Pregenerated sensors for VMN1R22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000115091Ensembl transcript IDs: ENSMUST00000227342.2, ENSMUST00000227650.2, ENSMUST00000228076.2, ENSMUST00000228257.2, ENSMUST00000228322.2, ENSMUST00000228905.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGATAGCCGTGCAGGTTGGGTGTTCCTATGGGATTCCTTACAGTaGGAGTGGGGTGTCTCTTACTCTTTTGCCTATGCTTGGAACTTT | + |
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Preference number: 1 (lower is better) Translates to: HDSRAGWVFLWDSLQ*EWGVSYSFAYAWNF Trigger: AAAGTTCCAAGCATAGGCAAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGAATCCCATAGGAACACCCAACCTGCACGGCTATCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR CCA 90 bp | TCCTTAGGAAATTCTGAGGTAATGATGACTTGGAACTTGTGGGAGTaGCCAATGTCGGGTAAAACTTTAGCCCTGGAGGGAGTCCATGCT | + |
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Preference number: 1 (lower is better) Translates to: SLGNSEVMMTWNLWE*PMSGKTLALEGVHA Trigger: AGCATGGACTCCCTCCAGGGCTAAAGTTTTACCCGACATTGGCCACTCCCACAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR CCA 90 bp | AGCCGTGCAGGTTGGGTGTTCCTATGGGATTCCTTACAGTGGGAGTaGGGTGTCTCTTACTCTTTTGCCTATGCTTGGAACTTTATTTTT | + |
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Preference number: 1 (lower is better) Translates to: SRAGWVFLWDSLQWE*GVSYSFAYAWNFIF Trigger: AAAAATAAAGTTCCAAGCATAGGCAAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGAATCCCATAGGAACACCCAACCTGCACGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR CCA 90 bp | TATCCTTCCTTAGGAAATTCTGAGGTAATGATGACTTGGAACTTGTaGGAGTGGCCAATGTCGGGTAAAACTTTAGCCCTGGAGGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: YPSLGNSEVMMTWNL*EWPMSGKTLALEGV Trigger: GACTCCCTCCAGGGCTAAAGTTTTACCCGACATTGGCCACTCCCACAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR CCA 90 bp | CCTACAATCTATCCTTCCTTAGGAAATTCTGAGGTAATGATGACTTaGAACTTGTGGGAGTGGCCAATGTCGGGTAAAACTTTAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: PTIYPSLGNSEVMMT*NLWEWPMSGKTLAL Trigger: CAGGGCTAAAGTTTTACCCGACATTGGCCACTCCCACAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATAGATTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCAGGTTTGGAGGAACTTaGCAGGAAACTGTGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PGGSPCCLHHQEGEAGQLRFGGT*QETVSG Trigger: TCCTGACACAGTTTCCTGTCAAGTTCCTCCAAACCT...GAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCAGGGATCACAGAGATTaGAGTAACAAACATGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: PGGSPCCLHHQEGEAGQLRDHRD*SNKHGP Trigger: GGGTCCATGTTTGTTACTTCAATCTCTGTGATCCCT...GAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCTCCTTACAGTGGGAGTaGGGTGTCTCTTACTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PGGSPCCLHHQEGEAGQLSLQWE*GVSYSF Trigger: AAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGA...GAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACAAGGGATCACAGAGATTaGAGTAACAAACATGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: GGSPCCLHHQEGEAGQLTRDHRD*SNKHGP Trigger: GGGTCCATGTTTGTTACTTCAATCTCTGTGATCCCT...TGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGTAGGTAGATTCTTGTTGGGTGGGCATGGGAACAGGAGGGACCAGGCAGAAGGAGGGAGTCCATGCTaGCTGCATCACCAGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FVGRFLLGGHGNRRDQAEGGSPC*LHHQEG Trigger: TCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCC...TTCTGCCTGGTCCCTCCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACATCCTTACAGTGGGAGTaGGGTGTCTCTTACTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: GGSPCCLHHQEGEAGQLTSLQWE*GVSYSF Trigger: AAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGA...TGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACATTCCATAGAAAACTATaGCCTCCTATGACTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GGSPCCLHHQEGEAGQLTFHRKL*PPMTSV Trigger: CACAGAAGTCATAGGAGGTCATAGTTTTCTATGGAA...TGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACAGATTTCCATAGAAAACTATaGCCTCCTATGACTTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GSPCCLHHQEGEAGQLTDFHRKL*PPMTSV Trigger: CACAGAAGTCATAGGAGGTCATAGTTTTCTATGGAA...ATCTGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACAACTCCTTACAAGCATTaGAAAGTCCATTTCCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: GGSPCCLHHQEGEAGQLTTPYKH*KVHFHR Trigger: TCTATGGAAATGGACTTTTCAATGCTTGTAAGGAGT...TGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR CAA 90 bp | ATCTTCCAGGGAAGGGGAAAAAGAATAGAATTTGTAGGTAGATTCTaGTTGGGTGGGCATGGGAACAGGAGGGACCAGGCAGAATGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: IFQGRGKRIEFVGRF*LGGHGNRRDQAEWG Trigger: CCCCCATTCTGCCTGGTCCCTCCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAATTCTATTCTTTTTCCCCTTCCCTGGAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTAGGTAGATTCTTGTTGGGTGGGCATGGGAACAGGAGGGACCAGGCAGAAAGGTTTGGAGGAACTTaGCAGGAAACTGTGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FVGRFLLGGHGNRRDQAERFGGT*QETVSG Trigger: TCCTGACACAGTTTCCTGTCAAGTTCCTCCAAACCT...TTCTGCCTGGTCCCTCCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAAAGAATAGAATTTGTAGGTAGATTCTTGTTGGGTGGGCATGGGAACAGGAGGGACCAGGCAGAATaGGGGAGGGATGGAGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GKRIEFVGRFLLGGHGNRRDQAE*GRDGGR Trigger: TCTCCCTCCATCCCTCCCCCATTCTGCCTGGTCCCT...CCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAATTCTATTCTTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACAGATTCCCTAATGATATTTTaGTATACTCAGACACCTATC | + |
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Preference number: 2 (lower is better) Translates to: GSPCCLHHQEGEAGQLTDSLMIF*YTQTPI Trigger: GATAGGTGTCTGAGTATAGCAAAATATCATTAGGGA...ATCTGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR CCA 90 bp | CTGATGAGAGCAGAGGCAGAGATCCATAACCAAATACTAGGCAGAGTCAGAGAAGATAGCCGTGCAGGTTaGGTGTTCCTATGGGATTCC | + |
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Preference number: 2 (lower is better) Translates to: LMRAEAEIHNQILGRVREDSRAG*VFLWDS Trigger: GGAATCCCATAGGAACACCCAACCTGCACGGCTATC...TTCTCTGACTCTGCCTAGTATTTGGTTATGGATCTCTGCCTCTGCTCTCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTACAGTGGGAGTGGGGTGTCTCTTACTCTTTTGCCTATGCTTGGAACTTTAAGGTTTGGAGGAACTTaGCAGGAAACTGTGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PYSGSGVSLTLLPMLGTLRFGGT*QETVSG Trigger: TCCTGACACAGTTTCCTGTCAAGTTCCTCCAAACCT...TAAAGTTCCAAGCATAGGCAAAAGAGTAAGAGACACCCCACTCCCACTGTAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTACAGTGGGAGTGGGGTGTCTCTTACTCTTTTGCCTATGCTTGGAACTTTATATGACTTCTGTGAGTaGCAGGAATGCACACACGCT | + |
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Preference number: 2 (lower is better) Translates to: PYSGSGVSLTLLPMLGTLYDFCE*QECTHA Trigger: AGCGTGTGTGCATTCCTGGCACTCACAGAAGTCATA...TAAAGTTCCAAGCATAGGCAAAAGAGTAAGAGACACCCCACTCCCACTGTAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGAGGCAGGACAGCTCACAGATCCAGAACAGAACCAAATACAACTGGAAATATGACTTCTGTGAGTaGCAGGAATGCACACACGCT | + |
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Preference number: 2 (lower is better) Translates to: KERQDSSQIQNRTKYNWKYDFCE*QECTHA Trigger: AGCGTGTGTGCATTCCTGGCACTCACAGAAGTCATA...TTTCCAGTTGTATTTGGTTCTGTTCTGGATCTGTGAGCTGTCCTGCCTCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR GCA 90 bp | CTGATGAGAGCAGAGGCAGAGATCCATAACCAAATACTAGGCAGAGTCAGAGAATATGACTTCTGTGAGTaGCAGGAATGCACACACGCT | + |
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Preference number: 2 (lower is better) Translates to: LMRAEAEIHNQILGRVREYDFCE*QECTHA Trigger: AGCGTGTGTGCATTCCTGGCACTCACAGAAGTCATA...TTCTCTGACTCTGCCTAGTATTTGGTTATGGATCTCTGCCTCTGCTCTCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR GCA 90 bp | CCTACAATCTATCCTTCCTTAGGAAATTCTGAGGTAATGATGACTTGGAACTTGCCTGGAGGGAGTCCATaGTGCCTGCATCACCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PTIYPSLGNSEVMMTWNLPGGSP*CLHHQE Trigger: TTCCTGGTGATGCAGGCAGCATGGACTCCCTCCAGG...CAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATAGATTGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR CAA 90 bp | ATCTATCCTTCCTTAGGAAATTCTGAGGTAATGATGACTTGGAACTaGTGGGAGTGGCCAATGTCGGGTAAAACTTTAGCCCTGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: IYPSLGNSEVMMTWN*WEWPMSGKTLALEG Trigger: TCCCTCCAGGGCTAAAGTTTTACCCGACATTGGCCACTCCCACAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGAGGCAGGACAGCTCACAGATCCAGAACAGAACCAAATACAACTGGAAAAGGGATCACAGAGATTaGAGTAACAAACATGGACCC | + |
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Preference number: 2 (lower is better) Translates to: KERQDSSQIQNRTKYNWKRDHRD*SNKHGP Trigger: GGGTCCATGTTTGTTACTTCAATCTCTGTGATCCCT...TTTCCAGTTGTATTTGGTTCTGTTCTGGATCTGTGAGCTGTCCTGCCTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGAGGCAGGACAGCTCACAGATCCAGAACAGAACCAAATACAACTGGAAATCCTTACAGTGGGAGTaGGGTGTCTCTTACTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: KERQDSSQIQNRTKYNWKSLQWE*GVSYSF Trigger: AAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGA...TTTCCAGTTGTATTTGGTTCTGTTCTGGATCTGTGAGCTGTCCTGCCTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGTTATCCTTGGGAGGCCTGCTGCTTGTCTTCTTAGGGGAAAAGGAGTGAATTTCCATAGAAAACTATaGCCTCCTATGACTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VVILGRPAACLLRGKGVNFHRKL*PPMTSV Trigger: CACAGAAGTCATAGGAGGTCATAGTTTTCTATGGAA...ATTCACTCCTTTTCCCCTAAGAAGACAAGCAGCAGGCCTCCCAAGGATAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAAAGAATAGAATTTGTAGGTAGATTCTTGTTGGGTGGGCATGGGAACAGGAGGTTTGGAGGAACTTaGCAGGAAACTGTGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GKRIEFVGRFLLGGHGNRRFGGT*QETVSG Trigger: TCCTGACACAGTTTCCTGTCAAGTTCCTCCAAACCT...CCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAATTCTATTCTTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | CCTACAATCTATCCTTCCTTAGGAAATTCTGAGGTAATGATGACTTGGAACTTGAGGTTTGGAGGAACTTaGCAGGAAACTGTGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PTIYPSLGNSEVMMTWNLRFGGT*QETVSG Trigger: TCCTGACACAGTTTCCTGTCAAGTTCCTCCAAACCT...CAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATAGATTGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTAATGATATTTTGCTATACTCAGACACCTATCCCAATTGTCACCAGAGAATATGACTTCTGTGAGTaGCAGGAATGCACACACGCT | + |
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Preference number: 2 (lower is better) Translates to: SLMIFCYTQTPIPIVTREYDFCE*QECTHA Trigger: AGCGTGTGTGCATTCCTGGCACTCACAGAAGTCATA...TTCTCTGGTGACAATTGGGATAGGTGTCTGAGTATAGCAAAATATCATTAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAAAGAATAGAATTTGTAGGTAGATTCTTGTTGGGTGGGCATGGGAACAGGAGAATGGGGGAGGGATaGAGGGAGAGTATTAAAATA | + |
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Preference number: 2 (lower is better) Translates to: GKRIEFVGRFLLGGHGNRRMGEG*RESIKI Trigger: TATTTTAATACTCTCCCTCCATCCCTCCCCCATTCT...CCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAATTCTATTCTTTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | CCTACAATCTATCCTTCCTTAGGAAATTCTGAGGTAATGATGACTTGGAACTTGAGGGATCACAGAGATTaGAGTAACAAACATGGACCC | + |
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Preference number: 2 (lower is better) Translates to: PTIYPSLGNSEVMMTWNLRDHRD*SNKHGP Trigger: GGGTCCATGTTTGTTACTTCAATCTCTGTGATCCCT...CAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATAGATTGTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTAATGATATTTTGCTATACTCAGACACCTATCCCAATTGTCACCAGAGAAAGGGATCACAGAGATTaGAGTAACAAACATGGACCC | + |
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Preference number: 2 (lower is better) Translates to: SLMIFCYTQTPIPIVTRERDHRD*SNKHGP Trigger: GGGTCCATGTTTGTTACTTCAATCTCTGTGATCCCT...TTCTCTGGTGACAATTGGGATAGGTGTCTGAGTATAGCAAAATATCATTAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTAATGATATTTTGCTATACTCAGACACCTATCCCAATTGTCACCAGAGAATCCTTACAGTGGGAGTaGGGTGTCTCTTACTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SLMIFCYTQTPIPIVTRESLQWE*GVSYSF Trigger: AAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGA...TTCTCTGGTGACAATTGGGATAGGTGTCTGAGTATAGCAAAATATCATTAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTAATGATATTTTGCTATACTCAGACACCTATCCCAATTGTCACCAGAGAAACTCCTTACAAGCATTaGAAAGTCCATTTCCATAGA | + |
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Preference number: 2 (lower is better) Translates to: SLMIFCYTQTPIPIVTRETPYKH*KVHFHR Trigger: TCTATGGAAATGGACTTTTCAATGCTTGTAAGGAGT...TTCTCTGGTGACAATTGGGATAGGTGTCTGAGTATAGCAAAATATCATTAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACAAAGGTTTGGAGGAACTaGACAGGAAACTGTGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: GGSPCCLHHQEGEAGQLTKVWRN*TGNCVR Trigger: CCTGACACAGTTTCCTGTCAAGTTCCTCCAAACCTT...TGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACAGATAAGGTTTGGAGGAACTaGACAGGAAACTGTGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSPCCLHHQEGEAGQLTDKVWRN*TGNCVR Trigger: CCTGACACAGTTTCCTGTCAAGTTCCTCCAAACCTT...ATCTGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR CCA 72 bp | CGTGCAGGTTGGGTGTTCCTATGGGATTCCTTACAGTaGGAGTGGGGTGTCTCTTACTCTTTTGCCTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: RAGWVFLWDSLQ*EWGVSYSFAYA Trigger: AGCATAGGCAAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGAATCCCATAGGAACACCCAACCTGCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTAGGTAGATTCTTGTTGGGTGGGCATGGGAACAGGAGGGACCAGGCAGAAAAGGTTTGGAGGAACTaGACAGGAAACTGTGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FVGRFLLGGHGNRRDQAEKVWRN*TGNCVR Trigger: CCTGACACAGTTTCCTGTCAAGTTCCTCCAAACCTT...TTCTGCCTGGTCCCTCCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR CCA 72 bp | GGTTGGGTGTTCCTATGGGATTCCTTACAGTGGGAGTaGGGTGTCTCTTACTCTTTTGCCTATGCTTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GWVFLWDSLQWE*GVSYSFAYAWN Trigger: GTTCCAAGCATAGGCAAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGAATCCCATAGGAACACCCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTAGGTAGATTCTTGTTGGGTGGGCATGGGAACAGGAGGGACCAGGCAGAAAGACACCTATCCCAATaGTCACCAGAGAAGCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: FVGRFLLGGHGNRRDQAERHLSQ*SPEKHH Trigger: ATGATGCTTCTCTGGTGACAATTGGGATAGGTGTCT...TTCTGCCTGGTCCCTCCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR CCA 72 bp | AATTCTGAGGTAATGATGACTTGGAACTTGTGGGAGTaGCCAATGTCGGGTAAAACTTTAGCCCTGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NSEVMMTWNLWE*PMSGKTLALEG Trigger: TCCCTCCAGGGCTAAAGTTTTACCCGACATTGGCCACTCCCACAAGTTCCAAGTCATCATTACCTCAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGAGGCAGGACAGCTCACAGATCCAGAACAGAACCAAATACAACTGGAAAAGACACCTATCCCAATaGTCACCAGAGAAGCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: KERQDSSQIQNRTKYNWKRHLSQ*SPEKHH Trigger: ATGATGCTTCTCTGGTGACAATTGGGATAGGTGTCT...TTTCCAGTTGTATTTGGTTCTGTTCTGGATCTGTGAGCTGTCCTGCCTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR TCA 72 bp | ATCAACTATGCAGGGATCAGAAGGGATCACAGAGATTaGAGTAACAAACATGGACCCTGTATGGGTCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: INYAGIRRDHRD*SNKHGPCMGLC Trigger: GCAGAGACCCATACAGGGTCCATGTTTGTTACTTCAATCTCTGTGATCCCTTCTGATCCCTGCATAGTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR CCA 72 bp | TTAGGAAATTCTGAGGTAATGATGACTTGGAACTTGTaGGAGTGGCCAATGTCGGGTAAAACTTTAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGNSEVMMTWNL*EWPMSGKTLAL Trigger: CAGGGCTAAAGTTTTACCCGACATTGGCCACTCCCACAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAAAGAATAGAATTTGTAGGTAGATTCTTGTTGGGTGGGCATGGGAACAGGGAGGGATTAGAAGGTTaGGAGGAACTTGACAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GKRIEFVGRFLLGGHGNREGLEG*EELDRK Trigger: TTTCCTGTCAAGTTCCTCCAAACCTTCTAATCCCTC...CCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAATTCTATTCTTTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR TCA 72 bp | CTTTCTACCTACAATCTATCCTTCCTTAGGAAATTCTaGGGTAATGATGACTTGGAACTTGTGGGAGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSTYNLSFLRKF*GNDDLELVGVA Trigger: GGCCACTCCCACAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATAGATTGTAGGTAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR CCA 72 bp | TATCCTTCCTTAGGAAATTCTGAGGTAATGATGACTTaGAACTTGTGGGAGTGGCCAATGTCGGGTAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: YPSLGNSEVMMT*NLWEWPMSGKT Trigger: AGTTTTACCCGACATTGGCCACTCCCACAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTACAATCTATCCTTCCTTAGGAAATTCTGAGGTAATGATGACTTGGAACTTGAAGGTTTGGAGGAACTaGACAGGAAACTGTGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PTIYPSLGNSEVMMTWNLKVWRN*TGNCVR Trigger: CCTGACACAGTTTCCTGTCAAGTTCCTCCAAACCTT...CAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATAGATTGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTACAATCTATCCTTCCTTAGGAAATTCTGAGGTAATGATGACTTGGAACTTGGTGTCTCTTACTCTTTaGCCTATGCTTGGAACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PTIYPSLGNSEVMMTWNLVSLTL*PMLGTL Trigger: TAAAGTTCCAAGCATAGGCAAAAGAGTAAGAGACAC...CAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGAAGGATAGATTGTAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR TCA 72 bp | TTAGTGAATCTTGCTAGTAATGTGTGGTTAGGAACCTaGACAGGTAATCTTCTAAAACTAGGCAAGGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVNLASNVWLGT*TGNLLKLGKAH Trigger: ATGAGCCTTGCCTAGTTTTAGAAGATTACCTGTTCAGGTTCCTAACCACACATTACTAGCAAGATTCACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCCTGATAGTGACAGCCTaGAACACACCCAGGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGGSPCCLHHQEGEAGQLLIVTA*NTPRRH Trigger: ATGCCTCCTGGGTGTGTTCCAGGCTGTCACTATCAG...GAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACATTCACCACAAACTTCTaGACAGTCAGGATGATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSPCCLHHQEGEAGQLTFTTNF*TVRMIG Trigger: CCCAATCATCCTGACTGTTCAGAAGTTTGTGGTGAA...TGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACAAGGTGCCTGATGCTATaGAGATGCTTGCATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGSPCCLHHQEGEAGQLTRCLML*RCLHFL Trigger: AAGAAAATGCAAGCATCTTCATAGCATCAGGCACCT...TGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACAGATTTCACCACAAACTTCTaGACAGTCAGGATGATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPCCLHHQEGEAGQLTDFTTNF*TVRMIG Trigger: CCCAATCATCCTGACTGTTCAGAAGTTTGTGGTGAA...ATCTGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCACAGATAGGTGCCTGATGCTATaGAGATGCTTGCATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSPCCLHHQEGEAGQLTDRCLML*RCLHFL Trigger: AAGAAAATGCAAGCATCTTCATAGCATCAGGCACCT...ATCTGTGAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTTGAGGTCACCAGGAGGACAAGGCTCATAGCATCAACTATGCAGGGATCAAGGTGCCTGATGCTATaGAGATGCTTGCATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVEVTRRTRLIASTMQGSRCLML*RCLHFL Trigger: AAGAAAATGCAAGCATCTTCATAGCATCAGGCACCT...TGATCCCTGCATAGTTGATGCTATGAGCCTTGTCCTCCTGGTGACCTCAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCTTACAGTGGGAGTGGGGTGTCTCTTACTCTTTTGCCTATGCTTGGAACTATGTTCTCAGGTGCCTaGTGCTATGAAGATGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPYSGSGVSLTLLPMLGTMFSGA*CYEDAC Trigger: GCAAGCATCTTCATAGCATCAGGCACCTGAGAACAT...AGTTCCAAGCATAGGCAAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTTATCCTTGGGAGGCCTGCTGCTTGTCTTCTTAGGGGAAAAGGAGTGAATTTCACCACAAACTTCTaGACAGTCAGGATGATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVILGRPAACLLRGKGVNFTTNF*TVRMIG Trigger: CCCAATCATCCTGACTGTTCAGAAGTTTGTGGTGAA...ATTCACTCCTTTTCCCCTAAGAAGACAAGCAGCAGGCCTCCCAAGGATAACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAAAGAATAGAATTTGTAGGTAGATTCTTGTTGGGTGGGCATGGGAACAGGCTGATAGTGACAGCCTaGAACACACCCAGGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKRIEFVGRFLLGGHGNRLIVTA*NTPRRH Trigger: ATGCCTCCTGGGTGTGTTCCAGGCTGTCACTATCAG...CCTGTTCCCATGCCCACCCAACAAGAATCTACCTACAAATTCTATTCTTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR TCA 90 bp | CTGATGAGAGCAGAGGCAGAGATCCATAACCAAATACTAGGCAGAGTCAGAGAATTCACCACAAACTTCTaGACAGTCAGGATGATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LMRAEAEIHNQILGRVREFTTNF*TVRMIG Trigger: CCCAATCATCCTGACTGTTCAGAAGTTTGTGGTGAA...TTCTCTGACTCTGCCTAGTATTTGGTTATGGATCTCTGCCTCTGCTCTCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTTATCCTTGGGAGGCCTGCTGCTTGTCTTCTTAGGGGAAAAGGAGTGAATGTTCATGGGAAAGTGTaGACAGGTTTTAGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVILGRPAACLLRGKGVNVHGKV*TGFSDS Trigger: AGAATCACTAAAACCTGTTCACACTTTCCCATGAAC...ATTCACTCCTTTTCCCCTAAGAAGACAAGCAGCAGGCCTCCCAAGGATAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTAATGATATTTTGCTATACTCAGACACCTATCCCAATTGTCACCAGAGAACTGATAGTGACAGCCTaGAACACACCCAGGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLMIFCYTQTPIPIVTRELIVTA*NTPRRH Trigger: ATGCCTCCTGGGTGTGTTCCAGGCTGTCACTATCAG...TTCTCTGGTGACAATTGGGATAGGTGTCTGAGTATAGCAAAATATCATTAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| 3UTR CAA 72 bp | TACTATATCTTGCTATGGCATGTTCAGTTGTTATCCTaGGGAGGCCTGCTGCTTGTCTTCTTAGGGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YYILLWHVQLLS*GGLLLVFLGEK Trigger: CTTTTCCCCTAAGAAGACAAGCAGCAGGCCTCCCAAGGATAACAACTGAACATGCCATAGCAAGATATAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| 3UTR CAA 72 bp | TCCTTAGGAAATTCTGAGGTAATGATGACTTGGAACTaGTGGGAGTGGCCAATGTCGGGTAAAACTTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGNSEVMMTWN*WEWPMSGKTLA Trigger: GGCTAAAGTTTTACCCGACATTGGCCACTCCCACAAGTTCCAAGTCATCATTACCTCAGAATTTCCTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAGAGGCAGGACAGCTCACAGATCCAGAACAGAACCAAATACAACTGGAAAGTTCATGGGAAAGTGTaGACAGGTTTTAGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KERQDSSQIQNRTKYNWKVHGKV*TGFSDS Trigger: AGAATCACTAAAACCTGTTCACACTTTCCCATGAAC...TTTCCAGTTGTATTTGGTTCTGTTCTGGATCTGTGAGCTGTCCTGCCTCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTAATGATATTTTGCTATACTCAGACACCTATCCCAATTGTCACCAGAGAAAGGTGCCTGATGCTATaGAGATGCTTGCATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLMIFCYTQTPIPIVTRERCLML*RCLHFL Trigger: AAGAAAATGCAAGCATCTTCATAGCATCAGGCACCT...TTCTCTGGTGACAATTGGGATAGGTGTCTGAGTATAGCAAAATATCATTAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000227342.2 ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228905.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCAACAGTAGAAACATATaGGCTAGAACTCCAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGGSPCCLHHQEGEAGQLNSRNI*ARTPSP Trigger: TGGACTTGGAGTTCTAGCCAATATGTTTCTACTGTT...GAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGGGAGTCCATGCTGCCTGCATCACCAGGAAGGAGAGGCAGGACAGCTCAATTCCTTGATGATGTaGTTCATGGGAAAGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGGSPCCLHHQEGEAGQLNSLMM*FMGKCE Trigger: TTCACACTTTCCCATGAACAACATCATCAAGGAATT...GAGCTGTCCTGCCTCTCCTTCCTGGTGATGCAGGCAGCATGGACTCCCTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTTGAGGTCACCAGGAGGACAAGGCTCATAGCATCAACTATGCAGGGATCAAATTCCTTGATGATGTaGTTCATGGGAAAGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVEVTRRTRLIASTMQGSNSLMM*FMGKCE Trigger: TTCACACTTTCCCATGAACAACATCATCAAGGAATT...TGATCCCTGCATAGTTGATGCTATGAGCCTTGTCCTCCTGGTGACCTCAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTTATCCTTGGGAGGCCTGCTGCTTGTCTTCTTAGGGGAAAAGGAGTGAATAACAGTAGAAACATATaGGCTAGAACTCCAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVILGRPAACLLRGKGVNNSRNI*ARTPSP Trigger: TGGACTTGGAGTTCTAGCCAATATGTTTCTACTGTT...ATTCACTCCTTTTCCCCTAAGAAGACAAGCAGCAGGCCTCCCAAGGATAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGGCAGGACAGCTCACAGATCCAGAACAGAACCAAATACAACTGGAAAGTGATTCTCATCTGGTaGGTCTCACTCCTATTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KERQDSSQIQNRTKYNWKVILIW*VSLLLL Trigger: TAACAATAGGAGTGAGACCAACCAGATGAGAATCAC...TTTCCAGTTGTATTTGGTTCTGTTCTGGATCTGTGAGCTGTCCTGCCTCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR CAA 90 bp | ATTCCTTACAGTGGGAGTGGGGTGTCTCTTACTCTTTTGCCTATGCTTGGAACTAACAGTAGAAACATATaGGCTAGAACTCCAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IPYSGSGVSLTLLPMLGTNSRNI*ARTPSP Trigger: TGGACTTGGAGTTCTAGCCAATATGTTTCTACTGTT...AGTTCCAAGCATAGGCAAAAGAGTAAGAGACACCCCACTCCCACTGTAAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTAATGATATTTTGCTATACTCAGACACCTATCCCAATTGTCACCAGAGAAGTGATTCTCATCTGGTaGGTCTCACTCCTATTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLMIFCYTQTPIPIVTREVILIW*VSLLLL Trigger: TAACAATAGGAGTGAGACCAACCAGATGAGAATCAC...TTCTCTGGTGACAATTGGGATAGGTGTCTGAGTATAGCAAAATATCATTAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTAATGATATTTTGCTATACTCAGACACCTATCCCAATTGTCACCAGAGAAAATTCCTTGATGATGTaGTTCATGGGAAAGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLMIFCYTQTPIPIVTRENSLMM*FMGKCE Trigger: TTCACACTTTCCCATGAACAACATCATCAAGGAATT...TTCTCTGGTGACAATTGGGATAGGTGTCTGAGTATAGCAAAATATCATTAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 |
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| CDS CCA 72 bp | ATGGGAAAGTGTGAACAGGTTTTAGTGATTCTCATCTaGTTGGTCTCACTCCTATTGTTAAAACCACCAACA | + |
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Preference number: 6 (lower is better) Translates to: MGKCEQVLVILI*LVSLLLLKPPT Trigger: TGTTGGTGGTTTTAACAATAGGAGTGAGACCAACCAGATGAGAATCACTAAAACCTGTTCACACTTTCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000227650.2 ENSMUST00000228076.2 ENSMUST00000228257.2 ENSMUST00000228322.2 |
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