Pregenerated sensors for VMN1R226 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042848Ensembl transcript IDs: ENSMUST00000061756.4, ENSMUST00000232708.2, ENSMUST00000232818.2, ENSMUST00000233159.2, ENSMUST00000233722.2, ENSMUST00000233808.2, ENSMUST00000233959.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATAAAGCTCATCTTCTCCCACTGAGGCCAGAGCAGGCAGACCACTaGTACATATGTACCAGGGGCCTCAGAACAGTCCCTGTATGCTCC | + |
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Preference number: 1 (lower is better) Translates to: DKAHLLPLRPEQADH*YICTRGLRTVPVCS Trigger: GGAGCATACAGGGACTGTTCTGAGGCCCCTGGTACATATGTAGCAGTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR TCA 90 bp | CTCATGTCTTCCATCATGATCAAGATAAAGCTCATCTTCTCCCACTaGGGCCAGAGCAGGCAGACCACTGCTACATATGTACCAGGGGCC | + |
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Preference number: 1 (lower is better) Translates to: LMSSIMIKIKLIFSH*GQSRQTTATYVPGA Trigger: GGCCCCTGGTACATATGTAGCAGTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATCTTGATCATGATGGAAGACATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 90 bp | TCATGGCCTAATGTCAGATTCCTGCCTGAGCTTACTTCCTTGTCATaGTCAATGTCAGATTCCTGCCTGAAGCCCATTTCCTCATCCTTG | + |
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Preference number: 1 (lower is better) Translates to: SWPNVRFLPELTSLS*SMSDSCLKPISSSL Trigger: CAAGGATGAGGAAATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAGGAATCTGACATTAGGCCATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR TCA 90 bp | GGCCACTCACTCCATCTGACTCCCATGAATATTTTCTCCCCCTTATaGAGTGGGATTGAAGCATCCTCACTTGAGCCTTTCTGTTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: GHSLHLTPMNIFSPL*SGIEASSLEPFCLL Trigger: TAACAAACAGAAAGGCTCAAGTGAGGATGCTTCAATCCCACTTCATAAGGGGGAGAAAATATTCATGGGAGTCAGATGGAGTGAGTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 90 bp | GTCATAGTATCAGTAATAGTATCAGGTCTTGGTGTCCCCTCAAGTTaGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTT | + |
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Preference number: 1 (lower is better) Translates to: VIVSVIVSGLGVPSS*PVIGLPFFQSIPHF Trigger: AAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAACTTGAGGGGACACCAAGACCTGATACTATTACTGATACTATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 90 bp | ACTACAAGTAAGGCTACTATGAACATAGCAGAACAAGTGTCCCTATaGTACAGTGGGGCATCTTTTGGTCTTATACCCAAGAGTGGTATA | + |
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Preference number: 1 (lower is better) Translates to: TTSKATMNIAEQVSL*YSGASFGLIPKSGI Trigger: TATACCACTCTTGGGTATAAGACCAAAAGATGCCCCACTGTACCATAGGGACACTTGTTCTGCTATGTTCATAGTAGCCTTACTTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 90 bp | CTTTTAGATAGGAACAATTCTGGGTCAGAAATTTTAACTGCGGATTaGTTACCCTGTCCCTCCACTTGGAGCTCTGTCTATTTATTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LLDRNNSGSEILTAD*LPCPSTWSSVYLLE Trigger: CTCCAATAAATAGACAGAGCTCCAAGTGGAGGGACAGGGTAACCAATCCGCAGTTAAAATTTCTGACCCAGAATTGTTCCTATCTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR GCA 90 bp | CAGCAGTGTTCAGATATTGTCTTATATCAACATACACAGGTCTTGTaGATGCTGTCACACAATAACTGTGCAGAAATATATTTAAATGCA | + |
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Preference number: 1 (lower is better) Translates to: QQCSDIVLYQHTQVL*MLSHNNCAEIYLNA Trigger: TGCATTTAAATATATTTCTGCACAGTTATTGTGTGACAGCATGCACAAGACCTGTGTATGTTGATATAAGACAATATCTGAACACTGCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGGGTGTCCCCTCAAGTTaGCCTGTCATTGGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PLLPRGTSPITWVSPFPVGVPSS*PVIGLP Trigger: AGGCAGCCCAATGACAGGCCAACTTGAGGGGACACC...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGCAGGTAATGGACATCTaGGGTTTTCCAGCTTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWQVMDI*GFPASC Trigger: GCAAGAAGCTGGAAAACCCCAGATGTCCATTACCTG...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGTCCATTCATTTTTCCTaGCCATCTGGCCTTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWSIHFS*PSGLLC Trigger: GCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGA...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGAAGTTGGCCTGTCATTaGGCTGCCTTTCTTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWKLACH*AAFLSV Trigger: GACTGAAAGAAAGGCAGCCCAATGACAGGCCAACTT...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGCATGTCTTTGGGGTCTaGGTTACCTCACTTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWHVFGV*VTSLKM Trigger: CATCTTAAGTGAGGTAACTCAGACCCCAAAGACATG...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGCTACACCCCTATACCTaGTGCTGTTCATATTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWLHPYT*CCSYFP Trigger: GGGAAAATATGAACAGCATCAGGTATAGGGGTGTAG...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGCGCCTTACCCCTATTTaGTTCTGTCTCAGTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: PLLPRGTSPITWVSPFPVRLTPI*FCLSQM Trigger: CATCTGACTGAGACAGAAGCAAATAGGGGTAAGGCG...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGGTCCCTATGGTACAGTaGGGCATCTTTTGGTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWVPMVQ*GIFWSY Trigger: ATAAGACCAAAAGATGCCCCACTGTACCATAGGGAC...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGCAGGTAATGGACATCTaGGGTTTTCCAGCTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PLLPRGTSPITWVSPFPVQVMDI*GFPASC Trigger: GCAAGAAGCTGGAAAACCCCAGATGTCCATTACCTG...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGTCCATTCATTTTTCCTaGCCATCTGGCCTTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PLLPRGTSPITWVSPFPVSIHFS*PSGLLC Trigger: GCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGA...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGCCCTGTCCCTCCACTTaGAGCTCTGTCTATTTATTG | + |
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Preference number: 2 (lower is better) Translates to: PLLPRGTSPITWVSPFPVPCPST*SSVYLL Trigger: CAATAAATAGACAGAGCTCCAAGTGGAGGGACAGGG...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGATTTTAACTGCGGATTaGTTACCCTGTCCCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWILTAD*LPCPST Trigger: AGTGGAGGGACAGGGTAACCAATCCGCAGTTAAAAT...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGAAGTTGGCCTGTCATTaGGCTGCCTTTCTTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: PLLPRGTSPITWVSPFPVKLACH*AAFLSV Trigger: GACTGAAAGAAAGGCAGCCCAATGACAGGCCAACTT...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCGGTGTCCCCTCAAGTTaGCCTGTCATTGGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LPELTSLSWSMSDSCLKPGVPSS*PVIGLP Trigger: AGGCAGCCCAATGACAGGCCAACTTGAGGGGACACC...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTTGGTGGCCCAGTCTCTaGAAGCTCCCTGGGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PELTSLSWSMSDSCLKPIWWPSL*KLPGVW Trigger: CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCA...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGTACTCTTGGGTTTACTaGCTGTTACTGAATGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWYSWVY*LLLNVL Trigger: AAGCACATTCAGTAACAGGCAGTAAACCCAAGAGTA...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCAGAACAGTCCCTGTATaGTCCTCATTGGTGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LPELTSLSWSMSDSCLKPRTVPV*SSLVAQ Trigger: CTGGGCCACCAATGAGGAGCATACAGGGACTGTTCT...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTGGTGTCCCCTCAAGTTaGCCTGTCATTGGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PELTSLSWSMSDSCLKPIGVPSS*PVIGLP Trigger: AGGCAGCCCAATGACAGGCCAACTTGAGGGGACACC...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCTATGCTCCTCATTGGTaGCCCAGTCTCTGGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LPELTSLSWSMSDSCLKPYAPHW*PSLWKL Trigger: GAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATA...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGCTAACTGGTGTGAATTaGAATCTCAGGTCATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWLTGVN*NLRSFD Trigger: ATCAAATGACCTGAGATTCCAATTCACACCAGTTAG...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCTCTCACCCTTCCCTGTaGCCTCATGTCTTCCATCAT | + |
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Preference number: 2 (lower is better) Translates to: LPELTSLSWSMSDSCLKPSHPSL*PHVFHH Trigger: ATGATGGAAGACATGAGGCCACAGGGAAGGGTGAGA...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGGCATATGCTGTCACTTaGGTTTTTGATCTTAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: PLLPRGTSPITWVSPFPVAYAVT*VFDLSH Trigger: ATGACTAAGATCAAAAACTCAAGTGACAGCATATGC...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTAGAACAGTCCCTGTATaGTCCTCATTGGTGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PELTSLSWSMSDSCLKPIRTVPV*SSLVAQ Trigger: CTGGGCCACCAATGAGGAGCATACAGGGACTGTTCT...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGCTAACTGGTGTGAATTaGAATCTCAGGTCATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: PLLPRGTSPITWVSPFPVLTGVN*NLRSFD Trigger: ATCAAATGACCTGAGATTCCAATTCACACCAGTTAG...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGCTTAGTCATTCTAACTaGTGTGAATTGGAATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PLLPRGTSPITWVSPFPVLSHSN*CELESQ Trigger: CTGAGATTCCAATTCACACCAGTTAGAATGACTAAG...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CATGATCAAGATAAAGCTCATCTTCTCCCACTGAGGCCAGAGCAGGCAGACCACCAGGTAATGGACATCTaGGGTTTTCCAGCTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: HDQDKAHLLPLRPEQADHQVMDI*GFPASC Trigger: GCAAGAAGCTGGAAAACCCCAGATGTCCATTACCTG...GTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATCTTGATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCCCCTGTCCCTCCACTTaGAGCTCTGTCTATTTATTG | + |
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Preference number: 2 (lower is better) Translates to: LPELTSLSWSMSDSCLKPPCPST*SSVYLL Trigger: CAATAAATAGACAGAGCTCCAAGTGGAGGGACAGGG...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTCTGTATGCTCCTCATTaGTGGCCCAGTCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PELTSLSWSMSDSCLKPILYAPH*WPSLWK Trigger: CTTCCAGAGACTGGGCCACCAATGAGGAGCATACAG...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTTTAACTGCGGATTaGTTACCCTGTCCCTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: LPELTSLSWSMSDSCLKPILTAD*LPCPST Trigger: AGTGGAGGGACAGGGTAACCAATCCGCAGTTAAAAT...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCGAGGAACGACCAGTGTaGTTTACAGTGTTTGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCEERPV*FTVFVP Trigger: TGGTACAAACACTGTAAATCACACTGGTCGTTCCTC...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCGACCAGGCTGTCAAGTaGGGTCACTTAAACAATAGT | + |
|
Preference number: 2 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCDQAVK*GHLNNS Trigger: ACTATTGTTTAAGTGACCCCACTTGACAGCCTGGTC...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCGTCCCTATGGTACAGTaGGGCATCTTTTGGTCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCVPMVQ*GIFWSY Trigger: ATAAGACCAAAAGATGCCCCACTGTACCATAGGGAC...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGATCAAGATAAAGCTCATCTTCTCCCACTGAGGCCAGAGCAGGCAGACCACCCCTTTCCACAATGTTaGGCATTTTGGTTAAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: HDQDKAHLLPLRPEQADHPFPQC*AFWLRS Trigger: TGACCTTAACCAAAATGCCCAACATTGTGGAAAGGG...GTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATCTTGATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCCCTGTCCCTCCACTTaGAGCTCTGTCTATTTATTG | + |
|
Preference number: 2 (lower is better) Translates to: LACHWAAFLSVYSPFLSLPCPST*SSVYLL Trigger: CAATAAATAGACAGAGCTCCAAGTGGAGGGACAGGG...CAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTCCCTGTCCCTCCACTTaGAGCTCTGTCTATTTATTG | + |
|
Preference number: 2 (lower is better) Translates to: PELTSLSWSMSDSCLKPIPCPST*SSVYLL Trigger: CAATAAATAGACAGAGCTCCAAGTGGAGGGACAGGG...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCATTTTAACTGCGGATTaGTTACCCTGTCCCTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCILTAD*LPCPST Trigger: AGTGGAGGGACAGGGTAACCAATCCGCAGTTAAAAT...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGGTCCCTATGGTACAGTaGGGCATCTTTTGGTCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LACHWAAFLSVYSPFLSLVPMVQ*GIFWSY Trigger: ATAAGACCAAAAGATGCCCCACTGTACCATAGGGAC...CAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGATTTTAACTGCGGATTaGTTACCCTGTCCCTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: LACHWAAFLSVYSPFLSLILTAD*LPCPST Trigger: AGTGGAGGGACAGGGTAACCAATCCGCAGTTAAAAT...CAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCTACTCTTGGGTTTACTaGCTGTTACTGAATGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCYSWVY*LLLNVL Trigger: AAGCACATTCAGTAACAGGCAGTAAACCCAAGAGTA...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTTCCATTCATTTTTCCTGGCCATCTGGCCTTCTCTGCTACACCCCTATACCGACCAGGCTGTCAAGTaGGGTCACTTAAACAATAGT | + |
|
Preference number: 2 (lower is better) Translates to: YFHSFFLAIWPSLLHPYTDQAVK*GHLNNS Trigger: ACTATTGTTTAAGTGACCCCACTTGACAGCCTGGTC...GGTATAGGGGTGTAGCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGATCAAGATAAAGCTCATCTTCTCCCACTGAGGCCAGAGCAGGCAGACCACCTAACTGGTGTGAATTaGAATCTCAGGTCATTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: HDQDKAHLLPLRPEQADHLTGVN*NLRSFD Trigger: ATCAAATGACCTGAGATTCCAATTCACACCAGTTAG...GTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATCTTGATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGATCAAGATAAAGCTCATCTTCTCCCACTGAGGCCAGAGCAGGCAGACCACCTTAGTCATTCTAACTaGTGTGAATTGGAATCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HDQDKAHLLPLRPEQADHLSHSN*CELESQ Trigger: CTGAGATTCCAATTCACACCAGTTAGAATGACTAAG...GTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATCTTGATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTTCCATTCATTTTTCCTGGCCATCTGGCCTTCTCTGCTACACCCCTATACCGTCCCTATGGTACAGTaGGGCATCTTTTGGTCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: YFHSFFLAIWPSLLHPYTVPMVQ*GIFWSY Trigger: ATAAGACCAAAAGATGCCCCACTGTACCATAGGGAC...GGTATAGGGGTGTAGCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR CAA 90 bp | TGTCATAGTATCAGTAATAGTATCAGGTCTTGGTGTCCCCTCAAGTaGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: CHSISNSIRSWCPLK*ACHWAAFLSVYSPF Trigger: AAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAACTTGAGGGGACACCAAGACCTGATACTATTACTGATACTATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTCAATTTAAGGAGCTATaGCCTAACTCATTACACCCT | + |
|
Preference number: 2 (lower is better) Translates to: PELTSLSWSMSDSCLKPIQFKEL*PNSLHP Trigger: AGGGTGTAATGAGTTAGGTCATAGCTCCTTAAATTG...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCCTAACTGGTGTGAATTaGAATCTCAGGTCATTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCLTGVN*NLRSFD Trigger: ATCAAATGACCTGAGATTCCAATTCACACCAGTTAG...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATGGTGTCCCCTCAAGTTaGCCTGTCATTGGGCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHGVPSS*PVIGLP Trigger: AGGCAGCCCAATGACAGGCCAACTTGAGGGGACACC...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGTATGCTCCTCATTGGTaGCCCAGTCTCTGGAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVYAPHW*PSLWKL Trigger: GAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATA...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGGCATATGCTGTCACTTaGGTTTTTGATCTTAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LACHWAAFLSVYSPFLSLAYAVT*VFDLSH Trigger: ATGACTAAGATCAAAAACTCAAGTGACAGCATATGC...CAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTCTAACTGGTGTGAATTaGAATCTCAGGTCATTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: PELTSLSWSMSDSCLKPILTGVN*NLRSFD Trigger: ATCAAATGACCTGAGATTCCAATTCACACCAGTTAG...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTAAGTTTGATTGGCCATaGTATTTGACTAGAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: PELTSLSWSMSDSCLKPIKFDWP*YLTRAT Trigger: TGTTGCTCTAGTCAAATACCATGGCCAATCAAACTT...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGTCTCATTCATTTGCCTaGAAAATTCATGATGTCATC | + |
|
Preference number: 2 (lower is better) Translates to: LACHWAAFLSVYSPFLSLSHSFA*KIHDVI Trigger: GATGACATCATGAATTTTGCAGGCAAATGAATGAGA...CAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGGGCCTGTCATTGGGCTaGCTTTCTTTCAGTCTATTC | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVGLSLG*LSFSLF Trigger: GAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCC...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGCGCCTTACCCCTATTTaGTTCTGTCTCAGTCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVRLTPI*FCLSQM Trigger: CATCTGACTGAGACAGAAGCAAATAGGGGTAAGGCG...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATAGAACAGTCCCTGTATaGTCCTCATTGGTGGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHRTVPV*SSLVAQ Trigger: CTGGGCCACCAATGAGGAGCATACAGGGACTGTTCT...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCATTACCAAGACGACCAGGCTGTCAAGTaGGGTCACTTAAACAATAGT | + |
|
Preference number: 2 (lower is better) Translates to: IFSQSVGCLLRVSFHYQDDQAVK*GHLNNS Trigger: ACTATTGTTTAAGTGACCCCACTTGACAGCCTGGTC...GTCTTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGGGAACATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCAGACCAGGCTGTCAAGTaGGGTCACTTAAACAATAGT | + |
|
Preference number: 2 (lower is better) Translates to: FREHFLPICRLPIEGVFSDQAVK*GHLNNS Trigger: ACTATTGTTTAAGTGACCCCACTTGACAGCCTGGTC...TGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTTCCCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGCCCTGTCCCTCCACTTaGAGCTCTGTCTATTTATTG | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVPCPST*SSVYLL Trigger: CAATAAATAGACAGAGCTCCAAGTGGAGGGACAGGG...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATTATGCTCCTCATTGGTaGCCCAGTCTCTGGAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHYAPHW*PSLWKL Trigger: GAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATA...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATCTGTATGCTCCTCATTaGTGGCCCAGTCTCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHLYAPH*WPSLWK Trigger: CTTCCAGAGACTGGGCCACCAATGAGGAGCATACAG...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTGCTATTTTAGTGTTCTaGGATCCTGATCATGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: PELTSLSWSMSDSCLKPIAILVF*DPDHEF Trigger: AAATTCATGATCAGGATCCCAGAACACTAAAATAGC...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGGAGGAACGACCAGTGTaGTTTACAGTGTTTGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVEERPV*FTVFVP Trigger: TGGTACAAACACTGTAAATCACACTGGTCGTTCCTC...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGGACCAGGCTGTCAAGTaGGGTCACTTAAACAATAGT | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVDQAVK*GHLNNS Trigger: ACTATTGTTTAAGTGACCCCACTTGACAGCCTGGTC...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR CAA 90 bp | ATTATACAAAGAGGAACCGCTCTTTTCACCAGCAGTGTTCAGATATaGTCTTATATCAACATACACAGGTCTTGTGCATGCTGTCACACA | + |
|
Preference number: 2 (lower is better) Translates to: IIQRGTALFTSSVQI*SYINIHRSCACCHT Trigger: TGTGTGACAGCATGCACAAGACCTGTGTATGTTGATATAAGACAATATCTGAACACTGCTGGTGAAAAGAGCGGTTCCTCTTTGTATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR CAA 90 bp | TCAGATGTAGGTAGGTTTAGGGAACATTTTCTCCCAATCTGTAGGTaGCCTATTGAGGGTGTCTTTTCATTACCAAGACTTTCAAGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SDVGRFREHFLPICR*PIEGVFSLPRLSSF Trigger: GAAACTTGAAAGTCTTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTTCCCTAAACCTACCTACATCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR CAA 90 bp | GGCCATGAAGCACAAGGCTGTGATCAGCCAGATGTCAATCAAAGGTaGAAAGTAAGTTACCTTCAAATAATTCTAAACACTAAAGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: GHEAQGCDQPDVNQR*KVSYLQIILNTKDL Trigger: CAGGTCTTTAGTGTTTAGAATTATTTGAAGGTAACTTACTTTCAACCTTTGATTGACATCTGGCTGATCACAGCCTTGTGCTTCATGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGACTATTGTATCTATGTaGCATCAGGCCATGAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVTIVSM*HQAMKH Trigger: GTGCTTCATGGCCTGATGTCACATAGATACAATAGT...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTAGGGAACATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCATACTCTTGGGTTTACTaGCTGTTACTGAATGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FREHFLPICRLPIEGVFSYSWVY*LLLNVL Trigger: AAGCACATTCAGTAACAGGCAGTAAACCCAAGAGTA...TGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTTCCCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATCAGGTAATGGACATCTaGGGTTTTCCAGCTTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHQVMDI*GFPASC Trigger: GCAAGAAGCTGGAAAACCCCAGATGTCCATTACCTG...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATTCCATTCATTTTTCCTaGCCATCTGGCCTTCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHSIHFS*PSGLLC Trigger: GCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGA...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATCCCTGTCCCTCCACTTaGAGCTCTGTCTATTTATTG | + |
|
Preference number: 2 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHPCPST*SSVYLL Trigger: CAATAAATAGACAGAGCTCCAAGTGGAGGGACAGGG...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGCAATTTAAGGAGCTATaGCCTAACTCATTACACCCT | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVQFKEL*PNSLHP Trigger: AGGGTGTAATGAGTTAGGTCATAGCTCCTTAAATTG...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGTACTCTTGGGTTTACTaGCTGTTACTGAATGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVYSWVY*LLLNVL Trigger: AAGCACATTCAGTAACAGGCAGTAAACCCAAGAGTA...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGGCATATGCTGTCACTTaGGTTTTTGATCTTAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVAYAVT*VFDLSH Trigger: ATGACTAAGATCAAAAACTCAAGTGACAGCATATGC...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATACTATTGTATCTATGTaGCATCAGGCCATGAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHTIVSM*HQAMKH Trigger: GTGCTTCATGGCCTGATGTCACATAGATACAATAGT...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGCTAACTGGTGTGAATTaGAATCTCAGGTCATTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVLTGVN*NLRSFD Trigger: ATCAAATGACCTGAGATTCCAATTCACACCAGTTAG...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGCTTAGTCATTCTAACTaGTGTGAATTGGAATCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GILIMNFKYLLISSVICVLSHSN*CELESQ Trigger: CTGAGATTCCAATTCACACCAGTTAGAATGACTAAG...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATCCCTTTCCACAATGTTaGGCATTTTGGTTAAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHPFPQC*AFWLRS Trigger: TGACCTTAACCAAAATGCCCAACATTGTGGAAAGGG...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 90 bp | AAATATCTAGAGAGATATGATTCCCTGGAATCAGTTTTTACTTCTTaGTATTTAATCAGCACAGGGTATGTGTGGGGGCTTTATCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KYLERYDSLESVFTS*YLISTGYVWGLYLS Trigger: AGAGAGATAAAGCCCCCACACATACCCTGTGCTGATTAAATACAAAGAAGTAAAAACTGATTCCAGGGAATCATATCTCTCTAGATATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 72 bp | CCAGGGGCCTCAGAACAGTCCCTGTATGCTCCTCATTaGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PGASEQSLYAPH*WPSLWKLPGVW Trigger: CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGACTGTTCTGAGGCCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 72 bp | GGGGCCTCAGAACAGTCCCTGTATGCTCCTCATTGGTaGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GASEQSLYAPHW*PSLWKLPGVWV Trigger: AACCCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGACTGTTCTGAGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGTGGTGTCCCCTCAAGTaGGCCTGTCATTGGGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLLPRGTSPITWVSPFPVWCPLK*ACHWAA Trigger: GGCAGCCCAATGACAGGCCAACTTGAGGGGACACCA...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR GCA 72 bp | CATCTTCTCCCACTGAGGCCAGAGCAGGCAGACCACTaGTACATATGTACCAGGGGCCTCAGAACAGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HLLPLRPEQADH*YICTRGLRTVP Trigger: AGGGACTGTTCTGAGGCCCCTGGTACATATGTAGCAGTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGACAGTGGGGCATCTTTaGGTCTTATACCCAAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWTVGHL*VLYPRV Trigger: CACTCTTGGGTATAAGACCAAAAGATGCCCCACTGT...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGACCCTTTCCACAATGTaGGGCATTTTGGTTAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWTLSTM*GILVKV Trigger: GACCTTAACCAAAATGCCCAACATTGTGGAAAGGGT...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTTGGTGTCCCCTCAAGTaGGCCTGTCATTGGGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PELTSLSWSMSDSCLKPIWCPLK*ACHWAA Trigger: GGCAGCCCAATGACAGGCCAACTTGAGGGGACACCA...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGGTTGCTCAATTACTCTaGGGTTTACTGCCTGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: PLLPRGTSPITWVSPFPVVAQLL*GLLPVT Trigger: AGTAACAGGCAGTAAACCCAAGAGTAATTGAGCAAC...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGGGAATCTCAGGTCATTaGATTTGCATTTCTCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWGISGH*ICISLM Trigger: CATCAGAGAAATGCAAATCAAATGACCTGAGATTCC...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGTTGAAGCATCCTCACTaGAGCCTTTCTGTTTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PLLPRGTSPITWVSPFPVLKHPH*SLSVCY Trigger: ATAACAAACAGAAAGGCTCAAGTGAGGATGCTTCAA...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTCCTGTATGCTCCTCATaGGTGGCCCAGTCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PELTSLSWSMSDSCLKPIPVCSS*VAQSLE Trigger: TTCCAGAGACTGGGCCACCAATGAGGAGCATACAGG...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGATCAAGATAAAGCTCATCTTCTCCCACTGAGGCCAGAGCAGGCAGACCACACAGTGGGGCATCTTTaGGTCTTATACCCAAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HDQDKAHLLPLRPEQADHTVGHL*VLYPRV Trigger: CACTCTTGGGTATAAGACCAAAAGATGCCCCACTGT...GTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATCTTGATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCTATACATTCCAGTCATaGTTCCCTCTCCTGGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPELTSLSWSMSDSCLKPYTFQS*FPLLVP Trigger: AGGGACCAGGAGAGGGAACAATGACTGGAATGTATA...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCCCTTATGAAGTGGGATaGAAGCATCCTCACTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCPYEVG*KHPHLS Trigger: GCTCAAGTGAGGATGCTTCAATCCCACTTCATAAGG...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCACCCTGTCCCTCCACTaGGAGCTCTGTCTATTTATT | + |
|
Preference number: 3 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCTLSLH*ELCLFI Trigger: AATAAATAGACAGAGCTCCAAGTGGAGGGACAGGGT...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR GCA 72 bp | GAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTaGCTGAAGCCCATTTCCTCATCCTTGGCCAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: ELTSLSWSMSDS*LKPISSSLANV Trigger: GACATTGGCCAAGGATGAGGAAATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCGTTGCTCAATTACTCTaGGGTTTACTGCCTGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: LPELTSLSWSMSDSCLKPVAQLL*GLLPVT Trigger: AGTAACAGGCAGTAAACCCAAGAGTAATTGAGCAAC...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCTCTGTAGGTTGCCTATaGAGGGTGTCTTTTCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: LPELTSLSWSMSDSCLKPSVGCL*RVSFHY Trigger: GTAATGAAAAGACACCCTCAATAGGCAACCTACAGA...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTACCCTGTCCCTCCACTaGGAGCTCTGTCTATTTATT | + |
|
Preference number: 3 (lower is better) Translates to: PELTSLSWSMSDSCLKPITLSLH*ELCLFI Trigger: AATAAATAGACAGAGCTCCAAGTGGAGGGACAGGGT...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTTCCATTCATTTTTCCTGGCCATCTGGCCTTCTCTGCTACACCCCTATACCCCTTATGAAGTGGGATaGAAGCATCCTCACTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: YFHSFFLAIWPSLLHPYTPYEVG*KHPHLS Trigger: GCTCAAGTGAGGATGCTTCAATCCCACTTCATAAGG...GGTATAGGGGTGTAGCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGACCCTTTCCACAATGTaGGGCATTTTGGTTAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LACHWAAFLSVYSPFLSLTLSTM*GILVKV Trigger: GACCTTAACCAAAATGCCCAACATTGTGGAAAGGGT...CAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTACCCTTTCCACAATGTaGGGCATTTTGGTTAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: PELTSLSWSMSDSCLKPITLSTM*GILVKV Trigger: GACCTTAACCAAAATGCCCAACATTGTGGAAAGGGT...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR TCA 72 bp | TCCATCATGATCAAGATAAAGCTCATCTTCTCCCACTaGGGCCAGAGCAGGCAGACCACTGCTACATATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SIMIKIKLIFSH*GQSRQTTATYV Trigger: TACATATGTAGCAGTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATCTTGATCATGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 72 bp | AATGTCAGATTCCTGCCTGAGCTTACTTCCTTGTCATaGTCAATGTCAGATTCCTGCCTGAAGCCCATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NVRFLPELTSLS*SMSDSCLKPIS Trigger: GGAAATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAGGAATCTGACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGCCTGTATGCTCCTCATaGGTGGCCCAGTCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GILIMNFKYLLISSVICVPVCSS*VAQSLE Trigger: TTCCAGAGACTGGGCCACCAATGAGGAGCATACAGG...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCTTGTTACTAGTCTGGTaGTTGAAAACTCCTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPELTSLSWSMSDSCLKPLLLVW*LKTPQN Trigger: ATTCTGAGGAGTTTTCAACAACCAGACTAGTAACAA...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCGAGTATTTGGAAAGCTaGAGATCTAGAATACACCTA | + |
|
Preference number: 3 (lower is better) Translates to: LPELTSLSWSMSDSCLKPEYLES*RSRIHL Trigger: TAGGTGTATTCTAGATCTCAAGCTTTCCAAATACTC...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR TCA 72 bp | CTCCATCTGACTCCCATGAATATTTTCTCCCCCTTATaGAGTGGGATTGAAGCATCCTCACTTGAGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LHLTPMNIFSPL*SGIEASSLEPF Trigger: GAAAGGCTCAAGTGAGGATGCTTCAATCCCACTTCATAAGGGGGAGAAAATATTCATGGGAGTCAGATGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 72 bp | ATTTTAACTGCGGATTGGTTACCCTGTCCCTCCACTTaGAGCTCTGTCTATTTATTGGAGGTAGACTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ILTADWLPCPST*SSVYLLEVDSE Trigger: CTCAGAGTCTACCTCCAATAAATAGACAGAGCTCCAAGTGGAGGGACAGGGTAACCAATCCGCAGTTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTTCCATTCATTTTTCCTGGCCATCTGGCCTTCTCTGCTACACCCCTATACCGTTGCTCAATTACTCTaGGGTTTACTGCCTGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: YFHSFFLAIWPSLLHPYTVAQLL*GLLPVT Trigger: AGTAACAGGCAGTAAACCCAAGAGTAATTGAGCAAC...GGTATAGGGGTGTAGCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTTTGAAGCATCCTCACTaGAGCCTTTCTGTTTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PELTSLSWSMSDSCLKPILKHPH*SLSVCY Trigger: ATAACAAACAGAAAGGCTCAAGTGAGGATGCTTCAA...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR TCA 72 bp | CACTTGGAGCTCTGTCTATTTATTGGAGGTAGACTCTaGGCACCCTTTCCACAATGTTGGGCATTTTGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HLELCLFIGGRL*APFPQCWAFWL Trigger: TAACCAAAATGCCCAACATTGTGGAAAGGGTGCTCAGAGTCTACCTCCAATAAATAGACAGAGCTCCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 72 bp | TTCTGCCCTAAGACCAGATTCTTACTTCCTTGTCCTTaGCCAATGTTAGGACTCTGCCTGGACTTACTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FCPKTRFLLPCP*PMLGLCLDLLF Trigger: AAAAAGTAAGTCCAGGCAGAGTCCTAACATTGGCCAAGGACAAGGAAGTAAGAATCTGGTCTTAGGGCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | TATTTCCATTCATTTTTCCTGGCCATCTGGCCTTCTCTGCTACACCCCTATACCGGAATCTCAGGTCATTaGATTTGCATTTCTCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: YFHSFFLAIWPSLLHPYTGISGH*ICISLM Trigger: CATCAGAGAAATGCAAATCAAATGACCTGAGATTCC...GGTATAGGGGTGTAGCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGCAAGTTGGCCTGTCATaGGGCTGCCTTTCTTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GILIMNFKYLLISSVICVQVGLS*GCLSFS Trigger: ACTGAAAGAAAGGCAGCCCAATGACAGGCCAACTTG...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR CCA 72 bp | TATGAACATAGCAGAACAAGTGTCCCTATGGTACAGTaGGGCATCTTTTGGTCTTATACCCAAGAGTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YEHSRTSVPMVQ*GIFWSYTQEWY Trigger: ATACCACTCTTGGGTATAAGACCAAAAGATGCCCCACTGTACCATAGGGACACTTGTTCTGCTATGTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGCCTTATGAAGTGGGATaGAAGCATCCTCACTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GILIMNFKYLLISSVICVPYEVG*KHPHLS Trigger: GCTCAAGTGAGGATGCTTCAATCCCACTTCATAAGG...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGACCCTTTCCACAATGTaGGGCATTTTGGTTAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GILIMNFKYLLISSVICVTLSTM*GILVKV Trigger: GACCTTAACCAAAATGCCCAACATTGTGGAAAGGGT...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATCAAGTTGGCCTGTCATaGGGCTGCCTTTCTTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHQVGLS*GCLSFS Trigger: ACTGAAAGAAAGGCAGCCCAATGACAGGCCAACTTG...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | AACATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCATTACCAAGTTGCTCAATTACTCTaGGGTTTACTGCCTGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: NIFSQSVGCLLRVSFHYQVAQLL*GLLPVT Trigger: AGTAACAGGCAGTAAACCCAAGAGTAATTGAGCAAC...TTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATACAGTGGGGCATCTTTaGGTCTTATACCCAAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHTVGHL*VLYPRV Trigger: CACTCTTGGGTATAAGACCAAAAGATGCCCCACTGT...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATACCCTGTCCCTCCACTaGGAGCTCTGTCTATTTATT | + |
|
Preference number: 3 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHTLSLH*ELCLFI Trigger: AATAAATAGACAGAGCTCCAAGTGGAGGGACAGGGT...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATTATACATTCCAGTCATaGTTCCCTCTCCTGGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHYTFQS*FPLLVP Trigger: AGGGACCAGGAGAGGGAACAATGACTGGAATGTATA...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR TCA 72 bp | TCTTTCTCCACATCCTTCCCAGCATATGCTGTCACTTaGGTTTTTGATCTTAGTCATTCTAACTGGTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SFSTSFPAYAVT*VFDLSHSNWCE Trigger: TTCACACCAGTTAGAATGACTAAGATCAAAAACTCAAGTGACAGCATATGCTGGGAAGGATGTGGAGAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR GCA 72 bp | GTAGGTTTAGGGAACATTTTCTCCCAATCTGTAGGTTaGCTATTGAGGGTGTCTTTTCATTACCAAGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: VGLGNIFSQSVG*LLRVSFHYQDF Trigger: AAAGTCTTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTTCCCTAAACCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 72 bp | GCATCTTTTGGTCTTATACCCAAGAGTGGTATAGCTTaGTCTTCAGGTAGAACTATTTCCAATTTTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASFGLIPKSGIA*SSGRTISNFLR Trigger: CCTCAGAAAATTGGAAATAGTTCTACCTGAAGACCAAGCTATACCACTCTTGGGTATAAGACCAAAAGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR TCA 72 bp | TATCAGTCAGTACATAGCACACATGTCTTTGGGGTCTaGGTTACCTCACTTAAGATGAAATTTTCTAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: YQSVHSTHVFGV*VTSLKMKFSSL Trigger: GAGACTAGAAAATTTCATCTTAAGTGAGGTAACTCAGACCCCAAAGACATGTGTGCTATGTACTGACTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 72 bp | GATCCCTGGCAGATCCATAGAGCTATTTTAGTGTTCTaGGATCCTGATCATGAATTTCAAGTATCTCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: DPWQIHRAILVF*DPDHEFQVSLN Trigger: ATTAAGAGATACTTGAAATTCATGATCAGGATCCCAGAACACTAAAATAGCTCTATGGATCTGCCAGGGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR-3UTR CAA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATGGAATCTCAGGTCATTaGATTTGCATTTCTCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHGISGH*ICISLM Trigger: CATCAGAGAAATGCAAATCAAATGACCTGAGATTCC...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CCA 72 bp | TTCCATAAAGTTTACTTTGTGTTGCTCAATTACTCTTaGGTTTACTGCCTGTTACTGAATGTGCTTAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FHKVYFVLLNYS*VYCLLLNVLSL Trigger: TAGACTAAGCACATTCAGTAACAGGCAGTAAACCCAAGAGTAATTGAGCAACACAAAGTAAACTTTATGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR TCA 72 bp | TTAAAGACATTGTCCATTTGTCAATTTAAGGAGCTATaGCCTAACTCATTACACCCTCAAGGAAAACTACTT | + |
|
Preference number: 3 (lower is better) Translates to: LKTLSICQFKEL*PNSLHPQGKLL Trigger: AAGTAGTTTTCCTTGAGGGTGTAATGAGTTAGGTCATAGCTCCTTAAATTGACAAATGGACAATGTCTTTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGTTTCAGCAGAGTTTCTaGTGGAGGCATGAATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWFQQSF*WRHECG Trigger: TCCACATTCATGCCTCCATCAGAAACTCTGCTGAAA...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | ATGTCAGATTCCTGCCTGAAGCCCATTTCCTCATCCTaGGCCAATGTCAGACTCCTGCCAAGTGGCACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSDSCLKPISSS*ANVRLLPSGTP Trigger: TGGGGTGCCACTTGGCAGGAGTCTGACATTGGCCAAGGATGAGGAAATGGGCTTCAGGCAGGAATCTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGGGGGCTAATGGTGATTaGTTGAAAGACACTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWGANGD*LKDTQE Trigger: TTCTTGAGTGTCTTTCAAGCAATCACCATTAGCCCC...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGGGGGCTAATGGTGATTaGTTGAAAGACACTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLPRGTSPITWVSPFPVGANGD*LKDTQE Trigger: TTCTTGAGTGTCTTTCAAGCAATCACCATTAGCCCC...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGTGGAAATTATTGCTGTaGTATTCATTACCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWWKLLL*YSLPTN Trigger: GTTGGTGGGTAATGAATATCACAGCAATAATTTCCA...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| 3UTR CAA 72 bp | TGGCCTAATGTCAGATTCCTGCCTGAGCTTACTTCCTaGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WPNVRFLPELTS*SWSMSDSCLKP Trigger: GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAGGAATCTGACATTAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR TCA 90 bp | CATGATCAAGATAAAGCTCATCTTCTCCCACTGAGGCCAGAGCAGGCAGACCACTTTCAGCAGAGTTTCTaGTGGAGGCATGAATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HDQDKAHLLPLRPEQADHFQQSF*WRHECG Trigger: TCCACATTCATGCCTCCATCAGAAACTCTGCTGAAA...GTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATCTTGATCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR GCA 90 bp | CATGATCAAGATAAAGCTCATCTTCTCCCACTGAGGCCAGAGCAGGCAGACCACGGGGCTAATGGTGATTaGTTGAAAGACACTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HDQDKAHLLPLRPEQADHGANGD*LKDTQE Trigger: TTCTTGAGTGTCTTTCAAGCAATCACCATTAGCCCC...GTGGTCTGCCTGCTCTGGCCTCAGTGGGAGAAGATGAGCTTTATCTTGATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGTTTCAGCAGAGTTTCTaGTGGAGGCATGAATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LACHWAAFLSVYSPFLSLFQQSF*WRHECG Trigger: TCCACATTCATGCCTCCATCAGAAACTCTGCTGAAA...CAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | TATCAGGTCTTGGTGTCCCCTCAAGTTGGCCTGTCATaGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YQVLVSPQVGLS*GCLSFSLFPIF Trigger: AAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAACTTGAGGGGACACCAAGACCTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR TCA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCTGGAAATTATTGCTGTaGTATTCATTACCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPELTSLSWSMSDSCLKPWKLLL*YSLPTN Trigger: GTTGGTGGGTAATGAATATCACAGCAATAATTTCCA...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTTCAAGATGTTGTGTGTaGCTCTGTTTTCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PELTSLSWSMSDSCLKPISRCCV*LCFQQS Trigger: ACTCTGCTGAAAACAGAGCCACACACAACATCTTGA...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | ATCAGTAATAGTATCAGGTCTTGGTGTCCCCTCAAGTaGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ISNSIRSWCPLK*ACHWAAFLSVY Trigger: ATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAACTTGAGGGGACACCAAGACCTGATACTATTACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | TTGGCCAATGTTAGGACTCTGCCTGGACTTACTTTTTaGTCATGGCCTAATGTCAGATTCCTGCCTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LANVRTLPGLTF*SWPNVRFLPEL Trigger: AAGCTCAGGCAGGAATCTGACATTAGGCCATGACAAAAAAGTAAGTCCAGGCAGAGTCCTAACATTGGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CCA 90 bp | TATTTCCATTCATTTTTCCTGGCCATCTGGCCTTCTCTGCTACACCCCTATACCTCAAGATGTTGTGTGTaGCTCTGTTTTCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YFHSFFLAIWPSLLHPYTSRCCV*LCFQQS Trigger: ACTCTGCTGAAAACAGAGCCACACACAACATCTTGA...GGTATAGGGGTGTAGCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTTGGAAATTATTGCTGTaGTATTCATTACCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PELTSLSWSMSDSCLKPIWKLLL*YSLPTN Trigger: GTTGGTGGGTAATGAATATCACAGCAATAATTTCCA...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | AGAGGAACCGCTCTTTTCACCAGCAGTGTTCAGATATaGTCTTATATCAACATACACAGGTCTTGTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RGTALFTSSVQI*SYINIHRSCAC Trigger: GCATGCACAAGACCTGTGTATGTTGATATAAGACAATATCTGAACACTGCTGGTGAAAAGAGCGGTTCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | GGTAGGTTTAGGGAACATTTTCTCCCAATCTGTAGGTaGCCTATTGAGGGTGTCTTTTCATTACCAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GRFREHFLPICR*PIEGVFSLPRL Trigger: AAGTCTTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTTCCCTAAACCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | TCTCCCCCTTATGAAGTGGGATTGAAGCATCCTCACTaGAGCCTTTCTGTTTGTTATACTTCTTACAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPYEVGLKHPH*SLSVCYTSYSL Trigger: CAAACTGTAAGAAGTATAACAAACAGAAAGGCTCAAGTGAGGATGCTTCAATCCCACTTCATAAGGGGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR TCA 90 bp | AACATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCATTACCAATTTCAGCAGAGTTTCTaGTGGAGGCATGAATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIFSQSVGCLLRVSFHYQFQQSF*WRHECG Trigger: TCCACATTCATGCCTCCATCAGAAACTCTGCTGAAA...TTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR GCA 90 bp | TTTAGGGAACATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCAGGGGCTAATGGTGATTaGTTGAAAGACACTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FREHFLPICRLPIEGVFSGANGD*LKDTQE Trigger: TTCTTGAGTGTCTTTCAAGCAATCACCATTAGCCCC...TGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTTCCCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CCA 90 bp | ATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCATTACCAAGACTCAAGATGTTGTGTGTaGCTCTGTTTTCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFSQSVGCLLRVSFHYQDSRCCV*LCFQQS Trigger: ACTCTGCTGAAAACAGAGCCACACACAACATCTTGA...GTCTTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR TCA 90 bp | TCTTTTCACCAGCAGTGTTCAGATATTGTCTTATATCAACATACACAGGTCTTGTTTCAGCAGAGTTTCTaGTGGAGGCATGAATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFHQQCSDIVLYQHTQVLFQQSF*WRHECG Trigger: TCCACATTCATGCCTCCATCAGAAACTCTGCTGAAA...CAAGACCTGTGTATGTTGATATAAGACAATATCTGAACACTGCTGGTGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR GCA 90 bp | TCTCAGCACAAGATTCTTCTGTTGTGGATTTTCTGTTTATCTCTGTACCCCATTGGGGCTAATGGTGATTaGTTGAAAGACACTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQHKILLLWIFCLSLYPIGANGD*LKDTQE Trigger: TTCTTGAGTGTCTTTCAAGCAATCACCATTAGCCCC...AATGGGGTACAGAGATAAACAGAAAATCCACAACAGAAGAATCTTGTGCTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CCA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGTCAAGATGTTGTGTGTaGCTCTGTTTTCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GILIMNFKYLLISSVICVSRCCV*LCFQQS Trigger: ACTCTGCTGAAAACAGAGCCACACACAACATCTTGA...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | CCACATCCTTCCCAGCATATGCTGTCACTTGAGTTTTaGATCTTAGTCATTCTAACTGGTGTGAATTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PHPSQHMLSLEF*ILVILTGVNWN Trigger: ATTCCAATTCACACCAGTTAGAATGACTAAGATCAAAAACTCAAGTGACAGCATATGCTGGGAAGGATGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | GAGAGATATGATTCCCTGGAATCAGTTTTTACTTCTTaGTATTTAATCAGCACAGGGTATGTGTGGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERYDSLESVFTS*YLISTGYVWGL Trigger: AAGCCCCCACACATACCCTGTGCTGATTAAATACAAAGAAGTAAAAACTGATTCCAGGGAATCATATCTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR TCA 90 bp | ATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCATTACCAAGACTGGAAATTATTGCTGTaGTATTCATTACCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IFSQSVGCLLRVSFHYQDWKLLL*YSLPTN Trigger: GTTGGTGGGTAATGAATATCACAGCAATAATTTCCA...GTCTTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CCA 90 bp | TCTTTTCACCAGCAGTGTTCAGATATTGTCTTATATCAACATACACAGGTCTTGTCAAGATGTTGTGTGTaGCTCTGTTTTCAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFHQQCSDIVLYQHTQVLSRCCV*LCFQQS Trigger: ACTCTGCTGAAAACAGAGCCACACACAACATCTTGA...CAAGACCTGTGTATGTTGATATAAGACAATATCTGAACACTGCTGGTGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | TTAGGGAACATTTTCTCCCAATCTGTAGGTTGCCTATaGAGGGTGTCTTTTCATTACCAAGACTTTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGNIFSQSVGCL*RVSFHYQDFQV Trigger: AACTTGAAAGTCTTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTTCCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | GCACAAGGCTGTGATCAGCCAGATGTCAATCAAAGGTaGAAAGTAAGTTACCTTCAAATAATTCTAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: AQGCDQPDVNQR*KVSYLQIILNT Trigger: AGTGTTTAGAATTATTTGAAGGTAACTTACTTTCAACCTTTGATTGACATCTGGCTGATCACAGCCTTGTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR TCA 90 bp | TCTTTTCACCAGCAGTGTTCAGATATTGTCTTATATCAACATACACAGGTCTTGTGGAAATTATTGCTGTaGTATTCATTACCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFHQQCSDIVLYQHTQVLWKLLL*YSLPTN Trigger: GTTGGTGGGTAATGAATATCACAGCAATAATTTCCA...CAAGACCTGTGTATGTTGATATAAGACAATATCTGAACACTGCTGGTGAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR TCA 90 bp | GCAATATACAGATTTAAATTTCACCAGTTGCAACCACATGTTTATAGCTCCCATTGGAAATTATTGCTGTaGTATTCATTACCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AIYRFKFHQLQPHVYSSHWKLLL*YSLPTN Trigger: GTTGGTGGGTAATGAATATCACAGCAATAATTTCCA...ATGGGAGCTATAAACATGTGGTTGCAACTGGTGAAATTTAAATCTGTATATTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| 3UTR CAA 72 bp | TTCTTTCACTATAAGTTCCATAAAGTTTACTTTGTGTaGCTCAATTACTCTTGGGTTTACTGCCTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: FFHYKFHKVYFV*LNYSWVYCLLL Trigger: CAGTAACAGGCAGTAAACCCAAGAGTAATTGAGCAACACAAAGTAAACTTTATGGAACTTATAGTGAAAGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGTATGCTCCTCATTGGTGGCCCAGTCTCTGGAAGCTCCCTGGGGTCTGGACCAGAGTCAAGATGTaGTGTGTGGCTCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLYAPHWWPSLWKLPGVWTRVKM*CVALFS Trigger: TGAAAACAGAGCCACACACAACATCTTGACTCTGGT...CCAGACCCCAGGGAGCTTCCAGAGACTGGGCCACCAATGAGGAGCATACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | CCCTTGCTTCCAAGGGGTACTTCCCCCATTACCTGGGTCTCACCCTTCCCTGTGACCAGAGTCAAGATGTaGTGTGTGGCTCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLPRGTSPITWVSPFPVTRVKM*CVALFS Trigger: TGAAAACAGAGCCACACACAACATCTTGACTCTGGT...CACAGGGAAGGGTGAGACCCAGGTAATGGGGGAAGTACCCCTTGGAAGCAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCACCAGAGTCAAGATGTaGTGTGTGGCTCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPELTSLSWSMSDSCLKPTRVKM*CVALFS Trigger: TGAAAACAGAGCCACACACAACATCTTGACTCTGGT...GGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCACCAGAGTCAAGATGTaGTGTGTGGCTCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCTRVKM*CVALFS Trigger: TGAAAACAGAGCCACACACAACATCTTGACTCTGGT...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS TCA 90 bp | CCAGAGTCAAGATGTTGTGTGTGGCTCTGTTTTCAGCAGAGTTTCTaGTGGAGGCATGAATGTGGAGAGTGTGTTGAACCCTCTTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PESRCCVWLCFQQSF*WRHECGECVEPSSY Trigger: ATAAGAAGAGGGTTCAACACACTCTCCACATTCATGCCTCCATCAGAAACTCTGCTGAAAACAGAGCCACACACAACATCTTGACTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000061756.4 ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCACTTCAGGGAGTCCTTaGGAAAGAATAGTTAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCTSGSP*ERIVKK Trigger: CTTCTTAACTATTCTTTCCAAAGGACTCCCTGAAGT...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGCGCTAATGGTGATTGCTaGAAAGACACTCAAGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: WPVIGLPFFQSIPHFCPCANGDC*KDTQET Trigger: TGTTTCTTGAGTGTCTTTCAAGCAATCACCATTAGC...GCAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR CAA 90 bp | TATTTCCATTCATTTTTCCTGGCCATCTGGCCTTCTCTGCTACACCCCTATACCACCAGAGTCAAGATGTaGTGTGTGGCTCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YFHSFFLAIWPSLLHPYTTRVKM*CVALFS Trigger: TGAAAACAGAGCCACACACAACATCTTGACTCTGGT...GGTATAGGGGTGTAGCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR CAA 90 bp | TTGGCCTGTCATTGGGCTGCCTTTCTTTCAGTCTATTCCCCATTTTTGTCCCTGACTTCAGGGAGTCCTTaGGAAAGAATAGTTAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LACHWAAFLSVYSPFLSLTSGSP*ERIVKK Trigger: CTTCTTAACTATTCTTTCCAAAGGACTCCCTGAAGT...CAGGGACAAAAATGGGGAATAGACTGAAAGAAAGGCAGCCCAATGACAGGCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
||
| CDS-3UTR CAA 90 bp | CCTGAGCTTACTTCCTTGTCATGGTCAATGTCAGATTCCTGCCTGAAGCCCATTGCTAATGGTGATTGCTaGAAAGACACTCAAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: PELTSLSWSMSDSCLKPIANGDC*KDTQET Trigger: TGTTTCTTGAGTGTCTTTCAAGCAATCACCATTAGC...AATGGGCTTCAGGCAGGAATCTGACATTGACCATGACAAGGAAGTAAGCTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | TATTTCCATTCATTTTTCCTGGCCATCTGGCCTTCTCTGCTACACCCCTATACCACTTCAGGGAGTCCTTaGGAAAGAATAGTTAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: YFHSFFLAIWPSLLHPYTTSGSP*ERIVKK Trigger: CTTCTTAACTATTCTTTCCAAAGGACTCCCTGAAGT...GGTATAGGGGTGTAGCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | TATTTCCATTCATTTTTCCTGGCCATCTGGCCTTCTCTGCTACACCCCTATACCGCTAATGGTGATTGCTaGAAAGACACTCAAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: YFHSFFLAIWPSLLHPYTANGDC*KDTQET Trigger: TGTTTCTTGAGTGTCTTTCAAGCAATCACCATTAGC...GGTATAGGGGTGTAGCAGAGAAGGCCAGATGGCCAGGAAAAATGAATGGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCATTACCAAGACACTTCAGGGAGTCCTTaGGAAAGAATAGTTAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: IFSQSVGCLLRVSFHYQDTSGSP*ERIVKK Trigger: CTTCTTAACTATTCTTTCCAAAGGACTCCCTGAAGT...GTCTTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | TTTAGGGAACATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCAACTTCAGGGAGTCCTTaGGAAAGAATAGTTAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: FREHFLPICRLPIEGVFSTSGSP*ERIVKK Trigger: CTTCTTAACTATTCTTTCCAAAGGACTCCCTGAAGT...TGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTTCCCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | AACATTTTCTCCCAATCTGTAGGTTGCCTATTGAGGGTGTCTTTTCATTACCAAGCTAATGGTGATTGCTaGAAAGACACTCAAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: NIFSQSVGCLLRVSFHYQANGDC*KDTQET Trigger: TGTTTCTTGAGTGTCTTTCAAGCAATCACCATTAGC...TTGGTAATGAAAAGACACCCTCAATAGGCAACCTACAGATTGGGAGAAAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | GGGATCCTGATCATGAATTTCAAGTATCTCTTAATTTCCAGTGTCATCTGTGTGGCTAATGGTGATTGCTaGAAAGACACTCAAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: GILIMNFKYLLISSVICVANGDC*KDTQET Trigger: TGTTTCTTGAGTGTCTTTCAAGCAATCACCATTAGC...CACACAGATGACACTGGAAATTAAGAGATACTTGAAATTCATGATCAGGATCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS-3UTR CAA 90 bp | TCTTTTCACCAGCAGTGTTCAGATATTGTCTTATATCAACATACACAGGTCTTGGCTAATGGTGATTGCTaGAAAGACACTCAAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: SFHQQCSDIVLYQHTQVLANGDC*KDTQET Trigger: TGTTTCTTGAGTGTCTTTCAAGCAATCACCATTAGC...CAAGACCTGTGTATGTTGATATAAGACAATATCTGAACACTGCTGGTGAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS TCA 72 bp | AGAAGAGAGACGTTTCCTAGAATACCAAGTGCCGTCTaGAGTGAGAGCACTATTCCAACTATCATGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RRETFPRIPSAV*SESTIPTIMVL Trigger: GAGGACCATGATAGTTGGAATAGTGCTCTCACTTCAGACGGCACTTGGTATTCTAGGAAACGTCTCTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000061756.4 ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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| CDS CAA 72 bp | CAGAGAGAAAAGAACAGGCCCATAAACTTTGTAGTTTaGGTTTTATATTCCTTCAAGCAGGAGTTCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QREKNRPINFVV*VLYSFKQEFLG Trigger: CCCCAGGAACTCCTGCTTGAAGGAATATAAAACCAAAACTACAAAGTTTATGGGCCTGTTCTTTTCTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000061756.4 ENSMUST00000232708.2 ENSMUST00000232818.2 ENSMUST00000233159.2 ENSMUST00000233722.2 ENSMUST00000233808.2 ENSMUST00000233959.2 |
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