Pregenerated sensors for VMN1R223 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069280Ensembl transcript IDs: ENSMUST00000091719.2, ENSMUST00000235331.2, ENSMUST00000236495.2, ENSMUST00000238002.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CACTTGCTCTCCTGCTCATTAGAACAGCCTCTGCTACATAGCAAGTaGTTTGTAAATAGAGGAGTTGGTGATCAAGGAAGTACATTAGAT | + |
Preference number: 1 (lower is better) Translates to: HLLSCSLEQPLLHSK*FVNRGVGDQGSTLD Trigger: ATCTAATGTACTTCCTTGATCACCAACTCCTCTATTTACAAAGCACTTGCTATGTAGCAGAGGCTGTTCTAATGAGCAGGAGAGCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 90 bp | CTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATaGTACAAAGCAAACATTGTGTTTCCCACCTCTAATATTCATGTA | + |
Preference number: 1 (lower is better) Translates to: LMQLKINLCNFQVSL*YKANIVFPTSNIHV Trigger: TACATGAATATTAGAGGTGGGAAACACAATGTTTGCTTTGTAGCATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 90 bp | TATTCCAAACTGCGATGGCATTGTCTAAAAGATGATATTTCTCCATaGTTCCCTATATATTTCACGACCACATATCAATGTTTTGATGTG | + |
Preference number: 1 (lower is better) Translates to: YSKLRWHCLKDDISP*FPIYFTTTYQCFDV Trigger: CACATCAAAACATTGATATGTGGTCGTGAAATATATAGGGAAGCATGGAGAAATATCATCTTTTAGACAATGCCATCGCAGTTTGGAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGGCGGAGAAACTGCAGTaGGCTGATGGGAAGCTTTGG | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQAEKLQ*ADGKLW Trigger: CCAAAGCTTCCCATCAGCTCACTGCAGTTTCTCCGC...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGTGCTTGCCCAGGCTGTaGCAACTGGGGTCTACTAAG | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQCLPRL*QLGSTK Trigger: CTTAGTAGACCCCAGTTGGCACAGCCTGGGCAAGCA...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGGTAAGCCCTAATGATTaGGAACCAGTAGCTGGGGCA | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQVSPND*EPVAGA Trigger: TGCCCCAGCTACTGGTTCTCAATCATTAGGGCTTAC...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGACTGTTGTCTTCACTTaGCCCTGCAAGCTCACCTCA | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQTVVFT*PCKLTS Trigger: TGAGGTGAGCTTGCAGGGCCAAGTGAAGACAACAGT...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGCTTCACTTGCTCTCCTaGTCATTAGAACAGCCTCTG | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQLHLLS*SLEQPL Trigger: CAGAGGCTGTTCTAATGAGCAGGAGAGCAAGTGAAG...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATAGTATGTGGCTGGCATaGAAGGGGCAAGGTGAGCTA | + |
Preference number: 2 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDSMWLA*KGQGEL Trigger: TAGCTCACCTTGCCCCTTGCATGCCAGCCACATACT...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCAGTCTTCACTTGGCCCTaGAAGCTCACCTCAGATAAG | + |
Preference number: 2 (lower is better) Translates to: GGALTQLRAVRSLPGMTAVFTWP*KLTSDK Trigger: CTTATCTGAGGTGAGCTTGCAGGGCCAAGTGAAGAC...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 90 bp | TCTGGACACTTTCTGGATCCTCCAGATTCTTTCAAACCTGAGGCCTaGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCCCAGGCTG | + |
Preference number: 2 (lower is better) Translates to: SGHFLDPPDSFKPEA*ELSGPPMSCCLPRL Trigger: CAGCCTGGGCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAGAATCTGGAGGATCCAGAAAGTGTCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGGGGGCACAATGCTCCTaGGGTGTTTTTATACATCAT | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQGAQCS*GVFIHH Trigger: ATGATGTATAAAAACACCTCAGGAGCATTGTGCCCC...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCATGCTTGGTACAGCAATaGCAAGCACTTAGTAGCTGC | + |
Preference number: 2 (lower is better) Translates to: GGALTQLRAVRSLPGMTACLVQQ*QALSSC Trigger: GCAGCTACTAAGTGCTTGGCATTGCTGTACCAAGCA...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATACTGTTGTCTTCACTTaGCCCTGCAAGCTCACCTCA | + |
Preference number: 2 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDTVVFT*PCKLTS Trigger: TGAGGTGAGCTTGCAGGGCCAAGTGAAGACAACAGT...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGGGTCTGGACACTTTCTaGATCCTCCAGATTCTTTCA | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQGLDTF*ILQILS Trigger: TGAAAGAATCTGGAGGATCCAGAAAGTGTCCAGACC...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCAGGGGCACAATGCTCCTaGGGTGTTTTTATACATCAT | + |
Preference number: 2 (lower is better) Translates to: GGALTQLRAVRSLPGMTAGAQCS*GVFIHH Trigger: ATGATGTATAAAAACACCTCAGGAGCATTGTGCCCC...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCATGCAGCAAGCTAAACTaGATGATAGGAATGGTGGGA | + |
Preference number: 2 (lower is better) Translates to: GGALTQLRAVRSLPGMTACSKLN*MIGMVG Trigger: TCCCACCATTCCTATCATGCAGTTTAGCTTGCTGCA...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATCTTCACTTGCTCTCCTaGTCATTAGAACAGCCTCTG | + |
Preference number: 2 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDLHLLS*SLEQPL Trigger: CAGAGGCTGTTCTAATGAGCAGGAGAGCAAGTGAAG...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCGTCTTCACTTGGCCCTaGAAGCTCACCTCAGATAAG | + |
Preference number: 2 (lower is better) Translates to: LSNLRPWSYQGLQCPAACVFTWP*KLTSDK Trigger: CTTATCTGAGGTGAGCTTGCAGGGCCAAGTGAAGAC...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGGGGCCTCCAATGTCCTaGTGCTTGCCCAGGCTGTGC | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGGPPMS*CLPRLC Trigger: GCACAGCCTGGGCAAGCAGCAGGACATTGGAGGCCC...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGGCATTGTCTAAAAGATaGTATTTCTCCATGCTTCCC | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQALSKR*YFSMLP Trigger: GGGAAGCATGGAGAAATATCATCTTTTAGACAATGC...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATCAGTATTTGGGGTGCTaGTGCAACTCAAGATCAACT | + |
Preference number: 2 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDQYLGC*CNSRST Trigger: AGTTGATCTTGAGTTGCATCAGCACCCCAAATACTG...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAGGGCCTCCAATGTCCTaGTGCTTGCCCAGGCTGTGC | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETAGPPMS*CLPRLC Trigger: GCACAGCCTGGGCAAGCAGCAGGACATTGGAGGCCC...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGATAAAGGATGCTTCCTaGCATTCCTCTTCTTCACTT | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQIKDAS*HSSSSL Trigger: AAGTGAAGAAGAGGAATGCCAGGAAGCATCCTTTAT...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGATTAGCTTCTCTCCCTaGTCATCTCCACTTTATAAG | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQISFSP*SSPLYK Trigger: CTTATAAAGTGGAGATGACCAGGGAGAGAAGCTAAT...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGACAGGGATTTTGGAATaGGAAGGTAGTAAGAATCCA | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQTGILE*EGSKNP Trigger: TGGATTCTTACTACCTTCCCATTCCAAAATCCCTGT...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCAAGATCTCAAGAACACTaGGATGTTCAGAACAGGTCA | + |
Preference number: 2 (lower is better) Translates to: GGALTQLRAVRSLPGMTARSQEH*DVQNRS Trigger: TGACCTGTTCTGAACATCCCAGTGTTCTTGAGATCT...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCGGGGCACAATGCTCCTaGGGTGTTTTTATACATCAT | + |
Preference number: 2 (lower is better) Translates to: LSNLRPWSYQGLQCPAACGAQCS*GVFIHH Trigger: ATGATGTATAAAAACACCTCAGGAGCATTGTGCCCC...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCAGGCAAATGGCAATTTaGTGGGGGAGGCTTGTTATT | + |
Preference number: 2 (lower is better) Translates to: LSNLRPWSYQGLQCPAACRQMAI*WGRLVI Trigger: AATAACAAGCCTCCCCCATCAAATTGCCATTTGCCT...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATTTCCAGGTCAGCCTATaGTACAAAGCAAACATTGTG | + |
Preference number: 2 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDFQVSL*YKANIV Trigger: CACAATGTTTGCTTTGTAGCATAGGCTGACCTGGAA...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCCTCAAGATCAACTTGTaGAACTTCCAGGTCAGCCTA | + |
Preference number: 2 (lower is better) Translates to: LSNLRPWSYQGLQCPAACLKINL*NFQVSL Trigger: TAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAG...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGAATCCACTTTCCACCTaGCTAGAAATCTTGAACAAA | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQNPLST*LEILNK Trigger: TTTGTTCAAGATTTCTAGGCAGGTGGAAAGTGGATT...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGCAATGTCCTGCTGCTTaGCCAGGCTGTGCCAACTGG | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGQCPAA*PGCANW Trigger: CCAGTTGGCACAGCCTGGGCAAGCAGCAGGACATTG...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGAAGACATTAAGAACATaGACATCTCTGCTGATCAGA | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQKTLRT*TSLLIR Trigger: TCTGATCAGCAGAGATGTCCATGTTCTTAATGTCTT...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATAGATCTCAAGAACACTaGGATGTTCAGAACAGGTCA | + |
Preference number: 2 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDRSQEH*DVQNRS Trigger: TGACCTGTTCTGAACATCCCAGTGTTCTTGAGATCT...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAGAAGCCTCCCTGGGATaGCTGCAGTGCAGTGTCTTG | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETAEASLG*LQCSVL Trigger: CAAGACACTGCACTGCAGTCATCCCAGGGAGGCTTC...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGGCGGAGAAACTGCAGTaGGCTGATGGGAAGCTTTGG | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGAEKLQ*ADGKLW Trigger: CCAAAGCTTCCCATCAGCTCACTGCAGTTTCTCCGC...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCCTACCTACCTTATCTTaGTTTCCAATATGGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: LSNLRPWSYQGLQCPAACLPTLS*FPIWLW Trigger: CCAGAGCCATATTGGAAAGCAAGATAAGGTAGGTAG...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCAAAGACATTAAGAACATaGACATCTCTGCTGATCAGA | + |
Preference number: 2 (lower is better) Translates to: GGALTQLRAVRSLPGMTAKTLRT*TSLLIR Trigger: TCTGATCAGCAGAGATGTCCATGTTCTTAATGTCTT...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGTCTTGCTTTCCAATATaGCTCTGGAGAAAAATGAAA | + |
Preference number: 2 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQSCFPI*LWRKMK Trigger: TTTCATTTTTCTCCAGAGCCATATTGGAAAGCAAGA...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | ACCAAGGCAAATGGCAATTTGATGGGGGAGGCTTGTTATTCCAGTATTTGGGGTGTAAGCCCTAATGATTaGGAACCAGTAGCTGGGGCA | + |
Preference number: 2 (lower is better) Translates to: TKANGNLMGEACYSSIWGVSPND*EPVAGA Trigger: TGCCCCAGCTACTGGTTCTCAATCATTAGGGCTTAC...ACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGTGCAGCAAGCTAAACTaGATGATAGGAATGGTGGGA | + |
Preference number: 2 (lower is better) Translates to: WGADATQDQLVQLPGQPMCSKLN*MIGMVG Trigger: TCCCACCATTCCTATCATGCAGTTTAGCTTGCTGCA...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR GCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGAGTATGTGGCTGGCATaGAAGGGGCAAGGTGAGCTA | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGSMWLA*KGQGEL Trigger: TAGCTCACCTTGCCCCTTGCATGCCAGCCACATACT...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR GCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTTGCTTGCCCAGGCTGTaGCAACTGGGGTCTACTAAG | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSCLPRL*QLGSTK Trigger: CTTAGTAGACCCCAGTTGGCACAGCCTGGGCAAGCA...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR CCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGCAGTTCTTTAGTGCTTaGTACAGCAATGCCAAGCAC | + |
Preference number: 2 (lower is better) Translates to: WGADATQDQLVQLPGQPMQFFSA*YSNAKH Trigger: GTGCTTGGCATTGCTGTACCAAGCACTAAAGAACTG...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTAGTCAGAAGCCTCCCTaGGATGACTGCAGTGCAGTG | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSSQKPP*DDCSAV Trigger: CACTGCACTGCAGTCATCCCAGGGAGGCTTCTGACT...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR CCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTGTGAACAGCCCTCCATaGCCCTGCATCCCTTTAGGA | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSVNSPP*PCIPLG Trigger: TCCTAAAGGGATGCAGGGCCATGGAGGGCTGTTCAC...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR TCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGGTATTTCCTGATGAATaGTGCAGCAAGCTAAACTGC | + |
Preference number: 2 (lower is better) Translates to: WGADATQDQLVQLPGQPMVFPDE*CSKLNC Trigger: GCAGTTTAGCTTGCTGCATCATTCATCAGGAAATAC...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR TCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTACTTTGCTGGGCCTTTaGGCCAGTGAACCTTACCAG | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSTLLGL*ASEPYQ Trigger: CTGGTAAGGTTCACTGGCTCAAAGGCCCAGCAAAGT...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR GCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGCTAATTCCAGTTGACTaGATGCTCTCCTGTATTTCC | + |
Preference number: 2 (lower is better) Translates to: WGADATQDQLVQLPGQPMLIPVD*MLSCIS Trigger: GGAAATACAGGAGAGCATGCAGTCAACTGGAATTAG...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR GCA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCCTGCTACATAGCAAGTaGTTTGTAAATAGAGGAGTT | + |
Preference number: 2 (lower is better) Translates to: LSNLRPWSYQGLQCPAACLLHSK*FVNRGV Trigger: AACTCCTCTATTTACAAAGCACTTGCTATGTAGCAG...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAAGTATGTGGCTGGCATaGAAGGGGCAAGGTGAGCTA | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETASMWLA*KGQGEL Trigger: TAGCTCACCTTGCCCCTTGCATGCCAGCCACATACT...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGACTGTTGTCTTCACTTaGCCCTGCAAGCTCACCTCA | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGTVVFT*PCKLTS Trigger: TGAGGTGAGCTTGCAGGGCCAAGTGAAGACAACAGT...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGCAGAGACGCACAGCCTaGCCTATCTCTTGGTTTAGT | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGQRRTA*PISWFS Trigger: ACTAAACCAAGAGATAGGCCAGGCTGTGCGTCTCTG...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 90 bp | ATTGATCAAATTTGCTTGGTTGTGGTGACTTTGTTAGTCTCACTGTaGTCTTCACTTGGCCCTGCAAGCTCACCTCAGATAAGGGCCATC | + |
Preference number: 2 (lower is better) Translates to: IDQICLVVVTLLVSL*SSLGPASSPQIRAI Trigger: GATGGCCCTTATCTGAGGTGAGCTTGCAGGGCCAAGTGAAGACAACAGTGAGACTAACAAAGTCACCACAACCAAGCAAATTTGATCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTGTAAGCCCTAATGATTaGGAACCAGTAGCTGGGGCA | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSVSPND*EPVAGA Trigger: TGCCCCAGCTACTGGTTCTCAATCATTAGGGCTTAC...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGCTTCACTTGCTCTCCTaGTCATTAGAACAGCCTCTG | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGLHLLS*SLEQPL Trigger: CAGAGGCTGTTCTAATGAGCAGGAGAGCAAGTGAAG...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAGTCTTCACTTGGCCCTaGAAGCTCACCTCAGATAAG | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETAVFTWP*KLTSDK Trigger: CTTATCTGAGGTGAGCTTGCAGGGCCAAGTGAAGAC...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGATAAAGGATGCTTCCTaGCATTCCTCTTCTTCACTT | + |
Preference number: 2 (lower is better) Translates to: WGADATQDQLVQLPGQPMIKDAS*HSSSSL Trigger: AAGTGAAGAAGAGGAATGCCAGGAAGCATCCTTTAT...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | ACCAAGGCAAATGGCAATTTGATGGGGGAGGCTTGTTATTCCAGTATTTGGGGTCAGTTCTTTAGTGCTTaGTACAGCAATGCCAAGCAC | + |
Preference number: 2 (lower is better) Translates to: TKANGNLMGEACYSSIWGQFFSA*YSNAKH Trigger: GTGCTTGGCATTGCTGTACCAAGCACTAAAGAACTG...ACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGCAGTATTTGGGGTGCTaGTGCAACTCAAGATCAACT | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGQYLGC*CNSRST Trigger: AGTTGATCTTGAGTTGCATCAGCACCCCAAATACTG...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGAGGCAAATGGCAATTTaGTGGGGGAGGCTTGTTATT | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGRQMAI*WGRLVI Trigger: AATAACAAGCCTCCCCCATCAAATTGCCATTTGCCT...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGAAGCTAAAAGCCACATaGCAGGGATTTTGGAATGGG | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGKLKAT*QGFWNG Trigger: CCCATTCCAAAATCCCTGTCATGTGGCTTTTAGCTT...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | ACCAAGGCAAATGGCAATTTGATGGGGGAGGCTTGTTATTCCAGTATTTGGGGTTTCCAGTTGACTGCATaGTCTCCTGTATTTCCTGAT | + |
Preference number: 2 (lower is better) Translates to: TKANGNLMGEACYSSIWGFQLTA*SPVFPD Trigger: ATCAGGAAATACAGGAGAGCATGCAGTCAACTGGAA...ACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGCTGCTACATAGCAAGTaGTTTGTAAATAGAGGAGTT | + |
Preference number: 2 (lower is better) Translates to: WGADATQDQLVQLPGQPMLLHSK*FVNRGV Trigger: AACTCCTCTATTTACAAAGCACTTGCTATGTAGCAG...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCATGCTTGGTACAGCAATaGCAAGCACTTAGTAGCTGC | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETACLVQQ*QALSSC Trigger: GCAGCTACTAAGTGCTTGGCATTGCTGTACCAAGCA...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | ACCAAGGCAAATGGCAATTTGATGGGGGAGGCTTGTTATTCCAGTATTTGGGGTTTCCAGGTCAGCCTATaGTACAAAGCAAACATTGTG | + |
Preference number: 2 (lower is better) Translates to: TKANGNLMGEACYSSIWGFQVSL*YKANIV Trigger: CACAATGTTTGCTTTGTAGCATAGGCTGACCTGGAA...ACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGAAGACATTAAGAACATaGACATCTCTGCTGATCAGA | + |
Preference number: 2 (lower is better) Translates to: WGADATQDQLVQLPGQPMKTLRT*TSLLIR Trigger: TCTGATCAGCAGAGATGTCCATGTTCTTAATGTCTT...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 90 bp | ACCAGTAGCTGGGGCACAATGCTCCTGAGGTGTTTTTATACATCATaGTGTACTGGAGTGAAGGTCTTAAGTAGAGCTTGTATTCCAAAC | + |
Preference number: 2 (lower is better) Translates to: TSSWGTMLLRCFYTS*CTGVKVLSRACIPN Trigger: GTTTGGAATACAAGCTCTACTTAAGACCTTCACTCCAGTACACAATGATGTATAAAAACACCTCAGGAGCATTGTGCCCCAGCTACTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGGTATTTCCTGATGAATaGTGCAGCAAGCTAAACTGC | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGVFPDE*CSKLNC Trigger: GCAGTTTAGCTTGCTGCATCATTCATCAGGAAATAC...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATACAGTATTTGGGGTGCTaGTGCAACTCAAGATCAACT | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDIQYLGC*CNSRST Trigger: AGTTGATCTTGAGTTGCATCAGCACCCCAAATACTG...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATAAGGCAAATGGCAATTTaGTGGGGGAGGCTTGTTATT | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDIRQMAI*WGRLVI Trigger: AATAACAAGCCTCCCCCATCAAATTGCCATTTGCCT...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAAAGCTAAAAGCCACATaGCAGGGATTTTGGAATGGG | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETAKLKAT*QGFWNG Trigger: CCCATTCCAAAATCCCTGTCATGTGGCTTTTAGCTT...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATAAAGCTAAAAGCCACATaGCAGGGATTTTGGAATGGG | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDIKLKAT*QGFWNG Trigger: CCCATTCCAAAATCCCTGTCATGTGGCTTTTAGCTT...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATATGCAGCAAGCTAAACTaGATGATAGGAATGGTGGGA | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDICSKLN*MIGMVG Trigger: TCCCACCATTCCTATCATGCAGTTTAGCTTGCTGCA...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGCTAATTCCAGTTGACTaGATGCTCTCCTGTATTTCC | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGLIPVD*MLSCIS Trigger: GGAAATACAGGAGAGCATGCAGTCAACTGGAATTAG...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGCTACCTACCTTATCTTaGTTTCCAATATGGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGLPTLS*FPIWLW Trigger: CCAGAGCCATATTGGAAAGCAAGATAAGGTAGGTAG...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTTTTTGCTGTTTATCCTaGGGAGAAACTGCAGTGAGC | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSFCCLS*GETAVS Trigger: GCTCACTGCAGTTTCTCCGCAGGATAAACAGCAAAA...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATACAGTTCTTTAGTGCTTaGTACAGCAATGCCAAGCAC | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDIQFFSA*YSNAKH Trigger: GTGCTTGGCATTGCTGTACCAAGCACTAAAGAACTG...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAGGTCTGGACACTTTCTaGATCCTCCAGATTCTTTCA | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETAGLDTF*ILQILS Trigger: TGAAAGAATCTGGAGGATCCAGAAAGTGTCCAGACC...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 90 bp | CAACACCAAACAATTATTGATCAAATTTGCTTGGTTGTGGTGACTTaGTTAGTCTCACTGTTGTCTTCACTTGGCCCTGCAAGCTCACCT | + |
Preference number: 2 (lower is better) Translates to: QHQTIIDQICLVVVT*LVSLLSSLGPASSP Trigger: AGGTGAGCTTGCAGGGCCAAGTGAAGACAACAGTGAGACTAACAAAGTCACCACAACCAAGCAAATTTGATCAATAATTGTTTGGTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATAGTATTTCCTGATGAATaGTGCAGCAAGCTAAACTGC | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDIVFPDE*CSKLNC Trigger: GCAGTTTAGCTTGCTGCATCATTCATCAGGAAATAC...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGGCATTGTCTAAAAGATaGTATTTCTCCATGCTTCCC | + |
Preference number: 2 (lower is better) Translates to: KESVPASATDQINSERQGALSKR*YFSMLP Trigger: GGGAAGCATGGAGAAATATCATCTTTTAGACAATGC...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR GCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATATTCCAGTTGACTGCATaGTCTCCTGTATTTCCTGAT | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDIFQLTA*SPVFPD Trigger: ATCAGGAAATACAGGAGAGCATGCAGTCAACTGGAA...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR GCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTCTAATTCCAGTTGACTaGATGCTCTCCTGTATTTCC | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSLIPVD*MLSCIS Trigger: GGAAATACAGGAGAGCATGCAGTCAACTGGAATTAG...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | ACCAAGGCAAATGGCAATTTGATGGGGGAGGCTTGTTATTCCAGTATTTGGGGTCTGCTACATAGCAAGTaGTTTGTAAATAGAGGAGTT | + |
Preference number: 2 (lower is better) Translates to: TKANGNLMGEACYSSIWGLLHSK*FVNRGV Trigger: AACTCCTCTATTTACAAAGCACTTGCTATGTAGCAG...ACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTCTACCTACCTTATCTTaGTTTCCAATATGGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSLPTLS*FPIWLW Trigger: CCAGAGCCATATTGGAAAGCAAGATAAGGTAGGTAG...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 90 bp | CTCACCTCAGATAAGGGCCATCTTCCCACCTCTACCTACCTTATCTaGCTTTCCAATATGGCTCTGGAGAAAAATGAAATACTAATTTCT | + |
Preference number: 2 (lower is better) Translates to: LTSDKGHLPTSTYLI*LSNMALEKNEILIS Trigger: AGAAATTAGTATTTCATTTTTCTCCAGAGCCATATTGGAAAGCAAGATAAGGTAGGTAGAGGTGGGAAGATGGCCCTTATCTGAGGTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTAATTCTAATTCCAGTTaGCTGCATGCTCTCCTGTAT | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSNSNSS*LHALLY Trigger: ATACAGGAGAGCATGCAGTCAACTGGAATTAGAATT...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATAAATTCTAATTCCAGTTaGCTGCATGCTCTCCTGTAT | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDINSNSS*LHALLY Trigger: ATACAGGAGAGCATGCAGTCAACTGGAATTAGAATT...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR TCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATAGCATTGTCTAAAAGATaGTATTTCTCCATGCTTCCC | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDIALSKR*YFSMLP Trigger: GGGAAGCATGGAGAAATATCATCTTTTAGACAATGC...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATAATAAAGGATGCTTCCTaGCATTCCTCTTCTTCACTT | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDIIKDAS*HSSSSL Trigger: AAGTGAAGAAGAGGAATGCCAGGAAGCATCCTTTAT...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATAATTAGCTTCTCTCCCTaGTCATCTCCACTTTATAAG | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDIISFSP*SSPLYK Trigger: CTTATAAAGTGGAGATGACCAGGGAGAGAAGCTAAT...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATAACAGGGATTTTGGAATaGGAAGGTAGTAAGAATCCA | + |
Preference number: 2 (lower is better) Translates to: VSELFTHLCASEALSPDITGILE*EGSKNP Trigger: TGGATTCTTACTACCTTCCCATTCCAAAATCCCTGT...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAACAGGGATTTTGGAATaGGAAGGTAGTAAGAATCCA | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETATGILE*EGSKNP Trigger: TGGATTCTTACTACCTTCCCATTCCAAAATCCCTGT...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR GCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAAATCCACTTTCCACCTaGCTAGAAATCTTGAACAAA | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETANPLST*LEILNK Trigger: TTTGTTCAAGATTTCTAGGCAGGTGGAAAGTGGATT...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCATCTTGCTTTCCAATATaGCTCTGGAGAAAAATGAAA | + |
Preference number: 2 (lower is better) Translates to: HSQQSLFEFCCLSCGETASCFPI*LWRKMK Trigger: TTTCATTTTTCTCCAGAGCCATATTGGAAAGCAAGA...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTTCTTGCTTTCCAATATaGCTCTGGAGAAAAATGAAA | + |
Preference number: 2 (lower is better) Translates to: EIFSVYWFMSLTPEISVSSCFPI*LWRKMK Trigger: TTTCATTTTTCTCCAGAGCCATATTGGAAAGCAAGA...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 72 bp | TCCCCTCAAGGCCCTCAGCACTGCAGTCCCCTTGTCTaGAGCTCAACAGGCTGCACCAGGGTGGCCTTAGGG | + |
Preference number: 3 (lower is better) Translates to: SPQGPQHCSPLV*SSTGCTRVALG Trigger: CCCTAAGGCCACCCTGGTGCAGCCTGTTGAGCTGCAGACAAGGGGACTGCAGTGCTGAGGGCCTTGAGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 72 bp | CCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTaGTGCTTGCCCAGGCTGTGCCAACTGGGGTCTACT | + |
Preference number: 3 (lower is better) Translates to: PEALELSGPPMS*CLPRLCQLGST Trigger: AGTAGACCCCAGTTGGCACAGCCTGGGCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGCACTGTTGTCTTCACTaGGCCCTGCAAGCTCACCTC | + |
Preference number: 3 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQHCCLH*ALQAHL Trigger: GAGGTGAGCTTGCAGGGCCAAGTGAAGACAACAGTG...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATAGCACTGCAGTCCCCTaGTCTGCAGCTCAACAGGCT | + |
Preference number: 3 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDSTAVP*SAAQQA Trigger: AGCCTGTTGAGCTGCAGACAAGGGGACTGCAGTGCT...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGTTCAAACCTGAGGCCTaGGAGTTATCAGGGCCTCCA | + |
Preference number: 3 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQFKPEA*ELSGPP Trigger: TGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAA...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 72 bp | CCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTaGCCAGGCTGTGCCAACTGGGGTCTACTAAGTGAT | + |
Preference number: 3 (lower is better) Translates to: PWSYQGLQCPAA*PGCANWGLLSD Trigger: ATCACTTAGTAGACCCCAGTTGGCACAGCCTGGGCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGTTGTTAGTCTCACTGTaGTCTTCACTTGGCCCTGCA | + |
Preference number: 3 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQLLVSL*SSLGPA Trigger: TGCAGGGCCAAGTGAAGACAACAGTGAGACTAACAA...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCATTTGATGGGGGAGGCTaGTTATTCCAGTATTTGGGG | + |
Preference number: 3 (lower is better) Translates to: GGALTQLRAVRSLPGMTAFDGGG*LFQYLG Trigger: CCCCAAATACTGGAATAACAAGCCTCCCCCATCAAA...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR TCA 72 bp | TTTTGCTGTTTATCCTGCGGAGAAACTGCAGTGAGCTaGTGGGAAGCTTTGGTGAACAGCCCTCCATGGCCC | + |
Preference number: 3 (lower is better) Translates to: FCCLSCGETAVS*WEALVNSPPWP Trigger: GGGCCATGGAGGGCTGTTCACCAAAGCTTCCCATCAGCTCACTGCAGTTTCTCCGCAGGATAAACAGCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR TCA 72 bp | GACGCACAGCCTGGCCTATCTCTTGGTTTAGTCTGCTaGGTTTTACTCTTGGACCAGGGAAGGAGTTCAGGC | + |
Preference number: 3 (lower is better) Translates to: DAQPGLSLGLVC*VLLLDQGRSSG Trigger: GCCTGAACTCCTTCCCTGGTCCAAGAGTAAAACTCAGCAGACTAAACCAAGAGATAGGCCAGGCTGTGCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CCA 72 bp | TGCAGTGTCTTGAGGATGCGGGGTCTGGACACTTTCTaGATCCTCCAGATTCTTTCAAACCTGAGGCCTTGG | + |
Preference number: 3 (lower is better) Translates to: CSVLRMRGLDTF*ILQILSNLRPW Trigger: CCAAGGCCTCAGGTTTGAAAGAATCTGGAGGATCCAGAAAGTGTCCAGACCCCGCATCCTCAAGACACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCAAAGGCAAATGGCAATTaGATGGGGGAGGCTTGTTAT | + |
Preference number: 3 (lower is better) Translates to: GGALTQLRAVRSLPGMTAKANGN*MGEACY Trigger: ATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTT...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATTTGTTAGTCTCACTGTaGTCTTCACTTGGCCCTGCA | + |
Preference number: 3 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDLLVSL*SSLGPA Trigger: TGCAGGGCCAAGTGAAGACAACAGTGAGACTAACAA...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCAATTCCTCTTCTTCACTaGCTCTCCTGCTCATTAGAA | + |
Preference number: 3 (lower is better) Translates to: GGALTQLRAVRSLPGMTAIPLLH*LSCSLE Trigger: TTCTAATGAGCAGGAGAGCAAGTGAAGAAGAGGAAT...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCTTGTTAGTCTCACTGTaGTCTTCACTTGGCCCTGCA | + |
Preference number: 3 (lower is better) Translates to: LSNLRPWSYQGLQCPAACLLVSL*SSLGPA Trigger: TGCAGGGCCAAGTGAAGACAACAGTGAGACTAACAA...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 72 bp | GACTTTGTTAGTCTCACTGTTGTCTTCACTTGGCCCTaGAAGCTCACCTCAGATAAGGGCCATCTTCCCACC | + |
Preference number: 3 (lower is better) Translates to: DFVSLTVVFTWP*KLTSDKGHLPT Trigger: GGTGGGAAGATGGCCCTTATCTGAGGTGAGCTTGCAGGGCCAAGTGAAGACAACAGTGAGACTAACAAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATATTCCTCTTCTTCACTaGCTCTCCTGCTCATTAGAA | + |
Preference number: 3 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDIPLLH*LSCSLE Trigger: TTCTAATGAGCAGGAGAGCAAGTGAAGAAGAGGAAT...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCAAGGCAAATGGCAATTaGATGGGGGAGGCTTGTTAT | + |
Preference number: 3 (lower is better) Translates to: LSNLRPWSYQGLQCPAACKANGN*MGEACY Trigger: ATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTT...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATTCTACCTACCTTATCTaGCTTTCCAATATGGCTCTG | + |
Preference number: 3 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDSTYLI*LSNMAL Trigger: CAGAGCCATATTGGAAAGCAAGATAAGGTAGGTAGA...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGAGCACTGCAGTCCCCTaGTCTGCAGCTCAACAGGCT | + |
Preference number: 3 (lower is better) Translates to: KESVPASATDQINSERQGSTAVP*SAAQQA Trigger: AGCCTGTTGAGCTGCAGACAAGGGGACTGCAGTGCT...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCACTGCAGTGCAGTGTCTaGAGGATGCGGGGTCTGGAC | + |
Preference number: 3 (lower is better) Translates to: HSQQSLFEFCCLSCGETALQCSV*RMRGLD Trigger: GTCCAGACCCCGCATCCTCAAGACACTGCACTGCAG...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR TCA 72 bp | TGGACACTTTCTGGATCCTCCAGATTCTTTCAAACCTaGGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTG | + |
Preference number: 3 (lower is better) Translates to: WTLSGSSRFFQT*GLGVIRASNVL Trigger: CAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAGAATCTGGAGGATCCAGAAAGTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CCA 72 bp | GCAGTATTTCAGAGACGCACAGCCTGGCCTATCTCTTaGTTTAGTCTGCTGAGTTTTACTCTTGGACCAGGG | + |
Preference number: 3 (lower is better) Translates to: AVFQRRTAWPIS*FSLLSFTLGPG Trigger: CCCTGGTCCAAGAGTAAAACTCAGCAGACTAAACCAAGAGATAGGCCAGGCTGTGCGTCTCTGAAATACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCACCACACCAGTTTTCTTaGATTTTGAAACTTAGCAAC | + |
Preference number: 3 (lower is better) Translates to: GGALTQLRAVRSLPGMTAPHQFS*ILKLSN Trigger: GTTGCTAAGTTTCAAAATCAAAGAAAACTGGTGTGG...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTAGCACTGCAGTCCCCTaGTCTGCAGCTCAACAGGCT | + |
Preference number: 3 (lower is better) Translates to: EIFSVYWFMSLTPEISVSSTAVP*SAAQQA Trigger: AGCCTGTTGAGCTGCAGACAAGGGGACTGCAGTGCT...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR TCA 72 bp | AGGATGCACAAGCATGAGGCAGGATGCTCTTCCCTCTaGCACACACCTTTAACTAGGGCTCTTACCATTAAG | + |
Preference number: 3 (lower is better) Translates to: RMHKHEAGCSSL*HTPLTRALTIK Trigger: CTTAATGGTAAGAGCCCTAGTTAAAGGTGTGTGTCAGAGGGAAGAGCATCCTGCCTCATGCTTGTGCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CCA 72 bp | TGTGGTGACTTTGTTAGTCTCACTGTTGTCTTCACTTaGCCCTGCAAGCTCACCTCAGATAAGGGCCATCTT | + |
Preference number: 3 (lower is better) Translates to: CGDFVSLTVVFT*PCKLTSDKGHL Trigger: AAGATGGCCCTTATCTGAGGTGAGCTTGCAGGGCCAAGTGAAGACAACAGTGAGACTAACAAAGTCACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGTTCAAACCTGAGGCCTaGGAGTTATCAGGGCCTCCA | + |
Preference number: 3 (lower is better) Translates to: KESVPASATDQINSERQGFKPEA*ELSGPP Trigger: TGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAA...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR TCA 72 bp | CATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATATaGTGGCGTCATTTGAGAGCCCGTTTGCTAGAGATT | + |
Preference number: 3 (lower is better) Translates to: HLCASEALSPDI*WRHLRARLLEI Trigger: AATCTCTAGCAAACGGGCTCTCAAATGACGCCATCATATGTCTGGAGACAAAGCCTCACTAGCACACAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 72 bp | GTATTTGGGGTGCTGATGCAACTCAAGATCAACTTGTaGAACTTCCAGGTCAGCCTATGCTACAAAGCAAAC | + |
Preference number: 3 (lower is better) Translates to: VFGVLMQLKINL*NFQVSLCYKAN Trigger: GTTTGCTTTGTAGCATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CCA 72 bp | GGCAATTTGATGGGGGAGGCTTGTTATTCCAGTATTTaGGGTGCTGATGCAACTCAAGATCAACTTGTGCAA | + |
Preference number: 3 (lower is better) Translates to: GNLMGEACYSSI*GADATQDQLVQ Trigger: TTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATATTTGATGGGGGAGGCTaGTTATTCCAGTATTTGGGG | + |
Preference number: 3 (lower is better) Translates to: VSELFTHLCASEALSPDIFDGGG*LFQYLG Trigger: CCCCAAATACTGGAATAACAAGCCTCCCCCATCAAA...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 72 bp | TCCTGCTCATTAGAACAGCCTCTGCTACATAGCAAGTaGTTTGTAAATAGAGGAGTTGGTGATCAAGGAAGT | + |
Preference number: 3 (lower is better) Translates to: SCSLEQPLLHSK*FVNRGVGDQGS Trigger: ACTTCCTTGATCACCAACTCCTCTATTTACAAAGCACTTGCTATGTAGCAGAGGCTGTTCTAATGAGCAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 72 bp | TCATCTCCACTTTATAAGAGACCTTCAGATAAAGGATaGTTCCTGGCATTCCTCTTCTTCACTTGCTCTCCT | + |
Preference number: 3 (lower is better) Translates to: SSPLYKRPSDKG*FLAFLFFTCSP Trigger: AGGAGAGCAAGTGAAGAAGAGGAATGCCAGGAAGCATCCTTTATCTGAAGGTCTCTTATAAAGTGGAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR GCA 72 bp | CTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATaGTACAAAGCAAACATTGTGTTTCCCACCTCTAAT | + |
Preference number: 3 (lower is better) Translates to: LKINLCNFQVSL*YKANIVFPTSN Trigger: ATTAGAGGTGGGAAACACAATGTTTGCTTTGTAGCATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTATTCCTCTTCTTCACTaGCTCTCCTGCTCATTAGAA | + |
Preference number: 3 (lower is better) Translates to: EIFSVYWFMSLTPEISVSIPLLH*LSCSLE Trigger: TTCTAATGAGCAGGAGAGCAAGTGAAGAAGAGGAAT...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR-3UTR CAA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCATCTACCTACCTTATCTaGCTTTCCAATATGGCTCTG | + |
Preference number: 3 (lower is better) Translates to: HSQQSLFEFCCLSCGETASTYLI*LSNMAL Trigger: CAGAGCCATATTGGAAAGCAAGATAAGGTAGGTAGA...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR CAA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGCTCAGCAAAGTCTATTaGAGTTTTGCTGTTTATCCT | + |
Preference number: 3 (lower is better) Translates to: KESVPASATDQINSERQGLSKVY*SFAVYP Trigger: AGGATAAACAGCAAAACTCAAATAGACTTTGCTGAG...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR-3UTR CAA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCACCACACCAGTTTTCTTaGATTTTGAAACTTAGCAAC | + |
Preference number: 3 (lower is better) Translates to: HSQQSLFEFCCLSCGETAPHQFS*ILKLSN Trigger: GTTGCTAAGTTTCAAAATCAAAGAAAACTGGTGTGG...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
3UTR TCA 72 bp | AGAATAGCTATACAATGTAATTCCTACACTTCTCAGTaGCCATGCAAGACATTAAGAACATGGACATCTCTG | + |
Preference number: 3 (lower is better) Translates to: RIAIQCNSYTSQ*PCKTLRTWTSL Trigger: CAGAGATGTCCATGTTCTTAATGTCTTGCATGGTCACTGAGAAGTGTAGGAATTACATTGTATAGCTATTCT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACAGGTGGTGCAGATaGAGAGGCCACGGGCAACCC | + |
Preference number: 4 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDDRWCR*RGHGQP Trigger: GGGTTGCCCGTGGCCTCTCCATCTGCACCACCTGTC...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCACAGGGCTTAGCATCATaGACATTCCCAGTGATCAGG | + |
Preference number: 4 (lower is better) Translates to: GGALTQLRAVRSLPGMTAQGLAS*TFPVIR Trigger: CCTGATCACTGGGAATGTCCATGATGCTAAGCCCTG...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGCAAATGGCAATTTGATGGGGGAGGCTTGTTATTCCAGTATTTGGGGTGACAGGTGGTGCAGATaGAGAGGCCACGGGCAACCC | + |
Preference number: 4 (lower is better) Translates to: TKANGNLMGEACYSSIWGDRWCR*RGHGQP Trigger: GGGTTGCCCGTGGCCTCTCCATCTGCACCACCTGTC...ACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATCAGCCCATGAGACCCTaGAAAATGACATCACGGAGA | + |
Preference number: 4 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDQPMRP*KMTSRR Trigger: TCTCCGTGATGTCATTTTCCAGGGTCTCATGGGCTG...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
||
CDS-3UTR TCA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCATGCTGTCTGTGGTTTaGGCTTTCTCCACAGTGTGG | + |
Preference number: 4 (lower is better) Translates to: LSNLRPWSYQGLQCPAACMLSVV*AFSTVW Trigger: CCACACTGTGGAGAAAGCTCAAACCACAGACAGCAT...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR GCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCAGGCAATAACATGCCATaGTGTCTGTGGTTTGAGCTT | + |
Preference number: 4 (lower is better) Translates to: GGALTQLRAVRSLPGMTAGNNMP*CLWFEL Trigger: AAGCTCAAACCACAGACAGCATGGCATGTTATTGCC...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATATGCCATGCTGTCTGTaGTTTGAGCTTTCTCCACAG | + |
Preference number: 4 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDMPCCL*FELSPQ Trigger: CTGTGGAGAAAGCTCAAACCACAGACAGCATGGCAT...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGAATTGTTTGCAGACCTaGAGCTGTAAAGATAGAGGA | + |
Preference number: 4 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQNCLQT*SCKDRG Trigger: TCCTCTATCTTTACAGCTCCAGGTCTGCAAACAATT...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR TCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCAAAGCTAGGAAAAACCTaGGAAACACAAGGAAGTAAG | + |
Preference number: 4 (lower is better) Translates to: GGALTQLRAVRSLPGMTAKLGKT*ETQGSK Trigger: CTTACTTCCTTGTGTTTCTCAGGTTTTTCCTAGCTT...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR GCA 90 bp | CTTTCAAACCTGAGGCCTTGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTGCGGCAATAACATGCCATaGTGTCTGTGGTTTGAGCTT | + |
Preference number: 4 (lower is better) Translates to: LSNLRPWSYQGLQCPAACGNNMP*CLWFEL Trigger: AAGCTCAAACCACAGACAGCATGGCATGTTATTGCC...GCAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGACCTGCTTTTATTCTTaGACCTTCTGTTCTTTGTTC | + |
Preference number: 4 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQTCFYS*TFCSLF Trigger: GAACAAAGAACAGAAGGTCCAAGAATAAAAGCAGGT...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 72 bp | TTTCTGGATCCTCCAGATTCTTTCAAACCTGAGGCCTaGGAGTTATCAGGGCCTCCAATGTCCTGCTGCTTG | + |
Preference number: 4 (lower is better) Translates to: FLDPPDSFKPEA*ELSGPPMSCCL Trigger: CAAGCAGCAGGACATTGGAGGCCCTGATAACTCCAAGGCCTCAGGTTTGAAAGAATCTGGAGGATCCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCAACCTGCTTTTATTCTTaGACCTTCTGTTCTTTGTTC | + |
Preference number: 4 (lower is better) Translates to: GGALTQLRAVRSLPGMTATCFYS*TFCSLF Trigger: GAACAAAGAACAGAAGGTCCAAGAATAAAAGCAGGT...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | GGGTCCCCTCCAGGCACAGCTCAGCTGCAGATAGCAATTCGACCTCACTCTCAGTCCAAATTATCTTCATaGCTAAAGCTAGGAAAAACC | + |
Preference number: 4 (lower is better) Translates to: GSPPGTAQLQIAIRPHSQSKLSS*LKLGKT Trigger: GGTTTTTCCTAGCTTTAGCCATGAAGATAATTTGGA...CTGAGAGTGAGGTCGAATTGCTATCTGCAGCTGAGCTGTGCCTGGAGGGGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGATGCCATGCTGTCTGTaGTTTGAGCTTTCTCCACAG | + |
Preference number: 4 (lower is better) Translates to: WGADATQDQLVQLPGQPMMPCCL*FELSPQ Trigger: CTGTGGAGAAAGCTCAAACCACAGACAGCATGGCAT...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR TCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGCATCACGGAGAGTCATaGGAGAGAGGAACAGCCACT | + |
Preference number: 4 (lower is better) Translates to: KESVPASATDQINSERQGHHGES*ERGTAT Trigger: AGTGGCTGTTCCTCTCTCTCATGACTCTCCGTGATG...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR GCA 90 bp | CCCTTTAGGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATTTGCTTACAGATACCTaGTTTTATTCTTGGACCTTC | + |
Preference number: 4 (lower is better) Translates to: PFRRGTHTTKSSQKPPWDLLTDT*FYSWTF Trigger: GAAGGTCCAAGAATAAAAGCAGGTATCTGTAAGCAA...ATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCCTAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR TCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCACATCACGGAGAGTCATaGGAGAGAGGAACAGCCACT | + |
Preference number: 4 (lower is better) Translates to: HSQQSLFEFCCLSCGETAHHGES*ERGTAT Trigger: AGTGGCTGTTCCTCTCTCTCATGACTCTCCGTGATG...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR TCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAATGCTGTCTGTGGTTTaGGCTTTCTCCACAGTGTGG | + |
Preference number: 4 (lower is better) Translates to: HSQQSLFEFCCLSCGETAMLSVV*AFSTVW Trigger: CCACACTGTGGAGAAAGCTCAAACCACAGACAGCAT...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCACAGCCCATGAGACCCTaGAAAATGACATCACGGAGA | + |
Preference number: 4 (lower is better) Translates to: HSQQSLFEFCCLSCGETAQPMRP*KMTSRR Trigger: TCTCCGTGATGTCATTTTCCAGGGTCTCATGGGCTG...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATACAGCCCATGAGACCCTaGAAAATGACATCACGGAGA | + |
Preference number: 4 (lower is better) Translates to: VSELFTHLCASEALSPDIQPMRP*KMTSRR Trigger: TCTCCGTGATGTCATTTTCCAGGGTCTCATGGGCTG...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGAATTGTTTGCAGACCTaGAGCTGTAAAGATAGAGGA | + |
Preference number: 4 (lower is better) Translates to: WGADATQDQLVQLPGQPMNCLQT*SCKDRG Trigger: TCCTCTATCTTTACAGCTCCAGGTCTGCAAACAATT...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATACAGGGCTTAGCATCATaGACATTCCCAGTGATCAGG | + |
Preference number: 4 (lower is better) Translates to: VSELFTHLCASEALSPDIQGLAS*TFPVIR Trigger: CCTGATCACTGGGAATGTCCATGATGCTAAGCCCTG...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTCAGGGCTTAGCATCATaGACATTCCCAGTGATCAGG | + |
Preference number: 4 (lower is better) Translates to: EIFSVYWFMSLTPEISVSQGLAS*TFPVIR Trigger: CCTGATCACTGGGAATGTCCATGATGCTAAGCCCTG...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 72 bp | ATTTGCTTGGTTGTGGTGACTTTGTTAGTCTCACTGTaGTCTTCACTTGGCCCTGCAAGCTCACCTCAGATA | + |
Preference number: 4 (lower is better) Translates to: ICLVVVTLLVSL*SSLGPASSPQI Trigger: TATCTGAGGTGAGCTTGCAGGGCCAAGTGAAGACAACAGTGAGACTAACAAAGTCACCACAACCAAGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 72 bp | TGCCTCAGTAGTCCCAATGGTTCTTCAGAAAACCCTTaGCTCTTAGCAAAAGAATCAGTCCCAGCATCAGCA | + |
Preference number: 4 (lower is better) Translates to: CLSSPNGSSENP*LLAKESVPASA Trigger: TGCTGATGCTGGGACTGATTCTTTTGCTAAGAGCAAAGGGTTTTCTGAAGAACCATTGGGACTACTGAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR GCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGTTGCTTACAGATACCTaGTTTTATTCTTGGACCTTC | + |
Preference number: 4 (lower is better) Translates to: WGADATQDQLVQLPGQPMLLTDT*FYSWTF Trigger: GAAGGTCCAAGAATAAAAGCAGGTATCTGTAAGCAA...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR GCA 90 bp | AAAGAATCAGTCCCAGCATCAGCAACAGATCAAATCAATTCAGAGAGACAGGGGGGCAATAACATGCCATaGTGTCTGTGGTTTGAGCTT | + |
Preference number: 4 (lower is better) Translates to: KESVPASATDQINSERQGGNNMP*CLWFEL Trigger: AAGCTCAAACCACAGACAGCATGGCATGTTATTGCC...CCCCTGTCTCTCTGAATTGATTTGATCTGTTGCTGATGCTGGGACTGATTCTTT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGACCTGCTTTTATTCTTaGACCTTCTGTTCTTTGTTC | + |
Preference number: 4 (lower is better) Translates to: WGADATQDQLVQLPGQPMTCFYS*TFCSLF Trigger: GAACAAAGAACAGAAGGTCCAAGAATAAAAGCAGGT...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGCAAATGGCAATTTGATGGGGGAGGCTTGTTATTCCAGTATTTGGGGTGGTAGCTCTGATTTCTaGCCTAGAATTGTTTGCAGA | + |
Preference number: 4 (lower is better) Translates to: TKANGNLMGEACYSSIWGGSSDF*PRIVCR Trigger: TCTGCAAACAATTCTAGGCCAGAAATCAGAGCTACC...ACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR TCA 90 bp | ACCAAGGCAAATGGCAATTTGATGGGGGAGGCTTGTTATTCCAGTATTTGGGGTAAGCTAGGAAAAACCTaGGAAACACAAGGAAGTAAG | + |
Preference number: 4 (lower is better) Translates to: TKANGNLMGEACYSSIWGKLGKT*ETQGSK Trigger: CTTACTTCCTTGTGTTTCTCAGGTTTTTCCTAGCTT...ACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 72 bp | TGGGGCACAATGCTCCTGAGGTGTTTTTATACATCATaGTGTACTGGAGTGAAGGTCTTAAGTAGAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: WGTMLLRCFYTS*CTGVKVLSRAC Trigger: ACAAGCTCTACTTAAGACCTTCACTCCAGTACACAATGATGTATAAAAACACCTCAGGAGCATTGTGCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 72 bp | GTTGCAATGCATTGTAATACCAAGGCAAATGGCAATTaGATGGGGGAGGCTTGTTATTCCAGTATTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: VAMHCNTKANGN*MGEACYSSIWG Trigger: ACCCCAAATACTGGAATAACAAGCCTCCCCCATCAAATTGCCATTTGCCTTGGTATTACAATGCATTGCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAGGTAGCTCTGATTTCTaGCCTAGAATTGTTTGCAGA | + |
Preference number: 4 (lower is better) Translates to: HSQQSLFEFCCLSCGETAGSSDF*PRIVCR Trigger: TCTGCAAACAATTCTAGGCCAGAAATCAGAGCTACC...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | GAGATATTCTCGGTGTACTGGTTCATGTCTTTAACCCCAGAAATCTCTGTGAGTGGTAGCTCTGATTTCTaGCCTAGAATTGTTTGCAGA | + |
Preference number: 4 (lower is better) Translates to: EIFSVYWFMSLTPEISVSGSSDF*PRIVCR Trigger: TCTGCAAACAATTCTAGGCCAGAAATCAGAGCTACC...ACTCACAGAGATTTCTGGGGTTAAAGACATGAACCAGTACACCGAGAATATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 72 bp | GATAAGGGCCATCTTCCCACCTCTACCTACCTTATCTaGCTTTCCAATATGGCTCTGGAGAAAAATGAAATA | + |
Preference number: 4 (lower is better) Translates to: DKGHLPTSTYLI*LSNMALEKNEI Trigger: TATTTCATTTTTCTCCAGAGCCATATTGGAAAGCAAGATAAGGTAGGTAGAGGTGGGAAGATGGCCCTTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR TCA 90 bp | GTCAGTGAGTTATTTACTCATCTGTGTGCTAGTGAGGCTTTGTCTCCAGACATAAAGCTAGGAAAAACCTaGGAAACACAAGGAAGTAAG | + |
Preference number: 4 (lower is better) Translates to: VSELFTHLCASEALSPDIKLGKT*ETQGSK Trigger: CTTACTTCCTTGTGTTTCTCAGGTTTTTCCTAGCTT...TATGTCTGGAGACAAAGCCTCACTAGCACACAGATGAGTAAATAACTCACTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCAAATTGTTTGCAGACCTaGAGCTGTAAAGATAGAGGA | + |
Preference number: 4 (lower is better) Translates to: HSQQSLFEFCCLSCGETANCLQT*SCKDRG Trigger: TCCTCTATCTTTACAGCTCCAGGTCTGCAAACAATT...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CCA 90 bp | CACTCTCAGCAAAGTCTATTTGAGTTTTGCTGTTTATCCTGCGGAGAAACTGCATCCAAATTATCTTCATaGCTAAAGCTAGGAAAAACC | + |
Preference number: 4 (lower is better) Translates to: HSQQSLFEFCCLSCGETASKLSS*LKLGKT Trigger: GGTTTTTCCTAGCTTTAGCCATGAAGATAATTTGGA...TGCAGTTTCTCCGCAGGATAAACAGCAAAACTCAAATAGACTTTGCTGAGAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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3UTR CAA 72 bp | ATTTCCCCACAGCATCCACACCAGTTTTCTTTGATTTaGAAACTTAGCAACACCAAACAATTATTGATCAAA | + |
Preference number: 4 (lower is better) Translates to: ISPQHPHQFSLI*KLSNTKQLLIK Trigger: TTTGATCAATAATTGTTTGGTGTTGCTAAGTTTCAAAATCAAAGAAAACTGGTGTGGATGCTGTGGGGAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CAA 90 bp | GGAGGGGCACTCACACAACTAAGAGCAGTCAGAAGCCTCCCTGGGATGACTGCACATGCTGTCTGTGGTTaGAGCTTTCTCCACAGTGTG | + |
Preference number: 5 (lower is better) Translates to: GGALTQLRAVRSLPGMTAHAVCG*SFLHSV Trigger: CACACTGTGGAGAAAGCTCAAACCACAGACAGCATG...TGCAGTCATCCCAGGGAGGCTTCTGACTGCTCTTAGTTGTGTGAGTGCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS-3UTR CAA 90 bp | TGGGGTGCTGATGCAACTCAAGATCAACTTGTGCAACTTCCAGGTCAGCCTATGCATGCTGTCTGTGGTTaGAGCTTTCTCCACAGTGTG | + |
Preference number: 5 (lower is better) Translates to: WGADATQDQLVQLPGQPMHAVCG*SFLHSV Trigger: CACACTGTGGAGAAAGCTCAAACCACAGACAGCATG...CATAGGCTGACCTGGAAGTTGCACAAGTTGATCTTGAGTTGCATCAGCACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS CCA 72 bp | GAGGAGGAGAAAGGCAATAACATGCCATGCTGTCTGTaGTTTGAGCTTTCTCCACAGTGTGGTCCTGGGACT | + |
Preference number: 6 (lower is better) Translates to: EEEKGNNMPCCL*FELSPQCGPGT Trigger: AGTCCCAGGACCACACTGTGGAGAAAGCTCAAACCACAGACAGCATGGCATGTTATTGCCTTTCTCCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091719.2 ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS GCA 72 bp | CCTCTGGGTAGCTCTGATTTCTGGCCTAGAATTGTTTaGAGACCTGGAGCTGTAAAGATAGAGGACACGCTT | + |
Preference number: 6 (lower is better) Translates to: PLGSSDFWPRIV*RPGAVKIEDTL Trigger: AAGCGTGTCCTCTATCTTTACAGCTCCAGGTCTGCAAACAATTCTAGGCCAGAAATCAGAGCTACCCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091719.2 ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |
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CDS TCA 72 bp | TCCAAATTATCTTCATGGCTAAAGCTAGGAAAAACCTaGGAAACACAAGGAAGTAAGCATGATCTAGTTCAT | + |
Preference number: 6 (lower is better) Translates to: SKLSSWLKLGKT*ETQGSKHDLVH Trigger: ATGAACTAGATCATGCTTACTTCCTTGTGTTTCTCAGGTTTTTCCTAGCTTTAGCCATGAAGATAATTTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000091719.2 ENSMUST00000235331.2 ENSMUST00000236495.2 ENSMUST00000238002.2 |