAGCAACAGTATCAAGAG +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPFAAPW*EQQYQE
Trigger: CTCTTGATACTGTTGCTCCCACCATGGTGCTGCAAA...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAATTTGCAGCACCATGGTaGGAGCAACAGTATCAAGAG +
Preference number: 2 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKFAAPW*EQQYQE
Trigger: CTCTTGATACTGTTGCTCCCACCATGGTGCTGCAAA...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACATAATATCCCAAAGCTaGAAGCAACCCAGATGTTCT +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHIISQS*KQPRCS
Trigger: AGAACATCTGGGTTGCTTCCAGCTTTGGGATATTAT...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCTGGAAATCTGTCTGGTaGTTCCTCAGAAAATTTGAC +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGWKSVW*FLRKFD
Trigger: GTCAAATTTTCTGAGGAACCACCAGACAGATTTCCA...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAACTCACTCCCTCTGGATaGAAAATGAGCTCCAATCTT +
Preference number: 2 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKLTPSG*KMSSNL
Trigger: AAGATTGGAGCTCATTTTTCATCCAGAGGGAGTGAG...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGCTGTTCATCACCAGTaGAGTCAGGACTGGAACTCA +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNAVHHQ*SQDWNS
Trigger: TGAGTTCCAGTCCTGACTTCACTGGTGATGAACAGC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AGACCCTTTCAAGATGATCACCTGTTAGTTTTTAGCTTGTCCCATTATGGCTCCGCTCTTGACTCTAGCTaGAAATGTATCAAAAGATGG +
Preference number: 2 (lower is better)
Translates to: RPFQDDHLLVFSLSHYGSALDSS*KCIKRW
Trigger: CCATCTTTTGATACATTTGCAGCTAGAGTCAAGAGC...GGAGCCATAATGGGACAAGCTAAAAACTAACAGGTGATCATCTTGAAAGGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCTCCATATTGTCCAAATaGCTCTTACTTGTCAAGCTA +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGSILSK*LLLVKL
Trigger: TAGCTTGACAAGTAAGAGGCATTTGGACAATATGGA...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACAGGATGAACAAAATATaGACAGGAGGAAATATGGAG +
Preference number: 2 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHRMNKI*TGGNME
Trigger: CTCCATATTTCCTCCTGTGCATATTTTGTTCATCCT...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATCTTCACTGCTGCTGCTaGTCTTGGTGGTCATCTCAT +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNLHCCC*SWWSSH
Trigger: ATGAGATGACCACCAAGAGCAGCAGCAGCAGTGAAG...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATTTGCTTCCCCTGGCTTaGTCAGCCTGCTCTGTTATA +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNLLPLA*SACSVI
Trigger: TATAACAGAGCAGGCTGAGCAAGCCAGGGGAAGCAA...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGGCTTTGCAGCACCATaGTGGGAGCAACAGTATCAA +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNGFAAP*WEQQYQ
Trigger: TTGATACTGTTGCTCCCACCATGGTGCTGCAAAGCC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCCTGGAAAAGAATCAGTaGAAGAAGAGACATAGGAAA +
Preference number: 2 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGLEKNQ*KKRHRK
Trigger: TTTCCTATGTCTCTTCTTCCACTGATTCTTTTCCAG...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTGAAACTCAAGAAGAATaGAGACCAAAGTGTGGACAC +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPETQEE*RPKCGH
Trigger: GTGTCCACACTTTGGTCTTCATTCTTCTTGAGTTTC...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAAAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGT +
Preference number: 2 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKKHRSG*SQSAIG
Trigger: ACCAATAGCTGACTGTGAGCATCCACTTCTGTGTTT...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTCAGTTGGGTCCAGATTaGATGGATTCTCACAATTAC +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPQLGPD*MDSHNY
Trigger: GTAATTGTGAGAATCCATGCAATCTGGACCCAACTG...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 90 bp TCCATATTGTCCAAATGCCTCTTACTTGTCAAGCTAGGGGGAAGTTaGGAGCAAGAAAATTCTATTGAACCAGGAGAAGAGAATAATACT +
Preference number: 2 (lower is better)
Translates to: SILSKCLLLVKLGGS*EQENSIEPGEENNT
Trigger: AGTATTATTCTCTTCTCCTGGTTCAATAGAATTTTCTTGCTCCAAACTTCCCCCTAGCTTGACAAGTAAGAGGCATTTGGACAATATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAAAACATCAGTGGCTTATaGTCCAAGAACAACACTTTC +
Preference number: 2 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKNISGL*SKNNTF
Trigger: GAAAGTGTTGTTCTTGGAGCATAAGCCACTGATGTT...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAATACAGAGACAAAGTTTaGAGCTGTGATGAAAGGATG +
Preference number: 2 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKYRDKV*SCDERM
Trigger: CATCCTTTCATCACAGCTCCAAACTTTGTCTCTGTA...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTCACACCAGTCAAGAATaGCTAAGATCAAATAGTCAG +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPHTSQE*LRSNSQ
Trigger: CTGACTATTTGATCTTAGCCATTCTTGACTGGTGTG...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATATGCTGGTGAGAATATaGAGAGAGAGGAACACTCCT +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNMLVRI*RERNTP
Trigger: AGGAGTGTTCCTCTCTCTCCATATTCTCACCAGCAT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTAGGCAGGTAGATCAATaGAATGGAATTAAAGACCCA +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPRQVDQ*NGIKDP
Trigger: TGGGTCTTTAATTCCATTCCATTGATCTACCTGCCT...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATATAAAAGGGGCTGTTTaGTCCCTCCTCTCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNIKGAV*SLLSLF
Trigger: AAAGAGAGAGAGGAGGGACCAAACAGCCCCTTTTAT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGTTTCTAAAATGATCTaGGTGAGGAAGGGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNVSKMI*VRKGVG
Trigger: TCCCACACCCTTCCTCACCCAGATCATTTTAGAAAC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGAAACTCAAGAAGAATaGAGACCAAAGTGTGGACAC +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNETQEE*RPKCGH
Trigger: GTGTCCACACTTTGGTCTTCATTCTTCTTGAGTTTC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATCCTCTGGATGAAAAATaGGCTCCAATCTTTCTTGCA +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNPLDEK*APIFLA
Trigger: TGCAAGAAAGATTGGAGCTCATTTTTCATCCAGAGG...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAAGTTCCTCAGAAAATTTaGCATAGTACTACCTTAGGA +
Preference number: 2 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKVPQKI*HSTTLG
Trigger: TCCTAAGGTAGTACTATGTCAAATTTTCTGAGGAAC...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATAGGGAATACCACAAATaGGAAGGGTCAGATAGTTGT +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNREYHK*EGSDSC
Trigger: ACAACTATCTGACCCTTCTCATTTGTGGTATTCCCT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAAGCAAGAATCTTTCCTTaGTTAATAAGGGCACAGATT +
Preference number: 2 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKARIFP*LIRAQI
Trigger: AATCTGTGCCCTTATTAAGCAAGGAAAGATTCTTGC...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTTCCATATTGTCCAAATaGCTCTTACTTGTCAAGCTA +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPSILSK*LLLVKL
Trigger: TAGCTTGACAAGTAAGAGGCATTTGGACAATATGGA...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTAAATTCACAGGCAAATaGCTGGAACGTGAAAATATC +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPKFTGK*LERENI
Trigger: GATATTTTCACGTTCCAGCCATTTGCCTGTGAATTT...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATCTAGCAAGATTTTGCTaGAAGTACCCAGATATAGCT +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNLARFC*KYPDIA
Trigger: AGCTATATCTGGGTACTTTCAGCAAAATCTTGCTAG...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGTAACAATGACTTTGTaGAATTCACAGGCAAATGGC +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNVTMTL*NSQANG
Trigger: GCCATTTGCCTGTGAATTTCACAAAGTCATTGTTAC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR TCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATATTGTATTGGTACAGTaGAAGGCAGGTAGATCAATG +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNIVLVQ*KAGRSM
Trigger: CATTGATCTACCTGCCTTTCACTGTACCAATACAAT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATAACATCAGTGGCTTATaGTCCAAGAACAACACTTTC +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNNISGL*SKNNTF
Trigger: GAAAGTGTTGTTCTTGGAGCATAAGCCACTGATGTT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATCACACCAGTCAAGAATaGCTAAGATCAAATAGTCAG +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNHTSQE*LRSNSQ
Trigger: CTGACTATTTGATCTTAGCCATTCTTGACTGGTGTG...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAATGGATAAAGAAAATATaGGACATTTGCACAATGGGA +
Preference number: 2 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKWIKKI*DICTMG
Trigger: TCCCATTGTGCAAATGTCCCATATTTTCTTTATCCA...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTACAACACTTTCCAAATaGGATCTCATAAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: IALKRVFNFPSEISQDRPTTLSK*DLIKLQ
Trigger: TTGCAGTTTTATGAGATCCCATTTGGAAAGTGTTGT...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATAAAAGCTGGATGAGATaGACAATTTTCGAGACAGAC +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNKSWMR*TIFETD
Trigger: GTCTGTCTCGAAAATTGTCCATCTCATCCAGCTTTT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR GCA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGTAAAGCAAAGGTTTTaGTTTAGTACTTCTGGTATC +
Preference number: 2 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNVKQRF*FSTSGI
Trigger: GATACCAGAAGTACTAAAGCAAAACCTTTGCTTTAC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp CCTGCTATCTCTGGCCTCCGTGAGGCCCAGAGACCTTaGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: PAISGLREAQRP*TASYPPPGGLG
Trigger: CCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCCAAGGTCTCTGGGCCTCACGGAGGCCAGAGATAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCTGCTGCTGCTGCTCTaGGTGGTCATCTCATGGTAC +
Preference number: 3 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTALLLLL*VVISWY
Trigger: GTACCATGAGATGACCACCAAGAGCAGCAGCAGCAG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp ACAGCCAGATACCCACCTGGGGCTGCATGGAAAGCGTaGGGCAGTCCTCCATGTTCACCTGCCCAGAGGACC +
Preference number: 3 (lower is better)
Translates to: TARYPPGAAWKA*GSPPCSPAQRT
Trigger: GGTCCTCTGGGCAGGTGAACATGGAGGACTGCCTCACGCTTTCCATGCAGCCCCAGGTGGGTATCTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp CCCAGTGTAGGGGGATGCCAGGGATGGAAGAGGGAGTaGATGGCTGAGTGGGAGAGCTGCCTCAGAGTCATG +
Preference number: 3 (lower is better)
Translates to: PSVGGCQGWKRE*MAEWESCLRVM
Trigger: CATGACTCTGAGGCAGCTCTCCCACTCAGCCATCCACTCCCTCTTCCATCCCTGGCATCCCCCTACACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GACCTTGGACTGCTTCTTATCCACCCCCTGGTGGGCTaGGGTCCATGGCTTCCCACAGCCAGATACCCACCT +
Preference number: 3 (lower is better)
Translates to: DLGLLLIHPLVG*GPWLPTARYPP
Trigger: AGGTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCCAAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGACTGCTGCTGCTGCTCTaGGTGGTCATCTCATGGTAC +
Preference number: 3 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGLLLLL*VVISWY
Trigger: GTACCATGAGATGACCACCAAGAGCAGCAGCAGCAG...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp TCCATGGCTTCCCACAGCCAGATACCCACCTGGGGCTaGATGGAAAGCGTGAGGCAGTCCTCCATGTTCACC +
Preference number: 3 (lower is better)
Translates to: SMASHSQIPTWG*MESVRQSSMFT
Trigger: GGTGAACATGGAGGACTGCCTCACGCTTTCCATGCAGCCCCAGGTGGGTATCTGGCTGTGGGAAGCCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp CGAAGGACTCTCACCCATGTGGGAAACACCCAGCACTaGTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTA +
Preference number: 3 (lower is better)
Translates to: RRTLTHVGNTQH*FSSCPLLPLAL
Trigger: TAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGGGTGTTTCCCACATGGGTGAGAGTCCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GGCTGTGGTCACATATGTGGCAGTGGATGGCCCTGTTaGACATCAGTGGGAGGAGAGGACCTTGGGCCTGAG +
Preference number: 3 (lower is better)
Translates to: GCGHICGSGWPC*TSVGGEDLGPE
Trigger: CTCAGGCCCAAGGTCCTCTCCTCCCACTGATGTCCAACAGGGCCATCCACTGCCACATATGTGACCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACATGTTCCTTACTGGTTaGCTTCCCCTGGCTTGCTCA +
Preference number: 3 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHMFLTG*LPLACS
Trigger: TGAGCAAGCCAGGGGAAGCAAACCAGTAAGGAACAT...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp TGCCCCAGACTGAGAACCTGCTATCTCTGGCCTCCGTaGGGCCCAGAGACCTTGGACTGCTTCTTATCCACC +
Preference number: 3 (lower is better)
Translates to: CPRLRTCYLWPP*GPETLDCFLST
Trigger: GGTGGATAAGAAGCAGTCCAAGGTCTCTGGGCCTCACGGAGGCCAGAGATAGCAGGTTCTCAGTCTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GGACTGAAGGACCTGAGGGGCTTTGCAGCACCATGGTaGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGA +
Preference number: 3 (lower is better)
Translates to: GLKDLRGFAAPW*EQQYQEARTPG
Trigger: TCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAAAGCCCCTCAGGTCCTTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GAGCTGATGCAGAGGCCGTGGAGGGATGTTCCTTACTaGTTTGCTTCCCCTGGCTTGCTCAGCCTGCTCTGT +
Preference number: 3 (lower is better)
Translates to: ELMQRPWRDVPY*FASPGLLSLLC
Trigger: ACAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAACCAGTAAGGAACATCCCTCCACGGCCTCTGCATCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGATCTTGTCAGTTCTTTTaGAGGCAGCAGAGGGTGAAG +
Preference number: 3 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGSCQFF*RQQRVK
Trigger: CTTCACCCTCTGCTGCCTCAAAAAGAACTGACAAGA...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCGCAGGGAGTTCTTTCTaGTCAGTTCTTTTTGAGGCA +
Preference number: 3 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAAGSSF*SVLFEA
Trigger: TGCCTCAAAAAGAACTGACAAGAAAGAACTCCCTGC...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GAGACCCATGGCTGTGGTCACATATGTGGCAGTGGATaGCCCTGTTGGACATCAGTGGGAGGAGAGGACCTT +
Preference number: 3 (lower is better)
Translates to: ETHGCGHICGSG*PCWTSVGGEDL
Trigger: AAGGTCCTCTCCTCCCACTGATGTCCAACAGGGCCATCCACTGCCACATATGTGACCACAGCCATGGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp AAGGGACTGAAGGACCTGAGGGGCTTTGCAGCACCATaGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCA +
Preference number: 3 (lower is better)
Translates to: KGLKDLRGFAAP*WEQQYQEARTP
Trigger: TGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAAAGCCCCTCAGGTCCTTCAGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GGCTGTCAATTGCAACTGAGGCTGCACCTTCACCAATaGCCTTCCATGGCCTCTCAGAGTGCCTCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: GCQLQLRLHLHQ*PSMASQSASAA
Trigger: AGCAGCTGAGGCACTCTGAGAGGCCATGGAAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGACAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp TCTAGTCATGGACCAGACGAAGGACTCTCACCCATGTaGGAAACACCCAGCACTGCTTCTCCAGCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: SSHGPDEGLSPM*ETPSTASPAAL
Trigger: GAGGGCAGCTGGAGAAGCAGTGCTGGGTGTTTCCCACATGGGTGAGAGTCCTTCGTCTGGTCCATGACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAGCAGGGAGTTCTTTCTaGTCAGTTCTTTTTGAGGCA +
Preference number: 3 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGAGSSF*SVLFEA
Trigger: TGCCTCAAAAAGAACTGACAAGAAAGAACTCCCTGC...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp TTCCATGGCCTCTCAGAGTGCCTCAGCTGCTCTGTGTaGCCCCTTCATGCCTTCAAAACCAGTACCACCTGG +
Preference number: 3 (lower is better)
Translates to: FHGLSECLSCSV*PLHAFKTSTTW
Trigger: CCAGGTGGTACTGGTTTTGAAGGCATGAAGGGGTCACACAGAGCAGCTGAGGCACTCTGAGAGGCCATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp GAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGTTGGATCACAGGGCCC +
Preference number: 3 (lower is better)
Translates to: ETMPGPSKHRSG*SQSAIGWITGP
Trigger: GGGCCCTGTGATCCAACCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAGGAAAGAGAGGCCCATaGGAGTTGCAAACTTTATAT +
Preference number: 3 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGGKRGP*ELQTLY
Trigger: ATATAAAGTTTGCAACTCCAATGGGCCTCTCTTTCC...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACCTGTTAGTTTTTAGCTaGTCCCATTATGGCTCCCAA +
Preference number: 3 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHLLVFS*SHYGSQ
Trigger: TTGGGAGCCATAATGGGACAAGCTAAAAACTAACAG...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGAGGAACACTCCTCCATaGTTGGTGGGATTGCAAGCT +
Preference number: 3 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWRNTPP*LVGLQA
Trigger: AGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCT...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCGAAAATGCCTTACAGTaGGATCTCATGGAGGTATTT +
Preference number: 3 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAENALQ*DLMEVF
Trigger: AAATACCTCCATGAGATCCAACTGTAAGGCATTTTC...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGGTCCTTGATTTCATaGCACAAGATACTTGACAAG +
Preference number: 3 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTARSLIS*HKILDK
Trigger: CTTGTCAAGTATCTTGTGCAATGAAATCAAGGACCT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp GGAGATAGAAAAGGGACTGAAGGACCTGAGGGGCTTTaGAGCACCATGGTGGGAGCAACAGTATCAAGAGGC +
Preference number: 3 (lower is better)
Translates to: GDRKGTEGPEGL*STMVGATVSRG
Trigger: GCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAAAGCCCCTCAGGTCCTTCAGTCCCTTTTCTATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp TCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTaGTCTTGGTGGTCATCTCATGGTACTGGCATCTCC +
Preference number: 3 (lower is better)
Translates to: SRLQMPVLHCCC*SWWSSHGTGIS
Trigger: GGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp TCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTaGTGCTCTTGGTGGTCATCTCATGGTACTGGCATC +
Preference number: 3 (lower is better)
Translates to: SSRLQMPVLHCC*CSWWSSHGTGI
Trigger: GATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCTACACTAGCAAGATTTaGCTGAAAGTACCCAGATAT +
Preference number: 3 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAYTSKI*LKVPRY
Trigger: ATATCTGGGTACTTTCAGCAAAATCTTGCTAGTGTA...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAGGTCTAATTATGCTATaGTACCTGACCTGCTTTCTA +
Preference number: 3 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGGLIML*YLTCFL
Trigger: TAGAAAGCAGGTCAGGTACAATAGCATAATTAGACC...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTTGGGAGGAGAGGACCTaGGGCCTGAGTTTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTWEERT*GLSLFD
Trigger: ATCAAACAAACTCAGGCCCAAGGTCCTCTCCTCCCA...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCGTGATAAAAACTGCATaGTATTGGTACAGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAVIKTA*YWYSER
Trigger: CCTTTCACTGTACCAATACAATGCAGTTTTTATCAC...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGTACTTCTGGTATCTaGTTAATCACAGCTGATTCT +
Preference number: 3 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTASTSGI*LITADS
Trigger: AGAATCAGCTGTGATTAACAAGATACCAGAAGTACT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTTTTGCTTCCCCTGGCTaGCTCAGCCTGCTCTGTTAT +
Preference number: 3 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTFASPG*LSLLCY
Trigger: ATAACAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAA...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCCAAATTCTAATCTTGTaGCTGGAAAAGAATCAGTGG +
Preference number: 3 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAQILIL*LEKNQW
Trigger: CCACTGATTCTTTTCCAGCAACAAGATTAGAATTTG...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGTAACTCTAGTGATTaGGTTCACATATCACCTTGT +
Preference number: 3 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTASNSSD*VHISPC
Trigger: ACAAGGTGATATGTGAACCAAATCACTAGAGTTACT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp CTCCATGTTCACCTGCCCAGAGGACCTAAACTCTGGTaGACTTGGGTTTTCTCCCACTCCCTTTATTCCCCC +
Preference number: 3 (lower is better)
Translates to: LHVHLPRGPKLW*TWVFSHSLYSP
Trigger: GGGGGAATAAAGGGAGTGGGAGAAAACCCAAGTTCACCAGAGTTTAGGTCCTCTGGGCAGGTGAACATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp CTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTaGTGGTCATCTCATGGTACTGGCATCTCCCAAACA +
Preference number: 3 (lower is better)
Translates to: LQMPVLHCCCCS*WSSHGTGISQT
Trigger: TGTTTGGGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp AACCATCCAATGTCTGGGATCCAACTAACGATCTTCTaGGCTCCTCCAAGGGCTTGGGTCATTTCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: NHPMSGIQLTIF*APPRAWVISPA
Trigger: GGCTGGAGAAATGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGTTAGTTGGATCCCAGACATTGGATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCTGCCCTCTCCTCCCTTaGGCCCTAGGGATGACGGAG +
Preference number: 3 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGCPLLP*ALGMTE
Trigger: CTCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCA...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp TTGCAGCACCATGGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGAGCTCGGAAAGAGAGGCCCATaGGAGTTGCAAACTTTATAT +
Preference number: 3 (lower is better)
Translates to: LQHHGGSNSIKRPEPQELGKRGP*ELQTLY
Trigger: ATATAAAGTTTGCAACTCCAATGGGCCTCTCTTTCC...GAGCTCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCATGGGAGGAGAGGACCTaGGGCCTGAGTTTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: LIWLTPERLCQSLTNTEAWEERT*GLSLFD
Trigger: ATCAAACAAACTCAGGCCCAAGGTCCTCTCCTCCCA...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp TGGAAAGAGAGGCCCATTGGAGTTGCAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAAAAGTG +
Preference number: 3 (lower is better)
Translates to: WKERPIGVANFI*PSTGERQGQKV
Trigger: CACTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAACTCCAATGGGCCTCTCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp AGTTGGCCATCACTGGAAAGAGAGGCCCATTGGAGTTaGAAACTTTATATGCCCCAGTACAGGGGAACGCCA +
Preference number: 3 (lower is better)
Translates to: SWPSLEREAHWS*KLYMPQYRGTP
Trigger: TGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAACTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp TCGGACAGAACAGTGAGCTATATTCCCAGAGACAGGTaGCTGACACCACAGAGCCCCCAACTCCATAATTCT +
Preference number: 3 (lower is better)
Translates to: SDRTVSYIPRDR*LTPQSPQLHNS
Trigger: AGAATTATGGAGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTTCTGTCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp TGGCCTAGTTGGCCATCACTGGAAAGAGAGGCCCATTaGAGTTGCAAACTTTATATGCCCCAGTACAGGGGA +
Preference number: 3 (lower is better)
Translates to: WPSWPSLEREAH*SCKLYMPQYRG
Trigger: TCCCCTGTACTGGGGCATATAAAGTTTGCAACTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGAGCTCCAATCTTTCTaGCATAGGGAAAGAAAAAGT +
Preference number: 3 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWELQSF*HRERKS
Trigger: ACTTTTTCTTTCCCTATGCAAGAAAGATTGGAGCTC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGTCCTCAGTCTTCCATaGGTCTTCAATAACAACAAA +
Preference number: 3 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWVLSLP*VFNNNK
Trigger: TTTGTTGTTATTGAAGACCAATGGAAGACTGAGGAC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp GTAGTAATGCACTCTCCTAGAGTAAGGAAAGAACCCTaGTGGGGGCCATCCTCAGCAGGGAGTTCTTTCTTG +
Preference number: 3 (lower is better)
Translates to: VVMHSPRVRKEP*WGPSSAGSSFL
Trigger: CAAGAAAGAACTCCCTGCTGAGGATGGCCCCCATCAGGGTTCTTTCCTTACTCTAGGAGAGTGCATTACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp TTCCTTACTGGTTTGCTTCCCCTGGCTTGCTCAGCCTaGTCTGTTATAGAACCAAGACTACCATCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: FLTGLLPLACSA*SVIEPRLPSQR
Trigger: TCTCTGGGATGGTAGTCTTGGTTCTATAACAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAACCAGTAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp ACATTACCAAGGCCCGCTGCAGAAGGAGTAGAACCTTaGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCA +
Preference number: 3 (lower is better)
Translates to: TLPRPAAEGVEP*LSLEHSLFVLS
Trigger: TGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACTCCTTCTGCAGCGGGCCTTGGTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp ATCCAACTAACGATCTTCTGGGCTCCTCCAAGGGCTTaGGTCATTTCTCCAGCCATTTCCTTTGTAGCACAC +
Preference number: 3 (lower is better)
Translates to: IQLTIFWAPPRA*VISPAISFVAH
Trigger: GTGTGCTACAAAGGAAATGGCTGGAGAAATGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGTTAGTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTCTGTTAGTTTTTAGCTaGTCCCATTATGGCTCCCAA +
Preference number: 3 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTLLVFS*SHYGSQ
Trigger: TTGGGAGCCATAATGGGACAAGCTAAAAACTAACAG...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp TTGCAGCACCATGGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGAGCTCAGAGACTTTTCCATATaGTCCAAATGCCTCTTACTT +
Preference number: 3 (lower is better)
Translates to: LQHHGGSNSIKRPEPQELRDFSI*SKCLLL
Trigger: AAGTAAGAGGCATTTGGACAATATGGAAAAGTCTCT...GAGCTCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGCGTGAAAATATCATCTaGAGTGAGGTAACTCACTTA +
Preference number: 3 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWRENII*SEVTHL
Trigger: TAAGTGAGTTACCTCACTCAAGATGATATTTTCACG...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp GAGGCTTTGTCAGAGCCTGACAAATACAGAGGCAGATaGATGCAGTCAACCATTGGATTGAGCATAAGGTCC +
Preference number: 3 (lower is better)
Translates to: EALSEPDKYRGR*MQSTIGLSIRS
Trigger: GGACCTTATGCTCAATCCAATGGTTGACTGCATGCATCTGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp CCATATACAGCCACCAAACCCAGATGCTATTGTGGATaGAGGGAAGTGCTTGCTCATAGAAGCCTGATATGG +
Preference number: 3 (lower is better)
Translates to: PYTATKPRCYCG*REVLAHRSLIW
Trigger: CCATATCAGGCTTCTATGAGCAAGCACTTCCCTGCATCCACAATAGCATCTGGGTTTGGTGGCTGTATATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp GAAGGATCCATCCCATATACAGCCACCAAACCCAGATaGTATTGTGGATGCAGGGAAGTGCTTGCTCATAGA +
Preference number: 3 (lower is better)
Translates to: EGSIPYTATKPR*YCGCREVLAHR
Trigger: TCTATGAGCAAGCACTTCCCTGCATCCACAATAGCATCTGGGTTTGGTGGCTGTATATGGGATGGATCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GACTCTAGCTGCAAATGTATCAAAAGATGGCCTAGTTaGCCATCACTGGAAAGAGAGGCCCATTGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: DSSCKCIKRWPS*PSLEREAHWSC
Trigger: GCAACTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACATTTGCAGCTAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GGAGCTCTTGACTCTAGCTGCAAATGTATCAAAAGATaGCCTAGTTGGCCATCACTGGAAAGAGAGGCCCAT +
Preference number: 3 (lower is better)
Translates to: GALDSSCKCIKR*PSWPSLEREAH
Trigger: ATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACATTTGCAGCTAGAGTCAAGAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GAGGAACACTCCTTCATTGCTGATGGGATTGCAAGTTaGTACAACCACTCTGGAAATCTGTCTGGTGGTTCC +
Preference number: 3 (lower is better)
Translates to: EEHSFIADGIAS*YNHSGNLSGGS
Trigger: GGAACCACCAGACAGATTTCCAGAGTGGTTGTACCAACTTGCAATCCCATCAGCAATGAAGGAGTGTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTGAAAATGCCTTACAGTaGGATCTCATGGAGGTATTT +
Preference number: 3 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTENALQ*DLMEVF
Trigger: AAATACCTCCATGAGATCCAACTGTAAGGCATTTTC...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACGAGCTCCAATCTTTCTaGCATAGGGAAAGAAAAAGT +
Preference number: 3 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHELQSF*HRERKS
Trigger: ACTTTTTCTTTCCCTATGCAAGAAAGATTGGAGCTC...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp GGTCTAATTATGCTATTGTACCTGACCTGCTTTCTATaGTCCTCTGAGGCCAAAGACTGCAGTCTCAGGCAC +
Preference number: 3 (lower is better)
Translates to: GLIMLLYLTCFL*SSEAKDCSLRH
Trigger: GTGCCTGAGACTGCAGTCTTTGGCCTCAGAGGATCATAGAAAGCAGGTCAGGTACAATAGCATAATTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCAGGTCTAATTATGCTATaGTACCTGACCTGCTTTCTA +
Preference number: 3 (lower is better)
Translates to: LIWLTPERLCQSLTNTEAGLIML*YLTCFL
Trigger: TAGAAAGCAGGTCAGGTACAATAGCATAATTAGACC...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp GCCAAGATCAAAAACTCAGGAGACATCAGATGCTGGTaGGAATATGGAGAGAGAGGAACACTCCTTCATTGC +
Preference number: 3 (lower is better)
Translates to: AKIKNSGDIRCW*EYGERGTLLHC
Trigger: GCAATGAAGGAGTGTTCCTCTCTCTCCATATTCTCACCAGCATCTGATGTCTCCTGAGTTTTTGATCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp AGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTaGAAGCTGGTACAAACACTCTGGAAATCTAGCAGT +
Preference number: 3 (lower is better)
Translates to: RERGTLLHCWWD*KLVQTLWKSSS
Trigger: ACTGCTAGATTTCCAGAGTGTTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GGTTGTAGAGAAAGAGGAACACTCCTCCATTGTTGGTaGGATTGCAAGCTGGTACAAACACTCTGGAAATCT +
Preference number: 3 (lower is better)
Translates to: GCRERGTLLHCW*DCKLVQTLWKS
Trigger: AGATTTCCAGAGTGTTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCTACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCGCAGGGAGTTCTTTCTaGTCAGTTCTTTTTGAGGCA +
Preference number: 3 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGAGSSF*SVLFEA
Trigger: TGCCTCAAAAAGAACTGACAAGAAAGAACTCCCTGC...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GATGAAGCACTCACTGCAGGAAAAACTCACTCCCTCTaGATGAAAAATGAGCTCCAATCTTTCTTGCATAGG +
Preference number: 3 (lower is better)
Translates to: DEALTAGKTHSL*MKNELQSFLHR
Trigger: CCTATGCAAGAAAGATTGGAGCTCATTTTTCATCCAGAGGGAGTGAGTTTTTCCTGCAGTGAGTGCTTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTaGTACAAACACTCTGGAAATCTAGCAGTTACATTT +
Preference number: 3 (lower is better)
Translates to: EEHSSIVGGIAS*YKHSGNLAVTF
Trigger: AAATGTAACTGCTAGATTTCCAGAGTGTTTGTACCAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp ACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGTACCCAGATATAGCTGTCTCTTGTGAGACT +
Preference number: 3 (lower is better)
Translates to: TLTPLHTLARFC*KYPDIAVSCET
Trigger: AGTCTCACAAGAGACAGCTATATCTGGGTACTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp ACAAAACTAGCCAGTACAATTGACCCCTTGTCAACTTaGCACACAAACACATCACTAGTAAGCCTCAACCCT +
Preference number: 3 (lower is better)
Translates to: TKLASTIDPLST*HTNTSLVSLNP
Trigger: AGGGTTGAGGCTTACTAGTGATGTGTTTGTGTGTCAAGTTGACAAGGGGTCAATTGTACTGGCTAGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp GGATTAACTGCTAGAGACTTTTCCATATTGTCCAAATaGCTCTTACTTGTCAAGCTAGGGGGAAGTTTGGAG +
Preference number: 3 (lower is better)
Translates to: GLTARDFSILSK*LLLVKLGGSLE
Trigger: CTCCAAACTTCCCCCTAGCTTGACAAGTAAGAGGCATTTGGACAATATGGAAAAGTCTCTAGCAGTTAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GCAAATGTATCAAAAGATGGCCTAGTTGGCCATCACTaGAAAGAGAGGCCCATTGGAGTTGCAAACTTTATA +
Preference number: 3 (lower is better)
Translates to: ANVSKDGLVGHH*KERPIGVANFI
Trigger: TATAAAGTTTGCAACTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GACAGCGTTTTCAACAAACGGTGCTGGTTGAACTGGTaGTTAGTATGGAGAAGAATGCAAATTGATCCATTC +
Preference number: 3 (lower is better)
Translates to: DSVFNKRCWLNW*LVWRRMQIDPF
Trigger: GAATGGATCAATTTGCATTCTTCTCCATACTAACCACCAGTTCAACCAGCACCGTTTGTTGAAAACGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp TCAAAAGCAAAAATTAATCTCCAACCATCCAATGTCTaGGATCCAACTAACGATCTTCTGGGCTCCTCCAAG +
Preference number: 3 (lower is better)
Translates to: SKAKINLQPSNV*DPTNDLLGSSK
Trigger: CTTGGAGGAGCCCAGAAGATCGTTAGTTGGATCCCAGACATTGGATGGTTGGAGATTAATTTTTGCTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTTCTTGTCAGTTCTTTTaGAGGCAGCAGAGGGTGAAG +
Preference number: 3 (lower is better)
Translates to: IALKRVFNFPSEISQDRPSCQFF*RQQRVK
Trigger: CTTCACCCTCTGCTGCCTCAAAAAGAACTGACAAGA...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACGGAGAAGAATGCAAATaGATCCATTCTTATGACCCT +
Preference number: 3 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHGEECK*IHSYDP
Trigger: AGGGTCATAAGAATGGATCAATTTGCATTCTTCTCC...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCGGAGAAGAATGCAAATaGATCCATTCTTATGACCCT +
Preference number: 3 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGGEECK*IHSYDP
Trigger: AGGGTCATAAGAATGGATCAATTTGCATTCTTCTCC...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCAGGTCCTTGATTTCATaGCACAAGATACTTGACAAG +
Preference number: 3 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGRSLIS*HKILDK
Trigger: CTTGTCAAGTATCTTGTGCAATGAAATCAAGGACCT...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp AAGACCCAAAAATTAACCCACACACCTATGGTTGCTTaGTCTTTGATGAAGGAGCTAAAGAACGATCCAGTG +
Preference number: 3 (lower is better)
Translates to: KTQKLTHTPMVA*SLMKELKNDPV
Trigger: CACTGGATCGTTCTTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGGGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp GTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATaGCCAAGAAGAAGTTTGGGGAGGAAAGGGTTTATT +
Preference number: 3 (lower is better)
Translates to: VLVRVSIPAQTS*PRRSLGRKGFI
Trigger: AATAAACCCTTTCCTCCCCAAACTTCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp GATGCTTCAGTGCTTCTGAGAAGGATGAACAAAATATaGACAGGAGGAAATATGGAGAAAAAGTGTGGAGCA +
Preference number: 3 (lower is better)
Translates to: DASVLLRRMNKI*TGGNMEKKCGA
Trigger: TGCTCCACACTTTTTCTCCATATTTCCTCCTGTGCATATTTTGTTCATCCTTCTCAGAAGCACTGAAGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp CATATTACTGACTGTCTTAGTCAGGGTTTCTATTCCTaGACAAACATCATGACCAAGAAGAAGTTTGGGGAG +
Preference number: 3 (lower is better)
Translates to: HITDCLSQGFYS*TNIMTKKKFGE
Trigger: CTCCCCAAACTTCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAGTCAGTAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp AAAGACAGCGTTTTCAACAAACGGTGCTGGTTGAACTaGTGGTTAGTATGGAGAAGAATGCAAATTGATCCA +
Preference number: 3 (lower is better)
Translates to: KDSVFNKRCWLN*WLVWRRMQIDP
Trigger: TGGATCAATTTGCATTCTTCTCCATACTAACCACCAGTTCAACCAGCACCGTTTGTTGAAAACGCTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGTACACTAGCAAGATTTaGCTGAAAGTACCCAGATAT +
Preference number: 3 (lower is better)
Translates to: ELGTKHPWKELQRQSLELYTSKI*LKVPRY
Trigger: ATATCTGGGTACTTTCAGCAAAATCTTGCTAGTGTA...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACAGAGACTTTTCCATATaGTCCAAATGCCTCTTACTT +
Preference number: 3 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHRDFSI*SKCLLL
Trigger: AAGTAAGAGGCATTTGGACAATATGGAAAAGTCTCT...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATAGGAACACTCCTCCATaGTTGGTGGGATTGCAAGCT +
Preference number: 3 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNRNTPP*LVGLQA
Trigger: AGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCGTGATAAAAACTGCATaGTATTGGTACAGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGVIKTA*YWYSER
Trigger: CCTTTCACTGTACCAATACAATGCAGTTTTTATCAC...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCAGTAACTCTAGTGATTaGGTTCACATATCACCTTGT +
Preference number: 3 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGSNSSD*VHISPC
Trigger: ACAAGGTGATATGTGAACCAAATCACTAGAGTTACT...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp ACTCTGGAAATCTGTCTGGTGGTTCCTCAGAAAATTTaGCATAGTACTACCTTAGGACCCAACTATACCATT +
Preference number: 3 (lower is better)
Translates to: TLEICLVVPQKI*HSTTLGPNYTI
Trigger: AATGGTATAGTTGGGTCCTAAGGTAGTACTATGTCAAATTTTCTGAGGAACCACCAGACAGATTTCCAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp GTTGAACTGGTGGTTAGTATGGAGAAGAATGCAAATTaGTCCATTCTTATGACCCTGTACAAAGCTCAAGTC +
Preference number: 3 (lower is better)
Translates to: VELVVSMEKNAN*SILMTLYKAQV
Trigger: GACTTGAGCTTTGTACAGGGTCATAAGAATGGATCAATTTGCATTCTTCTCCATACTAACCACCAGTTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp TCAGTGGCTTATGCTCCAAGAACAACACTTTCCAAATaGGATCTCATAAAACTGCAAAGCTTCTGTAATGCA +
Preference number: 3 (lower is better)
Translates to: SVAYAPRTTLSK*DLIKLQSFCNA
Trigger: TGCATTACAGAAGCTTTGCAGTTTTATGAGATCCCATTTGGAAAGTGTTGTTCTTGGAGCATAAGCCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAAGAGCTCCAATCTTTCTaGCATAGGGAAAGAAAAAGT +
Preference number: 3 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKELQSF*HRERKS
Trigger: ACTTTTTCTTTCCCTATGCAAGAAAGATTGGAGCTC...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATAGGAACACTCCTTCATaGCTGATGGGATTGCAAGTT +
Preference number: 3 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNRNTPS*LMGLQV
Trigger: AACTTGCAATCCCATCAGCAATGAAGGAGTGTTCCT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTGTCCTCAGTCTTCCATaGGTCTTCAATAACAACAAA +
Preference number: 3 (lower is better)
Translates to: IALKRVFNFPSEISQDRPVLSLP*VFNNNK
Trigger: TTTGTTGTTATTGAAGACCAATGGAAGACTGAGGAC...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp TTAGTATGGAGAAGAATGCAAATTGATCCATTCTTATaGCCCTGTACAAAGCTCAAGTCCAACTGGATCAAG +
Preference number: 3 (lower is better)
Translates to: LVWRRMQIDPFL*PCTKLKSNWIK
Trigger: CTTGATCCAGTTGGACTTGAGCTTTGTACAGGGTCATAAGAATGGATCAATTTGCATTCTTCTCCATACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp AATGAAGCCCAAGAAGAAGGAAGAACAAATTGTGGATaGTTCAGTGCTTCTGAGAAGGATGAACAAAATATG +
Preference number: 3 (lower is better)
Translates to: NEAQEEGRTNCG*FSASEKDEQNM
Trigger: CATATTTTGTTCATCCTTCTCAGAAGCACTGAAGCATCCACAATTTGTTCTTCCTTCTTCTTGGGCTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp AAGGGAAAATTTAATGTGCAGAACATCAGTGGCTTATaGTCCAAGAACAACACTTTCCAAATGGGATCTCAT +
Preference number: 3 (lower is better)
Translates to: KGKFNVQNISGL*SKNNTFQMGSH
Trigger: ATGAGATCCCATTTGGAAAGTGTTGTTCTTGGAGCATAAGCCACTGATGTTCTGCACATTAAATTTTCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp ATTGTAACAAAGGTGTTAAAACCATCATGTGATGTATaGTGGCCATGTCATCTTGTCAGAAATAGTGCAGGA +
Preference number: 3 (lower is better)
Translates to: IVTKVLKPSCDV*WPCHLVRNSAG
Trigger: TCCTGCACTATTTCTGACAAGATGACATGGCCAGCATACATCACATGATGGTTTTAACACCTTTGTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp CATGCATACTCTTATGTATTTCTATTCAAGCCCAGTTaGGTCCAGATTGCATGGATTCTCACAATTACATAC +
Preference number: 3 (lower is better)
Translates to: HAYSYVFLFKPS*VQIAWILTITY
Trigger: GTATGTAATTGTGAGAATCCATGCAATCTGGACCCAACTGGGCTTGAATAGAAATACATAAGAGTATGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp GTAACAAAGGTGTTAAAACCATCATGTGATGTATGCTaGCCATGTCATCTTGTCAGAAATAGTGCAGGAATA +
Preference number: 3 (lower is better)
Translates to: VTKVLKPSCDVC*PCHLVRNSAGI
Trigger: TATTCCTGCACTATTTCTGACAAGATGACATGGCCAGCATACATCACATGATGGTTTTAACACCTTTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGGAAAGAGAGGCCCATaGGAGTTGCAAACTTTATAT +
Preference number: 3 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNGKRGP*ELQTLY
Trigger: ATATAAAGTTTGCAACTCCAATGGGCCTCTCTTTCC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp GCAACTAAAGAAATGTTTAACACCCTTAGTTATCAGTaGCATGCAAATCAAATAATGCTGAGATCCCACCTC +
Preference number: 3 (lower is better)
Translates to: ATKEMFNTLSYQ*HANQIMLRSHL
Trigger: GAGGTGGGATCTCAGCATTATTTGATTTGCATGTCACTGATAACTAAGGGTGTTAAACATTTCTTTAGTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp TTATGTATTTCTATTCAAGCCCAGTTGGGTCCAGATTaGATGGATTCTCACAATTACATACTTACACATCCA +
Preference number: 3 (lower is better)
Translates to: LCISIQAQLGPD*MDSHNYILTHP
Trigger: TGGATGTGTAAGTATGTAATTGTGAGAATCCATGCAATCTGGACCCAACTGGGCTTGAATAGAAATACATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp TGGATAAAGAAAATATGGGACATTTGCACAATGGGATaGCACTCAGCTATGAGTAACAATGACTTTGTGAAA +
Preference number: 3 (lower is better)
Translates to: WIKKIWDICTMG*HSAMSNNDFVK
Trigger: TTTCACAAAGTCATTGTTACTCATAGCTGAGTGGCATCCCATTGTGCAAATGTCCCATATTTTCTTTATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR GCA 72 bp TCAACAAAGGAATGGATAAAGAAAATATGGGACATTTaGACAATGGGATGCCACTCAGCTATGAGTAACAAT +
Preference number: 3 (lower is better)
Translates to: STKEWIKKIWDI*TMGCHSAMSNN
Trigger: ATTGTTACTCATAGCTGAGTGGCATCCCATTGTGCAAATGTCCCATATTTTCTTTATCCATTCCTTTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp ATGAGTAACAATGACTTTGTGAAATTCACAGGCAAATaGCTGGAACGTGAAAATATCATCTTGAGTGAGGTA +
Preference number: 3 (lower is better)
Translates to: MSNNDFVKFTGK*LERENIILSEV
Trigger: TACCTCACTCAAGATGATATTTTCACGTTCCAGCCATTTGCCTGTGAATTTCACAAAGTCATTGTTACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CCA 72 bp ATGTTCATAGTAGCCATATTTATAATATCCCAAAGCTaGAAGCAACCCAGATGTTCTTCAACAAAGGAATGG +
Preference number: 3 (lower is better)
Translates to: MFIVAIFIISQS*KQPRCSSTKEW
Trigger: CCATTCCTTTGTTGAAGAACATCTGGGTTGCTTCCAGCTTTGGGATATTATAAATATGGCTACTATGAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGGTCTAATTATGCTATaGTACCTGACCTGCTTTCTA +
Preference number: 3 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNGLIML*YLTCFL
Trigger: TAGAAAGCAGGTCAGGTACAATAGCATAATTAGACC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGTCCTCAGTCTTCCATaGGTCTTCAATAACAACAAA +
Preference number: 3 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNVLSLP*VFNNNK
Trigger: TTTGTTGTTATTGAAGACCAATGGAAGACTGAGGAC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATAGAGACTTTTCCATATaGTCCAAATGCCTCTTACTT +
Preference number: 3 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNRDFSI*SKCLLL
Trigger: AAGTAAGAGGCATTTGGACAATATGGAAAAGTCTCT...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATCGTGAAAATATCATCTaGAGTGAGGTAACTCACTTA +
Preference number: 3 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNRENII*SEVTHL
Trigger: TAAGTGAGTTACCTCACTCAAGATGATATTTTCACG...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR-3UTR CAA 90 bp ATTATCCTGTTTACCTTCTGTGTTCAGGCTGAATATTTTCTGAAGAGACAGAATGGGGTATTAGGTGGATaGAATAGTTTATTTAACAGG +
Preference number: 3 (lower is better)
Translates to: IILFTFCVQAEYFLKRQNGVLGG*NSLFNR
Trigger: CCTGTTAAATAAACTATTCAATCCACCTAATACCCC...ATTCTGTCTCTTCAGAAAATATTCAGCCTGAACACAGAAGGTAAACAGGATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR TCA 72 bp TCCTTGCTTAATAAGGGCACAGATTATATAATAATCTaGAGCAGACCCTTTCAAGATGATCACCTGTTAGTT +
Preference number: 3 (lower is better)
Translates to: SLLNKGTDYIII*SRPFQDDHLLV
Trigger: AACTAACAGGTGATCATCTTGAAAGGGTCTGCTTCAGATTATTATATAATCTGTGCCCTTATTAAGCAAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACGTGTGGAGGATGTGTTaGACCCTCTTTTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHVWRMC*TLFLCP
Trigger: TGGACACAAAAAGAGGGTTCAACACATCCTCCACAC...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCACGACTCATCACAAATaGGCCTATAGCAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTATTHHK*AYSRKT
Trigger: GGTTTTCCTGCTATAGGCCCATTTGTGATGAGTCGT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp GGACTGCTTCTTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAAAATGCTAGAAAGGTaGAAACCAGGATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: GLLLIHPLVGWGPWLPTAKMLER*KPGSEW
Trigger: CCATTCTGATCCTGGTTTGCACCTTTCTAGCATTTT...GGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAAGAAGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp GCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTaGGTGGTCATCTCATGGTACTGGCATCTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: APDACTSLLLLL*VVISWYWHLPN
Trigger: GTTTGGGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp GAAGGGTGTGGGACCCTGAGAGACAGCCTGTTTTCGTaGAATGAAGCTGGCTTTGGTGACTCAGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: EGCGTLRDSLFS*NEAGFGDSAET
Trigger: GGTCTCAGCTGAGTCACCAAAGCCAGCTTCATTCAACGAAAACAGGCTGTCTCTCAGGGTCCCACACCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp TTATCCACCCCCTGGTGGGCTGGGGTCCATGGCTTCCCACAGCCAGATACCCACTGCTGGAAGATACAATaGGCAAAGAAAACAGGACTT +
Preference number: 4 (lower is better)
Translates to: LSTPWWAGVHGFPQPDTHCWKIQ*AKKTGL
Trigger: AAGTCCTGTTTTCTTTGCTCATTGTATCTTCCAGCA...GTGGGTATCTGGCTGTGGGAAGCCATGGACCCCAGCCCACCAGGGGGTGGATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGTGTGGAGGATGTGTTaGACCCTCTTTTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWVWRMC*TLFLCP
Trigger: TGGACACAAAAAGAGGGTTCAACACATCCTCCACAC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAAAAATGCTAGAAAGGTaGAAACCAGGATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGKMLER*KPGSEW
Trigger: CCATTCTGATCCTGGTTTGCACCTTTCTAGCATTTT...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp CCTAGGGATGACGGAGCTGCCCTCAGGGACCCCATTTaGCTTTCAGCTCTTTCGAAGTGTCTAGTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: PRDDGAALRDPI*LSALSKCLVVS
Trigger: AGACACAACTAGACACTTCGAAAGAGCTGAAAGCAAAATGGGGTCCCTGAGGGCAGCTCCGTCATCCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGCATATTTACTAGCATaGATAGGATCCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWAYLLA*IGSSRE
Trigger: CTCTCTGCTGGATCCTATTCATGCTAGTAAATATGC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp TTGCAGCACCATGGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGAGCTCATTCCATCCAAAAACTaGAAGTACCTCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LQHHGGSNSIKRPEPQELIPSKN*KYLWKS
Trigger: GGACTTCCAGAGGTACTTGCAGTTTTTGGATGGAAT...GAGCTCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp CACATTACCAAGGCCCGCTGCAGAAGGAGTAGAACCTaGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: HITKARCRRSRT*AISGTQPLCAF
Trigger: GAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACTCCTTCTGCAGCGGGCCTTGGTAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp TGGAGGGATGTTCCTTACTGGTTTGCTTCCCCTGGCTaGCTCAGCCTGCTCTGTTATAGAACCAAGACTACC +
Preference number: 4 (lower is better)
Translates to: WRDVPYWFASPG*LSLLCYRTKTT
Trigger: GGTAGTCTTGGTTCTATAACAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAACCAGTAAGGAACATCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGTGCTGGAAGATACAATaGGCAAAGAAAACAGGACTT +
Preference number: 4 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWCWKIQ*AKKTGL
Trigger: AAGTCCTGTTTTCTTTGCTCATTGTATCTTCCAGCA...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CCA 90 bp TTGCAGCACCATGGTGGGAGCAACAGTATCAAGAGGCCAGAACCCCAGGAGCTCAACTGCAAGTACCTCTaGAAGTCCTTTGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: LQHHGGSNSIKRPEPQELNCKYL*KSFGEN
Trigger: ATTTTCTCCAAAGGACTTCCAGAGGTACTTGCAGTT...GAGCTCCTGGGGTTCTGGCCTCTTGATACTGTTGCTCCCACCATGGTGCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp GATCCAACTAACGATCTTCTGGGCTCCTCCAAGGGCTaGGGTCATTTCTCCAGCCATTTCCTTTGTAGCACA +
Preference number: 4 (lower is better)
Translates to: DPTNDLLGSSKG*GHFSSHFLCST
Trigger: TGTGCTACAAAGGAAATGGCTGGAGAAATGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGTTAGTTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTGCATATTTACTAGCATaGATAGGATCCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTAYLLA*IGSSRE
Trigger: CTCTCTGCTGGATCCTATTCATGCTAGTAAATATGC...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGGCTATTTCTGTTGGTTaGTGTATATACAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWAISVG*CIYREK
Trigger: CTTTTCCCTGTATATACATCAACCAACAGAAATAGC...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CCA 90 bp AACAGTGAGCTATATTCCCAGAGACAGGTGCCTGACACCACAGAGCCCCCAACTAACTGCAAGTACCTCTaGAAGTCCTTTGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NSELYSQRQVPDTTEPPTNCKYL*KSFGEN
Trigger: ATTTTCTCCAAAGGACTTCCAGAGGTACTTGCAGTT...AGTTGGGGGCTCTGTGGTGTCAGGCACCTGTCTCTGGGAATATAGCTCACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACCAGGCCCATGAACTTTaGTGTTTGCTCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHQAHEL*CLLFKF
Trigger: GAATTTAAAGAGCAAACAGCAAAGTTCATGGGCCTG...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CCA 90 bp AAACACTGCATGACCCCTTTAGTCCTGGGCTGTCAATTGCAACTGAGGCTGCACAACTGCAAGTACCTCTaGAAGTCCTTTGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: KHCMTPLVLGCQLQLRLHNCKYL*KSFGEN
Trigger: ATTTTCTCCAAAGGACTTCCAGAGGTACTTGCAGTT...GTGCAGCCTCAGTTGCAATTGACAGCCCAGGACTAAAGGGGTCATGCAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp TGGAGAGAGAGGAACACTCCTTCATTGCTGATGGGATaGCAAGTTGGTACAACCACTCTGGAAATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: WRERNTPSLLMG*QVGTTTLEICL
Trigger: CAGACAGATTTCCAGAGTGGTTGTACCAACTTGCAATCCCATCAGCAATGAAGGAGTGTTCCTCTCTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp CTGGTGAGAATATGGAGAGAGAGGAACACTCCTTCATaGCTGATGGGATTGCAAGTTGGTACAACCACTCTG +
Preference number: 4 (lower is better)
Translates to: LVRIWRERNTPS*LMGLQVGTTTL
Trigger: CAGAGTGGTTGTACCAACTTGCAATCCCATCAGCAATGAAGGAGTGTTCCTCTCTCTCCATATTCTCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp CTGATATGGCTGACTCCTGAGAGGCTTTGTCAGAGCCTGACAAATACAGAGGCAGCTATTTCTGTTGGTTaGTGTATATACAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LIWLTPERLCQSLTNTEAAISVG*CIYREK
Trigger: CTTTTCCCTGTATATACATCAACCAACAGAAATAGC...TGCCTCTGTATTTGTCAGGCTCTGACAAAGCCTCTCAGGAGTCAGCCATATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGGAGTACAATTCCCATTaGCAGGTTCCCAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: ELGTKHPWKELQRQSLELEYNSH*QVPKIH
Trigger: ATGGATTTTGGGAACCTGGCAATGGGAATTGTACTC...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCGAGTACAATTCCCATTaGCAGGTTCCCAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGEYNSH*QVPKIH
Trigger: ATGGATTTTGGGAACCTGGCAATGGGAATTGTACTC...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGATTCCATCCAAAAACTaGAAGTACCTCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ELGTKHPWKELQRQSLELIPSKN*KYLWKS
Trigger: GGACTTCCAGAGGTACTTGCAGTTTTTGGATGGAAT...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CCA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAAACCAGGATCAGAATaGTCTGTGTGGCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: ELGTKHPWKELQRQSLELKPGSE*SVWLCF
Trigger: AAAACAGAGCCACACAGACCATTCTGATCCTGGTTT...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp GAACAACATTATGAACTAACCAGTACCCCGGAGCTCTaGACTCTAGCTGCAAATGTATCAAAAGATGGCCTA +
Preference number: 4 (lower is better)
Translates to: EQHYELTSTPEL*TLAANVSKDGL
Trigger: TAGGCCATCTTTTGATACATTTGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp TTCACAGGCAAATGGCTGGAACGTGAAAATATCATCTaGAGTGAGGTAACTCACTTACAAGAGGACACACAC +
Preference number: 4 (lower is better)
Translates to: FTGKWLERENII*SEVTHLQEDTH
Trigger: GTGTGTGTCCTCTTGTAAGTGAGTTACCTCACTCAAGATGATATTTTCACGTTCCAGCCATTTGCCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGTGCTGGAAGATACAATaGGCAAAGAAAACAGGACTT +
Preference number: 4 (lower is better)
Translates to: ELGTKHPWKELQRQSLELCWKIQ*AKKTGL
Trigger: AAGTCCTGTTTTCTTTGCTCATTGTATCTTCCAGCA...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTGTGTGGAGGATGTGTTaGACCCTCTTTTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IALKRVFNFPSEISQDRPVWRMC*TLFLCP
Trigger: TGGACACAAAAAGAGGGTTCAACACATCCTCCACAC...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp GAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGCAGGCCCATGAACTTTaGTGTTTGCTCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: ELGTKHPWKELQRQSLELQAHEL*CLLFKF
Trigger: GAATTTAAAGAGCAAACAGCAAAGTTCATGGGCCTG...CAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp AGTAGAACCTTGGCTATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACACAAAATGCTAGAAAGGTaGAAACCAGGATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: SRTLAISGTQPLCAFRKHKMLER*KPGSEW
Trigger: CCATTCTGATCCTGGTTTGCACCTTTCTAGCATTTT...GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATAGCCAAGGTTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CCA 90 bp AGACCCTTTCAAGATGATCACCTGTTAGTTTTTAGCTTGTCCCATTATGGCTCCAAACCAGGATCAGAATaGTCTGTGTGGCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RPFQDDHLLVFSLSHYGSKPGSE*SVWLCF
Trigger: AAAACAGAGCCACACAGACCATTCTGATCCTGGTTT...GGAGCCATAATGGGACAAGCTAAAAACTAACAGGTGATCATCTTGAAAGGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp GAGATTAGAGGATTAACTGCTAGAGACTTTTCCATATaGTCCAAATGCCTCTTACTTGTCAAGCTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: EIRGLTARDFSI*SKCLLLVKLGG
Trigger: TCCCCCTAGCTTGACAAGTAAGAGGCATTTGGACAATATGGAAAAGTCTCTAGCAGTTAATCCTCTAATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAAACGACTCATCACAAATaGGCCTATAGCAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKTTHHK*AYSRKT
Trigger: GGTTTTCCTGCTATAGGCCCATTTGTGATGAGTCGT...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTGAGTACAATTCCCATTaGCAGGTTCCCAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: IALKRVFNFPSEISQDRPEYNSH*QVPKIH
Trigger: ATGGATTTTGGGAACCTGGCAATGGGAATTGTACTC...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp AGACCCTTTCAAGATGATCACCTGTTAGTTTTTAGCTaGTCCCATTATGGCTCCCAACAGAACCCAATTATA +
Preference number: 4 (lower is better)
Translates to: RPFQDDHLLVFS*SHYGSQQNPII
Trigger: TATAATTGGGTTCTGTTGGGAGCCATAATGGGACAAGCTAAAAACTAACAGGTGATCATCTTGAAAGGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp AAAGACCCAAAAATTAACCCACACACCTATGGTTGCTaGATCTTTGATGAAGGAGCTAAAGAACGATCCAGT +
Preference number: 4 (lower is better)
Translates to: KDPKINPHTYGC*IFDEGAKERSS
Trigger: ACTGGATCGTTCTTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGGGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp GTAAAGCAAAGGTTTTGCTTTAGTACTTCTGGTATCTaGTTAATCACAGCTGATTCTTCAGCCCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: VKQRFCFSTSGI*LITADSSAPGN
Trigger: GTTACCTGGGGCTGAAGAATCAGCTGTGATTAACAAGATACCAGAAGTACTAAAGCAAAACCTTTGCTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR GCA 90 bp CCAAAAATTAACCCACACACCTATGGTTGCTTGATCTTTGATGAAGGAGCTAAACAGGCCCATGAACTTTaGTGTTTGCTCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: PKINPHTYGCLIFDEGAKQAHEL*CLLFKF
Trigger: GAATTTAAAGAGCAAACAGCAAAGTTCATGGGCCTG...TTTAGCTCCTTCATCAAAGATCAAGCAACCATAGGTGTGTGGGTTAATTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR TCA 90 bp ATAGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACAAGACAGGCCTGCTATTTCTGTTGGTTaGTGTATATACAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: IALKRVFNFPSEISQDRPAISVG*CIYREK
Trigger: CTTTTCCCTGTATATACATCAACCAACAGAAATAGC...AGGCCTGTCTTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
3UTR CAA 72 bp CACTCCCTCTGGATGAAAAATGAGCTCCAATCTTTCTaGCATAGGGAAAGAAAAAGTGATTGTTATATATGT +
Preference number: 4 (lower is better)
Translates to: HSLWMKNELQSF*HRERKSDCYIC
Trigger: ACATATATAACAATCACTTTTTCTTTCCCTATGCAAGAAAGATTGGAGCTCATTTTTCATCCAGAGGGAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CAA 90 bp CCAGCACTGCTTCTCCAGCTGCCCTCTCCTCCCTTTGGCCCTAGGGATGACGGAACCTCTGGAAGTCCTTaGGAGAAAATAATCAAGGAG +
Preference number: 5 (lower is better)
Translates to: PALLLQLPSPPFGPRDDGTSGSP*EKIIKE
Trigger: CTCCTTGATTATTTTCTCCAAAGGACTTCCAGAGGT...TCCGTCATCCCTAGGGCCAAAGGGAGGAGAGGGCAGCTGGAGAAGCAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CAA 90 bp GCATCGTCCTCTAGGCTCCAGATGCCTGTACTTCACTGCTGCTGCTGCTCTTGGCATGAACTTTGCTGTTaGCTCTTTAAATTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: ASSSRLQMPVLHCCCCSWHELCC*LFKFLP
Trigger: TGGAAGGAATTTAAAGAGCAAACAGCAAAGTTCATG...CCAAGAGCAGCAGCAGCAGTGAAGTACAGGCATCTGGAGCCTAGAGGACGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CAA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCACCTCTGGAAGTCCTTaGGAGAAAATAATCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGTSGSP*EKIIKE
Trigger: CTCCTTGATTATTTTCTCCAAAGGACTTCCAGAGGT...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CAA 90 bp CTGACTATCTACAATAAAGCTCTAAAACCACAGGCTGTCTCTGCTCATCAAGGCCATGAACTTTGCTGTTaGCTCTTTAAATTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: LTIYNKALKPQAVSAHQGHELCC*LFKFLP
Trigger: TGGAAGGAATTTAAAGAGCAAACAGCAAAGTTCATG...GCCTTGATGAGCAGAGACAGCCTGTGGTTTTAGAGCTTTATTGTAGATAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS-3UTR CAA 90 bp TTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGACCTCTGGAAGTCCTTaGGAGAAAATAATCAAGGAG +
Preference number: 5 (lower is better)
Translates to: FLELGTKHPWKELQRQSLTSGSP*EKIIKE
Trigger: CTCCTTGATTATTTTCTCCAAAGGACTTCCAGAGGT...CAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS TCA 72 bp AGAAGAGAGAAGTTTCCCAGAATACCAAGTGCACTCTaGAGTGAGAGTACAATTCCCATTGCCAGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: RREKFPRIPSAL*SESTIPIARFP
Trigger: TGGGAACCTGGCAATGGGAATTGTACTCTCACTTCAGAGTGCACTTGGTATTCTGGGAAACTTCTCTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000076759.3
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS CAA 72 bp GCAGAGAGAAATGAACAGGCCCATGAACTTTGCTGTTaGCTCTTTAAATTCCTTCCAGCAGGAGTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: AERNEQAHELCC*LFKFLPAGVPG
Trigger: ACCAGGAACTCCTGCTGGAAGGAATTTAAAGAGCAAACAGCAAAGTTCATGGGCCTGTTCATTTCTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000076759.3
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS GCA 72 bp GATCCAGCAGAGAGAAATGAACAGGCCCATGAACTTTaGTGTTTGCTCTTTAAATTCCTTCCAGCAGGAGTT +
Preference number: 6 (lower is better)
Translates to: DPAERNEQAHEL*CLLFKFLPAGV
Trigger: AACTCCTGCTGGAAGGAATTTAAAGAGCAAACAGCAAAGTTCATGGGCCTGTTCATTTCTCTCTGCTGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000076759.3
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2
CDS CAA 72 bp AGAGGTCCTAGGGGAAGCATGAGTGTGGAGGATGTGTaGAACCCTCTTTTTGTGTCCATAAAGTATGACTAT +
Preference number: 6 (lower is better)
Translates to: RGPRGSMSVEDV*NPLFVSIKYDY
Trigger: ATAGTCATACTTTATGGACACAAAAAGAGGGTTCAACACATCCTCCACACTCATGCTTCCCCTAGGACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000076759.3
ENSMUST00000232810.2
ENSMUST00000232852.2
ENSMUST00000233712.2