Pregenerated sensors for VMN1R221 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000082316Ensembl transcript IDs: ENSMUST00000122275.3, ENSMUST00000236177.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGTGAGCATCTCAGCATGCCTGTGGAGATCAGAGGACAGCATGTaGGGGTCAGTTTTCTTCTTTAGAGACAGATCAGGCTGTCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: HVSISACLWRSEDSM*GSVFFFRDRSGCLG Trigger: ACCCAGACAGCCTGATCTGTCTCTAAAGAAGAAAACTGACCCCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGATGCTCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR CCA 90 bp | GTATGTCCCTGCGTGTGTGTCCATGTGAGCATCTCAGCATGCCTGTaGAGATCAGAGGACAGCATGTGGGGGTCAGTTTTCTTCTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: VCPCVCVHVSISACL*RSEDSMWGSVFFFR Trigger: TCTAAAGAAGAAAACTGACCCCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGATGCTCACATGGACACACACGCAGGGACATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 90 bp | CTTGCACAGATCTCTACTTCCTTACCCAACTCCCACATCATAGGATaGATGACAGCTTGTAGCTCTAGCTCCTTGGGACCTAAAACTCTC | + |
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Preference number: 1 (lower is better) Translates to: LAQISTSLPNSHIIG*MTACSSSSLGPKTL Trigger: GAGAGTTTTAGGTCCCAAGGAGCTAGAGCTACAAGCTGTCATGCATCCTATGATGTGGGAGTTGGGTAAGGAAGTAGAGATCTGTGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 90 bp | GTTTTCTTCTTTAGAGACAGATCAGGCTGTCTGGGTGTCAGCAGGTaGTTTTACCCACTGAGTCATCTCTCCAGTCTGCTGTCTATTCCT | + |
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Preference number: 1 (lower is better) Translates to: VFFFRDRSGCLGVSR*FYPLSHLSSLLSIP Trigger: AGGAATAGACAGCAGACTGGAGAGATGACTCAGTGGGTAAAAGCACCTGCTGACACCCAGACAGCCTGATCTGTCTCTAAAGAAGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 90 bp | AACAAGACAATGAGGAGGAGGGATAGTGAAGAGACCTGCTTCTCTTaGACAGATCTCTACTTCCTTACCCAACTCCCACATCATAGGATG | + |
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Preference number: 1 (lower is better) Translates to: NKTMRRRDSEETCFS*TDLYFLTQLPHHRM Trigger: CATCCTATGATGTGGGAGTTGGGTAAGGAAGTAGAGATCTGTGCAAGAGAAGCAGGTCTCTTCACTATCCCTCCTCCTCATTGTCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR TCA 90 bp | AATTACTTTAAAGTTTATTTGTATGTCCCTGCGTGTGTGTCCATGTaGGCATCTCAGCATGCCTGTGGAGATCAGAGGACAGCATGTGGG | + |
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Preference number: 1 (lower is better) Translates to: NYFKVYLYVPACVSM*ASQHACGDQRTACG Trigger: CCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGATGCTCACATGGACACACACGCAGGGACATACAAATAAACTTTAAAGTAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 90 bp | ACTTACATCAACAAGACAATGAGGAGGAGGGATAGTGAAGAGACCTaGTTCTCTTGCACAGATCTCTACTTCCTTACCCAACTCCCACAT | + |
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Preference number: 1 (lower is better) Translates to: TYINKTMRRRDSEET*FSCTDLYFLTQLPH Trigger: ATGTGGGAGTTGGGTAAGGAAGTAGAGATCTGTGCAAGAGAAGCAGGTCTCTTCACTATCCCTCCTCCTCATTGTCTTGTTGATGTAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 90 bp | CTGTTGACTGTAAAGCTTGAATTTCTGTTTCTCAGAGGTGGGATGTaGCCTACCCCCACAACCATGAAGCATTCTGTAACAAATGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LLTVKLEFLFLRGGM*PTPTTMKHSVTNVL Trigger: CAGAACATTTGTTACAGAATGCTTCATGGTTGTGGGGGTAGGGCACATCCCACCTCTGAGAAACAGAAATTCAAGCTTTACAGTCAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 90 bp | CAGGATCTACAGGCAAAGGGCATGCACATATTTCATAATTATAAATaGAGGCAAACACACACACACACACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: QDLQAKGMHIFHNYK*RQTHTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCCTGCATTTATAATTATGAAATATGTGCATGCCCTTTGCCTGTAGATCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR CCA 90 bp | TGTGATTTTGCTATATACAAGAGGTATGGAAAATTGGCTGAAGGATaGTCTCATGAACTCCACCTTAGGAGGAGACTGCCACCAATTTGG | + |
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Preference number: 1 (lower is better) Translates to: CDFAIYKRYGKLAEG*SHELHLRRRLPPIW Trigger: CCAAATTGGTGGCAGTCTCCTCCTAAGGTGGAGTTCATGAGACCATCCTTCAGCCAATTTTCCATACCTCTTGTATATAGCAAAATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR CCA 90 bp | CCATCATTTGTACCTGCTGGTAAAGGGAAGATCTATTTTCTTCTTTaGGACGACATGGGGTATGTCAGCCACTTTAAGGTGATTCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: PSFVPAGKGKIYFLL*DDMGYVSHFKVILV Trigger: CACAAGAATCACCTTAAAGTGGCTGACATACCCCATGTCGTCCCAAAGAAGAAAATAGATCTTCCCTTTACCAGCAGGTACAAATGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR CCA 90 bp | ACCATACATTGGATCAGAACAATCTGTGTAACTTCAGTCAATCACTaGATGTCCAGGATCTACAGGCAAAGGGCATGCACATATTTCATA | + |
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Preference number: 1 (lower is better) Translates to: TIHWIRTICVTSVNH*MSRIYRQRACTYFI Trigger: TATGAAATATGTGCATGCCCTTTGCCTGTAGATCCTGGACATCCAGTGATTGACTGAAGTTACACAGATTGTTCTGATCCAATGTATGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 90 bp | ATTGTTTTTATAGCTTTGCCAGATGTTCCAGTCTTCACTTCTTCCTaGCATAGCTGCATATTATTTTGGGACATACATAGAAGGCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: IVFIALPDVPVFTSS*HSCILFWDIHRRQN Trigger: ATTCTGCCTTCTATGTATGTCCCAAAATAATATGCAGCTATGGCAGGAAGAAGTGAAGACTGGAACATCTGGCAAAGCTATAAAAACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTGAGCATCTCAGCATGCCTGTGGAGATCAGAGGACAGCATGTGGGGGTCAACAGATCAGGCTGTCTaGGTGTCAGCAGGTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: HVSISACLWRSEDSMWGSTDQAV*VSAGAF Trigger: AAAAGCACCTGCTGACACCCAGACAGCCTGATCTGT...TGACCCCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGATGCTCACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGCAGCTGCAAACCAGGCTTGCTCGGCTTCAGTCACACTCATCGAATCAGTTGCTTTGAGTCACACATaGCTGAGGATAACCACATGC | + |
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Preference number: 2 (lower is better) Translates to: RAAANQACSASVTLIESVALSHT*LRITTC Trigger: GCATGTGGTTATCCTCAGTCATGTGTGACTCAAAGC...AACTGATTCGATGAGTGTGACTGAAGCCGAGCAAGCCTGGTTTGCAGCTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAGATCTCTACTTCCTTACCCAACTCCCACATCATAGGATGCATGACAGCTTGTACTATGGTGGTGTaGCTGCACTGTGCTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: AQISTSLPNSHIIGCMTACTMVV*LHCAVE Trigger: CTCCACAGCACAGTGCAGCCACACCACCATAGTACA...AGCTGTCATGCATCCTATGATGTGGGAGTTGGGTAAGGAAGTAGAGATCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTGAGCATCTCAGCATGCCTGTGGAGATCAGAGGACAGCATGTGGGGGTCAGTAGCTCTAGCTCCTTaGGACCTAAAACTCTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: HVSISACLWRSEDSMWGSVALAP*DLKLSL Trigger: TAAAGAGAGTTTTAGGTCCCAAGGAGCTAGAGCTAC...TGACCCCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGATGCTCACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR TCA 90 bp | AATAGAGGTAGTTACAGCAGATGGGGACAAGGAAAGAGACCCACAGCCAGACATAATTGGGTGGGTAGGTaGAGAACCAGCCTGATTCCT | + |
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Preference number: 2 (lower is better) Translates to: NRGSYSRWGQGKRPTARHNWVGR*RTSLIP Trigger: AGGAATCAGGCTGGTTCTTCACCTACCCACCCAATT...ATGTCTGGCTGTGGGTCTCTTTCCTTGTCCCCATCTGCTGTAACTACCTCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAGATCTCTACTTCCTTACCCAACTCCCACATCATAGGATGCATGACAGCTCTTAGGAGCATTGTCTaGTGTTCCAGAGAAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AQISTSLPNSHIIGCMTALRSIV*CSREAR Trigger: CCTGGCTTCTCTGGAACACCAGACAATGCTCCTAAG...AGCTGTCATGCATCCTATGATGTGGGAGTTGGGTAAGGAAGTAGAGATCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGAAAGAGACCCACAGCCAGACATTGAAAAGTACTATAAGCCTTGGAGCATCTGTTTCTCAGAGGTaGGATGTGCCCTACCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TRKETHSQTLKSTISLGASVSQR*DVPYPH Trigger: GTGGGGGTAGGGCACATCCCACCTCTGAGAAACAGA...TGCTCCAAGGCTTATAGTACTTTTCAATGTCTGGCTGTGGGTCTCTTTCCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR GCA 90 bp | CATGTGAGCATCTCAGCATGCCTGTGGAGATCAGAGGACAGCATGTGGGGGTCAGTATTTTTCAGAATGTaGCCATCAGATTCTTCGAAC | + |
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Preference number: 2 (lower is better) Translates to: HVSISACLWRSEDSMWGSVFFRM*PSDSSN Trigger: GTTCGAAGAATCTGATGGGCACATTCTGAAAAATAC...TGACCCCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGATGCTCACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR CAA 90 bp | CAGGTGAGAAGCCAGAGCAGGATGTGGATGCTGTGTTATTCAGCCTaGCAGAGAGCTCTATACAAGGTCATTTTCCAAATAAGGCTAACG | + |
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Preference number: 2 (lower is better) Translates to: QVRSQSRMWMLCYSA*QRALYKVIFQIRLT Trigger: CGTTAGCCTTATTTGGAAAATGACCTTGTATAGAGCTCTCTGCAAGGCTGAATAACACAGCATCCACATCCTGCTCTGGCTTCTCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTATTCAGGTATTCAGGGACACTCTGCCAATAAAGTCAGGCAGAGAAAGGGAGAACAAGTGGTTCTCTaGCTCTTGTGTCTTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LYSGIQGHSANKVRQRKGEQVVL*LLCLPL Trigger: CAAGGGAAGACACAAGAGTCAGAGAACCACTTGTTC...TCCCTTTCTCTGCCTGACTTTATTGGCAGAGTGTCCCTGAATACCTGAATACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | AATAGAGGTAGTTACAGCAGATGGGGACAAGGAAAGAGACCCACAGCCAGACATCTCTTTAGGACTGTATaGGCATCTGTTCACATGTGG | + |
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Preference number: 2 (lower is better) Translates to: NRGSYSRWGQGKRPTARHLFRTV*ASVHMW Trigger: CCACATGTGAACAGATGCCCATACAGTCCTAAAGAG...ATGTCTGGCTGTGGGTCTCTTTCCTTGTCCCCATCTGCTGTAACTACCTCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATTAGTATATTGCCCAATTGGTCCATCCTAGTAGCATGCAATGTGTTCAGAGTGAGCATCTCAGCATaGCTGTGGAGATCAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LISILPNWSILVACNVFRVSISA*LWRSED Trigger: GTCCTCTGATCTCCACAGGCATGCTGAGATGCTCAC...TCTGAACACATTGCATGCTACTAGGATGGACCAATTGGGCAATATACTAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTATTCAGGTATTCAGGGACACTCTGCCAATAAAGTCAGGCAGAGAAAGGGATTATTTGTATGTCCCTaGGTGTGTGTCCATGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LYSGIQGHSANKVRQRKGLFVCP*VCVHVS Trigger: GCTCACATGGACACACACGCAGGGACATACAAATAA...TCCCTTTCTCTGCCTGACTTTATTGGCAGAGTGTCCCTGAATACCTGAATACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGCTGCAAACCAGGCTTGCTCGGCTTCAGTCACACTCATCGAATCAGTTCTCAAGAGTGGCAAATaGAGAATGAGATTTCTATAT | + |
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Preference number: 2 (lower is better) Translates to: RAAANQACSASVTLIESVLKSGK*RMRFLY Trigger: ATATAGAAATCTCATTCTCCATTTGCCACTCTTGAG...AACTGATTCGATGAGTGTGACTGAAGCCGAGCAAGCCTGGTTTGCAGCTGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAACCAGCCATGTAATCAGAAATTACCAGGCAGAGTTCACGAATAGAGGTACTTCAGTCAATCACTaGATGTCCAGGATCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: GGTSHVIRNYQAEFTNRGTSVNH*MSRIYR Trigger: CCTGTAGATCCTGGACATCCAGTGATTGACTGAAGT...ACCTCTATTCGTGAACTCTGCCTGGTAATTTCTGATTACATGGCTGGTTCCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR TCA 90 bp | AATAGAGGTAGTTACAGCAGATGGGGACAAGGAAAGAGACCCACAGCCAGACATAATCCATGCAATCCTTaGTCATGCTGTGTCAACAAT | + |
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Preference number: 2 (lower is better) Translates to: NRGSYSRWGQGKRPTARHNPCNP*SCCVNN Trigger: ATTGTTGACACAGCATGATCAAGGATTGCATGGATT...ATGTCTGGCTGTGGGTCTCTTTCCTTGTCCCCATCTGCTGTAACTACCTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTATTCAGGTATTCAGGGACACTCTGCCAATAAAGTCAGGCAGAGAAAGGGAGCAACCACACTTGCCTaGAAAGATCTCACAATTTGT | + |
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Preference number: 2 (lower is better) Translates to: LYSGIQGHSANKVRQRKGATTLA*KDLTIC Trigger: ACAAATTGTGAGATCTTTTCAGGCAAGTGTGGTTGC...TCCCTTTCTCTGCCTGACTTTATTGGCAGAGTGTCCCTGAATACCTGAATACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGAAAGAGACCCACAGCCAGACATTGAAAAGTACTATAAGCCTTGGAGCAGAGACCTGCTTCTCTTaGACAGATCTCTACTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: TRKETHSQTLKSTISLGAETCFS*TDLYFL Trigger: AAGGAAGTAGAGATCTGTGCAAGAGAAGCAGGTCTC...TGCTCCAAGGCTTATAGTACTTTTCAATGTCTGGCTGTGGGTCTCTTTCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGAAAGAGACCCACAGCCAGACATTGAAAAGTACTATAAGCCTTGGAGCATTCTTTGGGACGACATaGGGTATGTCAGCCACTTTA | + |
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Preference number: 2 (lower is better) Translates to: TRKETHSQTLKSTISLGAFFGTT*GMSATL Trigger: TAAAGTGGCTGACATACCCCATGTCGTCCCAAAGAA...TGCTCCAAGGCTTATAGTACTTTTCAATGTCTGGCTGTGGGTCTCTTTCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTATTCAGGTATTCAGGGACACTCTGCCAATAAAGTCAGGCAGAGAAAGGGAAAGTGTGTGAACAAGTaGTTCTCTGACTCTTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: LYSGIQGHSANKVRQRKGKCVNK*FSDSCV Trigger: GACACAAGAGTCAGAGAACCACTTGTTCACACACTT...TCCCTTTCTCTGCCTGACTTTATTGGCAGAGTGTCCCTGAATACCTGAATACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | AACCATGAAGCATTCTGTAACAAATGTTCTGGGAAGATTTCCTTAACGGCTTTGATCTCAGCATGCCTGTaGAGATCAGAGGACAGCATG | + |
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Preference number: 2 (lower is better) Translates to: NHEAFCNKCSGKISLTALISACL*RSEDSM Trigger: CATGCTGTCCTCTGATCTCCACAGGCATGCTGAGAT...CAAAGCCGTTAAGGAAATCTTCCCAGAACATTTGTTACAGAATGCTTCATGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAACCAGCCATGTAATCAGAAATTACCAGGCAGAGTTCACGAATAGAGGTATCTATTTTCTTCTTTaGGACGACATGGGGTATGTC | + |
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Preference number: 2 (lower is better) Translates to: GGTSHVIRNYQAEFTNRGIYFLL*DDMGYV Trigger: GACATACCCCATGTCGTCCCAAAGAAGAAAATAGAT...ACCTCTATTCGTGAACTCTGCCTGGTAATTTCTGATTACATGGCTGGTTCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATGACAGCTTGTAGCTCTAGCTCCTTGGGACCTAAAACTCTCTTTAGGACTGTGGCAAATGGAGAATaGGATTTCTATATCACTGTA | + |
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Preference number: 2 (lower is better) Translates to: CMTACSSSSLGPKTLFRTVANGE*DFYITV Trigger: TACAGTGATATAGAAATCTCATTCTCCATTTGCCAC...AGTCCTAAAGAGAGTTTTAGGTCCCAAGGAGCTAGAGCTACAAGCTGTCATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATGACAGCTTGTAGCTCTAGCTCCTTGGGACCTAAAACTCTCTTTAGGACTTACTTACAGACACATTaGAGTTTTCCAAGATATCCC | + |
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Preference number: 2 (lower is better) Translates to: CMTACSSSSLGPKTLFRTYLQTH*SFPRYP Trigger: GGGATATCTTGGAAAACTTCAATGTGTCTGTAAGTA...AGTCCTAAAGAGAGTTTTAGGTCCCAAGGAGCTAGAGCTACAAGCTGTCATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR CAA 90 bp | TCTGGTGTTCCAGAGAAGCCAGGTTTAATTTCTACCAACCATACATaGGATCAGAACAATCTGTGTAACTTCAGTCAATCACTGGATGTC | + |
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Preference number: 2 (lower is better) Translates to: SGVPEKPGLISTNHT*DQNNLCNFSQSLDV Trigger: GACATCCAGTGATTGACTGAAGTTACACAGATTGTTCTGATCCAATGTATGGTTGGTAGAAATTAAACCTGGCTTCTCTGGAACACCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATTAGTATATTGCCCAATTGGTCCATCCTAGTAGCATGCAATGTGTTCAGATTGTCTGGTTCTTTGTaGCAGACATTTAGAAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LISILPNWSILVACNVFRLSGSL*QTFRKG Trigger: CCCTTTTCTAAATGTCTGGCACAAAGAACCAGACAA...TCTGAACACATTGCATGCTACTAGGATGGACCAATTGGGCAATATACTAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR-3UTR CCA 90 bp | AACCATGAAGCATTCTGTAACAAATGTTCTGGGAAGATTTCCTTAACGGCTTTGGATTTACATGAGCAATaGATGTTACCTACAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: NHEAFCNKCSGKISLTALDLHEQ*MLPTDK Trigger: CTTGTCTGTAGGTAACATCCATTGCTCATGTAAATC...CAAAGCCGTTAAGGAAATCTTCCCAGAACATTTGTTACAGAATGCTTCATGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR CAA 90 bp | CATATGGTATTTGTTTACATGCAGTTGACTTACCTCATTAGTATATaGCCCAATTGGTCCATCCTAGTAGCATGCAATGTGTTCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: HMVFVYMQLTYLISI*PNWSILVACNVFRI Trigger: TATTCTGAACACATTGCATGCTACTAGGATGGACCAATTGGGCAATATACTAATGAGGTAAGTCAACTGCATGTAAACAAATACCATATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 72 bp | TGTCCCTGCGTGTGTGTCCATGTGAGCATCTCAGCATaGCTGTGGAGATCAGAGGACAGCATGTGGGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: CPCVCVHVSISA*LWRSEDSMWGS Trigger: TGACCCCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGATGCTCACATGGACACACACGCAGGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 72 bp | CCTAGCTCAGAGAGCCATTCTGAGGGCATAGGGGACTaGAATCTTAGTAGCAGGGTCCTCCAACAGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: PSSESHSEGIGD*NLSSRVLQQAT Trigger: TGTAGCCTGTTGGAGGACCCTGCTACTAAGATTGCAGTCCCCTATGCCCTCAGAATGGCTCTCTGAGCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR CCA 72 bp | TGCGTGTGTGTCCATGTGAGCATCTCAGCATGCCTGTaGAGATCAGAGGACAGCATGTGGGGGTCAGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: CVCVHVSISACL*RSEDSMWGSVF Trigger: GAAAACTGACCCCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGATGCTCACATGGACACACACGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR TCA 72 bp | CAGGCTGTCTGGGTGTCAGCAGGTGCTTTTACCCACTaGGTCATCTCTCCAGTCTGCTGTCTATTCCTAATG | + |
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Preference number: 3 (lower is better) Translates to: QAVWVSAGAFTH*VISPVCCLFLM Trigger: CATTAGGAATAGACAGCAGACTGGAGAGATGACTCAGTGGGTAAAAGCACCTGCTGACACCCAGACAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR CCA 72 bp | ATCTCAGCATGCCTGTGGAGATCAGAGGACAGCATGTaGGGGTCAGTTTTCTTCTTTAGAGACAGATCAGGC | + |
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Preference number: 3 (lower is better) Translates to: ISACLWRSEDSM*GSVFFFRDRSG Trigger: GCCTGATCTGTCTCTAAAGAAGAAAACTGACCCCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
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| 3UTR GCA 72 bp | ATCTCTACTTCCTTACCCAACTCCCACATCATAGGATaGATGACAGCTTGTAGCTCTAGCTCCTTGGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: ISTSLPNSHIIG*MTACSSSSLGP Trigger: AGGTCCCAAGGAGCTAGAGCTACAAGCTGTCATGCATCCTATGATGTGGGAGTTGGGTAAGGAAGTAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR GCA 72 bp | ATGAGGAGGAGGGATAGTGAAGAGACCTGCTTCTCTTaGACAGATCTCTACTTCCTTACCCAACTCCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: MRRRDSEETCFS*TDLYFLTQLPH Trigger: ATGTGGGAGTTGGGTAAGGAAGTAGAGATCTGTGCAAGAGAAGCAGGTCTCTTCACTATCCCTCCTCCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGAGCATCTCAGCATGCCTGTGGAGATCAGAGGACAGCATGTGGGGGTCAGATTTGTCTGGTTCTTaGTGCCAGACATTTAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HVSISACLWRSEDSMWGSDLSGS*CQTFRK Trigger: TTTTCTAAATGTCTGGCACAAAGAACCAGACAAATC...TGACCCCCACATGCTGTCCTCTGATCTCCACAGGCATGCTGAGATGCTCACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR GCA 72 bp | AACAAGACAATGAGGAGGAGGGATAGTGAAGAGACCTaGTTCTCTTGCACAGATCTCTACTTCCTTACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: NKTMRRRDSEET*FSCTDLYFLTQ Trigger: TTGGGTAAGGAAGTAGAGATCTGTGCAAGAGAAGCAGGTCTCTTCACTATCCCTCCTCCTCATTGTCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR GCA 72 bp | GTAAAGCTTGAATTTCTGTTTCTCAGAGGTGGGATGTaGCCTACCCCCACAACCATGAAGCATTCTGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: VKLEFLFLRGGM*PTPTTMKHSVT Trigger: TGTTACAGAATGCTTCATGGTTGTGGGGGTAGGGCACATCCCACCTCTGAGAAACAGAAATTCAAGCTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CCA 72 bp | GCTATATACAAGAGGTATGGAAAATTGGCTGAAGGATaGTCTCATGAACTCCACCTTAGGAGGAGACTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AIYKRYGKLAEG*SHELHLRRRLP Trigger: TGGCAGTCTCCTCCTAAGGTGGAGTTCATGAGACCATCCTTCAGCCAATTTTCCATACCTCTTGTATATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CCA 72 bp | GTACCTGCTGGTAAAGGGAAGATCTATTTTCTTCTTTaGGACGACATGGGGTATGTCAGCCACTTTAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPAGKGKIYFLL*DDMGYVSHFKV Trigger: CACCTTAAAGTGGCTGACATACCCCATGTCGTCCCAAAGAAGAAAATAGATCTTCCCTTTACCAGCAGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTATTCAGGTATTCAGGGACACTCTGCCAATAAAGTCAGGCAGAGAAAGGGACAGCCTGATTCCTTTTaGTTCCTGGGAACCATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LYSGIQGHSANKVRQRKGQPDSF*FLGTIL Trigger: TAAAATGGTTCCCAGGAACAAAAAGGAATCAGGCTG...TCCCTTTCTCTGCCTGACTTTATTGGCAGAGTGTCCCTGAATACCTGAATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR TCA 72 bp | ACCTACAGACAAGTCACACTTACATCAACAAGACAATaGGGAGGAGGGATAGTGAAGAGACCTGCTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TYRQVTLTSTRQ*GGGIVKRPASL Trigger: AAGAGAAGCAGGTCTCTTCACTATCCCTCCTCCTCATTGTCTTGTTGATGTAAGTGTGACTTGTCTGTAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CCA 72 bp | AGCTCCTTGGGACCTAAAACTCTCTTTAGGACTGTATaGGCATCTGTTCACATGTGGTATACATTCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: SSLGPKTLFRTV*ASVHMWYTFTQ Trigger: CTGTGTGAATGTATACCACATGTGAACAGATGCCCATACAGTCCTAAAGAGAGTTTTAGGTCCCAAGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGAAAGAGACCCACAGCCAGACATTGAAAAGTACTATAAGCCTTGGAGCAAAGAGGTATGGAAAATaGGCTGAAGGATGGTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TRKETHSQTLKSTISLGAKRYGK*AEGWSH Trigger: ATGAGACCATCCTTCAGCCAATTTTCCATACCTCTT...TGCTCCAAGGCTTATAGTACTTTTCAATGTCTGGCTGTGGGTCTCTTTCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGAAAGAGACCCACAGCCAGACATTGAAAAGTACTATAAGCCTTGGAGCAGATCTATTTTCTTCTTaGGGACGACATGGGGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: TRKETHSQTLKSTISLGADLFSS*GRHGVC Trigger: ACATACCCCATGTCGTCCCAAAGAAGAAAATAGATC...TGCTCCAAGGCTTATAGTACTTTTCAATGTCTGGCTGTGGGTCTCTTTCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR TCA 72 bp | AAAAGTACTATAAGCCTTGGAGCAGTCAGCCTTAAATaGGATGTCTCCATCAAATCCCTCCCAACAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KSTISLGAVSLK*DVSIKSLPTEL Trigger: AAGCTCTGTTGGGAGGGATTTGATGGAGACATCTCATTTAAGGCTGACTGCTCCAAGGCTTATAGTACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR TCA 72 bp | TGGATAATTGGTCATAACATCTGTTTACCATGCAGGTaGGAAGCCAGAGCAGGATGTGGATGCTGTGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: WIIGHNICLPCR*EARAGCGCCVI Trigger: AATAACACAGCATCCACATCCTGCTCTGGCTTCTCACCTGCATGGTAAACAGATGTTATGACCAATTATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CCA 72 bp | CATGATCCAGGGCATTTAAATTCCTGTCTGGTGCACTaGGCTCCTACTGACTTAATTCACAGTACATATCAT | + |
|
Preference number: 3 (lower is better) Translates to: HDPGHLNSCLVH*APTDLIHSTYH Trigger: ATGATATGTACTGTGAATTAAGTCAGTAGGAGCCCAGTGCACCAGACAGGAATTTAAATGCCCTGGATCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CCA 72 bp | TCTCTGAGTAGCCACAGCTTCATATTTCTGATTACATaGAGGAACCAGCCATGTAATCAGAAATTACCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSSHSFIFLIT*RNQPCNQKLPG Trigger: GCCTGGTAATTTCTGATTACATGGCTGGTTCCTCCATGTAATCAGAAATATGAAGCTGTGGCTACTCAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR GCA 72 bp | CCAGATGTTCCAGTCTTCACTTCTTCCTGCCATAGCTaGATATTATTTTGGGACATACATAGAAGGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PDVPVFTSSCHS*ILFWDIHRRQN Trigger: ATTCTGCCTTCTATGTATGTCCCAAAATAATATGCAGCTATGGCAGGAAGAAGTGAAGACTGGAACATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR GCA 72 bp | ATAGCTTTGCCAGATGTTCCAGTCTTCACTTCTTCCTaGCATAGCTGCATATTATTTTGGGACATACATAGA | + |
|
Preference number: 3 (lower is better) Translates to: IALPDVPVFTSS*HSCILFWDIHR Trigger: TCTATGTATGTCCCAAAATAATATGCAGCTATGGCAGGAAGAAGTGAAGACTGGAACATCTGGCAAAGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTAGTATATTGCCCAATTGGTCCATCCTAGTAGCATGCAATGTGTTCAGATACTTTAAAGTTTATTaGTATGTCCCTGCGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LISILPNWSILVACNVFRYFKVY*YVPACV Trigger: CACACACGCAGGGACATACAAATAAACTTTAAAGTA...TCTGAACACATTGCATGCTACTAGGATGGACCAATTGGGCAATATACTAATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR TCA 72 bp | ATACATGGGGTCTGCATAGCTTTGTACCAGGTCTTCTaGGTTTACATTATAGCTTCCAGTTTAGTGTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: IHGVCIALYQVF*VYIIASSLVCL Trigger: TAAACACACTAAACTGGAAGCTATAATGTAAACTCAGAAGACCTGGTACAAAGCTATGCAGACCCCATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CCA 72 bp | ATTAACATAGGGAGGAGGAGAGGATCTGAAGGAACTTaGGGGAGTGGAAAATATGATCAAAGTACATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: INIGRRRGSEGT*GSGKYDQSTFK Trigger: TTTAAATGTACTTTGATCATATTTTCCACTCCCCCAAGTTCCTTCAGATCCTCTCCTCCTCCCTATGTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR TCA 72 bp | TTACTGCCTGTTTTCACTTCTGCAACCACACTTGCCTaGAAAGATCTCACAATTTGTGATTTTGCTATATAC | + |
|
Preference number: 3 (lower is better) Translates to: LLPVFTSATTLA*KDLTICDFAIY Trigger: GTATATAGCAAAATCACAAATTGTGAGATCTTTTCAGGCAAGTGTGGTTGCAGAAGTGAAAACAGGCAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR TCA 72 bp | TTATTTTGGGACATACATAGAAGGCAGAATCTTGATTaGGAGTTTTATCCCATCTGGGCTGGATGTATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFWDIHRRQNLD*EFYPIWAGCMF Trigger: AAACATACATCCAGCCCAGATGGGATAAAACTCTCAATCAAGATTCTGCCTTCTATGTATGTCCCAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR GCA 72 bp | CACCAATTTGGCTCTGATGTGCATACGAATAAAGCTTaGTTTAATTTAGTCATTATTTGGATCAATGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: HQFGSDVHTNKA*FNLVIIWINGL Trigger: AAGGCCATTGATCCAAATAATGACTAAATTAAAGCAAGCTTTATTCGTATGCACATCAGAGCCAAATTGGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS-3UTR CCA 90 bp | TACTATGGTGGTGTGGCTGCACTGTGCTGTGGAGAGCAGCGGGGCAATAACAAAGACTGCTGGTGCAGATaGAGAGGCCCCGGGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: YYGGVAALCCGEQRGNNKDCWCR*RGPGPP Trigger: GGGTGGCCCGGGGCCTCTCCATCTGCACCAGCAGTC...TTTGTTATTGCCCCGCTGCTCTCCACAGCACAGTGCAGCCACACCACCATAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCGGGGCAATAACAAAGGGCAGCTGCAAACCAGGCTTGCTCGGCTTCAGCTCAATTTCTCCATCTaGACATACCAACATTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: EQRGNNKGQLQTRLARLQLNFSI*TYQHST Trigger: GGTTGAATGTTGGTATGTTCAGATGGAGAAATTGAG...CTGAAGCCGAGCAAGCCTGGTTTGCAGCTGCCCTTTGTTATTGCCCCGCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CAA 72 bp | CAGATGGGGACAAGGAAAGAGACCCACAGCCAGACATaGAAAAGTACTATAAGCCTTGGAGCAGTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QMGTRKETHSQT*KSTISLGAVSL Trigger: AAGGCTGACTGCTCCAAGGCTTATAGTACTTTTCAATGTCTGGCTGTGGGTCTCTTTCCTTGTCCCCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS-3UTR TCA 90 bp | TACTATGGTGGTGTGGCTGCACTGTGCTGTGGAGAGCAGCGGGGCAATAACAAATCTCCAGGTAAACAATaGTCTTACAGCCTATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YYGGVAALCCGEQRGNNKSPGKQ*SYSLCH Trigger: ATGACATAGGCTGTAAGATCATTGTTTACCTGGAGA...TTTGTTATTGCCCCGCTGCTCTCCACAGCACAGTGCAGCCACACCACCATAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAAAGAGACCCACAGCCAGACATTGAAAAGTACTATAAGCCTTGGAGCAAGAATTCTATCCCTGTaGATCAGCACCAGGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TRKETHSQTLKSTISLGARILSL*ISTRGL Trigger: TAGCCCCCTGGTGCTGATTCACAGGGATAGAATTCT...TGCTCCAAGGCTTATAGTACTTTTCAATGTCTGGCTGTGGGTCTCTTTCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CAA 72 bp | TTCAGTGTTGGAGAGATGGCTCAGCACTTAGGAGCATaGTCTGGTGTTCCAGAGAAGCCAGGTTTAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSVGEMAQHLGA*SGVPEKPGLIS Trigger: AGAAATTAAACCTGGCTTCTCTGGAACACCAGACAATGCTCCTAAGTGCTGAGCCATCTCTCCAACACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CAA 72 bp | ATCATAGGATGCATGACAGCTTGTAGCTCTAGCTCCTaGGGACCTAAAACTCTCTTTAGGACTGTATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIGCMTACSSSS*GPKTLFRTVWA Trigger: TGCCCATACAGTCCTAAAGAGAGTTTTAGGTCCCAAGGAGCTAGAGCTACAAGCTGTCATGCATCCTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAAAGAGACCCACAGCCAGACATTGAAAAGTACTATAAGCCTTGGAGCAGCTGTTGCTAAGCTGTaGCATATTCAGACCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TRKETHSQTLKSTISLGAAVAKL*HIQTCT Trigger: AGTACAGGTCTGAATATGTCACAGCTTAGCAACAGC...TGCTCCAAGGCTTATAGTACTTTTCAATGTCTGGCTGTGGGTCTCTTTCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CAA 72 bp | AGCCAGAGCAGGATGTGGATGCTGTGTTATTCAGCCTaGCAGAGAGCTCTATACAAGGTCATTTTCCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SQSRMWMLCYSA*QRALYKVIFQI Trigger: TATTTGGAAAATGACCTTGTATAGAGCTCTCTGCAAGGCTGAATAACACAGCATCCACATCCTGCTCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS-3UTR GCA 90 bp | CTCATTAGTATATTGCCCAATTGGTCCATCCTAGTAGCATGCAATGTGTTCAGATGGAAGGATGTGCCATaGAGACTTTGGCTTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LISILPNWSILVACNVFRWKDVP*RLWLEL Trigger: AAGCTCAAGCCAAAGTCTGCATGGCACATCCTTCCA...TCTGAACACATTGCATGCTACTAGGATGGACCAATTGGGCAATATACTAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CAA 72 bp | ATCAATATGAGTAAAGCTCTCATGAGCTCCCAGAGATaGAAGCAGGATACATGGGGTCTGCATAGCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: INMSKALMSSQR*KQDTWGLHSFV Trigger: TACAAAGCTATGCAGACCCCATGTATCCTGCTTCAATCTCTGGGAGCTCATGAGAGCTTTACTCATATTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATTAATACAAACATCTCAAACCAAAAGCTaGTACTGTCTTTGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERERERKLIQTSQTKS*YCLWQS Trigger: GGACTGCCAAAGACAGTAGCAGCTTTTGGTTTGAGA...TGTTTGTATTAATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| 3UTR CAA 72 bp | CCAGAGAAGCCAGGTTTAATTTCTACCAACCATACATaGGATCAGAACAATCTGTGTAACTTCAGTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PEKPGLISTNHT*DQNNLCNFSQS Trigger: TGATTGACTGAAGTTACACAGATTGTTCTGATCCAATGTATGGTTGGTAGAAATTAAACCTGGCTTCTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS-3UTR CCA 90 bp | AACCATGAAGCATTCTGTAACAAATGTTCTGGGAAGATTTCCTTAACGGCTTTGTTCTGTAGAGAAGCTTaGAGTTCTGAATGTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHEAFCNKCSGKISLTALFCREA*SSECRE Trigger: TTCTCTACATTCAGAACTCCAAGCTTCTCTACAGAA...CAAAGCCGTTAAGGAAATCTTCCCAGAACATTTGTTACAGAATGCTTCATGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS GCA 90 bp | AAATACCATGTAGCCACTGGCCCCTCCCATAGCACCCTGAAACACTaGATCTCTCAGGACCATGAGAGGGAGAACAATCCATTTTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KYHVATGPSHSTLKH*ISQDHERENNPFYF Trigger: GAAATAAAATGGATTGTTCTCCCTCTCATGGTCCTGAGAGATGCAGTGTTTCAGGGTGCTATGGGAGGGGCCAGTGGCTACATGGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122275.3 ENSMUST00000236177.2 |
||
| CDS GCA 90 bp | ATTAAACCATTGAGTATCCAAAAGAATAGCAAGAATGGAAGGATGTaGCATGCAGACTTTGGCTTGAGCTTCCTCCACCCAGATGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IKPLSIQKNSKNGRM*HADFGLSFLHPDAL Trigger: CAGAGCATCTGGGTGGAGGAAGCTCAAGCCAAAGTCTGCATGGCACATCCTTCCATTCTTGCTATTCTTTTGGATACTCAATGGTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122275.3 ENSMUST00000236177.2 |
||
| CDS-3UTR CAA 90 bp | CTGTATTCAGGTATTCAGGGACACTCTGCCAATAAAGTCAGGCAGAGAAAGGGACAAATTCTAGAGTATTaGCCATCAATGTATTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LYSGIQGHSANKVRQRKGQILEY*PSMYCP Trigger: GGGACAATACATTGATGGCAAATACTCTAGAATTTG...TCCCTTTCTCTGCCTGACTTTATTGGCAGAGTGTCCCTGAATACCTGAATACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236177.2 |
||
| CDS CCA 72 bp | CAGCTCTCAGCTCAGGGGGAGTTCTGTAGAGAAGCTTaGAGTTCTGAATGTAGAGAACATGCTGGTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QLSAQGEFCREA*SSECREHAGGA Trigger: AGCACCACCAGCATGTTCTCTACATTCAGAACTCCAAGCTTCTCTACAGAACTCCCCCTGAGCTGAGAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122275.3 ENSMUST00000236177.2 |
||
| CDS GCA 72 bp | TTGAGTATCCAAAAGAATAGCAAGAATGGAAGGATGTaGCATGCAGACTTTGGCTTGAGCTTCCTCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSIQKNSKNGRM*HADFGLSFLHP Trigger: TGGGTGGAGGAAGCTCAAGCCAAAGTCTGCATGGCACATCCTTCCATTCTTGCTATTCTTTTGGATACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122275.3 ENSMUST00000236177.2 |
||
| CDS CAA 90 bp | CCTGTACTTGTGATGGAATGGATTAGGTTCATACTTATTAAACCATaGAGTATCCAAAAGAATAGCAAGAATGGAAGGATGTGCCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: PVLVMEWIRFILIKP*SIQKNSKNGRMCHA Trigger: TGCATGGCACATCCTTCCATTCTTGCTATTCTTTTGGATACTCAATGGTTTAATAAGTATGAACCTAATCCATTCCATCACAAGTACAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122275.3 ENSMUST00000236177.2 |
||
| CDS TCA 72 bp | CATAAAATAGCAATAGTTTTTGCTGTTGCTAAGCTGTaGCATATTCAGACCTGTACTTGTGATGGAATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HKIAIVFAVAKL*HIQTCTCDGMD Trigger: ATCCATTCCATCACAAGTACAGGTCTGAATATGTCACAGCTTAGCAACAGCAAAAACTATTGCTATTTTATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122275.3 ENSMUST00000236177.2 |
||
| CDS CCA 72 bp | AGCTGTGACATATTCAGACCTGTACTTGTGATGGAATaGATTAGGTTCATACTTATTAAACCATTGAGTATC | + |
|
Preference number: 6 (lower is better) Translates to: SCDIFRPVLVME*IRFILIKPLSI Trigger: GATACTCAATGGTTTAATAAGTATGAACCTAATCCATTCCATCACAAGTACAGGTCTGAATATGTCACAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122275.3 ENSMUST00000236177.2 |
||