Pregenerated sensors for VMN1R227 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067951Ensembl transcript IDs: ENSMUST00000179914.3, ENSMUST00000232943.2, ENSMUST00000233597.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGGCATATACAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LGHIQFACPMGLSFQ*WPTRPSFDTYAARV Trigger: GACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTGTATATGCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR TCA 90 bp | TATCATGTCTACAAGAAATGCAGGGATGTGGTATGGAGCAGAGAATaGGAGAATAGCCAGTCAATAATTGGCCCAACCCACCGAAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: YHVYKKCRDVVWSRE*ENSQSIIGPTHRRG Trigger: GCCCCTTCGGTGGGTTGGGCCAATTATTGACTGGCTATTCTCTCATTCTCTGCTCCATACCACATCCCTGCATTTCTTGTAGACATGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR TCA 90 bp | GATTTTCAAGGCCATATAGCCATTTCTCCTGTCCTTCCAATTAGCTaGTCCCAAACTCTTCATTCTCCTTCCTATGCCCCCTCTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: DFQGHIAISPVLPIS*SQTLHSPSYAPSLP Trigger: TGGAAGAGAGGGGGCATAGGAAGGAGAATGAAGAGTTTGGGATCAGCTAATTGGAAGGACAGGAGAAATGGCTATATGGCCTTGAAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR CCA 90 bp | TTATCTATTCTCACTGGAAGTGGCTATCTTTGTAGAGATTTGAAGTaGCATGGTAGGGGGATACAAAGGGAGGCCCCACCTTCTATGAAG | + |
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Preference number: 1 (lower is better) Translates to: LSILTGSGYLCRDLK*HGRGIQREAPPSMK Trigger: CTTCATAGAAGGTGGGGCCTCCCTTTGTATCCCCCTACCATGCCACTTCAAATCTCTACAAAGATAGCCACTTCCAGTGAGAATAGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR TCA 90 bp | ATTGCACTCCAAAGTGGTTGTACAAGATTGTACTTCCACTGGAAATaGAGAATTGTTCCCCTCAATCCACACCCTCAACAGAATGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: IALQSGCTRLYFHWK*RIVPLNPHPQQNVL Trigger: CAGCACATTCTGTTGAGGGTGTGGATTGAGGGGAACAATTCTTCATTTCCAGTGGAAGTACAATCTTGTACAACCACTTTGGAGTGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR CAA 90 bp | TCAATAATTGGCCCAACCCACCGAAGGGGCAAGCACCAATCCCTGTaGTCCTCTGAGAAGCTCCACCCAGCAACATACTTAGACAGATAT | + |
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Preference number: 2 (lower is better) Translates to: SIIGPTHRRGKHQSL*SSEKLHPATYLDRY Trigger: ATATCTGTCTAAGTATGTTGCTGGGTGGAGCTTCTCAGAGGACAACAGGGATTGGTGCTTGCCCCTTCGGTGGGTTGGGCCAATTATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCATCCCTGTTGTCCTCTaGGAAGCTCCACCCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPIPVVL*EAPPSN Trigger: GTTGCTGGGTGGAGCTTCTCAGAGGACAACAGGGAT...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCGTAGGAGAGAGTGACTaGAAGGGAAGCAGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPVGESD*KGSSEW Trigger: CCACTCACTGCTTCCCTTTCAGTCACTCTCTCCTAC...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGGTAGGAGAGAGTGACTaGAAGGGAAGCAGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: ESRALGYWLVHNVVPPIGVGESD*KGSSEW Trigger: CCACTCACTGCTTCCCTTTCAGTCACTCTCTCCTAC...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGGAATATGTTCTTCTGGCTGGGCTCCCTTATCTATTCTCACTGGAAGTGAGGCCCCACCTTCTATaGAGAGAAAGAGAGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CGEYVLLAGLPYLFSLEVRPHLL*REREGK Trigger: TTTCCCCTCTCTTTCTCTTCATAGAAGGTGGGGCCT...CACTTCCAGTGAGAATAGATAAGGGAGCCCAGCCAGAAGAACATATTCCCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCATCCCTGTTGTCCTCTaGGAAGCTCCACCCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: PPLFQVLHSLASYQIFLIIPVVL*EAPPSN Trigger: GTTGCTGGGTGGAGCTTCTCAGAGGACAACAGGGAT...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | CCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCCCACAGCCAAACAGTaGATGAAGCTTGGGGACTTT | + |
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Preference number: 2 (lower is better) Translates to: PMPPLFQVLHSLASYQIFPTAKQ*MKLGDF Trigger: AAAGTCCCCAAGCTTCATTCACTGTTTGGCTGTGGG...GAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCAGGCCCCACCTTCTATaGAGAGAAAGAGAGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PPLFQVLHSLASYQIFLIRPHLL*REREGK Trigger: TTTCCCCTCTCTTTCTCTTCATAGAAGGTGGGGCCT...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGGAATATGTTCTTCTGGCTGGGCTCCCTTATCTATTCTCACTGGAAGTGATCTTTGTAGAGATTTaGAGTGGCATGGTAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: CGEYVLLAGLPYLFSLEVIFVEI*SGMVGG Trigger: TCCCCCTACCATGCCACTTCAAATCTCTACAAAGAT...CACTTCCAGTGAGAATAGATAAGGGAGCCCAGCCAGAAGAACATATTCCCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGCAGCCAAACAGTGAATaGAGCTTGGGGACTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: ESRALGYWLVHNVVPPIGQPNSE*SLGTFM Trigger: CATAAAAGTCCCCAAGCTTCATTCACTGTTTGGCTG...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | CCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCAGCCAAACAGTGAATaGAGCTTGGGGACTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: PMPPLFQVLHSLASYQIFQPNSE*SLGTFM Trigger: CATAAAAGTCCCCAAGCTTCATTCACTGTTTGGCTG...GAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGGAGAGACCACCAAATTaGACTCCAAAGTGGTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: ESRALGYWLVHNVVPPIGERPPN*TPKWLY Trigger: GTACAACCACTTTGGAGTGCAATTTGGTGGTCTCTC...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCAGAAATGCAGGGATGTaGTATGGAGCAGAGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: PMPPLFQVLHSLASYQIFRNAGM*YGAENE Trigger: CTCATTCTCTGCTCCATACCACATCCCTGCATTTCT...GAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCAGAAATGCAGGGATGTaGTATGGAGCAGAGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPRNAGM*YGAENE Trigger: CTCATTCTCTGCTCCATACCACATCCCTGCATTTCT...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCATCTTTGTAGAGATTTaGAGTGGCATGGTAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PPLFQVLHSLASYQIFLIIFVEI*SGMVGG Trigger: TCCCCCTACCATGCCACTTCAAATCTCTACAAAGAT...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGATAAGTCAGAGACCTGGGATAAAGGAGGTATCCAAAAATCAATAGTAGTGCCCACAGCCAAACAGTaGATGAAGCTTGGGGACTTT | + |
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Preference number: 2 (lower is better) Translates to: QDKSETWDKGGIQKSIVVPTAKQ*MKLGDF Trigger: AAAGTCCCCAAGCTTCATTCACTGTTTGGCTGTGGG...CACTACTATTGATTTTTGGATACCTCCTTTATCCCAGGTCTCTGACTTATCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCGAATGTGCTGTGTCTTaGGATTTTGGTCTTAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPECAVS*DFGLRH Trigger: ATGCCTAAGACCAAAATCTCAAGACACAGCACATTC...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCAGCAGATATGCAGCTTaGTCTTCACAAAGGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PPLFQVLHSLASYQIFLISRYAA*SSQRFL Trigger: CAGGAACCTTTGTGAAGAGCAAGCTGCATATCTGCT...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCACCCTCAACAGAATGTaGTGTGTCTTGAGATTTTGG | + |
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Preference number: 2 (lower is better) Translates to: PMPPLFQVLHSLASYQIFTLNRM*CVLRFW Trigger: CCAAAATCTCAAGACACAGCACATTCTGTTGAGGGT...GAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCGAGAGACCACCAAATTaGACTCCAAAGTGGTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: PPLFQVLHSLASYQIFLIERPPN*TPKWLY Trigger: GTACAACCACTTTGGAGTGCAATTTGGTGGTCTCTC...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCTGTAGAGATTTGAAGTaGCATGGTAGGGGGATACAA | + |
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Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPCRDLK*HGRGIQ Trigger: TTGTATCCCCCTACCATGCCACTTCAAATCTCTACA...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCGATAAGTCAGAGACCTaGGATAAAGGAGGTATCCAA | + |
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Preference number: 2 (lower is better) Translates to: PMPPLFQVLHSLASYQIFDKSET*DKGGIQ Trigger: TTGGATACCTCCTTTATCCCAGGTCTCTGACTTATC...GAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGGATAAGTCAGAGACCTaGGATAAAGGAGGTATCCAA | + |
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Preference number: 2 (lower is better) Translates to: ESRALGYWLVHNVVPPIGDKSET*DKGGIQ Trigger: TTGGATACCTCCTTTATCCCAGGTCTCTGACTTATC...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCCTGATCATGGATCTTTaGAACAAAGAAAGACTGGGC | + |
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Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPLIMDL*NKERLG Trigger: GCCCAGTCTTTCTTTGTTCCAAAGATCCATGATCAG...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR CAA 90 bp | TCCAAAGTGGTTGTACAAGATTGTACTTCCACTGGAAATGAAGAATaGTTCCCCTCAATCCACACCCTCAACAGAATGTGCTGTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SKVVVQDCTSTGNEE*FPSIHTLNRMCCVL Trigger: CAAGACACAGCACATTCTGTTGAGGGTGTGGATTGAGGGGAACAATTCTTCATTTCCAGTGGAAGTACAATCTTGTACAACCACTTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGGAAGTGTCTTTGTGGGATGTTGGATCATCTCTTAGAAATATGTCCAGGCATGTCTACAAGAAATaGAGGGATGTGGTATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SWEVSLWDVGSSLRNMSRHVYKK*RDVVWS Trigger: GCTCCATACCACATCCCTGCATTTCTTGTAGACATG...CCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | AGAATTGTTCCCCTCAATCCACACCCTCAACAGAATGTGCTGTGTCTTGAGATTCTGAAAGGGAAGCAGTaGGTGGGATATAAAATGAAT | + |
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Preference number: 2 (lower is better) Translates to: RIVPLNPHPQQNVLCLEILKGKQ*VGYKMN Trigger: ATTCATTTTATATCCCACTCACTGCTTCCCTTTCAG...AATCTCAAGACACAGCACATTCTGTTGAGGGTGTGGATTGAGGGGAACAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCCTGAAAGGGAAGCAGTaGGTGGGATATAAAATGAAT | + |
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Preference number: 2 (lower is better) Translates to: PPLFQVLHSLASYQIFLILKGKQ*VGYKMN Trigger: ATTCATTTTATATCCCACTCACTGCTTCCCTTTCAG...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGATAAGTCAGAGACCTGGGATAAAGGAGGTATCCAAAAATCAATAGTAGTGATCTTTGTAGAGATTTaGAGTGGCATGGTAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QDKSETWDKGGIQKSIVVIFVEI*SGMVGG Trigger: TCCCCCTACCATGCCACTTCAAATCTCTACAAAGAT...CACTACTATTGATTTTTGGATACCTCCTTTATCCCAGGTCTCTGACTTATCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAACTCGGGCAACTGTATATCACACTATTATGATAAAAGGAAACTCTCTCCCCACAGCCAAACAGTaGATGAAGCTTGGGGACTTT | + |
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Preference number: 2 (lower is better) Translates to: CRTRATVYHTIMIKGNSLPTAKQ*MKLGDF Trigger: AAAGTCCCCAAGCTTCATTCACTGTTTGGCTGTGGG...GAGAGAGTTTCCTTTTATCATAATAGTGTGATATACAGTTGCCCGAGTTCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGGAAGTGTCTTTGTGGGATGTTGGATCATCTCTTAGAAATATGTCCAGGGTATGGAGCAGAGAATaGGAGAATAGCCAGTCAATA | + |
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Preference number: 2 (lower is better) Translates to: SWEVSLWDVGSSLRNMSRVWSRE*ENSQSI Trigger: TATTGACTGGCTATTCTCTCATTCTCTGCTCCATAC...CCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCTTGTTAAGAATTCTCTaGAATCTGCAACTGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPLLRIL*NLQLMR Trigger: CCTCATCAGTTGCAGATTTCAGAGAATTCTTAACAA...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCCATTCTTTAATTGAGTaGCATCTAGGTTGTTTCCGA | + |
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Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPHSLIE*HLGCFR Trigger: TCGGAAACAACCTAGATGTCACTCAATTAAAGAATG...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTTGCAGTTTTCCATTaGTTTTCAAGGCCATATAGC | + |
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Preference number: 2 (lower is better) Translates to: ESRALGYWLVHNVVPPIGFAVFH*FSRPYS Trigger: GCTATATGGCCTTGAAAATCAATGGAAAACTGCAAA...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCTATCTCAAAAGCTATTaGCTGTGTGGGGAATATGTT | + |
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Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPYLKSY*LCGEYV Trigger: AACATATTCCCCACACAGGCAATAGCTTTTGAGATA...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGGAAGTGTCTTTGTGGGATGTTGGATCATCTCTTAGAAATATGTCCAGGTGTAGAGATTTGAAGTaGCATGGTAGGGGGATACAA | + |
|
Preference number: 2 (lower is better) Translates to: SWEVSLWDVGSSLRNMSRCRDLK*HGRGIQ Trigger: TTGTATCCCCCTACCATGCCACTTCAAATCTCTACA...CCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTGTTCCCCTCAATCCACACCCTCAACAGAATGTGCTGTGTCTTGAGATTACAGCACTGGATATATaGAACCTAAAATCTACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RIVPLNPHPQQNVLCLEITALDI*NLKSTS Trigger: GGAGGTAGATTTTAGGTTCCATATATCCAGTGCTGT...AATCTCAAGACACAGCACATTCTGTTGAGGGTGTGGATTGAGGGGAACAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCACAGCACTGGATATATaGAACCTAAAATCTACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PPLFQVLHSLASYQIFLITALDI*NLKSTS Trigger: GGAGGTAGATTTTAGGTTCCATATATCCAGTGCTGT...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTGGGAAGTGTCTTTGTGGGATGTTGGATCATCTCTTAGAAATATGTCCAGGGATAAGTCAGAGACCTaGGATAAAGGAGGTATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SWEVSLWDVGSSLRNMSRDKSET*DKGGIQ Trigger: TTGGATACCTCCTTTATCCCAGGTCTCTGACTTATC...CCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCTGCTATGAAAATAGTTaGGAAGTGTCTTTGTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPCYENS*EVSLWD Trigger: ATCCCACAAAGACACTTCCCAACTATTTTCATAGCA...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CAA 90 bp | CCCCTCAATCCACACCCTCAACAGAATGTGCTGTGTCTTGAGATTTaGGTCTTAGGCATTCTAATGCGTATAAGATGTAACATTAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: PLNPHPQQNVLCLEI*VLGILMRIRCNIRL Trigger: AAGTCTAATGTTACATCTTATACGCATTAGAATGCCTAAGACCAAAATCTCAAGACACAGCACATTCTGTTGAGGGTGTGGATTGAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGATAAGTCAGAGACCTGGGATAAAGGAGGTATCCAAAAATCAATAGTAGTGGTATGGAGCAGAGAATaGGAGAATAGCCAGTCAATA | + |
|
Preference number: 2 (lower is better) Translates to: QDKSETWDKGGIQKSIVVVWSRE*ENSQSI Trigger: TATTGACTGGCTATTCTCTCATTCTCTGCTCCATAC...CACTACTATTGATTTTTGGATACCTCCTTTATCCCAGGTCTCTGACTTATCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTGGGAAGTGTCTTTGTGGGATGTTGGATCATCTCTTAGAAATATGTCCAGGTACTTCCACTGGAAATaGAGAATTGTTCCCCTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SWEVSLWDVGSSLRNMSRYFHWK*RIVPLN Trigger: ATTGAGGGGAACAATTCTTCATTTCCAGTGGAAGTA...CCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCCATTCTTTAATTGAGTaGCATCTAGGTTGTTTCCGA | + |
|
Preference number: 2 (lower is better) Translates to: PPLFQVLHSLASYQIFLIHSLIE*HLGCFR Trigger: TCGGAAACAACCTAGATGTCACTCAATTAAAGAATG...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCGAACATTTCATTATGTaGTTCTCAGCGATTCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PMPPLFQVLHSLASYQIFEHFIM*FSAIQD Trigger: ATCTTGAATCGCTGAGAAGCACATAATGAAATGTTC...GAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCGAACATTTCATTATGTaGTTCTCAGCGATTCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPEHFIM*FSAIQD Trigger: ATCTTGAATCGCTGAGAAGCACATAATGAAATGTTC...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGATAAGTCAGAGACCTGGGATAAAGGAGGTATCCAAAAATCAATAGTAGTGTGTAGAGATTTGAAGTaGCATGGTAGGGGGATACAA | + |
|
Preference number: 2 (lower is better) Translates to: QDKSETWDKGGIQKSIVVCRDLK*HGRGIQ Trigger: TTGTATCCCCCTACCATGCCACTTCAAATCTCTACA...CACTACTATTGATTTTTGGATACCTCCTTTATCCCAGGTCTCTGACTTATCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCTTTCACATGTGTTTCTaGCATTATTACTGTGCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPFHMCF*HYYCAF Trigger: AAAGGCACAGTAATAATGCCAGAAACACATGTGAAA...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGATAAGTCAGAGACCTGGGATAAAGGAGGTATCCAAAAATCAATAGTAGTGCTGAAAGGGAAGCAGTaGGTGGGATATAAAATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: QDKSETWDKGGIQKSIVVLKGKQ*VGYKMN Trigger: ATTCATTTTATATCCCACTCACTGCTTCCCTTTCAG...CACTACTATTGATTTTTGGATACCTCCTTTATCCCAGGTCTCTGACTTATCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGAACTCGGGCAACTGTATATCACACTATTATGATAAAAGGAAACTCTCTCCAGCCAAACAGTGAATaGAGCTTGGGGACTTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: CRTRATVYHTIMIKGNSLQPNSE*SLGTFM Trigger: CATAAAAGTCCCCAAGCTTCATTCACTGTTTGGCTG...GAGAGAGTTTCCTTTTATCATAATAGTGTGATATACAGTTGCCCGAGTTCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGTTTCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTAGCAGATATGCAGCTTaGTCTTCACAAAGGTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VFLALLLCLSSCLESLGCSRYAA*SSQRFL Trigger: CAGGAACCTTTGTGAAGAGCAAGCTGCATATCTGCT...ACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCGAACATTTCATTATGTaGTTCTCAGCGATTCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PPLFQVLHSLASYQIFLIEHFIM*FSAIQD Trigger: ATCTTGAATCGCTGAGAAGCACATAATGAAATGTTC...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTTCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTAGAAATGCAGGGATGTaGTATGGAGCAGAGAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: VFLALLLCLSSCLESLGCRNAGM*YGAENE Trigger: CTCATTCTCTGCTCCATACCACATCCCTGCATTTCT...ACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR CAA 90 bp | ATCCCTTTCACATGTGTTTCTGGCATTATTACTGTGCCTTTCTTCTaGTTTAGAATCTTTGGGTTGTGCAATATAGCCTGGTACGTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: IPFTCVSGIITVPFF*FRIFGLCNIAWYVY Trigger: ATACACGTACCAGGCTATATTGCACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACACATGTGAAAGGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CAA 90 bp | CCCCATTCTTCAAGTTCTTTCATTTCAAAGACCATAAAGCTCACTTaGTGTTGCTGTAGAACTCGGGCAACTGTATATCACACTATTATG | + |
|
Preference number: 2 (lower is better) Translates to: PHSSSSFISKTIKLT*CCCRTRATVYHTIM Trigger: CATAATAGTGTGATATACAGTTGCCCGAGTTCTACAGCAACACAAAGTGAGCTTTATGGTCTTTGAAATGAAAGAACTTGAAGAATGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAACTCGGGCAACTGTATATCACACTATTATGATAAAAGGAAACTCTCTCGAATGTGCTGTGTCTTaGGATTTTGGTCTTAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: CRTRATVYHTIMIKGNSLECAVS*DFGLRH Trigger: ATGCCTAAGACCAAAATCTCAAGACACAGCACATTC...GAGAGAGTTTCCTTTTATCATAATAGTGTGATATACAGTTGCCCGAGTTCTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR CAA 90 bp | TCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTaGTGCAATATAGCCTGGTACGTGTATTTCATGACTATTATCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SGIITVPFFLFRIFG*CNIAWYVYFMTIIH Trigger: GTGGATAATAGTCATGAAATACACGTACCAGGCTATATTGCACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTTACTTCCACTGGAAATaGAGAATTGTTCCCCTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VFLALLLCLSSCLESLGCYFHWK*RIVPLN Trigger: ATTGAGGGGAACAATTCTTCATTTCCAGTGGAAGTA...ACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGATAAGTCAGAGACCTGGGATAAAGGAGGTATCCAAAAATCAATAGTAGTGACAGTGAATGAAGCTTaGGGACTTTTATGGAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: QDKSETWDKGGIQKSIVVTVNEA*GLLWKN Trigger: ATTTTTCCATAAAAGTCCCCAAGCTTCATTCACTGT...CACTACTATTGATTTTTGGATACCTCCTTTATCCCAGGTCTCTGACTTATCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGAACTCGGGCAACTGTATATCACACTATTATGATAAAAGGAAACTCTCTCACAGCACTGGATATATaGAACCTAAAATCTACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: CRTRATVYHTIMIKGNSLTALDI*NLKSTS Trigger: GGAGGTAGATTTTAGGTTCCATATATCCAGTGCTGT...GAGAGAGTTTCCTTTTATCATAATAGTGTGATATACAGTTGCCCGAGTTCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTTATCTCAAAAGCTATTaGCTGTGTGGGGAATATGTT | + |
|
Preference number: 2 (lower is better) Translates to: VFLALLLCLSSCLESLGCYLKSY*LCGEYV Trigger: AACATATTCCCCACACAGGCAATAGCTTTTGAGATA...ACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGAACTCGGGCAACTGTATATCACACTATTATGATAAAAGGAAACTCTCTCCTGGCATTATTACTGTaGCTTTCTTCTTGTTTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CRTRATVYHTIMIKGNSLLALLL*LSSCLE Trigger: TTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAG...GAGAGAGTTTCCTTTTATCATAATAGTGTGATATACAGTTGCCCGAGTTCTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTACAGTGAATGAAGCTTaGGGACTTTTATGGAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: VFLALLLCLSSCLESLGCTVNEA*GLLWKN Trigger: ATTTTTCCATAAAAGTCCCCAAGCTTCATTCACTGT...ACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTAATTGCACTCCAAAGTaGTTGTACAAGATTGTACTT | + |
|
Preference number: 2 (lower is better) Translates to: VFLALLLCLSSCLESLGCNCTPK*LYKIVL Trigger: AAGTACAATCTTGTACAACCACTTTGGAGTGCAATT...ACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGAACTCGGGCAACTGTATATCACACTATTATGATAAAAGGAAACTCTCTCAATTGCACTCCAAAGTaGTTGTACAAGATTGTACTT | + |
|
Preference number: 2 (lower is better) Translates to: CRTRATVYHTIMIKGNSLNCTPK*LYKIVL Trigger: AAGTACAATCTTGTACAACCACTTTGGAGTGCAATT...GAGAGAGTTTCCTTTTATCATAATAGTGTGATATACAGTTGCCCGAGTTCTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGAACTCGGGCAACTGTATATCACACTATTATGATAAAAGGAAACTCTCTCTTTCACATGTGTTTCTaGCATTATTACTGTGCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: CRTRATVYHTIMIKGNSLFHMCF*HYYCAF Trigger: AAAGGCACAGTAATAATGCCAGAAACACATGTGAAA...GAGAGAGTTTCCTTTTATCATAATAGTGTGATATACAGTTGCCCGAGTTCTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CCA 72 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VPPIGLQIPLAP*VLSLAPPLGAL Trigger: CAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR CCA 72 bp | CTCACTGGAAGTGGCTATCTTTGTAGAGATTTGAAGTaGCATGGTAGGGGGATACAAAGGGAGGCCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: LTGSGYLCRDLK*HGRGIQREAPP Trigger: AGGTGGGGCCTCCCTTTGTATCCCCCTACCATGCCACTTCAAATCTCTACAAAGATAGCCACTTCCAGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CCA 72 bp | CTGGAGCTAGGGCTATCTCAAAAGCTATTGCCTGTGTaGGGAATATGTTCTTCTGGCTGGGCTCCCTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: LELGLSQKLLPV*GICSSGWAPLS Trigger: AGATAAGGGAGCCCAGCCAGAAGAACATATTCCCCACACAGGCAATAGCTTTTGAGATAGCCCTAGCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CAA 90 bp | CCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCAAGCACCAATCCCTGTaGTCCTCTGAGAAGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PMPPLFQVLHSLASYQIFKHQSL*SSEKLH Trigger: GTGGAGCTTCTCAGAGGACAACAGGGATTGGTGCTT...GAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR TCA 72 bp | CTATTCTCACTGGAAGTGGCTATCTTTGTAGAGATTTaGAGTGGCATGGTAGGGGGATACAAAGGGAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LFSLEVAIFVEI*SGMVGGYKGRP Trigger: GGGCCTCCCTTTGTATCCCCCTACCATGCCACTTCAAATCTCTACAAAGATAGCCACTTCCAGTGAGAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCGTTCCACCTATAGGGTaGCAGATCCCTTTAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPVPPIG*QIPLAP Trigger: AGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGGAAGTGTCTTTGTGGGATGTTGGATCATCTCTTAGAAATATGTCCAGGAAGCACCAATCCCTGTaGTCCTCTGAGAAGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SWEVSLWDVGSSLRNMSRKHQSL*SSEKLH Trigger: GTGGAGCTTCTCAGAGGACAACAGGGATTGGTGCTT...CCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR TCA 72 bp | ATACAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: IQFACPMGLSFQ*WPTRPSFDTYA Trigger: TGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGAGTTGGGAAGTGTCTTaGTGGGATGTTGGATCATCT | + |
|
Preference number: 3 (lower is better) Translates to: ESRALGYWLVHNVVPPIGSWEVS*WDVGSS Trigger: AGATGATCCAACATCCCACAAAGACACTTCCCAACT...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCCCTGATCATGGATCTTaGGAACAAAGAAAGACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPPDHGS*EQRKTG Trigger: CCCAGTCTTTCTTTGTTCCAAAGATCCATGATCAGG...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGACCATAAAGCTCACTTaGTGTTGCTGTAGAACTCGG | + |
|
Preference number: 3 (lower is better) Translates to: ESRALGYWLVHNVVPPIGTIKLT*CCCRTR Trigger: CCGAGTTCTACAGCAACACAAAGTGAGCTTTATGGT...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGCTATCTCAAAAGCTATaGCCTGTGTGGGGAATATGT | + |
|
Preference number: 3 (lower is better) Translates to: ESRALGYWLVHNVVPPIGLSQKL*PVWGIC Trigger: ACATATTCCCCACACAGGCAATAGCTTTTGAGATAG...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTATCTCAAAAGCTATaGCCTGTGTGGGGAATATGT | + |
|
Preference number: 3 (lower is better) Translates to: PMPPLFQVLHSLASYQIFLSQKL*PVWGIC Trigger: ACATATTCCCCACACAGGCAATAGCTTTTGAGATAG...GAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGCTGTGTCTTGAGATTTaGGTCTTAGGCATTCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: ESRALGYWLVHNVVPPIGLCLEI*VLGILM Trigger: CATTAGAATGCCTAAGACCAAAATCTCAAGACACAG...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTTAGAATCTTTGGGTaGTGCAATATAGCCTGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ESRALGYWLVHNVVPPIGFRIFG*CNIAWY Trigger: GTACCAGGCTATATTGCACAACCCAAAGATTCTAAA...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR TCA 72 bp | CCTCAATCCACACCCTCAACAGAATGTGCTGTGTCTTaGGATTTTGGTCTTAGGCATTCTAATGCGTATAAG | + |
|
Preference number: 3 (lower is better) Translates to: PQSTPSTECAVS*DFGLRHSNAYK Trigger: CTTATACGCATTAGAATGCCTAAGACCAAAATCTCAAGACACAGCACATTCTGTTGAGGGTGTGGATTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR TCA 72 bp | CAAAGTGGTTGTACAAGATTGTACTTCCACTGGAAATaGAGAATTGTTCCCCTCAATCCACACCCTCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: QSGCTRLYFHWK*RIVPLNPHPQQ Trigger: CTGTTGAGGGTGTGGATTGAGGGGAACAATTCTTCATTTCCAGTGGAAGTACAATCTTGTACAACCACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGGAAGTGTCTTTGTGGGATGTTGGATCATCTCTTAGAAATATGTCCAGGCTATCTCAAAAGCTATaGCCTGTGTGGGGAATATGT | + |
|
Preference number: 3 (lower is better) Translates to: SWEVSLWDVGSSLRNMSRLSQKL*PVWGIC Trigger: ACATATTCCCCACACAGGCAATAGCTTTTGAGATAG...CCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTGTCTTTGTGGGATGTaGGATCATCTCTTAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: ESRALGYWLVHNVVPPIGCLCGM*DHLLEI Trigger: TATTTCTAAGAGATGATCCAACATCCCACAAAGACA...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CCA 72 bp | CCGAAATTTATCATGTCTACAAGAAATGCAGGGATGTaGTATGGAGCAGAGAATGAGAGAATAGCCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PKFIMSTRNAGM*YGAENERIASQ Trigger: TTGACTGGCTATTCTCTCATTCTCTGCTCCATACCACATCCCTGCATTTCTTGTAGACATGATAAATTTCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCAAAATGCATGTCTTTTaGGACCTAGGTTACCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: PPLFQVLHSLASYQIFLIKMHVF*DLGYLT Trigger: AGTAAGGTAACCTAGGTCCAAAAAGACATGCATTTT...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGAACTCGGGCAACTGTATATCACACTATTATGATAAAAGGAAACTCTCTCCTGTGTCTTGAGATTTaGGTCTTAGGCATTCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: CRTRATVYHTIMIKGNSLLCLEI*VLGILM Trigger: CATTAGAATGCCTAAGACCAAAATCTCAAGACACAG...GAGAGAGTTTCCTTTTATCATAATAGTGTGATATACAGTTGCCCGAGTTCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR GCA 72 bp | ACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTaGAATATAGCCTGGTACGTGTATTTCATGACTATT | + |
|
Preference number: 3 (lower is better) Translates to: TVPFFLFRIFGL*NIAWYVYFMTI Trigger: AATAGTCATGAAATACACGTACCAGGCTATATTGCACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGAACTCGGGCAACTGTATATCACACTATTATGATAAAAGGAAACTCTCTCTGTCTTTGTGGGATGTaGGATCATCTCTTAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: CRTRATVYHTIMIKGNSLCLCGM*DHLLEI Trigger: TATTTCTAAGAGATGATCCAACATCCCACAAAGACA...GAGAGAGTTTCCTTTTATCATAATAGTGTGATATACAGTTGCCCGAGTTCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTTCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTAAAATGCATGTCTTTTaGGACCTAGGTTACCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: VFLALLLCLSSCLESLGCKMHVF*DLGYLT Trigger: AGTAAGGTAACCTAGGTCCAAAAAGACATGCATTTT...ACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CAA 72 bp | GGCCCAACCCACCGAAGGGGCAAGCACCAATCCCTGTaGTCCTCTGAGAAGCTCCACCCAGCAACATACTTA | + |
|
Preference number: 4 (lower is better) Translates to: GPTHRRGKHQSL*SSEKLHPATYL Trigger: TAAGTATGTTGCTGGGTGGAGCTTCTCAGAGGACAACAGGGATTGGTGCTTGCCCCTTCGGTGGGTTGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CAA 72 bp | TGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTaGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVADPFSS*GTFSSSSIGSP Trigger: AGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCGAGCACTATTCCAATTaGCATGGTTCTCAAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPEHYSN*HGSQVH Trigger: ATGGACTTGAGAACCATGGCAATTGGAATAGTGCTC...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGGAGCACTATTCCAATTaGCATGGTTCTCAAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESRALGYWLVHNVVPPIGEHYSN*HGSQVH Trigger: ATGGACTTGAGAACCATGGCAATTGGAATAGTGCTC...CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTTCCCCCAAACCAGAACCAGGATaGTCTGTACAGCTCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPQLHFQCYPKSPPYPSPKPEPG*SVQLCF Trigger: AAAACAGAGCTGTACAGACCATCCTGGTTCTGGTTT...GGGGGAAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CAA 72 bp | CTTCCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATaGGCCTCATATCAAATTTTCCTTATCCCTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPMPPLFQVLHS*ASYQIFLIPFT Trigger: TGTGAAAGGGATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CAA 72 bp | GTTGTACAAGATTGTACTTCCACTGGAAATGAAGAATaGTTCCCCTCAATCCACACCCTCAACAGAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVQDCTSTGNEE*FPSIHTLNRMC Trigger: GCACATTCTGTTGAGGGTGTGGATTGAGGGGAACAATTCTTCATTTCCAGTGGAAGTACAATCTTGTACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCCTTATCTCCAGGAGAGACAAATaGATAGGTTCACAAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLFQVLHSLASYQIFLISRRDK*IGSQTL Trigger: CAAAGTTTGTGAACCTATCCATTTGTCTCTCCTGGA...GATAAGGAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CAA 72 bp | TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTaGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YWLVHNVVPPIG*QIPLAPWVLSL Trigger: TAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR GCA 90 bp | CAGGATAAGTCAGAGACCTGGGATAAAGGAGGTATCCAAAAATCAATAGTAGTGGAGCACTATTCCAATTaGCATGGTTCTCAAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDKSETWDKGGIQKSIVVEHYSN*HGSQVH Trigger: ATGGACTTGAGAACCATGGCAATTGGAATAGTGCTC...CACTACTATTGATTTTTGGATACCTCCTTTATCCCAGGTCTCTGACTTATCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGAAGTGTCTTTGTGGGATGTTGGATCATCTCTTAGAAATATGTCCAGGTCCAGGAGAGACAAATaGATAGGTTCACAAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWEVSLWDVGSSLRNMSRSRRDK*IGSQTL Trigger: CAAAGTTTGTGAACCTATCCATTTGTCTCTCCTGGA...CCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CAA 72 bp | GCTATGAAAATAGTTGGGAAGTGTCTTTGTGGGATGTaGGATCATCTCTTAGAAATATGTCCAGGAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AMKIVGKCLCGM*DHLLEICPGRL Trigger: TAGCCTTCCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACTATTTTCATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTTCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTAAACCAGAACCAGGATaGTCTGTACAGCTCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLALLLCLSSCLESLGCKPEPG*SVQLCF Trigger: AAAACAGAGCTGTACAGACCATCCTGGTTCTGGTTT...ACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTTCTGGCATTATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTTGTTCCAGGAGAGACAAATaGATAGGTTCACAAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFLALLLCLSSCLESLGCSRRDK*IGSQTL Trigger: CAAAGTTTGTGAACCTATCCATTTGTCTCTCCTGGA...ACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAATAATGCCAGAAACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| 3UTR CAA 72 bp | ATTACTGTGCCTTTCTTCTTGTTTAGAATCTTTGGGTaGTGCAATATAGCCTGGTACGTGTATTTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: ITVPFFLFRIFG*CNIAWYVYFMT Trigger: AGTCATGAAATACACGTACCAGGCTATATTGCACAACCCAAAGATTCTAAACAAGAAGAAAGGCACAGTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGGGAATATGTTCTTCTGGCTGGGCTCCCTTATCTATTCTCACTGGAAGTGAGAGCACTATTCCAATaGCCATGGTTCTCAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGEYVLLAGLPYLFSLEVRALFQ*PWFSSP Trigger: TGGACTTGAGAACCATGGCAATTGGAATAGTGCTCT...CACTTCCAGTGAGAATAGATAAGGGAGCCCAGCCAGAAGAACATATTCCCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR CAA 90 bp | CCTATGCCCCCTCTCTTCCAGGTTCTTCACTCATTGGCCTCATATCAAATTTTCAGAGCACTATTCCAATaGCCATGGTTCTCAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PMPPLFQVLHSLASYQIFRALFQ*PWFSSP Trigger: TGGACTTGAGAACCATGGCAATTGGAATAGTGCTCT...GAAAATTTGATATGAGGCCAATGAGTGAAGAACCTGGAAGAGAGGGGGCATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS GCA 90 bp | GCACCCGAAATCATTGAATACCAGATTCCACCCAAAGGCTTCAAATaGCCCAGGGATTCCGATGGAGATATTAATCAAGGAGTTGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: APEIIEYQIPPKGFK*PRDSDGDINQGVGY Trigger: ATATCCAACTCCTTGATTAATATCTCCATCGGAATCCCTGGGGCATTTGAAGCCTTTGGGTGGAATCTGGTATTCAATGATTTCGGGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGAAGTGTCTTTGTGGGATGTTGGATCATCTCTTAGAAATATGTCCAGGAGAGCACTATTCCAATaGCCATGGTTCTCAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SWEVSLWDVGSSLRNMSRRALFQ*PWFSSP Trigger: TGGACTTGAGAACCATGGCAATTGGAATAGTGCTCT...CCTGGACATATTTCTAAGAGATGATCCAACATCCCACAAAGACACTTCCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS TCA 72 bp | GGATGGTCTGTACAGCTCTGTTTTCAGTGGAAGTTCTaGGGGAAGAATGAGCATGAAGGGTATGCTGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: GWSVQLCFQWKF*GKNEHEGYAEP Trigger: GGGTTCAGCATACCCTTCATGCTCATTCTTCCCTCAGAACTTCCACTGAAAACAGAGCTGTACAGACCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS CAA 72 bp | TACCAAGTGCTGTCTGAAGTGAGAGCACTATTCCAATaGCCATGGTTCTCAAGTCCATTCTGGCTTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YQVLSEVRALFQ*PWFSSPFWLSA Trigger: TGCTGAAAGCCAGAATGGACTTGAGAACCATGGCAATTGGAATAGTGCTCTCACTTCAGACAGCACTTGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS GCA 72 bp | ATCATTGAATACCAGATTCCACCCAAAGGCTTCAAATaGCCCAGGGATTCCGATGGAGATATTAATCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IIEYQIPPKGFK*PRDSDGDINQG Trigger: TCCTTGATTAATATCTCCATCGGAATCCCTGGGGCATTTGAAGCCTTTGGGTGGAATCTGGTATTCAATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
||
| CDS CAA 72 bp | GCCCCAGGGATTCCGATGGAGATATTAATCAAGGAGTaGGATATGAACATATGTATAAAAATCCTATATATG | + |
|
Preference number: 6 (lower is better) Translates to: APGIPMEILIKE*DMNICIKILYM Trigger: CATATATAGGATTTTTATACATATGTTCATATCCAACTCCTTGATTAATATCTCCATCGGAATCCCTGGGGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179914.3 ENSMUST00000232943.2 ENSMUST00000233597.2 |
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