Pregenerated sensors for VMN1R219 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061376Ensembl transcript IDs: ENSMUST00000076180.2, ENSMUST00000226845.2, ENSMUST00000227388.2, ENSMUST00000228113.2, ENSMUST00000228666.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GAGACAGATCAGGCTGTCTGGGTGTCAGCAGGTGATTTTACTCTCTaGGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAAC | + |
Preference number: 1 (lower is better) Translates to: ETDQAVWVSAGDFTL*VISHVLCPFLMLNN Trigger: GTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTAAAATCACCTGCTGACACCCAGACAGCCTGATCTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CCA 90 bp | AGTACAACATTATTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTaGTGCATTGGGCCTCTGTTGACGAACTACATGGTACATATGTAC | + |
Preference number: 1 (lower is better) Translates to: STTLLRCFRACMLCG*CIGPLLTNYMVHMY Trigger: GTACATATGTACCATGTAGTTCGTCAACAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAATGTTGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 90 bp | AACATGCCTAAAATCCCAGATTTTCTTATCCTTAGAACAGGAGTTTaGCTGTTTCTCTGTGGCACCAACAGACTCCAGCAGATAGGCTTC | + |
Preference number: 1 (lower is better) Translates to: NMPKIPDFLILRTGV*LFLCGTNRLQQIGF Trigger: GAAGCCTATCTGCTGGAGTCTGTTGGTGCCACAGAGAAACAGTCAAACTCCTGTTCTAAGGATAAGAAAATCTGGGATTTTAGGCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 90 bp | AAGATGAAAGCTGGCAAGCTCTATGTACCCACAGCTTCATACTTCTaGTTATATGAGGAACCAGCCATTAGCAGGATCCACAATAGGAAG | + |
Preference number: 1 (lower is better) Translates to: KMKAGKLYVPTASYF*LYEEPAISRIHNRK Trigger: CTTCCTATTGTGGATCCTGCTAATGGCTGGTTCCTCATATAATCAGAAGTATGAAGCTGTGGGTACATAGAGCTTGCCAGCTTTCATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CCA 90 bp | ATTATTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTaGGCCTCTGTTGACGAACTACATGGTACATATGTACATTTGCAA | + |
Preference number: 1 (lower is better) Translates to: IIEMFQGMYALWLVH*ASVDELHGTYVHLQ Trigger: TTGCAAATGTACATATGTACCATGTAGTTCGTCAACAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 90 bp | GTACTTAATCGCAGCTATTTCAGGATGCAGGGGCAGATGGATCTCTaGTTTCCAGGCCATGTTGTTTTACATAATGAGTATCTACAGATA | + |
Preference number: 1 (lower is better) Translates to: VLNRSYFRMQGQMDL*FPGHVVLHNEYLQI Trigger: TATCTGTAGATACTCATTATGTAAAACAACATGGCCTGGAAATCAGAGATCCATCTGCCCCTGCATCCTGAAATAGCTGCGATTAAGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 90 bp | AGACACTTAGAACAGGGCTTTACCATAAGAGCTGTGAGAATAACTTaGGCAATGGATGTTACCTACAGAGAACATTTTCATCAGAAAGAC | + |
Preference number: 1 (lower is better) Translates to: RHLEQGFTIRAVRIT*AMDVTYREHFHQKD Trigger: GTCTTTCTGATGAAAATGTTCTCTGTAGGTAACATCCATTGCTCAAGTTATTCTCACAGCTCTTATGGTAAAGCCCTGTTCTAAGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CCA 90 bp | GTACCTAAAACTCTCTTCAGGCCTGTATGGGTACCTGTACAAATTTaGCAAACATTCACACATACATTCCATATGTGTCTACATATTCAT | + |
Preference number: 1 (lower is better) Translates to: VPKTLFRPVWVPVQI*QTFTHTFHMCLHIH Trigger: ATGAATATGTAGACACATATGGAATGTATGTGTGAATGTTTGCCAAATTTGTACAGGTACCCATACAGGCCTGAAGAGAGTTTTAGGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 90 bp | CTCCATGTTCTTACATCACTTTCTTTTGAGTCAAATTACACAAACTaGTTTAGAAGGTGTTGGTTTGTCTGGTTCTTTATGTCAGACACT | + |
Preference number: 1 (lower is better) Translates to: LHVLTSLSFESNYTN*FRRCWFVWFFMSDT Trigger: AGTGTCTGACATAAAGAACCAGACAAACCAACACCTTCTAAATCAGTTTGTGTAATTTGACTCAAAAGAAAGTGATGTAAGAACATGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGCAAGGTTCCTCCCCTTaGCCCCTGCTGATCCTGAGT | + |
Preference number: 2 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQQGSSP*PLLILS Trigger: ACTCAGGATCAGCAGGGGCCAAGGGGAGGAACCTTG...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGACAAGGTTCCTCCCCTTaGCCCCTGCTGATCCTGAGT | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRQGSSP*PLLILS Trigger: ACTCAGGATCAGCAGGGGCCAAGGGGAGGAACCTTG...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGGCTGCAAAGCAGCCTTaGTCAGCTTCAGTCACACTC | + |
Preference number: 2 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQAAKQP*SASVTL Trigger: GAGTGTGACTGAAGCTGACCAAGGCTGCTTTGCAGC...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGATGCTCTGTGGCTGGTaGATTGGGCCTCTGTTGACG | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKMLCGW*IGPLLT Trigger: CGTCAACAGAGGCCCAATGCACCAGCCACAGAGCAT...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGGGTGGTGAAAAGACCTaGTCCTCTCTCAGAGACCTC | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKGGEKT*SSLRDL Trigger: GAGGTCTCTGAGAGAGGAGCAGGTCTTTTCACCACC...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGACAGATCAGGCTGTCTaGGTGTCAGCAGGTGATTTT | + |
Preference number: 2 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQTDQAV*VSAGDF Trigger: AAAATCACCTGCTGACACCCAGACAGCCTGATCTGT...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGATCTCAGCACACATGTaGAGGTCAGATGACAGCATG | + |
Preference number: 2 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQISAHM*RSDDSM Trigger: CATGCTGTCATCTGACCTCCACATGTGTGCTGAGAT...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGATTGACTGTTTCTCTGTaGCACCAACAGACTCCAGCA | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRLTVSL*HQQTPA Trigger: TGCTGGAGTCTGTTGGTGCCACAGAGAAACAGTCAA...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGAACTGAATGGCATAACTaGTTTTTCCCCTCGTTGCCT | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRTEWHN*FFPSLP Trigger: AGGCAACGAGGGGAAAAATCAGTTATGCCATTCAGT...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGATGGCGCATGTTTATGTaGCCTATGAAACACCTTGTG | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRWRMFM*PMKHLV Trigger: CACAAGGTGTTTCATAGGTCACATAAACATGCGCCA...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATTTGGTATGTCCCTaGCTGTGTTCATGGGTGTAT | + |
Preference number: 2 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQYLVCP*LCSWVY Trigger: ATACACCCATGAACACAGGCAGGGACATACCAAATA...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGATCTCAGCACACATGTaGAGGTCAGATGACAGCATG | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKISAHM*RSDDSM Trigger: CATGCTGTCATCTGACCTCCACATGTGTGCTGAGAT...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGAGCTGTGAGAATAACTTaGGCAATGGATGTTACCTAC | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRAVRIT*AMDVTY Trigger: GTAGGTAACATCCATTGCTCAAGTTATTCTCACAGC...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGACTGAATGGCATAACTaGTTTTTCCCCTCGTTGCCT | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKTEWHN*FFPSLP Trigger: AGGCAACGAGGGGAAAAATCAGTTATGCCATTCAGT...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGAACAGCTTCATACTTCTaGTTATATGAGGAACCAGCC | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRTASYF*LYEEPA Trigger: GGCTGGTTCCTCATATAATCAGAAGTATGAAGCTGT...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | ACCAAAGGGCAGCTGCAAAGCAGCCTTGGTCAGCTTCAGTCACACTCCTTGATTTTCTTAACCACATGCTaGAGAACCCAGAGTTCTTTC | + |
Preference number: 2 (lower is better) Translates to: TKGQLQSSLGQLQSHSLIFLTTC*RTQSSF Trigger: GAAAGAACTCTGGGTTCTGCAGCATGTGGTTAAGAA...AATCAAGGAGTGTGACTGAAGCTGACCAAGGCTGCTTTGCAGCTGCCCTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGATTCTTAACCACATGCTaGAGAACCCAGAGTTCTTTC | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRFLTTC*RTQSSF Trigger: GAAAGAACTCTGGGTTCTGCAGCATGTGGTTAAGAA...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGACACGCCTTTCTTCATaGTTTCTCCATGTTCTTACA | + |
Preference number: 2 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQTRLSS*FLHVLT Trigger: TGTAAGAACATGGAGAAAGCATGAAGAAAGGCGTGT...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGGATTTTTCCCCTCGTTaGCTTTACTTTCCCTTACTT | + |
Preference number: 2 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQDFSPR*LYFPLL Trigger: AAGTAAGGGAAAGTAAAGGCAACGAGGGGAAAAATC...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGCAACAGATAAACTCATaGATCTCCAAGCATACAAGG | + |
Preference number: 2 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQQQINS*ISKHTR Trigger: CCTTGTATGCTTGGAGATGCATGAGTTTATCTGTTG...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGACTTATTTCTTGGGGCTaGAGTGATACCTCAGTCATT | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRLISWG*SDTSVI Trigger: AATGACTGAGGTATCACTCCAGCCCCAAGAAATAAG...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | ACCAAAGGGCAGCTGCAAAGCAGCCTTGGTCAGCTTCAGTCACACTCCTTGATTCTTATTTCTTGGGGCTaGAGTGATACCTCAGTCATT | + |
Preference number: 2 (lower is better) Translates to: TKGQLQSSLGQLQSHSLILISWG*SDTSVI Trigger: AATGACTGAGGTATCACTCCAGCCCCAAGAAATAAG...AATCAAGGAGTGTGACTGAAGCTGACCAAGGCTGCTTTGCAGCTGCCCTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGATTTGAAGATGAAAGCTaGCAAGCTCTATGTACCCAC | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRFEDES*QALCTH Trigger: GTGGGTACATAGAGCTTGCCAGCTTTCATCTTCAAA...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 90 bp | ATCTCCAGTCTGTTCCTGCAGAGAACACTCATGAGTACAACATTATaGAGATGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTGGG | + |
Preference number: 2 (lower is better) Translates to: ISSLFLQRTLMSTTL*RCFRACMLCGWCIG Trigger: CCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAATGTTGTACTCATGAGTGTTCTCTGCAGGAACAGACTGGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGCTCCTTGATTCATTTTaGAAAGGAGAACCTAGAAAC | + |
Preference number: 2 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQLLDSF*KGEPRN Trigger: GTTTCTAGGTTCTCCTTTTCAAAATGAATCAAGGAG...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGGCTGTGAGAATAACTTaGGCAATGGATGTTACCTAC | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKAVRIT*AMDVTY Trigger: GTAGGTAACATCCATTGCTCAAGTTATTCTCACAGC...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGACAGCTTCATACTTCTaGTTATATGAGGAACCAGCC | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKTASYF*LYEEPA Trigger: GGCTGGTTCCTCATATAATCAGAAGTATGAAGCTGT...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTATTTCCCTCCCTGGCCTaGGTAAAAAGAGCAGCAGCT | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVFPSLA*VKRAAA Trigger: AGCTGCTGCTCTTTTTACTCAGGCCAGGGAGGGAAA...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTAGGTGGTGAAAAGACCTaGTCCTCTCTCAGAGACCTC | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVGGEKT*SSLRDL Trigger: GAGGTCTCTGAGAGAGGAGCAGGTCTTTTCACCACC...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTGGTGGTGAAAAGACCTaGTCCTCTCTCAGAGACCTC | + |
Preference number: 2 (lower is better) Translates to: YSLSHLSRPLSILNVEQPGGEKT*SSLRDL Trigger: GAGGTCTCTGAGAGAGGAGCAGGTCTTTTCACCACC...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGTATTTGGTATGTCCCTaGCTGTGTTCATGGGTGTAT | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKYLVCP*LCSWVY Trigger: ATACACCCATGAACACAGGCAGGGACATACCAAATA...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCATACCATGTAGCCACTaGCCCTCCCATTGCTCGCTG | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTIPCSH*PSHCSL Trigger: CAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTAT...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTGCTGCAAAGCAGCCTTaGTCAGCTTCAGTCACACTC | + |
Preference number: 2 (lower is better) Translates to: YSLSHLSRPLSILNVEQPAAKQP*SASVTL Trigger: GAGTGTGACTGAAGCTGACCAAGGCTGCTTTGCAGC...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR CCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGACCAGTCATTCTCCCTaGGATATAAATATCCCCTTG | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKTSHSP*DINIPL Trigger: CAAGGGGATATTTATATCCCAGGGAGAATGACTGGT...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGATACAGACAGATAAACTaGAATGTTGCTTTGTGCTGT | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRYRQIN*NVALCC Trigger: ACAGCACAAAGCAACATTTCAGTTTATCTGTCTGTA...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGATTCAGTCACACTCCTTaGTTCATTTTGAAAAGGAGA | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRFSHTP*FILKRR Trigger: TCTCCTTTTCAAAATGAATCAAGGAGTGTGACTGAA...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR GCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGCAACAGATAAACTCATaGATCTCCAAGCATACAAGG | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKQQINS*ISKHTR Trigger: CCTTGTATGCTTGGAGATGCATGAGTTTATCTGTTG...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR CCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCGCTGCAAAGCAGCCTTaGTCAGCTTCAGTCACACTC | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTAAKQP*SASVTL Trigger: GAGTGTGACTGAAGCTGACCAAGGCTGCTTTGCAGC...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR CCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGAATAGCTCTAGTTCCTTaGTACCTAAAACTCTCTTCA | + |
Preference number: 2 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRIALVP*YLKLSS Trigger: TGAAGAGAGTTTTAGGTACCAAGGAACTAGAGCTAT...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTCAAGGTTCCTCCCCTTaGCCCCTGCTGATCCTGAGT | + |
Preference number: 2 (lower is better) Translates to: LAITVHLYEILSTAMYKIQGSSP*PLLILS Trigger: ACTCAGGATCAGCAGGGGCCAAGGGGAGGAACCTTG...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR CCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTAGGTCCAAAGGTCATTTaGGGTCATGTGTCCTTTCCC | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVGPKVI*GHVSFP Trigger: GGGAAAGGACACATGACCCCAAATGACCTTTGGACC...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGTTCAGTCACACTCCTTaGTTCATTTTGAAAAGGAGA | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKFSHTP*FILKRR Trigger: TCTCCTTTTCAAAATGAATCAAGGAGTGTGACTGAA...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGGATAAACTGAAATGTTaGTTTGTGCTGTATCTCCAG | + |
Preference number: 2 (lower is better) Translates to: KKYHVATAPPIARCYSIKDKLKC*FVLYLQ Trigger: CTGGAGATACAGCACAAAGCAACATTTCAGTTTATC...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTATGGCGCATGTTTATGTaGCCTATGAAACACCTTGTG | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVWRMFM*PMKHLV Trigger: CACAAGGTGTTTCATAGGTCACATAAACATGCGCCA...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTCTCTTCAGGCCTGTATaGGTACCTGTACAAATTTGG | + |
Preference number: 2 (lower is better) Translates to: YSLSHLSRPLSILNVEQPLFRPV*VPVQIW Trigger: CCAAATTTGTACAGGTACCCATACAGGCCTGAAGAG...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCATCTCAGCACACATGTaGAGGTCAGATGACAGCATG | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTISAHM*RSDDSM Trigger: CATGCTGTCATCTGACCTCCACATGTGTGCTGAGAT...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 90 bp | TGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTGGGCCTCTGTaGACGAACTACATGGTACATATGTACATTTGCAATTCTATAAAA | + |
Preference number: 2 (lower is better) Translates to: CFRACMLCGWCIGPL*TNYMVHMYICNSIK Trigger: TTTTATAGAATTGCAAATGTACATATGTACCATGTAGTTCGTCAACAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 90 bp | AAGATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATaGGAGACTGTAGAAAATAAGTGTGTGTACACCATGGTCCAAAGG | + |
Preference number: 2 (lower is better) Translates to: KIKGPTDVRGNAQIP*ETVENKCVYTMVQR Trigger: CCTTTGGACCATGGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTATTCTTAACCACATGCTaGAGAACCCAGAGTTCTTTC | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVFLTTC*RTQSSF Trigger: GAAAGAACTCTGGGTTCTGCAGCATGTGGTTAAGAA...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTATCAAACCTCCCACCTTaGCATTACAGTTCATCTCTA | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVSNLPP*HYSSSL Trigger: TAGAGATGAACTGTAATGGCAAGGTGGGAGGTTTGA...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTACTTATTTCTTGGGGCTaGAGTGATACCTCAGTCATT | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVLISWG*SDTSVI Trigger: AATGACTGAGGTATCACTCCAGCCCCAAGAAATAAG...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTAACCAGTCATTCTCCCTaGGATATAAATATCCCCTTG | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVTSHSP*DINIPL Trigger: CAAGGGGATATTTATATCCCAGGGAGAATGACTGGT...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCGCTGTGAGAATAACTTaGGCAATGGATGTTACCTAC | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTAVRIT*AMDVTY Trigger: GTAGGTAACATCCATTGCTCAAGTTATTCTCACAGC...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCTTCTTAACCACATGCTaGAGAACCCAGAGTTCTTTC | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTFLTTC*RTQSSF Trigger: GAAAGAACTCTGGGTTCTGCAGCATGTGGTTAAGAA...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTAACACGCCTTTCTTCATaGTTTCTCCATGTTCTTACA | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVTRLSS*FLHVLT Trigger: TGTAAGAACATGGAGAAAGCATGAAGAAAGGCGTGT...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCCTTATTTCTTGGGGCTaGAGTGATACCTCAGTCATT | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTLISWG*SDTSVI Trigger: AATGACTGAGGTATCACTCCAGCCCCAAGAAATAAG...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTAGGTGTTGGTTTGTCTaGTTCTTTATGTCAGACACT | + |
Preference number: 2 (lower is better) Translates to: YSLSHLSRPLSILNVEQPRCWFV*FFMSDT Trigger: AGTGTCTGACATAAAGAACCAGACAAACCAACACCT...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTTTGACTGTTTCTCTGTaGCACCAACAGACTCCAGCA | + |
Preference number: 2 (lower is better) Translates to: LAITVHLYEILSTAMYKILTVSL*HQQTPA Trigger: TGCTGGAGTCTGTTGGTGCCACAGAGAAACAGTCAA...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCTTTGAAGATGAAAGCTaGCAAGCTCTATGTACCCAC | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTFEDES*QALCTH Trigger: GTGGGTACATAGAGCTTGCCAGCTTTCATCTTCAAA...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTTACAGACAGATAAACTaGAATGTTGCTTTGTGCTGT | + |
Preference number: 2 (lower is better) Translates to: YSLSHLSRPLSILNVEQPYRQIN*NVALCC Trigger: ACAGCACAAAGCAACATTTCAGTTTATCTGTCTGTA...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTTTCAGTCACACTCCTTaGTTCATTTTGAAAAGGAGA | + |
Preference number: 2 (lower is better) Translates to: YSLSHLSRPLSILNVEQPFSHTP*FILKRR Trigger: TCTCCTTTTCAAAATGAATCAAGGAGTGTGACTGAA...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR TCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTGGCCTAAGAATTGCATaGCCAAGGGTCAGAAATACT | + |
Preference number: 2 (lower is better) Translates to: LAITVHLYEILSTAMYKIGLRIA*PRVRNT Trigger: AGTATTTCTGACCCTTGGTCATGCAATTCTTAGGCC...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTAGATAAACTGAAATGTTaGTTTGTGCTGTATCTCCAG | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVDKLKC*FVLYLQ Trigger: CTGGAGATACAGCACAAAGCAACATTTCAGTTTATC...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCTCTCTCAGAGACCTCTaGTTCCTTATTCAAAATCCA | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTSLRDL*FLIQNP Trigger: TGGATTTTGAATAAGGAAGCAGAGGTCTCTGAGAGA...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCGATTTTTCCCCTCGTTaGCTTTACTTTCCCTTACTT | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTDFSPR*LYFPLL Trigger: AAGTAAGGGAAAGTAAAGGCAACGAGGGGAAAAATC...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCCAACAGATAAACTCATaGATCTCCAAGCATACAAGG | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTQQINS*ISKHTR Trigger: CCTTGTATGCTTGGAGATGCATGAGTTTATCTGTTG...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCATTAAGAGCACTGGCTaGCATTTAGCAGTTCAAGAT | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTIKSTG*HLAVQD Trigger: ATCTTGAACTGCTAAATGCCAGCCAGTGCTCTTAAT...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTCTCTTCAGGCCTGTATaGGTACCTGTACAAATTTGG | + |
Preference number: 2 (lower is better) Translates to: LAITVHLYEILSTAMYKILFRPV*VPVQIW Trigger: CCAAATTTGTACAGGTACCCATACAGGCCTGAAGAG...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCAGGTGTTGGTTTGTCTaGTTCTTTATGTCAGACACT | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTRCWFV*FFMSDT Trigger: AGTGTCTGACATAAAGAACCAGACAAACCAACACCT...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 90 bp | CAGACACTTAGAACAGGGCTTTACCATAAGAGCTGTGAGAATAACTaGAGCAATGGATGTTACCTACAGAGAACATTTTCATCAGAAAGA | + |
Preference number: 2 (lower is better) Translates to: QTLRTGLYHKSCENN*SNGCYLQRTFSSER Trigger: TCTTTCTGATGAAAATGTTCTCTGTAGGTAACATCCATTGCTCAAGTTATTCTCACAGCTCTTATGGTAAAGCCCTGTTCTAAGTGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR TCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCTACAGACAGATAAACTaGAATGTTGCTTTGTGCTGT | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTYRQIN*NVALCC Trigger: ACAGCACAAAGCAACATTTCAGTTTATCTGTCTGTA...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR TCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCCTCCTTGATTCATTTTaGAAAGGAGAACCTAGAAAC | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTLLDSF*KGEPRN Trigger: GTTTCTAGGTTCTCCTTTTCAAAATGAATCAAGGAG...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR GCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCGATAAACTGAAATGTTaGTTTGTGCTGTATCTCCAG | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTDKLKC*FVLYLQ Trigger: CTGGAGATACAGCACAAAGCAACATTTCAGTTTATC...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTTATTTGGTATGTCCCTaGCTGTGTTCATGGGTGTAT | + |
Preference number: 2 (lower is better) Translates to: LAITVHLYEILSTAMYKIYLVCP*LCSWVY Trigger: ATACACCCATGAACACAGGCAGGGACATACCAAATA...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTCTAGGAATCATATTTTaGTTCAGAACCCTCTATCTT | + |
Preference number: 2 (lower is better) Translates to: YSLSHLSRPLSILNVEQPLGIIF*FRTLYL Trigger: AAGATAGAGGGTTCTGAACCAAAATATGATTCCTAG...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTACTAGGAATCATATTTTaGTTCAGAACCCTCTATCTT | + |
Preference number: 2 (lower is better) Translates to: IKGPTDVRGNAQIPLETVLGIIF*FRTLYL Trigger: AAGATAGAGGGTTCTGAACCAAAATATGATTCCTAG...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTGATTTTTCCCCTCGTTaGCTTTACTTTCCCTTACTT | + |
Preference number: 2 (lower is better) Translates to: LAITVHLYEILSTAMYKIDFSPR*LYFPLL Trigger: AAGTAAGGGAAAGTAAAGGCAACGAGGGGAAAAATC...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR GCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCCGAAATATTGAGCACTaGCATGTACAAAATTTTCCT | + |
Preference number: 2 (lower is better) Translates to: RGNAQIPLETVENKCVYTRNIEH*HVQNFP Trigger: AGGAAAATTTTGTACATGGCAGTGCTCAATATTTCG...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTATTAAGAGCACTGGCTaGCATTTAGCAGTTCAAGAT | + |
Preference number: 2 (lower is better) Translates to: LAITVHLYEILSTAMYKIIKSTG*HLAVQD Trigger: ATCTTGAACTGCTAAATGCCAGCCAGTGCTCTTAAT...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR GCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTGATAAACTGAAATGTTaGTTTGTGCTGTATCTCCAG | + |
Preference number: 2 (lower is better) Translates to: LAITVHLYEILSTAMYKIDKLKC*FVLYLQ Trigger: CTGGAGATACAGCACAAAGCAACATTTCAGTTTATC...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 90 bp | TTTCTTTTGAGTCAAATTACACAAACTGATTTAGAAGGTGTTGGTTaGTCTGGTTCTTTATGTCAGACACTTAGAACAGGGCTTTACCAT | + |
Preference number: 2 (lower is better) Translates to: FLLSQITQTDLEGVG*SGSLCQTLRTGLYH Trigger: ATGGTAAAGCCCTGTTCTAAGTGTCTGACATAAAGAACCAGACAAACCAACACCTTCTAAATCAGTTTGTGTAATTTGACTCAAAAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTCTAGGAATCATATTTTaGTTCAGAACCCTCTATCTT | + |
Preference number: 2 (lower is better) Translates to: LAITVHLYEILSTAMYKILGIIF*FRTLYL Trigger: AAGATAGAGGGTTCTGAACCAAAATATGATTCCTAG...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTACCAAGGTTCCTCCCCTaGGCCCCTGCTGATCCTGAG | + |
Preference number: 3 (lower is better) Translates to: IKGPTDVRGNAQIPLETVPRFLP*APADPE Trigger: CTCAGGATCAGCAGGGGCCAAGGGGAGGAACCTTGG...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGCTGAGGAAAGAGTGTTaGTCCTTCTGGCTCTCTTGT | + |
Preference number: 3 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQLRKEC*SFWLSC Trigger: ACAAGAGAGCCAGAAGGACAAACACTCTTTCCTCAG...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 72 bp | TTCAGAGACAGATCAGGCTGTCTGGGTGTCAGCAGGTaGTTTTACTCTCTGAGTCATCTCTCACGTCCTCTG | + |
Preference number: 3 (lower is better) Translates to: FRDRSGCLGVSR*FYSLSHLSRPL Trigger: CAGAGGACGTGAGAGATGACTCAGAGAGTAAAATCACCTGCTGACACCCAGACAGCCTGATCTGTCTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR GCA 72 bp | CAGTGGCTCATGTACTTAATCGCAGCTATTTCAGGATaGAGGGGCAGATGGATCTCTGATTTCCAGGCCATG | + |
Preference number: 3 (lower is better) Translates to: QWLMYLIAAISG*RGRWISDFQAM Trigger: CATGGCCTGGAAATCAGAGATCCATCTGCCCCTGCATCCTGAAATAGCTGCGATTAAGTACATGAGCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CCA 72 bp | ATCTCAGCACACATGTGGAGGTCAGATGACAGCATGTaGGGGTCAGTTTTCTTCTTCAGAGACAGATCAGGC | + |
Preference number: 3 (lower is better) Translates to: ISAHMWRSDDSM*GSVFFFRDRSG Trigger: GCCTGATCTGTCTCTGAAGAAGAAAACTGACCCCCACATGCTGTCATCTGACCTCCACATGTGTGCTGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 72 bp | CAGGCTGTCTGGGTGTCAGCAGGTGATTTTACTCTCTaGGTCATCTCTCACGTCCTCTGTCCATTCTTAATG | + |
Preference number: 3 (lower is better) Translates to: QAVWVSAGDFTL*VISHVLCPFLM Trigger: CATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTAAAATCACCTGCTGACACCCAGACAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 72 bp | TCATGGGTGTATCTCAGCACACATGTGGAGGTCAGATaGCAGCATGTGGGGGTCAGTTTTCTTCTTCAGAGA | + |
Preference number: 3 (lower is better) Translates to: SWVYLSTHVEVR*QHVGVSFLLQR Trigger: TCTCTGAAGAAGAAAACTGACCCCCACATGCTGTCATCTGACCTCCACATGTGTGCTGAGATACACCCATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR GCA 72 bp | TTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTGGTaGATTGGGCCTCTGTTGACGAACTACATGGTACAT | + |
Preference number: 3 (lower is better) Translates to: LRCFRACMLCGW*IGPLLTNYMVH Trigger: ATGTACCATGTAGTTCGTCAACAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR GCA 72 bp | GGTAGTACTTGTGGAGAAGAAATACCATGTAGCCACTaGCCCTCCCATTGCTCGCTGCTACAGTATCAAGTA | + |
Preference number: 3 (lower is better) Translates to: GSTCGEEIPCSH*PSHCSLLQYQV Trigger: TACTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACAAGTACTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATAGCTCTAGTTCCTaGGTACCTAAAACTCTCTTC | + |
Preference number: 3 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQYSSSS*VPKTLF Trigger: GAAGAGAGTTTTAGGTACCAAGGAACTAGAGCTATA...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCCCACTGCCCCTCCCATaGCTCGCTGCTACAGTATCA | + |
Preference number: 3 (lower is better) Translates to: RGNAQIPLETVENKCVYTPLPLP*LAATVS Trigger: TGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGG...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGAGGTACCTGTACAAATTaGGCAAACATTCACACATAC | + |
Preference number: 3 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRGTCTN*ANIHTY Trigger: GTATGTGTGAATGTTTGCCAAATTTGTACAGGTACC...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGATATAGCTCTAGTTCCTaGGTACCTAAAACTCTCTTC | + |
Preference number: 3 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRYSSSS*VPKTLF Trigger: GAAGAGAGTTTTAGGTACCAAGGAACTAGAGCTATA...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 72 bp | GCTGGCAAGCTCTATGTACCCACAGCTTCATACTTCTaGTTATATGAGGAACCAGCCATTAGCAGGATCCAC | + |
Preference number: 3 (lower is better) Translates to: AGKLYVPTASYF*LYEEPAISRIH Trigger: GTGGATCCTGCTAATGGCTGGTTCCTCATATAATCAGAAGTATGAAGCTGTGGGTACATAGAGCTTGCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR GCA 72 bp | GGTGGTGAAAAGACCTGCTCCTCTCTCAGAGACCTCTaGTTCCTTATTCAAAATCCACATCATAGGACTCAG | + |
Preference number: 3 (lower is better) Translates to: GGEKTCSSLRDL*FLIQNPHHRTQ Trigger: CTGAGTCCTATGATGTGGATTTTGAATAAGGAAGCAGAGGTCTCTGAGAGAGGAGCAGGTCTTTTCACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR GCA 72 bp | GAAGCACATTCTGTGTTTTTGCCCCAACCAATAACATaGCACCATATGGATCCAACCAGTCATTCTCCCTGG | + |
Preference number: 3 (lower is better) Translates to: EAHSVFLPQPIT*HHMDPTSHSPW Trigger: CCAGGGAGAATGACTGGTTGGATCCATATGGTGGCATGTTATTGGTTGGGGCAAAAACACAGAATGTGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CCA 72 bp | ATGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTaGGCCTCTGTTGACGAACTACATGGTACATATGTA | + |
Preference number: 3 (lower is better) Translates to: MFQGMYALWLVH*ASVDELHGTYV Trigger: TACATATGTACCATGTAGTTCGTCAACAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CCA 72 bp | TTATTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTaGTGCATTGGGCCTCTGTTGACGAACTACATGGTA | + |
Preference number: 3 (lower is better) Translates to: LLRCFRACMLCG*CIGPLLTNYMV Trigger: TACCATGTAGTTCGTCAACAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGCTTCAGTCACACTCCTaGATTCATTTTGAAAAGGAG | + |
Preference number: 3 (lower is better) Translates to: KKYHVATAPPIARCYSIKLQSHS*IHFEKE Trigger: CTCCTTTTCAAAATGAATCAAGGAGTGTGACTGAAG...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGGGTACCTGTACAAATTaGGCAAACATTCACACATAC | + |
Preference number: 3 (lower is better) Translates to: KKYHVATAPPIARCYSIKGTCTN*ANIHTY Trigger: GTATGTGTGAATGTTTGCCAAATTTGTACAGGTACC...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTAAGACTTCTCAAAGCCTaGATCCCCCAGTGTACATGG | + |
Preference number: 3 (lower is better) Translates to: IKGPTDVRGNAQIPLETVRLLKA*IPQCTW Trigger: CCATGTACACTGGGGGATCAAGGCTTTGAGAAGTCT...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 72 bp | CATCTCCAAGCATACAAGGACTGGCGCATGTTTATGTaGCCTATGAAACACCTTGTGGTGGACTTCCTTTCT | + |
Preference number: 3 (lower is better) Translates to: HLQAYKDWRMFM*PMKHLVVDFLS Trigger: AGAAAGGAAGTCCACCACAAGGTGTTTCATAGGTCACATAAACATGCGCCAGTCCTTGTATGCTTGGAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 72 bp | AGTTTAGGTCTCCTCAGAGCTTCAGTTTACCAGCATTaGTGTCTGAAAGGCAGTCATCTGCCTAAGCTACAG | + |
Preference number: 3 (lower is better) Translates to: SLGLLRASVYQH*CLKGSHLPKLQ Trigger: CTGTAGCTTAGGCAGATGACTGCCTTTCAGACATCAATGCTGGTAAACTGAAGCTCTGAGGAGACCTAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CCA 72 bp | ACATGCCACCATATGGATCCAACCAGTCATTCTCCCTaGGATATAAATATCCCCTTGCCCCTCCAAGAAAAA | + |
Preference number: 3 (lower is better) Translates to: TCHHMDPTSHSP*DINIPLPLQEK Trigger: TTTTTCTTGGAGGGGCAAGGGGATATTTATATCCCAGGGAGAATGACTGGTTGGATCCATATGGTGGCATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CCA 72 bp | CTAGATGGACAATTAAATCACTTCATGAGGGCAGAGTaGAGATCGAGGTGTCCCTGTCACTTTAAGAGACAG | + |
Preference number: 3 (lower is better) Translates to: LDGQLNHFMRAE*RSRCPCHFKRQ Trigger: CTGTCTCTTAAAGTGACAGGGACACCTCGATCTCCACTCTGCCCTCATGAAGTGATTTAATTGTCCATCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGTCTAGGAATCATATTTaGGTTCAGAACCCTCTATCT | + |
Preference number: 3 (lower is better) Translates to: KKYHVATAPPIARCYSIKSRNHI*VQNPLS Trigger: AGATAGAGGGTTCTGAACCAAAATATGATTCCTAGA...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | TTATTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTGGGCCTCTGTCTAGGAATCATATTTaGGTTCAGAACCCTCTATCT | + |
Preference number: 3 (lower is better) Translates to: LLRCFRACMLCGWCIGPLSRNHI*VQNPLS Trigger: AGATAGAGGGTTCTGAACCAAAATATGATTCCTAGA...CAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTACTGAGGAAAGAGTGTTaGTCCTTCTGGCTCTCTTGT | + |
Preference number: 3 (lower is better) Translates to: IKGPTDVRGNAQIPLETVLRKEC*SFWLSC Trigger: ACAAGAGAGCCAGAAGGACAAACACTCTTTCCTCAG...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCAGACTTCTCAAAGCCTaGATCCCCCAGTGTACATGG | + |
Preference number: 3 (lower is better) Translates to: RGNAQIPLETVENKCVYTRLLKA*IPQCTW Trigger: CCATGTACACTGGGGGATCAAGGCTTTGAGAAGTCT...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 72 bp | CGCAGCTATTTCAGGATGCAGGGGCAGATGGATCTCTaGTTTCCAGGCCATGTTGTTTTACATAATGAGTAT | + |
Preference number: 3 (lower is better) Translates to: RSYFRMQGQMDL*FPGHVVLHNEY Trigger: ATACTCATTATGTAAAACAACATGGCCTGGAAATCAGAGATCCATCTGCCCCTGCATCCTGAAATAGCTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
||
3UTR-3UTR CAA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCCTGAGGAAAGAGTGTTaGTCCTTCTGGCTCTCTTGT | + |
Preference number: 3 (lower is better) Translates to: RGNAQIPLETVENKCVYTLRKEC*SFWLSC Trigger: ACAAGAGAGCCAGAAGGACAAACACTCTTTCCTCAG...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CCA 72 bp | GGCTGGAGTGATACCTCAGTCATTAAGAGCACTGGCTaGCATTTAGCAGTTCAAGATTCAATTTCTAGGAAT | + |
Preference number: 3 (lower is better) Translates to: GWSDTSVIKSTG*HLAVQDSISRN Trigger: ATTCCTAGAAATTGAATCTTGAACTGCTAAATGCCAGCCAGTGCTCTTAATGACTGAGGTATCACTCCAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTATTCAGTTTACCAGCATaGATGTCTGAAAGGCAGTCA | + |
Preference number: 3 (lower is better) Translates to: IKGPTDVRGNAQIPLETVFSLPA*MSERQS Trigger: TGACTGCCTTTCAGACATCAATGCTGGTAAACTGAA...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTCTTCAGTCACACTCCTaGATTCATTTTGAAAAGGAG | + |
Preference number: 3 (lower is better) Translates to: YSLSHLSRPLSILNVEQPLQSHS*IHFEKE Trigger: CTCCTTTTCAAAATGAATCAAGGAGTGTGACTGAAG...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTTATAGCTCTAGTTCCTaGGTACCTAAAACTCTCTTC | + |
Preference number: 3 (lower is better) Translates to: YSLSHLSRPLSILNVEQPYSSSS*VPKTLF Trigger: GAAGAGAGTTTTAGGTACCAAGGAACTAGAGCTATA...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTACATGATAGGGAAATTTaGAAGATGAAAGCTGGCAAG | + |
Preference number: 3 (lower is better) Translates to: IKGPTDVRGNAQIPLETVHDREI*KMKAGK Trigger: CTTGCCAGCTTTCATCTTCAAAATTTCCCTATCATG...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTACATCTCTACGAAATATaGAGCACTGCCATGTACAAA | + |
Preference number: 3 (lower is better) Translates to: IKGPTDVRGNAQIPLETVHLYEI*STAMYK Trigger: TTTGTACATGGCAGTGCTCAATATTTCGTAGAGATG...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCGGTACCTGTACAAATTaGGCAAACATTCACACATAC | + |
Preference number: 3 (lower is better) Translates to: RGNAQIPLETVENKCVYTGTCTN*ANIHTY Trigger: GTATGTGTGAATGTTTGCCAAATTTGTACAGGTACC...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR TCA 72 bp | TGCCAAATCTCTTATGAGTTAACTGAATGGCATAACTaGTTTTTCCCCTCGTTGCCTTTACTTTCCCTTACT | + |
Preference number: 3 (lower is better) Translates to: CQISYELTEWHN*FFPSLPLLSLT Trigger: AGTAAGGGAAAGTAAAGGCAACGAGGGGAAAAATCAGTTATGCCATTCAGTTAACTCATAAGAGATTTGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTTATAGCTCTAGTTCCTaGGTACCTAAAACTCTCTTC | + |
Preference number: 3 (lower is better) Translates to: LAITVHLYEILSTAMYKIYSSSS*VPKTLF Trigger: GAAGAGAGTTTTAGGTACCAAGGAACTAGAGCTATA...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR-3UTR CAA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTTCTAGGAATCATATTTaGGTTCAGAACCCTCTATCT | + |
Preference number: 3 (lower is better) Translates to: LAITVHLYEILSTAMYKISRNHI*VQNPLS Trigger: AGATAGAGGGTTCTGAACCAAAATATGATTCCTAGA...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGATGCAGACTTTGGCCTaGGTCTGCTCCACCCAGATG | + |
Preference number: 4 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQMQTLA*VCSTQM Trigger: CATCTGGGTGGAGCAGACTCAGGCCAAAGTCTGCAT...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | TTATTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTGGGCCTCTGTGGCCTGGACCACAGTaGGGAAACTGCTGGTGCAGA | + |
Preference number: 4 (lower is better) Translates to: LLRCFRACMLCGWCIGPLWPGPQ*GNCWCR Trigger: TCTGCACCAGCAGTTTCCTCACTGTGGTCCAGGCCA...CAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGAATGCAGACTTTGGCCTaGGTCTGCTCCACCCAGATG | + |
Preference number: 4 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRMQTLA*VCSTQM Trigger: CATCTGGGTGGAGCAGACTCAGGCCAAAGTCTGCAT...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | TTATTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTGGGCCTCTGCCTCCCATGGCACCCTaGAACACTGCATCTCTCAGG | + |
Preference number: 4 (lower is better) Translates to: LLRCFRACMLCGWCIGPLPPMAP*NTASLR Trigger: CCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...CAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGCCTCCCATGGCACCCTaGAACACTGCATCTCTCAGG | + |
Preference number: 4 (lower is better) Translates to: KKYHVATAPPIARCYSIKPPMAP*NTASLR Trigger: CCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGAAAAAGTCCATCCCTGTaGATCAGCAGGAGGGGGCTG | + |
Preference number: 4 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRKSPSL*ISRRGL Trigger: CAGCCCCCTCCTGCTGATTCACAGGGATGGACTTTT...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGATCAGCAGGAGGGGGCTaGAAACTGCATAACCAAGGG | + |
Preference number: 4 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRSAGGG*KLHNQG Trigger: CCCTTGGTTATGCAGTTTCCAGCCCCCTCCTGCTGA...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | TTATTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTGGGCCTCTGAAAAGTCCATCCCTGTaGATCAGCAGGAGGGGGCTG | + |
Preference number: 4 (lower is better) Translates to: LLRCFRACMLCGWCIGPLKSPSL*ISRRGL Trigger: CAGCCCCCTCCTGCTGATTCACAGGGATGGACTTTT...CAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGTCAGCAGGAGGGGGCTaGAAACTGCATAACCAAGGG | + |
Preference number: 4 (lower is better) Translates to: KKYHVATAPPIARCYSIKSAGGG*KLHNQG Trigger: CCCTTGGTTATGCAGTTTCCAGCCCCCTCCTGCTGA...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR GCA 90 bp | TTATTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTGGGCCTCTGGAGGGGGCTGGAAACTaGATAACCAAGGGTCACAGA | + |
Preference number: 4 (lower is better) Translates to: LLRCFRACMLCGWCIGPLEGAGN*ITKGHR Trigger: TCTGTGACCCTTGGTTATGCAGTTTCCAGCCCCCTC...CAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR GCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGGAGGGGGCTGGAAACTaGATAACCAAGGGTCACAGA | + |
Preference number: 4 (lower is better) Translates to: KKYHVATAPPIARCYSIKEGAGN*ITKGHR Trigger: TCTGTGACCCTTGGTTATGCAGTTTCCAGCCCCCTC...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CCA 90 bp | ACCAAAGGGCAGCTGCAAAGCAGCCTTGGTCAGCTTCAGTCACACTCCTTGATTCTGATGATGATGGCCTaGACCACAGTGAGGAAACTG | + |
Preference number: 4 (lower is better) Translates to: TKGQLQSSLGQLQSHSLILMMMA*TTVRKL Trigger: CAGTTTCCTCACTGTGGTCCAGGCCATCATCATCAG...AATCAAGGAGTGTGACTGAAGCTGACCAAGGCTGCTTTGCAGCTGCCCTTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | TGTGGAGAAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGGGCTTCCCCACCAACTaGACATATAATGCACAGAAA | + |
Preference number: 4 (lower is better) Translates to: CGEEIPCSHCPSHCSLLQGFPTN*TYNAQK Trigger: TTTCTGTGCATTATATGTTCAGTTGGTGGGGAAGCC...CTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTTCTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGCTGATGATGATGGCCTaGACCACAGTGAGGAAACTG | + |
Preference number: 4 (lower is better) Translates to: KKYHVATAPPIARCYSIKLMMMA*TTVRKL Trigger: CAGTTTCCTCACTGTGGTCCAGGCCATCATCATCAG...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | ACCAAAGGGCAGCTGCAAAGCAGCCTTGGTCAGCTTCAGTCACACTCCTTGATTGGCTTCCCCACCAACTaGACATATAATGCACAGAAA | + |
Preference number: 4 (lower is better) Translates to: TKGQLQSSLGQLQSHSLIGFPTN*TYNAQK Trigger: TTTCTGTGCATTATATGTTCAGTTGGTGGGGAAGCC...AATCAAGGAGTGTGACTGAAGCTGACCAAGGCTGCTTTGCAGCTGCCCTTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTATGGCCTGGACCACAGTaGGGAAACTGCTGGTGCAGA | + |
Preference number: 4 (lower is better) Translates to: IKGPTDVRGNAQIPLETVWPGPQ*GNCWCR Trigger: TCTGCACCAGCAGTTTCCTCACTGTGGTCCAGGCCA...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 72 bp | AAAATAAGTGTGTGTACACCATGGTCCAAAGGTCATTaGGGGTCATGTGTCCTTTCCCTCCCTGGCCTGAGT | + |
Preference number: 4 (lower is better) Translates to: KISVCTPWSKGH*GSCVLSLPGLS Trigger: ACTCAGGCCAGGGAGGGAAAGGACACATGACCCCAAATGACCTTTGGACCATGGTGTACACACACTTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGGGCTTCCCCACCAACTaGACATATAATGCACAGAAA | + |
Preference number: 4 (lower is better) Translates to: KKYHVATAPPIARCYSIKGFPTN*TYNAQK Trigger: TTTCTGTGCATTATATGTTCAGTTGGTGGGGAAGCC...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTAATGCAGACTTTGGCCTaGGTCTGCTCCACCCAGATG | + |
Preference number: 4 (lower is better) Translates to: IKGPTDVRGNAQIPLETVMQTLA*VCSTQM Trigger: CATCTGGGTGGAGCAGACTCAGGCCAAAGTCTGCAT...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCCCTCCCATGGCACCCTaGAACACTGCATCTCTCAGG | + |
Preference number: 4 (lower is better) Translates to: RGNAQIPLETVENKCVYTPPMAP*NTASLR Trigger: CCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTAAAAGTCCATCCCTGTaGATCAGCAGGAGGGGGCTG | + |
Preference number: 4 (lower is better) Translates to: YSLSHLSRPLSILNVEQPKSPSL*ISRRGL Trigger: CAGCCCCCTCCTGCTGATTCACAGGGATGGACTTTT...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | TTATTGAGATGTTTCAGGGCATGTATGCTCTGTGGCTGGTGCATTGGGCCTCTGCTCAATGTCTCCCATTaGGAATGGCAACATTCAGTC | + |
Preference number: 4 (lower is better) Translates to: LLRCFRACMLCGWCIGPLLNVSH*EWQHSV Trigger: GACTGAATGTTGCCATTCTCAATGGGAGACATTGAG...CAGAGGCCCAATGCACCAGCCACAGAGCATACATGCCCTGAAACATCTCAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGCTCAATGTCTCCCATTaGGAATGGCAACATTCAGTC | + |
Preference number: 4 (lower is better) Translates to: KKYHVATAPPIARCYSIKLNVSH*EWQHSV Trigger: GACTGAATGTTGCCATTCTCAATGGGAGACATTGAG...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCGTGCCATGCAGACTTTaGCCTGAGTCTGCTCCACCC | + |
Preference number: 4 (lower is better) Translates to: RGNAQIPLETVENKCVYTVPCRL*PESAPP Trigger: GGGTGGAGCAGACTCAGGCCAAAGTCTGCATGGCAC...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTTCAGCAGGAGGGGGCTaGAAACTGCATAACCAAGGG | + |
Preference number: 4 (lower is better) Translates to: YSLSHLSRPLSILNVEQPSAGGG*KLHNQG Trigger: CCCTTGGTTATGCAGTTTCCAGCCCCCTCCTGCTGA...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTTGGCCTGGACCACAGTaGGGAAACTGCTGGTGCAGA | + |
Preference number: 4 (lower is better) Translates to: LAITVHLYEILSTAMYKIWPGPQ*GNCWCR Trigger: TCTGCACCAGCAGTTTCCTCACTGTGGTCCAGGCCA...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGAGAATATCCAAAAGAATaGGAAGAATGGAAGGATGTG | + |
Preference number: 4 (lower is better) Translates to: ATSSSQLKGSSVEKLGGREYPKE*EEWKDV Trigger: CACATCCTTCCATTCTTCTCATTCTTTTGGATATTC...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGAAGGGTCACAGATTCATaGATACTTACCATCAACAAA | + |
Preference number: 4 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRRVTDS*ILTINK Trigger: TTTGTTGATGGTAAGTATTCATGAATCTGTGACCCT...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR GCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCGAGGGGGCTGGAAACTaGATAACCAAGGGTCACAGA | + |
Preference number: 4 (lower is better) Translates to: RGNAQIPLETVENKCVYTEGAGN*ITKGHR Trigger: TCTGTGACCCTTGGTTATGCAGTTTCCAGCCCCCTC...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTCTGATGATGATGGCCTaGACCACAGTGAGGAAACTG | + |
Preference number: 4 (lower is better) Translates to: YSLSHLSRPLSILNVEQPLMMMA*TTVRKL Trigger: CAGTTTCCTCACTGTGGTCCAGGCCATCATCATCAG...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTGTGCCATGCAGACTTTaGCCTGAGTCTGCTCCACCC | + |
Preference number: 4 (lower is better) Translates to: LAITVHLYEILSTAMYKIVPCRL*PESAPP Trigger: GGGTGGAGCAGACTCAGGCCAAAGTCTGCATGGCAC...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTATGCAGACTTTGGCCTaGGTCTGCTCCACCCAGATG | + |
Preference number: 4 (lower is better) Translates to: LAITVHLYEILSTAMYKIMQTLA*VCSTQM Trigger: CATCTGGGTGGAGCAGACTCAGGCCAAAGTCTGCAT...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | AAGAAATACCATGTAGCCACTGCCCCTCCCATTGCTCGCTGCTACAGTATCAAGAGGGTCACAGATTCATaGATACTTACCATCAACAAA | + |
Preference number: 4 (lower is better) Translates to: KKYHVATAPPIARCYSIKRVTDS*ILTINK Trigger: TTTGTTGATGGTAAGTATTCATGAATCTGTGACCCT...CTTGATACTGTAGCAGCGAGCAATGGGAGGGGCAGTGGCTACATGGTATTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 72 bp | ATCATAGGACTCAGGATAGCCTATAGCTCTAGTTCCTaGGTACCTAAAACTCTCTTCAGGCCTGTATGGGTA | + |
Preference number: 4 (lower is better) Translates to: IIGLRIAYSSSS*VPKTLFRPVWV Trigger: TACCCATACAGGCCTGAAGAGAGTTTTAGGTACCAAGGAACTAGAGCTATAGGCTATCCTGAGTCCTATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTCTCAATGTCTCCCATTaGGAATGGCAACATTCAGTC | + |
Preference number: 4 (lower is better) Translates to: YSLSHLSRPLSILNVEQPLNVSH*EWQHSV Trigger: GACTGAATGTTGCCATTCTCAATGGGAGACATTGAG...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR GCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTGAGGGGGCTGGAAACTaGATAACCAAGGGTCACAGA | + |
Preference number: 4 (lower is better) Translates to: LAITVHLYEILSTAMYKIEGAGN*ITKGHR Trigger: TCTGTGACCCTTGGTTATGCAGTTTCCAGCCCCCTC...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 72 bp | GATCCTGAGTATGCAAATGAAGCACATTCTGTGTTTTaGCCCCAACCAATAACATGCCACCATATGGATCCA | + |
Preference number: 4 (lower is better) Translates to: DPEYANEAHSVF*PQPITCHHMDP Trigger: TGGATCCATATGGTGGCATGTTATTGGTTGGGGCAAAAACACAGAATGTGCTTCATTTGCATACTCAGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCGGCTTCCCCACCAACTaGACATATAATGCACAGAAA | + |
Preference number: 4 (lower is better) Translates to: RGNAQIPLETVENKCVYTGFPTN*TYNAQK Trigger: TTTCTGTGCATTATATGTTCAGTTGGTGGGGAAGCC...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTATCTCCAGGTAAACAATaGTCTTGCAGCCTATGTCAT | + |
Preference number: 4 (lower is better) Translates to: IKGPTDVRGNAQIPLETVSPGKQ*SCSLCH Trigger: ATGACATAGGCTGCAAGATCATTGTTTACCTGGAGA...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 72 bp | TCCCACCTTGCCATTACAGTTCATCTCTACGAAATATaGAGCACTGCCATGTACAAAATTTTCCTGTTAGTC | + |
Preference number: 4 (lower is better) Translates to: SHLAITVHLYEI*STAMYKIFLLV Trigger: GACTAACAGGAAAATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAGGTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCGAATATCCAAAAGAATaGGAAGAATGGAAGGATGTG | + |
Preference number: 4 (lower is better) Translates to: RGNAQIPLETVENKCVYTEYPKE*EEWKDV Trigger: CACATCCTTCCATTCTTCTCATTCTTTTGGATATTC...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | AGAGGAAATGCTCAGATACCATTGGAGACTGTAGAAAATAAGTGTGTGTACACCAGGGTCACAGATTCATaGATACTTACCATCAACAAA | + |
Preference number: 4 (lower is better) Translates to: RGNAQIPLETVENKCVYTRVTDS*ILTINK Trigger: TTTGTTGATGGTAAGTATTCATGAATCTGTGACCCT...GGTGTACACACACTTATTTTCTACAGTCTCCAATGGTATCTGAGCATTTCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 72 bp | AGAACAGGGCTTTACCATAAGAGCTGTGAGAATAACTaGAGCAATGGATGTTACCTACAGAGAACATTTTCA | + |
Preference number: 4 (lower is better) Translates to: RTGLYHKSCENN*SNGCYLQRTFS Trigger: TGAAAATGTTCTCTGTAGGTAACATCCATTGCTCAAGTTATTCTCACAGCTCTTATGGTAAAGCCCTGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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3UTR CAA 72 bp | AGTCAAATTACACAAACTGATTTAGAAGGTGTTGGTTaGTCTGGTTCTTTATGTCAGACACTTAGAACAGGG | + |
Preference number: 4 (lower is better) Translates to: SQITQTDLEGVG*SGSLCQTLRTG Trigger: CCCTGTTCTAAGTGTCTGACATAAAGAACCAGACAAACCAACACCTTCTAAATCAGTTTGTGTAATTTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR TCA 90 bp | CTTGCCATTACAGTTCATCTCTACGAAATATTGAGCACTGCCATGTACAAAATTGAATATCCAAAAGAATaGGAAGAATGGAAGGATGTG | + |
Preference number: 4 (lower is better) Translates to: LAITVHLYEILSTAMYKIEYPKE*EEWKDV Trigger: CACATCCTTCCATTCTTCTCATTCTTTTGGATATTC...AATTTTGTACATGGCAGTGCTCAATATTTCGTAGAGATGAACTGTAATGGCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS GCA 90 bp | AAATACCATGTAGCCACTGGCCCCTCCCATGGCACCCTGAAACACTaGATCTCTCAGGACCATGAGAGGGAGAACAATCCATTTGATTTC | + |
Preference number: 5 (lower is better) Translates to: KYHVATGPSHGTLKH*ISQDHERENNPFDF Trigger: GAAATCAAATGGATTGTTCTCCCTCTCATGGTCCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCTACATGGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000076180.2 ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CAA 90 bp | GCAACAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAGGTAGATCTCAATGTCTCCCATaGAGAATGGCAACATTCAGT | + |
Preference number: 5 (lower is better) Translates to: ATSSSQLKGSSVEKLGGRSQCLP*RMATFS Trigger: ACTGAATGTTGCCATTCTCAATGGGAGACATTGAGA...TCTACCTCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS GCA 90 bp | ATTAAACCATTGAATATCCAAAAGAATGAGAAGAATGGAAGGATGTaGCATGCAGACTTTGGCCTGAGTCTGCTCCACCCAGATGCTCTG | + |
Preference number: 5 (lower is better) Translates to: IKPLNIQKNEKNGRM*HADFGLSLLHPDAL Trigger: CAGAGCATCTGGGTGGAGCAGACTCAGGCCAAAGTCTGCATGGCACATCCTTCCATTCTTCTCATTCTTTTGGATATTCAATGGTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000076180.2 ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CAA 90 bp | ATTAAAGGTCCCACTGATGTGAGAGGAAATGCTCAGATACCATTGGAGACTGTATCTCAATGTCTCCCATaGAGAATGGCAACATTCAGT | + |
Preference number: 5 (lower is better) Translates to: IKGPTDVRGNAQIPLETVSQCLP*RMATFS Trigger: ACTGAATGTTGCCATTCTCAATGGGAGACATTGAGA...TACAGTCTCCAATGGTATCTGAGCATTTCCTCTCACATCAGTGGGACCTTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS-3UTR CAA 90 bp | TACTCTCTGAGTCATCTCTCACGTCCTCTGTCCATTCTTAATGTTGAACAACCTTCTCAATGTCTCCCATaGAGAATGGCAACATTCAGT | + |
Preference number: 5 (lower is better) Translates to: YSLSHLSRPLSILNVEQPSQCLP*RMATFS Trigger: ACTGAATGTTGCCATTCTCAATGGGAGACATTGAGA...AGGTTGTTCAACATTAAGAATGGACAGAGGACGTGAGAGATGACTCAGAGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS GCA 72 bp | TTGAATATCCAAAAGAATGAGAAGAATGGAAGGATGTaGCATGCAGACTTTGGCCTGAGTCTGCTCCACCCA | + |
Preference number: 6 (lower is better) Translates to: LNIQKNEKNGRM*HADFGLSLLHP Trigger: TGGGTGGAGCAGACTCAGGCCAAAGTCTGCATGGCACATCCTTCCATTCTTCTCATTCTTTTGGATATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000076180.2 ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |
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CDS TCA 72 bp | TATAGTAGAGAGAGACAGTTTCTCAATGTCTCCCATTaGGAATGGCAACATTCAGTCAAAAGTCCATCCCTG | + |
Preference number: 6 (lower is better) Translates to: YSRERQFLNVSH*EWQHSVKSPSL Trigger: CAGGGATGGACTTTTGACTGAATGTTGCCATTCTCAATGGGAGACATTGAGAAACTGTCTCTCTCTACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000076180.2 ENSMUST00000226845.2 ENSMUST00000227388.2 ENSMUST00000228113.2 ENSMUST00000228666.2 |