RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R218 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000115020

Ensembl transcript IDs: ENSMUST00000074992.2, ENSMUST00000226692.2, ENSMUST00000227050.2, ENSMUST00000227160.2, ENSMUST00000227741.2

Found 478 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTGTGCTAGGGAGCCTGCGGAATGGAGAGTCCTCTGGAGACCTTaGGGCCCTCTTCTGGGTTGGCACAGAAGATGGCTCAGGCTGGCC +
Preference number: 1 (lower is better)
Translates to: GCAREPAEWRVLWRP*GPLLGWHRRWLRLA
Trigger: GGCCAGCCTGAGCCATCTTCTGTGCCAACCCAGAAGAGGGCCCCAAGGTCTCCAGAGGACTCTCCATTCCGCAGGCTCCCTAGCACACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp CAAGGTCCTGGGTGTGCTAGGGAGCCTGCGGAATGGAGAGTCCTCTaGAGACCTTGGGGCCCTCTTCTGGGTTGGCACAGAAGATGGCTC +
Preference number: 1 (lower is better)
Translates to: QGPGCAREPAEWRVL*RPWGPLLGWHRRWL
Trigger: GAGCCATCTTCTGTGCCAACCCAGAAGAGGGCCCCAAGGTCTCCAGAGGACTCTCCATTCCGCAGGCTCCCTAGCACACCCAGGACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp GAGCCCTCCCTGGAGCCTGAATCTCTTTTGGCAAGGAAGGTGCCCTaGGGTCTGGGTCTCAGCTCTGCCTCCTGGCTGAGAATGAAGGCC +
Preference number: 1 (lower is better)
Translates to: EPSLEPESLLARKVP*GLGLSSASWLRMKA
Trigger: GGCCTTCATTCTCAGCCAGGAGGCAGAGCTGAGACCCAGACCCCAGGGCACCTTCCTTGCCAAAAGAGATTCAGGCTCCAGGGAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp GCGGAATGGAGAGTCCTCTGGAGACCTTGGGGCCCTCTTCTGGGTTaGCACAGAAGATGGCTCAGGCTGGCCCTAACCAGAACGAATCCC +
Preference number: 1 (lower is better)
Translates to: AEWRVLWRPWGPLLG*HRRWLRLALTRTNP
Trigger: GGGATTCGTTCTGGTTAGGGCCAGCCTGAGCCATCTTCTGTGCCAACCCAGAAGAGGGCCCCAAGGTCTCCAGAGGACTCTCCATTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp CAGAAGATGGCTCAGGCTGGCCCTAACCAGAACGAATCCCACCTCTaGTCAGGCAGGGTTCCTTTGCCCCTGTTCCTGCTGGCACAAGAC +
Preference number: 1 (lower is better)
Translates to: QKMAQAGPNQNESHL*SGRVPLPLFLLAQD
Trigger: GTCTTGTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGACCAGAGGTGGGATTCGTTCTGGTTAGGGCCAGCCTGAGCCATCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 90 bp ATCTCTTTTGGCAAGGAAGGTGCCCTGGGGTCTGGGTCTCAGCTCTaGCTCCTGGCTGAGAATGAAGGCCCGAAGGGTCCCTATCCAAGA +
Preference number: 1 (lower is better)
Translates to: ISFGKEGALGSGSQL*LLAENEGPKGPYPR
Trigger: TCTTGGATAGGGACCCTTCGGGCCTTCATTCTCAGCCAGGAGGCAGAGCTGAGACCCAGACCCCAGGGCACCTTCCTTGCCAAAAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 90 bp CTATCCAAGAAGCTCTGTTGCTTCTGCTGCCCACATGCTCTCAAGTaGTCCCAAGGTCCTGGGTGTGCTAGGGAGCCTGCGGAATGGAGA +
Preference number: 1 (lower is better)
Translates to: LSKKLCCFCCPHALK*SQGPGCAREPAEWR
Trigger: TCTCCATTCCGCAGGCTCCCTAGCACACCCAGGACCTTGGGATCACTTGAGAGCATGTGGGCAGCAGAAGCAACAGAGCTTCTTGGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 90 bp GCCCTAACCAGAACGAATCCCACCTCTGGTCAGGCAGGGTTCCTTTaGCCCTGTTCCTGCTGGCACAAGACCCTCCAGGATTCTTTGAAA +
Preference number: 1 (lower is better)
Translates to: ALTRTNPTSGQAGFL*PCSCWHKTLQDSLK
Trigger: TTTCAAAGAATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGACCAGAGGTGGGATTCGTTCTGGTTAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp CCTCTGTCAGCACTCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTaGTCAGAGTACTCTCTGCAGGCAAGCTCTCCTCTTGCAGGAAAG +
Preference number: 1 (lower is better)
Translates to: PLSALLGVHLSPEFQ*SEYSLQASSPLAGK
Trigger: CTTTCCTGCAAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGAGTGCTGACAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp AACCTTGGCTTCACCAACCAGATCCCCGGTGCTCCCTCAGCACTGTaGTTCCCTTGTCTGTGGGACAACAGGGTACATCTCCATAGCATA +
Preference number: 1 (lower is better)
Translates to: NLGFTNQIPGAPSAL*FPCLWDNRVHLHSI
Trigger: TATGCTATGGAGATGTACCCTGTTGTCCCACAGACAAGGGAACCACAGTGCTGAGGGAGCACCGGGGATCTGGTTGGTGAAGCCAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 90 bp ATTCTGTTAGCCTCTGTCAGCACTCCTGGGAGTCCACCTCTCACCTaGGTTTCAGTGGTCAGAGTACTCTCTGCAGGCAAGCTCTCCTCT +
Preference number: 1 (lower is better)
Translates to: ILLASVSTPGSPPLT*VSVVRVLSAGKLSS
Trigger: AGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGAGTGCTGACAGAGGCTAACAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 90 bp CTTAACAAGGATATACAACCTTGGCTTCACCAACCAGATCCCCGGTaGTCCCTCAGCACTGTGGTTCCCTTGTCTGTGGGACAACAGGGT +
Preference number: 1 (lower is better)
Translates to: LNKDIQPWLHQPDPR*SLSTVVPLSVGQQG
Trigger: ACCCTGTTGTCCCACAGACAAGGGAACCACAGTGCTGAGGGAGCACCGGGGATCTGGTTGGTGAAGCCAAGGTTGTATATCCTTGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 90 bp ACGAATCCCACCTCTGGTCAGGCAGGGTTCCTTTGCCCCTGTTCCTaGTGGCACAAGACCCTCCAGGATTCTTTGAAATTGATGTTGAGG +
Preference number: 1 (lower is better)
Translates to: TNPTSGQAGFLCPCS*WHKTLQDSLKLMLR
Trigger: CCTCAACATCAATTTCAAAGAATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGACCAGAGGTGGGATTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp AATCCCACCTCTGGTCAGGCAGGGTTCCTTTGCCCCTGTTCCTGCTaGCACAAGACCCTCCAGGATTCTTTGAAATTGATGTTGAGGTCC +
Preference number: 1 (lower is better)
Translates to: NPTSGQAGFLCPCSC*HKTLQDSLKLMLRS
Trigger: GGACCTCAACATCAATTTCAAAGAATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGACCAGAGGTGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp GAAAGATGTCCAGAAGTCTATAGCTCAGAGCCACTTCCTGAGTCCTaGGGTCTGAGCCCTCCCTGGAGCCTGAATCTCTTTTGGCAAGGA +
Preference number: 1 (lower is better)
Translates to: ERCPEVYSSEPLPES*GLSPPWSLNLFWQG
Trigger: TCCTTGCCAAAAGAGATTCAGGCTCCAGGGAGGGCTCAGACCCCAGGACTCAGGAAGTGGCTCTGAGCTATAGACTTCTGGACATCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp GCTGGCATATGCAATAGTCTCTGCATTTGGTGGCTGATAATGGGATaGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTC +
Preference number: 1 (lower is better)
Translates to: AGICNSLCIWWLIMG*IPQWGSLWMVHPFV
Trigger: GACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCATTATCAGCCACCAAATGCAGAGACTATTGCATATGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 90 bp TGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTaGAGGCAAGCTCTCCTCTTGCAGGAAAGATGTCCAGAAGTCTAT +
Preference number: 1 (lower is better)
Translates to: WESTSHLSFSGQSTL*RQALLLQERCPEVY
Trigger: ATAGACTTCTGGACATCTTTCCTGCAAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp GGAGCTTATTCCTCCTGTAATTCTGTTAGCCTCTGTCAGCACTCCTaGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTC +
Preference number: 1 (lower is better)
Translates to: GAYSSCNSVSLCQHS*ESTSHLSFSGQSTL
Trigger: GAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGAGTGCTGACAGAGGCTAACAGAATTACAGGAGGAATAAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp ATTTGGTGGCTGATAATGGGATGGATCCCCCAGTGGGGCAGTCTCTaGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGTA +
Preference number: 1 (lower is better)
Translates to: IWWLIMGWIPQWGSL*MVHPFVSAPNFDSV
Trigger: TACAGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCATTATCAGCCACCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 90 bp TGCTCCAGTGACTTCACTTGTCTCACTGTCATCTTCATTCTGCCCTaGAAGCTCAGATCAGATAAGTCACCTCTTCATGTCCAGCTATGC +
Preference number: 1 (lower is better)
Translates to: CSSDFTCLTVIFILP*KLRSDKSPLHVQLC
Trigger: GCATAGCTGGACATGAAGAGGTGACTTATCTGATCTGAGCTTGCAGGGCAGAATGAAGATGACAGTGAGACAAGTGAAGTCACTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp TCTTCCAGGCTTTCCCCCACTTTCTCCTCTATAAGTTTCAGAGTCTaGGGTTTTATGTGGAGTTCCTTGATCCACTTAAGCTTGAGCTTT +
Preference number: 1 (lower is better)
Translates to: SSRLSPTFSSISFRV*GFMWSSLIHLSLSF
Trigger: AAAGCTCAAGCTTAAGTGGATCAAGGAACTCCACATAAAACCCCAGACTCTGAAACTTATAGAGGAGAAAGTGGGGGAAAGCCTGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp CCATGTATGATAATTGAGAGTTTTGCTGGGTATAATAGCCTGGGCTaGCATTTGTGTTCTCTTTGGATCTGTATTACCTCTGTCCAGGAT +
Preference number: 1 (lower is better)
Translates to: PCMIIESFAGYNSLG*HLCSLWICITSVQD
Trigger: ATCCTGGACAGAGGTAATACAGATCCAAAGAGAACACAAATGCCAGCCCAGGCTATTATACCCAGCAAAACTCTCAATTATCATACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp GATGGCTTTAGCTCCTTTGCCAAAGATCAAGTGACCATAGGTGTGTaGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATCTACCTG +
Preference number: 1 (lower is better)
Translates to: DGFSSFAKDQVTIGV*VHFCVLKSIPLIYL
Trigger: CAGGTAGATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACTTGATCTTTGGCAAAGGAGCTAAAGCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 90 bp GAGTGTTACTCTTTCTCCACATCCTTGTCAGCATCTGCTGTCACCTaGATTTTTGATCTTAGCTATTCTGAATGGTATGAGGTGGAATCT +
Preference number: 1 (lower is better)
Translates to: ECYSFSTSLSASAVT*IFDLSYSEWYEVES
Trigger: AGATTCCACCTCATACCATTCAGAATAGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGACAAGGATGTGGAGAAAGAGTAACACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp GCAGCTTTAGAGAGCAGTTCAATTGCTCTACCTGAAAGATCTGTTTaGATTTTTCTGTTTATTCTGAGGAGGATCTGCAGTGGCTATAAA +
Preference number: 1 (lower is better)
Translates to: AALESSSIALPERSV*IFLFILRRICSGYK
Trigger: TTTATAGCCACTGCAGATCCTCCTCAGAATAAACAGAAAAATCCAAACAGATCTTTCAGGTAGAGCAATTGAACTGCTCTCTAAAGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp CTCACTGTGGTGGGCATAGTGGGTTCTGATGATGCCCAGTGGTCTTaGTTTCTGTTAGTAATATTCTTTGTTTGTTTGTTTGTTTGTTTT +
Preference number: 1 (lower is better)
Translates to: LTVVGIVGSDDAQWS*FLLVIFFVCLFVCF
Trigger: AAAACAAACAAACAAACAAACAAAGAATATTACTAACAGAAACCAAGACCACTGGGCATCATCAGAACCCACTATGCCCACCACAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 90 bp ATTTGCATTTCCCTGATGATTAAGGATGTTGAACACTTTTTCAGGTaGTTCTCAGCCATTCAGTATGCCTCAGTTGAGAATTCTTTGCTT +
Preference number: 1 (lower is better)
Translates to: ICISLMIKDVEHFFR*FSAIQYASVENSLL
Trigger: AAGCAAAGAATTCTCAACTGAGGCATACTGAATGGCTGAGAAGCACCTGAAAAAGTGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp CCAACTTTCCCTTCTTTACTATTACTGACAAGGTTTTTCCTCCTGTaGTTAACTAGGATATTTAATGGGGTAGATTCAGTCTGTCCAATG +
Preference number: 1 (lower is better)
Translates to: PTFPSLLLLTRFFLL*LTRIFNGVDSVCPM
Trigger: CATTGGACAGACTGAATCTACCCCATTAAATATCCTAGTTAACCACAGGAGGAAAAACCTTGTCAGTAATAGTAAAGAAGGGAAAGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 90 bp TGCTCACAGCAGAGATTTAGGCTTGTAATTGAGCCATATCATGAGTaGTATCATTGTCCTTCCAAATTCCCTCATTTTAATTACAGAGGA +
Preference number: 1 (lower is better)
Translates to: CSQQRFRLVIEPYHE*YHCPSKFPHFNYRG
Trigger: TCCTCTGTAATTAAAATGAGGGAATTTGGAAGGACAATGATATCACTCATGATATGGCTCAATTACAAGCCTAAATCTCTGCTGTGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 90 bp GTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTAAGTaGGTTATTAATGCCCTTCTTAAAATCCTCTACCGCCATCATGAG +
Preference number: 1 (lower is better)
Translates to: VFSCNSLRASLYFFK*VINALLKILYRHHE
Trigger: CTCATGATGGCGGTAGAGGATTTTAAGAAGGGCATTAATAACTCACTTAAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp GACAAAGAATCCACACTTTGGTTTTCCTTCTTCTTGCGTTTCATGTaGTTTGCAAATTGTATTCTAAGTTTCTGGGCTAATATCCGCTTA +
Preference number: 1 (lower is better)
Translates to: DKESTLWFSFFLRFM*FANCILSFWANIRL
Trigger: TAAGCGGATATTAGCCCAGAAACTTAGAATACAATTTGCAAACCACATGAAACGCAAGAAGAAGGAAAACCAAAGTGTGGATTCTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 90 bp ATTGACAGTGTCTTTTGCCTTATAGATAGATCCTTTGTAATTTTATaGGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTG +
Preference number: 1 (lower is better)
Translates to: IDSVFCLIDRSFVIL*GPICRFLILQHKPL
Trigger: CAATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACAAAGGATCTATCTATAAGGCAAAAGACACTGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp GGCGTTCTAATTATTATGTGTTCGGAGGTCTATTTGGAGTCTATTTaGAATTCTATTTGGAGGTCTATTTGGAGTCTATTTGGAGTTCTA +
Preference number: 1 (lower is better)
Translates to: GVLIIMCSEVYLESI*NSIWRSIWSLFGVL
Trigger: TAGAACTCCAAATAGACTCCAAATAGACCTCCAAATAGAATTCCAAATAGACTCCAAATAGACCTCCGAACACATAATAATTAGAACGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 90 bp AGGGCTGGATTCATGGAAAGATATTGTGTGAATTTGGTTTTGTCATaGAATACCTTGGTTTCTCCATGTATGATAATTGAGAGTTTTGCT +
Preference number: 1 (lower is better)
Translates to: RAGFMERYCVNLVLS*NTLVSPCMIIESFA
Trigger: AGCAAAACTCTCAATTATCATACATGGAGAAACCAAGGTATTCCATGACAAAACCAAATTCACACAATATCTTTCCATGAATCCAGCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp TGCGGAATGGAGAGTCCTCTGGAGACCTTGGGGCCCTCTTCTGGGTaGGCACAGAAGATGGCTCAGGCTGGCCCTAACCAGAACGAATCC +
Preference number: 2 (lower is better)
Translates to: CGMESPLETLGPSSG*AQKMAQAGPNQNES
Trigger: GGATTCGTTCTGGTTAGGGCCAGCCTGAGCCATCTTCTGTGCCAACCCAGAAGAGGGCCCCAAGGTCTCCAGAGGACTCTCCATTCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCTCAGAGCCACTTCCTaGGTCCTGGGGTCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGLRATS*VLGSEP
Trigger: GGGCTCAGACCCCAGGACTCAGGAAGTGGCTCTGAG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGCTCAGAGCCACTTCCTaGGTCCTGGGGTCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRLRATS*VLGSEP
Trigger: GGGCTCAGACCCCAGGACTCAGGAAGTGGCTCTGAG...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTTTGCCCCTGTTCCTaGTGGCACAAGACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQLCPCS*WHKTLQ
Trigger: CTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGCTCCCTCAGCACTGTaGTTCCCTTGTCTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQAPSAL*FPCLWD
Trigger: GTCCCACAGACAAGGGAACCACAGTGCTGAGGGAGC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCAGCTCTGCCTCCTaGCTGAGAATGAAGGCCCGA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQLSSAS*LRMKAR
Trigger: TCGGGCCTTCATTCTCAGCCAGGAGGCAGAGCTGAG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTAGGTGCCCTGGGGTCTaGGTCTCAGCTCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGRCPGV*VSALPP
Trigger: AGGAGGCAGAGCTGAGACCCAGACCCCAGGGCACCT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCAGGCAGGGTTCCTTTaGCCCTGTTCCTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGQAGFL*PCSCWH
Trigger: GTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGCAGGCAGGGTTCCTTTaGCCCTGTTCCTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRQAGFL*PCSCWH
Trigger: GTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTG...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp GGCCCTAACCAGAACGAATCCCACCTCTGGTCAGGCAGGGTTCCTTaGCCCCTGTTCCTGCTGGCACAAGACCCTCCAGGATTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: GPNQNESHLWSGRVP*PLFLLAQDPPGFFE
Trigger: TTCAAAGAATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGACCAGAGGTGGGATTCGTTCTGGTTAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGAGAGGGAGGAAGCAGTaGGCCATTCAGAGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQRGRKQ*AIQRSR
Trigger: TCTGCTTCTCTGAATGGCTCACTGCTTCCTCCCTCT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCTCAGAGCCACTTCCTaGGTCCTGGGGTCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSLRATS*VLGSEP
Trigger: GGGCTCAGACCCCAGGACTCAGGAAGTGGCTCTGAG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGTCTGGGTCTCAGCTCTaGCTCCTGGCTGAGAATGAA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQSGSQL*LLAENE
Trigger: TTCATTCTCAGCCAGGAGGCAGAGCTGAGACCCAGA...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGGTCAGAGTACTCTCTaGAGGCAAGCTCTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQGQSTL*RQALLL
Trigger: CAAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGCTCCCTCAGCACTGTaGTTCCCTTGTCTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRAPSAL*FPCLWD
Trigger: GTCCCACAGACAAGGGAACCACAGTGCTGAGGGAGC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGGAGAGTTTCACTCTTaGACCAGGGAAGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQGEFHS*TREGGQ
Trigger: CTGACCTCCTTCCCTGGTCCAAGAGTGAAACTCTCC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGTCCTCTGGGGATCTTaGGGCCCTCTGCCACATTTG +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRVLWGS*GPLPHL
Trigger: CAAATGTGGCAGAGGGCCCCAAGATCCCCAGAGGAC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGTCCTCTGGGGATCTTaGGGCCCTCTGCCACATTTG +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGVLWGS*GPLPHL
Trigger: CAAATGTGGCAGAGGGCCCCAAGATCCCCAGAGGAC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGTGCCCCTGTTCCTGCTaGCACAAGACCCTCCAGGAT +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRCPCSC*HKTLQD
Trigger: ATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCA...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGGCCCTCTTCTGGGTTaGCACAGAAGATGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRGPLLG*HRRWLR
Trigger: CCTGAGCCATCTTCTGTGCCAACCCAGAAGAGGGCC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCTTGGGGCCCTCTTCTaGGTTGGCACAGAAGATGGC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGLGALF*VGTEDG
Trigger: GCCATCTTCTGTGCCAACCCAGAAGAGGGCCCCAAG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTAGGGAGCCTGCGGAATaGAGAGTCCTCTGGAGACCT +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGREPAE*RVLWRP
Trigger: AGGTCTCCAGAGGACTCTCCATTCCGCAGGCTCCCT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGAGCCTGAATCTCTTTTaGCAAGGAAGGTGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQSLNLF*QGRCPG
Trigger: CCCAGGGCACCTTCCTTGCCAAAAGAGATTCAGGCT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp TGGCTGAGAATGAAGGCCCGAAGGGTCCCTATCCAAGAAGCTCTGTaGCTTCTGCTGCCCACATGCTCTCAAGTGATCCCAAGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: WLRMKARRVPIQEAL*LLLPTCSQVIPRSW
Trigger: CCAGGACCTTGGGATCACTTGAGAGCATGTGGGCAGCAGAAGCAACAGAGCTTCTTGGATAGGGACCCTTCGGGCCTTCATTCTCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGAGTGTCCTGCTCCAGTaGCTTCACTTGTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQSVLLQ*LHLSHC
Trigger: ACAGTGAGACAAGTGAAGTCACTGGAGCAGGACACT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGAATGGAGAGTCCTCTaGAGACCTTGGGGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGEWRVL*RPWGPL
Trigger: AAGAGGGCCCCAAGGTCTCCAGAGGACTCTCCATTC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCCTGTGTCCCTGAGGTaGGTTTCCTGTATACAGCAA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQPVSLR*VSCIQQ
Trigger: TTGCTGTATACAGGAAACCCACCTCAGGGACACAGG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGAGCCGAAGCCACCTGTaGAGAAGAGAGATCAAGCGT +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRSRSHL*RREIKR
Trigger: ACGCTTGATCTCTCTTCTTCACAGGTGGCTTCGGCT...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGAGGCACAGCATACCTaGATAGCAACCACAGCAAGC +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCREAQHT*IATTAS
Trigger: GCTTGCTGTGGTTGCTATGCAGGTATGCTGTGCCTC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGTCTGGGTCTCAGCTCTaGCTCCTGGCTGAGAATGAA +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRSGSQL*LLAENE
Trigger: TTCATTCTCAGCCAGGAGGCAGAGCTGAGACCCAGA...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTACTCAGAAATCTGCCTaGCTCTGTCTCCCAAGTGCC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGTQKSA*LCLPSA
Trigger: GGCACTTGGGAGACAGAGGCAGGCAGATTTCTGAGT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTGTGCCAGTGAGGCCTaGCCAGAAGCATGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSCASEA*PEAWSP
Trigger: TGGAGACCATGCTTCTGGCCAGGCCTCACTGGCACA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCGCTCCCTCAGCACTGTaGTTCCCTTGTCTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISAPSAL*FPCLWD
Trigger: GTCCCACAGACAAGGGAACCACAGTGCTGAGGGAGC...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGTGAACAGGCTTTCATaGTCCTTCATCCCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQVNRLS*SFIPSG
Trigger: TCCTGAAGGGATGAAGGACCATGAAAGCCTGTTCAC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGGAGAGTTTCACTCTTaGACCAGGGAAGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRGEFHS*TREGGQ
Trigger: CTGACCTCCTTCCCTGGTCCAAGAGTGAAACTCTCC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGGTTGGCACAGAAGATaGCTCAGGCTGGCCCTAACC +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSGWHRR*LRLALT
Trigger: GGTTAGGGCCAGCCTGAGCCATCTTCTGTGCCAACC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGACCAGTTGGAACATCTaGATATATGCCCAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQTSWNI*IYAQER
Trigger: CCTCTCCTGGGCATATATCCAGATGTTCCAACTGGT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGATGTTGCCCTTGCATTaGTGCAGCATAGGCCATATT +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQMLPLH*CSIGHI
Trigger: AATATGGCCTATGCTGCAGCAATGCAAGGGCAACAT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGTCATGGCAGAGGGCATaGTCCTCACCACCTTTTTGT +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRSWQRA*SSPPFC
Trigger: ACAAAAAGGTGGTGAGGAGCATGCCCTCTGCCATGA...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGGCAAGCTCTCCTCTTaGAGGAAAGATGTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGGKLSS*RKDVQK
Trigger: CTTCTGGACATCTTTCCTGCAAGAGGAGAGCTTGCC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTGCAACCCCAGCATTTaGCATCCCAAGGTACCTCAA +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGCNPSI*HPKVPQ
Trigger: TTGAGGTACCTTGGGATGCCAAATGCTGGGGTTGCA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGACAGAGGAAGTCAAATaGGGGGAAAAATCAGCGTGT +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQTEEVK*GEKSAC
Trigger: ACACGCTGATTTTTCCCCCCATTTGACTTCCTCTGT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGAATGGAGAGTCCTCTaGAGACCTTGGGGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSEWRVL*RPWGPL
Trigger: AAGAGGGCCCCAAGGTCTCCAGAGGACTCTCCATTC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGATTTTCGGTTGTGTTaGAGTATCCAGGACTCACTG +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQDFRLC*SIQDSL
Trigger: CAGTGAGTCCTGGATACTCCAACACAACCGAAAATC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTTGAGGATGTGGGGTTaGTGCAATTTCTTGACCCTC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGLRMWG*CNFLTL
Trigger: GAGGGTCAAGAAATTGCATCAACCCCACATCCTCAA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCAGCCGAAGCCACCTGTaGAGAAGAGAGATCAAGCGT +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISSRSHL*RREIKR
Trigger: ACGCTTGATCTCTCTTCTTCACAGGTGGCTTCGGCT...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGGAATCTTCTGCACCTaGTTCTCTCTCTTCCATCTC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGGIFCT*FSLFHL
Trigger: GAGATGGAAGAGAGAGAATCAGGTGCAGAAGATTCC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGCATGGTCTCCAGACCTaGAATGCACCATGTAAGAGA +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRHGLQT*NAPCKR
Trigger: TCTCTTACATGGTGCATTGCAGGTCTGGAGACCATG...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCGAGGCACAGCATACCTaGATAGCAACCACAGCAAGC +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISEAQHT*IATTAS
Trigger: GCTTGCTGTGGTTGCTATGCAGGTATGCTGTGCCTC...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGGTCAGAGTACTCTCTaGAGGCAAGCTCTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSGQSTL*RQALLL
Trigger: CAAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGAATTTCTTGACCCTCTaGGTCCTTCATTGCAGGATA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQNFLTL*VLHCRI
Trigger: TATCCTGCAATGAAGGACCCAGAGGGTCAAGAAATT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCCTGGAAGAGAGTATTaGCATTTTTCCATGCAAGCT +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQPGREY*HFSMQA
Trigger: AGCTTGCATGGAAAAATGCCAATACTCTCTTCCAGG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGTCTGGGGTTTTATGTaGAGTTCCTTGATCCACTTA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQVWGFM*SSLIHL
Trigger: TAAGTGGATCAAGGAACTCCACATAAAACCCCAGAC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTCTTGGCAGCACCAATaGATATCCTGCTGCTTAACA +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGSWQHQ*ISCCLT
Trigger: TGTTAAGCAGCAGGATATTCATTGGTGCTGCCAAGA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGTTGATGCAATTTCTTaGCCCTCTGGGTCCTTCATT +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRVDAIS*PSGSFI
Trigger: AATGAAGGACCCAGAGGGTCAAGAAATTGCATCAAC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCCAAAGGTAATAGACTaGGCCAAATCTACTACATCA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQPKVID*AKSTTS
Trigger: TGATGTAGTAGATTTGGCTCAGTCTATTACCTTTGG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGAAATCCACCTCCAATaGCACACATGTAGCCATATG +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCREIHLQ*HTCSHM
Trigger: CATATGGCTACATGTGTGTCATTGGAGGTGGATTTC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGTTTCATAGTCTCTGGTaGGAAGTCTGGTGTAATTCT +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQFHSLW*EVWCNS
Trigger: AGAATTACACCAGACTTCTCACCAGAGACTATGAAA...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGCATCTGCTGTCACCTaGATTTTTGATCTTAGCTAT +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQASAVT*IFDLSY
Trigger: ATAGCTAAGATCAAAAATTCAGGTGACAGCAGATGC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCACCATGTCTGCCTATaGTACCTAGAAAACATGTCC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGHHVCL*YLENMS
Trigger: GGACATGTTTTCTAGGTAGCATAGGCAGACATGGTG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGCACCATGTCTGCCTATaGTACCTAGAAAACATGTCC +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRHHVCL*YLENMS
Trigger: GGACATGTTTTCTAGGTAGCATAGGCAGACATGGTG...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGATGTTGCCCTTGCATTaGTGCAGCATAGGCCATATT +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRMLPLH*CSIGHI
Trigger: AATATGGCCTATGCTGCAGCAATGCAAGGGCAACAT...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCTCATGGCAGAGGGCATaGTCCTCACCACCTTTTTGT +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISSWQRA*SSPPFC
Trigger: ACAAAAAGGTGGTGAGGAGCATGCCCTCTGCCATGA...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGATTAAACACGTGCTTTaGTCACAGCAGAGATTTAGG +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQIKHVL*SQQRFR
Trigger: CCTAAATCTCTGCTGTGAGCAAAGCACGTGTTTAAT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCCGCTTATCAGTGAGTaGATATCATGTGAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQPLISE*ISCEFF
Trigger: AAAGAACTCACATGATATGCACTCACTGATAAGCGG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTAAGGATATACAACCTTaGCTTCACCAACCAGATCCC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGKDIQP*LHQPDP
Trigger: GGGATCTGGTTGGTGAAGCCAAGGTTGTATATCCTT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGTCTCGCTTAAGATCTTaGCCTAAGCTACCAGGAACA +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRSRLRS*PKLPGT
Trigger: TGTTCCTGGTAGCTTAGGCCAAGATCTTAAGCGAGA...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCCTGTGTCCCTGAGGTaGGTTTCCTGTATACAGCAA +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSPVSLR*VSCIQQ
Trigger: TTGCTGTATACAGGAAACCCACCTCAGGGACACAGG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGTACAGCACAAGCCATTaGTGTTCTGTTCAGGAATTT +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQYSTSH*CSVQEF
Trigger: AAATTCCTGAACAGAACACCAATGGCTTGTGCTGTA...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTTAGCTATTCTGAATaGTATGAGGTGGAATCTCAG +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQLSYSE*YEVESQ
Trigger: CTGAGATTCCACCTCATACCATTCAGAATAGCTAAG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp TTCCTTTGCCCCTGTTCCTGCTGGCACAAGACCCTCCAGGATTCTTaGAAATTGATGTTGAGGTCCACTTGCCCATTATTCCGAGACCTG +
Preference number: 2 (lower is better)
Translates to: FLCPCSCWHKTLQDS*KLMLRSTCPLFRDL
Trigger: CAGGTCTCGGAATAATGGGCAAGTGGACCTCAACATCAATTTCAAAGAATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCATTGCAGGATACTGTaGGTTCTTGGCAGCACCAAT +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSHCRIL*VLGSTN
Trigger: ATTGGTGCTGCCAAGAACTCACAGTATCCTGCAATG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTTGAGGATGTGGGGTTaGTGCAATTTCTTGACCCTC +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSLRMWG*CNFLTL
Trigger: GAGGGTCAAGAAATTGCATCAACCCCACATCCTCAA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTTTTTCTGTTTATTCTaGGGAGGATCTGCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGFFCLF*GGSAVA
Trigger: AGCCACTGCAGATCCTCCTCAGAATAAACAGAAAAA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGTTTTTCTGTTTATTCTaGGGAGGATCTGCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRFFCLF*GGSAVA
Trigger: AGCCACTGCAGATCCTCCTCAGAATAAACAGAAAAA...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGACTGTTGTTAATAGCTaGGTAGTACTCCATTGTGTA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQTVVNS*VVLHCV
Trigger: TACACAATGGAGTACTACTCAGCTATTAACAACAGT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCACAGGCCACCATGTCTaGCTATGCTACCTAGAAAAC +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISTGHHV*LCYLEN
Trigger: GTTTTCTAGGTAGCATAGGCAGACATGGTGGCCTGT...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTACAGGCCACCATGTCTaGCTATGCTACCTAGAAAAC +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSTGHHV*LCYLEN
Trigger: GTTTTCTAGGTAGCATAGGCAGACATGGTGGCCTGT...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCCTGTCATCTTCATTCTaGCCTGCAAGCTCAGATCAG +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISLSSSF*PASSDQ
Trigger: CTGATCTGAGCTTGCAGGGCAGAATGAAGATGACAG...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCCATGGTCTCCAGACCTaGAATGCACCATGTAAGAGA +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISHGLQT*NAPCKR
Trigger: TCTCTTACATGGTGCATTGCAGGTCTGGAGACCATG...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGCCTTTCCAATCTCTTaGTTTAGTCTGGAGAGTTTC +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRAFPIS*FSLESF
Trigger: GAAACTCTCCAGACTAAAGCAAGAGATTGGAAAGGC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGCCTTTCCAATCTCTTaGTTTAGTCTGGAGAGTTTC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGAFPIS*FSLESF
Trigger: GAAACTCTCCAGACTAAAGCAAGAGATTGGAAAGGC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGAACATCTGGATATATaGCCAGGAGAGGTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSEHLDI*PGEVLL
Trigger: CAGCAACACCTCTCCTGGGCATATATCCAGATGTTC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTAATTTCTTGACCCTCTaGGTCCTTCATTGCAGGATA +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGNFLTL*VLHCRI
Trigger: TATCCTGCAATGAAGGACCCAGAGGGTCAAGAAATT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGTGAACAGGCTTTCATaGTCCTTCATCCCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSVNRLS*SFIPSG
Trigger: TCCTGAAGGGATGAAGGACCATGAAAGCCTGTTCAC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGATTTCCTGGATGTTTTaGGTTAGGGTGTTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQISWMF*VRVFLH
Trigger: ATGCAAAAACACCCTAACCCAAAACATCCAGGAAAT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCAGGTTCTGTTCTTGTaGCTGTCTTCTTTTAGGTTC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGQVLFL*LSSFRF
Trigger: GAACCTAAAAGAAGACAGCCACAAGAACAGAACCTG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTAATAGTCTCTGCATTTaGTGGCTGATAATGGGATGG +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGNSLCI*WLIMGW
Trigger: CCATCCCATTATCAGCCACCAAATGCAGAGACTATT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCGTTGATGCAATTTCTTaGCCCTCTGGGTCCTTCATT +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISVDAIS*PSGSFI
Trigger: AATGAAGGACCCAGAGGGTCAAGAAATTGCATCAAC...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTCCAAGAACACAGAATaGGAAACCAACAAACACACA +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGSKNTE*ETNKHT
Trigger: TGTGTGTTTGTTGGTTTCTCATTCTGTGTTCTTGGA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCCAAAGGTAATAGACTaGGCCAAATCTACTACATCA +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGPKVID*AKSTTS
Trigger: TGATGTAGTAGATTTGGCTCAGTCTATTACCTTTGG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGAAATCCACCTCCAATaGCACACATGTAGCCATATG +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSEIHLQ*HTCSHM
Trigger: CATATGGCTACATGTGTGTCATTGGAGGTGGATTTC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCCTTTATATGTTACTTaGCCTTTTCCCCTTACTGCT +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGPLYVT*PFPLTA
Trigger: AGCAGTAAGGGGAAAAGGTCAAGTAACATATAAAGG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTGGAGTCCAGCTTCTTaGGTTCTTTGTATATATTGG +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGWSPAS*VLCIYW
Trigger: CCAATATATACAAAGAACTCAAGAAGCTGGACTCCA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGACAAAACAGATAGATTaGCATGAAAACTATGGCTCA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQTKQID*HENYGS
Trigger: TGAGCCATAGTTTTCATGGCAATCTATCTGTTTTGT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTATAGAGGTTTTCTGGTaGAAGGGTCAAATAAGTCTG +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGIEVFW*KGQISL
Trigger: CAGACTTATTTGACCCTTCCACCAGAAAACCTCTAT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTACCATAGAGGTTTTCTaGTGGAAGGGTCAAATAAGT +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGTIEVF*WKGQIS
Trigger: ACTTATTTGACCCTTCCACCAGAAAACCTCTATGGT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGATTTGGAGGTCTATTTaGAGTCTATTTGGAGTTCTA +
Preference number: 2 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQIWRSI*SLFGVL
Trigger: TAGAACTCCAAATAGACTCCAAATAGACCTCCAAAT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTACAGCACAAGCCATTaGTGTTCTGTTCAGGAATTT +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGYSTSH*CSVQEF
Trigger: AAATTCCTGAACAGAACACCAATGGCTTGTGCTGTA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTCTCAGAGCCACTTCCTaGGTCCTGGGGTCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFLRATS*VLGSEP
Trigger: GGGCTCAGACCCCAGGACTCAGGAAGTGGCTCTGAG...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGAATATTGCTGCCCTTaGATTTGGAGCATAGATATT +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGEYCCP*IWSIDI
Trigger: AATATCTATGCTCCAAATTCAAGGGCAGCAATATTC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGTTCCTAGCCAAAAGATaGAGAAGCGATAATGTTTTC +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRFLAKR*RSDNVF
Trigger: GAAAACATTATCGCTTCTCCATCTTTTGGCTAGGAA...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTAGGTGCCCTGGGGTCTaGGTCTCAGCTCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIRCPGV*VSALPP
Trigger: AGGAGGCAGAGCTGAGACCCAGACCCCAGGGCACCT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGTTCTTATTACCAGTTaGAACATCTGGATATATGCC +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGVLITS*NIWIYA
Trigger: GGCATATATCCAGATGTTCCAACTGGTAATAAGAAC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp CTGTTTATTCTGAGGAGGATCTGCAGTGGCTATAAACTGGCAGTTTaGGTGAACAGGCTTTCATGGTCCTTCATCCCTTCAGGAGAGGTA +
Preference number: 2 (lower is better)
Translates to: LFILRRICSGYKLAV*VNRLSWSFIPSGEV
Trigger: TACCTCTCCTGAAGGGATGAAGGACCATGAAAGCCTGTTCACCAAAACTGCCAGTTTATAGCCACTGCAGATCCTCCTCAGAATAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTCCAAGAACACAGAATaGGAAACCAACAAACACACA +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSSKNTE*ETNKHT
Trigger: TGTGTGTTTGTTGGTTTCTCATTCTGTGTTCTTGGA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCCTCTACCGCCATCATaGGATATGATTTTAAATCTG +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSPLPPS*DMILNL
Trigger: CAGATTTAAAATCATATCTCATGATGGCGGTAGAGG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGCATCTGCTGTCACCTaGATTTTTGATCTTAGCTAT +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSASAVT*IFDLSY
Trigger: ATAGCTAAGATCAAAAATTCAGGTGACAGCAGATGC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp GCAGGATACTGTGAGTTCTTGGCAGCACCAATGAATATCCTGCTGCTTAACAAGCATGGTCTCCAGACCTaGAATGCACCATGTAAGAGA +
Preference number: 2 (lower is better)
Translates to: AGYCEFLAAPMNILLLNKHGLQT*NAPCKR
Trigger: TCTCTTACATGGTGCATTGCAGGTCTGGAGACCATG...CTTGTTAAGCAGCAGGATATTCATTGGTGCTGCCAAGAACTCACAGTATCCTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTACAAAACAGATAGATTaGCATGAAAACTATGGCTCA +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGTKQID*HENYGS
Trigger: TGAGCCATAGTTTTCATGGCAATCTATCTGTTTTGT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGACAAAACAGATAGATTaGCATGAAAACTATGGCTCA +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRTKQID*HENYGS
Trigger: TGAGCCATAGTTTTCATGGCAATCTATCTGTTTTGT...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTCAGGCAGGGTTCCTTTaGCCCTGTTCCTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFQAGFL*PCSCWH
Trigger: GTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTG...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCAGTTGAGAATTCTTTaGTTAGGTCTGTGTCCCATT +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSQLRIL*LGLCPI
Trigger: AATGGGACACAGACCTAAGCAAAGAATTCTCAACTG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTGTGCCAGTGAGGCCTaGCCAGAAGCATGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDCASEA*PEAWSP
Trigger: TGGAGACCATGCTTCTGGCCAGGCCTCACTGGCACA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCAGGTGTGAAACCTTTTaGATTCTTCCTCCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISRCETF*ILPPFE
Trigger: CTCAAAAGGAGGAAGAATCCAAAAGGTTTCACACCT...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTACCATAGAGGTTTTCTaGTGGAAGGGTCAAATAAGT +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSTIEVF*WKGQIS
Trigger: ACTTATTTGACCCTTCCACCAGAAAACCTCTATGGT...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCACCATAGAGGTTTTCTaGTGGAAGGGTCAAATAAGT +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISTIEVF*WKGQIS
Trigger: ACTTATTTGACCCTTCCACCAGAAAACCTCTATGGT...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGATTTGTTGTGCTCTGTaGGTAATTTTCTTCAGTTGT +
Preference number: 2 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRICCAL*VIFFSC
Trigger: ACAACTGAAGAAAATTACCCACAGAGCACAACAAAT...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTATTTGTTGTGCTCTGTaGGTAATTTTCTTCAGTTGT +
Preference number: 2 (lower is better)
Translates to: LTRPSSATYAARDTSSGGICCAL*VIFFSC
Trigger: ACAACTGAAGAAAATTACCCACAGAGCACAACAAAT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTGCCCCTGTTCCTGCTaGCACAAGACCCTCCAGGAT +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDCPCSC*HKTLQD
Trigger: ATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATCTCAGCTCTGCCTCCTaGCTGAGAATGAAGGCCCGA +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDLSSAS*LRMKAR
Trigger: TCGGGCCTTCATTCTCAGCCAGGAGGCAGAGCTGAG...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATCTCTGTCAGCACTCCTaGGAGTCCACCTCTCACCTG +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDLCQHS*ESTSHL
Trigger: CAGGTGAGAGGTGGACTCCCAGGAGTGCTGACAGAG...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCAATCATCTGCAGAGTaGAGTAAATACTCTAATTGC +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSQSSAE*SKYSNC
Trigger: GCAATTAGAGTATTTACTTCACTCTGCAGATGATTG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCCAATCATCTGCAGAGTaGAGTAAATACTCTAATTGC +
Preference number: 2 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISQSSAE*SKYSNC
Trigger: GCAATTAGAGTATTTACTTCACTCTGCAGATGATTG...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTTTAAATCTGACTCTTaGTTTTCGGTTGTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSFKSDS*FSVVLE
Trigger: CTCCAACACAACCGAAAATCAAGAGTCAGATTTAAA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTTTAATGGGGTTATTTaGTTTTTCTGGAGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSFNGVI*FFWSPA
Trigger: AGCTGGACTCCAGAAAAATCAAATAACCCCATTAAA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTCTTTGCCCCTGTTCCTaGTGGCACAAGACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFLCPCS*WHKTLQ
Trigger: CTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAG...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGCCTGGCCAGAAGCATaGTCTCCAGACCTGCAATGC +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIAWPEA*SPDLQC
Trigger: GCATTGCAGGTCTGGAGACCATGCTTCTGGCCAGGC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTGCCTGGCCAGAAGCATaGTCTCCAGACCTGCAATGC +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFAWPEA*SPDLQC
Trigger: GCATTGCAGGTCTGGAGACCATGCTTCTGGCCAGGC...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTTGTGCCAGTGAGGCCTaGCCAGAAGCATGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFCASEA*PEAWSP
Trigger: TGGAGACCATGCTTCTGGCCAGGCCTCACTGGCACA...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTTATGTATAAAGAAGTaGAGGATGGGGAACATAAGC +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSLCIKK*RMGNIS
Trigger: GCTTATGTTCCCCATCCTCCACTTCTTTATACATAA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGTCCTCTGGGGATCTTaGGGCCCTCTGCCACATTTG +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIVLWGS*GPLPHL
Trigger: CAAATGTGGCAGAGGGCCCCAAGATCCCCAGAGGAC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGGTTGGCACAGAAGATaGCTCAGGCTGGCCCTAACC +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIGWHRR*LRLALT
Trigger: GGTTAGGGCCAGCCTGAGCCATCTTCTGTGCCAACC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTCTTGGGGCCCTCTTCTaGGTTGGCACAGAAGATGGC +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAILGALF*VGTEDG
Trigger: GCCATCTTCTGTGCCAACCCAGAAGAGGGCCCCAAG...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTCTCTGTCAGCACTCCTaGGAGTCCACCTCTCACCTG +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAILCQHS*ESTSHL
Trigger: CAGGTGAGAGGTGGACTCCCAGGAGTGCTGACAGAG...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCTTCTTGTATGTTCATaGCCATCTCTTTCTTTAGGT +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSLLVCS*PSLSLG
Trigger: ACCTAAAGAAAGAGATGGCCATGAACATACAAGAAG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGTTCGGAGGTCTATTTaGAGTCTATTTGGAATTCTA +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSVRRSI*SLFGIL
Trigger: TAGAATTCCAAATAGACTCCAAATAGACCTCCGAAC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCTGAATGGTATGAGGTaGAATCTCAGGATTATTTTG +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSLNGMR*NLRIIL
Trigger: CAAAATAATCCTGAGATTCCACCTCATACCATTCAG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGTTCTTATTACCAGTTaGAACATCTGGATATATGCC +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSVLITS*NIWIYA
Trigger: GGCATATATCCAGATGTTCCAACTGGTAATAAGAAC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp AGACCTGCAATGCACCATGTAAGAGAGGCTGTTTCCCAGGCTCTATaGTGTTTCTTTAAGGCTTTACCTGGTTATAAGTGTCCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: RPAMHHVREAVSQAL*CFFKALPGYKCPSA
Trigger: TGCAGAAGGACACTTATAACCAGGTAAAGCCTTAAAGAAACACAATAGAGCCTGGGAAACAGCCTCTCTTACATGGTGCATTGCAGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp TTTCTGAGGAACCATCAGACTGATTTCCTGAGTGGTTGTACAAACTaGCAATCCCACCAGCAATGGAGGAGTGTTACTCTTTCTCCACAT +
Preference number: 2 (lower is better)
Translates to: FLRNHQTDFLSGCTN*QSHQQWRSVTLSPH
Trigger: ATGTGGAGAAAGAGTAACACTCCTCCATTGCTGGTGGGATTGCAAGTTTGTACAACCACTCAGGAAATCAGTCTGATGGTTCCTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAAACATCAGTGTGCCAGTaGGGCCTGGCCAGAAGCATG +
Preference number: 2 (lower is better)
Translates to: YSLPEVINASVNTKRVSETSVCQ*GLARSM
Trigger: CATGCTTCTGGCCAGGCCTCACTGGCACACTGATGT...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTACATCAGTGTGCCAGTaGGGCCTGGCCAGAAGCATG +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISTSVCQ*GLARSM
Trigger: CATGCTTCTGGCCAGGCCTCACTGGCACACTGATGT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATAGAGGGAGGAAGCAGTaGGCCATTCAGAGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDRGRKQ*AIQRSR
Trigger: TCTGCTTCTCTGAATGGCTCACTGCTTCCTCCCTCT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTGCCCTCCCTGGAGCCTaGATCTCTTTTGGCAAGGAA +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFALPGA*ISFGKE
Trigger: TTCCTTGCCAAAAGAGATTCAGGCTCCAGGGAGGGC...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGCCCTCCCTGGAGCCTaGATCTCTTTTGGCAAGGAA +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIALPGA*ISFGKE
Trigger: TTCCTTGCCAAAAGAGATTCAGGCTCCAGGGAGGGC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTCTGGGTCTCAGCTCTaGCTCCTGGCTGAGAATGAA +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDSGSQL*LLAENE
Trigger: TTCATTCTCAGCCAGGAGGCAGAGCTGAGACCCAGA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTTTTTGGCAAGGAAGGTaGCCTGGGGTCTGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFFWQGR*PGVWVS
Trigger: TGAGACCCAGACCCCAGGGCACCTTCCTTGCCAAAA...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATACTCAGAAATCTGCCTaGCTCTGTCTCCCAAGTGCC +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDTQKSA*LCLPSA
Trigger: GGCACTTGGGAGACAGAGGCAGGCAGATTTCTGAGT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCCAGGTCCATCCATTTaGCTAAGAATTTCATTAATT +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSPGPSI*LRISLI
Trigger: AATTAATGAAATTCTTAGGCAAATGGATGGACCTGG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTGGCCCTCTTCTGGGTTaGCACAGAAGATGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISGPLLG*HRRWLR
Trigger: CCTGAGCCATCTTCTGTGCCAACCCAGAAGAGGGCC...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTAGGGAGCCTGCGGAATaGAGAGTCCTCTGGAGACCT +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISREPAE*RVLWRP
Trigger: AGGTCTCCAGAGGACTCTCCATTCCGCAGGCTCCCT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATAGCCTGAATCTCTTTTaGCAAGGAAGGTGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDSLNLF*QGRCPG
Trigger: CCCAGGGCACCTTCCTTGCCAAAAGAGATTCAGGCT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTGTATTCTAAGTTTCTaGGCTAATATCCGCTTATCA +
Preference number: 2 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSCILSF*ANIRLS
Trigger: TGATAAGCGGATATTAGCCCAGAAACTTAGAATACA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTGAGGCACAGCATACCTaGATAGCAACCACAGCAAGC +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFEAQHT*IATTAS
Trigger: GCTTGCTGTGGTTGCTATGCAGGTATGCTGTGCCTC...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGGCAAGCTCTCCTCTTaGAGGAAAGATGTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDGKLSS*RKDVQK
Trigger: CTTCTGGACATCTTTCCTGCAAGAGGAGAGCTTGCC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTACTCAGAAATCTGCCTaGCTCTGTCTCCCAAGTGCC +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAITQKSA*LCLPSA
Trigger: GGCACTTGGGAGACAGAGGCAGGCAGATTTCTGAGT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGGAGAGTTTCACTCTTaGACCAGGGAAGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIGEFHS*TREGGQ
Trigger: CTGACCTCCTTCCCTGGTCCAAGAGTGAAACTCTCC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTGGAGAGTTTCACTCTTaGACCAGGGAAGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFGEFHS*TREGGQ
Trigger: CTGACCTCCTTCCCTGGTCCAAGAGTGAAACTCTCC...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTAACGAATCCCACCTCTaGTCAGGCAGGGTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFNESHL*SGRVPL
Trigger: CAAAGGAACCCTGCCTGACCAGAGGTGGGATTCGTT...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTAGCCTGAATCTCTTTTaGCAAGGAAGGTGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAISLNLF*QGRCPG
Trigger: CCCAGGGCACCTTCCTTGCCAAAAGAGATTCAGGCT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp ATGATAATTGAGAGTTTTGCTGGGTATAATAGCCTGGGCTGGCATTaGTGTTCTCTTTGGATCTGTATTACCTCTGTCCAGGATCTTCTG +
Preference number: 2 (lower is better)
Translates to: MIIESFAGYNSLGWH*CSLWICITSVQDLL
Trigger: CAGAAGATCCTGGACAGAGGTAATACAGATCCAAAGAGAACACAAATGCCAGCCCAGGCTATTATACCCAGCAAAACTCTCAATTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTAGTGTCCTGCTCCAGTaGCTTCACTTGTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFSVLLQ*LHLSHC
Trigger: ACAGTGAGACAAGTGAAGTCACTGGAGCAGGACACT...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTGGCAAGAAGGCCCAGTaGACTCTGGGATGTAAGGTA +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISGKKAQ*TLGCKV
Trigger: TACCTTACATCCCAGAGTTCACTGGGCCTTCTTGCC...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTAGAGGGAGGAAGCAGTaGGCCATTCAGAGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISRGRKQ*AIQRSR
Trigger: TCTGCTTCTCTGAATGGCTCACTGCTTCCTCCCTCT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGGAATCTTCTGCACCTaGTTCTCTCTCTTCCATCTC +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDGIFCT*FSLFHL
Trigger: GAGATGGAAGAGAGAGAATCAGGTGCAGAAGATTCC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTTTGAGGGGAATGTCTaGAACCCCAGCATTTGGCAT +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDFEGNV*NPSIWH
Trigger: ATGCCAAATGCTGGGGTTGCAGACATTCCCCTCAAA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATCATGGTCTCCAGACCTaGAATGCACCATGTAAGAGA +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDHGLQT*NAPCKR
Trigger: TCTCTTACATGGTGCATTGCAGGTCTGGAGACCATG...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTGAGGCACAGCATACCTaGATAGCAACCACAGCAAGC +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISEAQHT*IATTAS
Trigger: GCTTGCTGTGGTTGCTATGCAGGTATGCTGTGCCTC...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTGGTCAGAGTACTCTCTaGAGGCAAGCTCTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISGQSTL*RQALLL
Trigger: CAAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACC...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTACTCAGAAATCTGCCTaGCTCTGTCTCCCAAGTGCC +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISTQKSA*LCLPSA
Trigger: GGCACTTGGGAGACAGAGGCAGGCAGATTTCTGAGT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTTGAACTCAGAAATCTaGCTGCCTCTGTCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDLNSEI*LPLSPK
Trigger: CTTGGGAGACAGAGGCAGGCAGATTTCTGAGTTCAA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTTGCAACCCCAGCATTTaGCATCCCAAGGTACCTCAA +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAICNPSI*HPKVPQ
Trigger: TTGAGGTACCTTGGGATGCCAAATGCTGGGGTTGCA...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTAACGAATCCCACCTCTaGTCAGGCAGGGTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISNESHL*SGRVPL
Trigger: CAAAGGAACCCTGCCTGACCAGAGGTGGGATTCGTT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTAGTGTCCTGCTCCAGTaGCTTCACTTGTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISSVLLQ*LHLSHC
Trigger: ACAGTGAGACAAGTGAAGTCACTGGAGCAGGACACT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTTTGAGGATGTGGGGTTaGTGCAATTTCTTGACCCTC +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAILRMWG*CNFLTL
Trigger: GAGGGTCAAGAAATTGCATCAACCCCACATCCTCAA...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTTTTGAGGGGAATGTCTaGAACCCCAGCATTTGGCAT +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIFEGNV*NPSIWH
Trigger: ATGCCAAATGCTGGGGTTGCAGACATTCCCCTCAAA...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTTTTGAGGGGAATGTCTaGAACCCCAGCATTTGGCAT +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFFEGNV*NPSIWH
Trigger: ATGCCAAATGCTGGGGTTGCAGACATTCCCCTCAAA...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATATGTTGCCCTTGCATTaGTGCAGCATAGGCCATATT +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDMLPLH*CSIGHI
Trigger: AATATGGCCTATGCTGCAGCAATGCAAGGGCAACAT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTTCATGGCAGAGGGCATaGTCCTCACCACCTTTTTGT +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISSWQRA*SSPPFC
Trigger: ACAAAAAGGTGGTGAGGAGCATGCCCTCTGCCATGA...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTGGCAAGCTCTCCTCTTaGAGGAAAGATGTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISGKLSS*RKDVQK
Trigger: CTTCTGGACATCTTTCCTGCAAGAGGAGAGCTTGCC...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTTTGAACTCAGAAATCTaGCTGCCTCTGTCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAILNSEI*LPLSPK
Trigger: CTTGGGAGACAGAGGCAGGCAGATTTCTGAGTTCAA...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAATGCAACCCCAGCATTTaGCATCCCAAGGTACCTCAA +
Preference number: 2 (lower is better)
Translates to: YSLPEVINASVNTKRVSECNPSI*HPKVPQ
Trigger: TTGAGGTACCTTGGGATGCCAAATGCTGGGGTTGCA...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATAAGGATATACAACCTTaGCTTCACCAACCAGATCCC +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDKDIQP*LHQPDP
Trigger: GGGATCTGGTTGGTGAAGCCAAGGTTGTATATCCTT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTGTGAACAGGCTTTCATaGTCCTTCATCCCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFVNRLS*SFIPSG
Trigger: TCCTGAAGGGATGAAGGACCATGAAAGCCTGTTCAC...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp TTCAGAGTCTGGGGTTTTATGTGGAGTTCCTTGATCCACTTAAGCTaGAGCTTTGTACAGGAGATAAGAATGGATCAATTCACATTCTTC +
Preference number: 2 (lower is better)
Translates to: FRVWGFMWSSLIHLS*SFVQEIRMDQFTFF
Trigger: GAAGAATGTGAATTGATCCATTCTTATCTCCTGTACAAAGCTCAAGCTTAAGTGGATCAAGGAACTCCACATAAAACCCCAGACTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp TTCTCCTCTATAAGTTTCAGAGTCTGGGGTTTTATGTGGAGTTCCTaGATCCACTTAAGCTTGAGCTTTGTACAGGAGATAAGAATGGAT +
Preference number: 2 (lower is better)
Translates to: FSSISFRVWGFMWSS*IHLSLSFVQEIRMD
Trigger: ATCCATTCTTATCTCCTGTACAAAGCTCAAGCTTAAGTGGATCAAGGAACTCCACATAAAACCCCAGACTCTGAAACTTATAGAGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTCATTGCAGGATACTGTaGGTTCTTGGCAGCACCAAT +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISHCRIL*VLGSTN
Trigger: ATTGGTGCTGCCAAGAACTCACAGTATCCTGCAATG...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAATTGAGGATGTGGGGTTaGTGCAATTTCTTGACCCTC +
Preference number: 2 (lower is better)
Translates to: YSLPEVINASVNTKRVSELRMWG*CNFLTL
Trigger: GAGGGTCAAGAAATTGCATCAACCCCACATCCTCAA...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTTTTGAGGGGAATGTCTaGAACCCCAGCATTTGGCAT +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISFEGNV*NPSIWH
Trigger: ATGCCAAATGCTGGGGTTGCAGACATTCCCCTCAAA...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAACTGTCATCTTCATTCTaGCCTGCAAGCTCAGATCAG +
Preference number: 2 (lower is better)
Translates to: YSLPEVINASVNTKRVSELSSSF*PASSDQ
Trigger: CTGATCTGAGCTTGCAGGGCAGAATGAAGATGACAG...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTCTGTCATCTTCATTCTaGCCTGCAAGCTCAGATCAG +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISLSSSF*PASSDQ
Trigger: CTGATCTGAGCTTGCAGGGCAGAATGAAGATGACAG...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGCCTTTCCAATCTCTTaGTTTAGTCTGGAGAGTTTC +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDAFPIS*FSLESF
Trigger: GAAACTCTCCAGACTAAAGCAAGAGATTGGAAAGGC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTAAGGATATACAACCTTaGCTTCACCAACCAGATCCC +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFKDIQP*LHQPDP
Trigger: GGGATCTGGTTGGTGAAGCCAAGGTTGTATATCCTT...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATAATTTCTTGACCCTCTaGGTCCTTCATTGCAGGATA +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDNFLTL*VLHCRI
Trigger: TATCCTGCAATGAAGGACCCAGAGGGTCAAGAAATT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTGTGAACAGGCTTTCATaGTCCTTCATCCCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISVNRLS*SFIPSG
Trigger: TCCTGAAGGGATGAAGGACCATGAAAGCCTGTTCAC...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATCCTGGAAGAGAGTATTaGCATTTTTCCATGCAAGCT +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDPGREY*HFSMQA
Trigger: AGCTTGCATGGAAAAATGCCAATACTCTCTTCCAGG...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTACAGAGGAAGTCAAATaGGGGGAAAAATCAGCGTGT +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFTEEVK*GEKSAC
Trigger: ACACGCTGATTTTTCCCCCCATTTGACTTCCTCTGT...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp ACCTCTTCATGTCCAGCTATGCTATCTTGTTCTCACGATCTGGCTTaGGGGTTAAAAACTGAAATAGTGATCTGTGATAGTAACATTACA +
Preference number: 2 (lower is better)
Translates to: TSSCPAMLSCSHDLA*GLKTEIVICDSNIT
Trigger: TGTAATGTTACTATCACAGATCACTATTTCAGTTTTTAACCCCAAAGCCAGATCGTGAGAACAAGATAGCATAGCTGGACATGAAGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp GGAGGTCTATTTGGAGTCTATTTGGAATTCTATTTGGAGGTCTATTaGGAGTCTATTTGGAGTTCTATAGGCTTCTTGTATGTTCATGGC +
Preference number: 2 (lower is better)
Translates to: GGLFGVYLEFYLEVY*ESIWSSIGFLYVHG
Trigger: GCCATGAACATACAAGAAGCCTATAGAACTCCAAATAGACTCCAAATAGACCTCCAAATAGAATTCCAAATAGACTCCAAATAGACCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp GTCTCAGCTCCAAACTTTGACTCTGTAACTCTTTCAATGAGTATTTaGTTCCCCATTTTAAGGAGGGACAAAGAATCCACACTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: VSAPNFDSVTLSMSI*FPILRRDKESTLWF
Trigger: AAACCAAAGTGTGGATTCTTTGTCCCTCCTTAAAATGGGGAACAAAATACTCATTGAAAGAGTTACAGAGTCAAAGTTTGGAGCTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTTCTTGGCAGCACCAATaGATATCCTGCTGCTTAACA +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISSWQHQ*ISCCLT
Trigger: TGTTAAGCAGCAGGATATTCATTGGTGCTGCCAAGA...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAAGTTGATGCAATTTCTTaGCCCTCTGGGTCCTTCATT +
Preference number: 2 (lower is better)
Translates to: YSLPEVINASVNTKRVSEVDAIS*PSGSFI
Trigger: AATGAAGGACCCAGAGGGTCAAGAAATTGCATCAAC...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAACACCATGTCTGCCTATaGTACCTAGAAAACATGTCC +
Preference number: 2 (lower is better)
Translates to: YSLPEVINASVNTKRVSEHHVCL*YLENMS
Trigger: GGACATGTTTTCTAGGTAGCATAGGCAGACATGGTG...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATAGTAGATTAAACACGTaGTTTGCTCACAGCAGAGAT +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDSRLNT*FAHSRD
Trigger: ATCTCTGCTGTGAGCAAAGCACGTGTTTAATCTACT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAAAAGGATATACAACCTTaGCTTCACCAACCAGATCCC +
Preference number: 2 (lower is better)
Translates to: YSLPEVINASVNTKRVSEKDIQP*LHQPDP
Trigger: GGGATCTGGTTGGTGAAGCCAAGGTTGTATATCCTT...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTCCTGGAAGAGAGTATTaGCATTTTTCCATGCAAGCT +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIPGREY*HFSMQA
Trigger: AGCTTGCATGGAAAAATGCCAATACTCTCTTCCAGG...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTCCTGGAAGAGAGTATTaGCATTTTTCCATGCAAGCT +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFPGREY*HFSMQA
Trigger: AGCTTGCATGGAAAAATGCCAATACTCTCTTCCAGG...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATAGGTGTGAAACCTTTTaGATTCTTCCTCCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDRCETF*ILPPFE
Trigger: CTCAAAAGGAGGAAGAATCCAAAAGGTTTCACACCT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATACCATAGAGGTTTTCTaGTGGAAGGGTCAAATAAGT +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDTIEVF*WKGQIS
Trigger: ACTTATTTGACCCTTCCACCAGAAAACCTCTATGGT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTTCTCGCTTAAGATCTTaGCCTAAGCTACCAGGAACA +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISSRLRS*PKLPGT
Trigger: TGTTCCTGGTAGCTTAGGCCAAGATCTTAAGCGAGA...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGATGCCCAGTGGTCTTaGTTTCTGTTAGTAATATTC +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDDAQWS*FLLVIF
Trigger: GAATATTACTAACAGAAACCAAGACCACTGGGCATC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTCAGGTTCTGTTCTTGTaGCTGTCTTCTTTTAGGTTC +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIQVLFL*LSSFRF
Trigger: GAACCTAAAAGAAGACAGCCACAAGAACAGAACCTG...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp ATTTTAAGGAGGGACAAAGAATCCACACTTTGGTTTTCCTTCTTCTaGCGTTTCATGTGGTTTGCAAATTGTATTCTAAGTTTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: ILRRDKESTLWFSFF*RFMWFANCILSFWA
Trigger: AGCCCAGAAACTTAGAATACAATTTGCAAACCACATGAAACGCAAGAAGAAGGAAAACCAAAGTGTGGATTCTTTGTCCCTCCTTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTTTTTTCTGTTTATTCTaGGGAGGATCTGCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISFFCLF*GGSAVA
Trigger: AGCCACTGCAGATCCTCCTCAGAATAAACAGAAAAA...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTTCCAAGAACACAGAATaGGAAACCAACAAACACACA +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFSKNTE*ETNKHT
Trigger: TGTGTGTTTGTTGGTTTCTCATTCTGTGTTCTTGGA...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATCAATCATCTGCAGAGTaGAGTAAATACTCTAATTGC +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDQSSAE*SKYSNC
Trigger: GCAATTAGAGTATTTACTTCACTCTGCAGATGATTG...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTCCAAAGGTAATAGACTaGGCCAAATCTACTACATCA +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIPKVID*AKSTTS
Trigger: TGATGTAGTAGATTTGGCTCAGTCTATTACCTTTGG...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTCCTCTACCGCCATCATaGGATATGATTTTAAATCTG +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIPLPPS*DMILNL
Trigger: CAGATTTAAAATCATATCTCATGATGGCGGTAGAGG...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTTTTCATAGTCTCTGGTaGGAAGTCTGGTGTAATTCT +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIFHSLW*EVWCNS
Trigger: AGAATTACACCAGACTTCTCACCAGAGACTATGAAA...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGAATATTGCTGCCCTTaGATTTGGAGCATAGATATT +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDEYCCP*IWSIDI
Trigger: AATATCTATGCTCCAAATTCAAGGGCAGCAATATTC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTATTAAACACGTGCTTTaGTCACAGCAGAGATTTAGG +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIIKHVL*SQQRFR
Trigger: CCTAAATCTCTGCTGTGAGCAAAGCACGTGTTTAAT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTAGGTGTGAAACCTTTTaGATTCTTCCTCCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIRCETF*ILPPFE
Trigger: CTCAAAAGGAGGAAGAATCCAAAAGGTTTCACACCT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTAGGTGTGAAACCTTTTaGATTCTTCCTCCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFRCETF*ILPPFE
Trigger: CTCAAAAGGAGGAAGAATCCAAAAGGTTTCACACCT...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTTATGTATAAAGAAGTaGAGGATGGGGAACATAAGC +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDLCIKK*RMGNIS
Trigger: GCTTATGTTCCCCATCCTCCACTTCTTTATACATAA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTGATGCCCAGTGGTCTTaGTTTCTGTTAGTAATATTC +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFDAQWS*FLLVIF
Trigger: GAATATTACTAACAGAAACCAAGACCACTGGGCATC...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTATAAGTTTCAGAGTCTaGGGTTTTATGTGGAGTTCC +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIISFRV*GFMWSS
Trigger: GGAACTCCACATAAAACCCCAGACTCTGAAACTTAT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 90 bp TTTAGTGCCATTGGCGTTCTAATTATTATGTGTTCGGAGGTCTATTaGGAGTCTATTTGGAATTCTATTTGGAGGTCTATTTGGAGTCTA +
Preference number: 2 (lower is better)
Translates to: FSAIGVLIIMCSEVY*ESIWNSIWRSIWSL
Trigger: TAGACTCCAAATAGACCTCCAAATAGAATTCCAAATAGACTCCAAATAGACCTCCGAACACATAATAATTAGAACGCCAATGGCACTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTACTGGCCCTTTAAGTTaGAAATCTTCATTCTCATCT +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAITGPLS*KSSFSS
Trigger: AGATGAGAATGAAGATTTTCAACTTAAAGGGCCAGT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTATTAAACACGTGCTTTaGTCACAGCAGAGATTTAGG +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISIKHVL*SQQRFR
Trigger: CCTAAATCTCTGCTGTGAGCAAAGCACGTGTTTAAT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTTTCCTAGCCAAAAGATaGAGAAGCGATAATGTTTTC +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFFLAKR*RSDNVF
Trigger: GAAAACATTATCGCTTCTCCATCTTTTGGCTAGGAA...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATATTTGTTGTGCTCTGTaGGTAATTTTCTTCAGTTGT +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDICCAL*VIFFSC
Trigger: ACAACTGAAGAAAATTACCCACAGAGCACAACAAAT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTTTATGTATAAAGAAGTaGAGGATGGGGAACATAAGC +
Preference number: 2 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFLCIKK*RMGNIS
Trigger: GCTTATGTTCCCCATCCTCCACTTCTTTATACATAA...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTTTATGTATAAAGAAGTaGAGGATGGGGAACATAAGC +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAILCIKK*RMGNIS
Trigger: GCTTATGTTCCCCATCCTCCACTTCTTTATACATAA...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGTTGAGGATATTTACTaGCCCTTTAAGTTGAAAATC +
Preference number: 2 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDVEDIY*PFKLKI
Trigger: GATTTTCAACTTAAAGGGCCAGTAAATATCCTCAAC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGTTCGGAGGTCTATTTaGAGTCTATTTGGAATTCTA +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIVRRSI*SLFGIL
Trigger: TAGAATTCCAAATAGACTCCAAATAGACCTCCGAAC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTCATTTGTGTTCTCTTTaGATCTGTATTACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIHLCSL*ICITSV
Trigger: GACAGAGGTAATACAGATCCAAAGAGAACACAAATG...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR TCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAACAATCATCTGCAGAGTaGAGTAAATACTCTAATTGC +
Preference number: 2 (lower is better)
Translates to: YSLPEVINASVNTKRVSEQSSAE*SKYSNC
Trigger: GCAATTAGAGTATTTACTTCACTCTGCAGATGATTG...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTTTCCTAGCCAAAAGATaGAGAAGCGATAATGTTTTC +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISFLAKR*RSDNVF
Trigger: GAAAACATTATCGCTTCTCCATCTTTTGGCTAGGAA...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTAATTTGGTTTTGTCATaGAATACCTTGGTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: CNFMRSHLSILDLTAQAINLVLS*NTLVSP
Trigger: TGGAGAAACCAAGGTATTCCATGACAAAACCAAATT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR GCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTACAAAACAGATAGATTaGCATGAAAACTATGGCTCA +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISTKQID*HENYGS
Trigger: TGAGCCATAGTTTTCATGGCAATCTATCTGTTTTGT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTTGCTTCTTTCTTTTCTaGATTCACCATAGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISCFFLF*IHHRGF
Trigger: AAAACCTCTATGGTGAATCCAGAAAAGAAAGAAGCA...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp GGGTGTGATAGGGGGCCTGCGGCATGGAGAGTCCTCTaGGGATCTTGGGGCCCTCTGCCACATTTGCGCGGA +
Preference number: 3 (lower is better)
Translates to: GCDRGPAAWRVL*GSWGPLPHLRG
Trigger: TCCGCGCAAATGTGGCAGAGGGCCCCAAGATCCCCAGAGGACTCTCCATGCCGCAGGCCCCCTATCACACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp GGGTGTGCTAGGGAGCCTGCGGAATGGAGAGTCCTCTaGAGACCTTGGGGCCCTCTTCTGGGTTGGCACAGA +
Preference number: 3 (lower is better)
Translates to: GCAREPAEWRVL*RPWGPLLGWHR
Trigger: TCTGTGCCAACCCAGAAGAGGGCCCCAAGGTCTCCAGAGGACTCTCCATTCCGCAGGCTCCCTAGCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp TCCCAAGGTCCTGGGTGTGCTAGGGAGCCTGCGGAATaGAGAGTCCTCTGGAGACCTTGGGGCCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: SQGPGCAREPAE*RVLWRPWGPLL
Trigger: CAGAAGAGGGCCCCAAGGTCTCCAGAGGACTCTCCATTCCGCAGGCTCCCTAGCACACCCAGGACCTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp AGGGAGCCTGCGGAATGGAGAGTCCTCTGGAGACCTTaGGGCCCTCTTCTGGGTTGGCACAGAAGATGGCTC +
Preference number: 3 (lower is better)
Translates to: REPAEWRVLWRP*GPLLGWHRRWL
Trigger: GAGCCATCTTCTGTGCCAACCCAGAAGAGGGCCCCAAGGTCTCCAGAGGACTCTCCATTCCGCAGGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp AAGGTGCCCTGGGGTCTGGGTCTCAGCTCTGCCTCCTaGCTGAGAATGAAGGCCCGAAGGGTCCCTATCCAA +
Preference number: 3 (lower is better)
Translates to: KVPWGLGLSSAS*LRMKARRVPIQ
Trigger: TTGGATAGGGACCCTTCGGGCCTTCATTCTCAGCCAGGAGGCAGAGCTGAGACCCAGACCCCAGGGCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp AGAGTCCTCTGGAGACCTTGGGGCCCTCTTCTGGGTTaGCACAGAAGATGGCTCAGGCTGGCCCTAACCAGA +
Preference number: 3 (lower is better)
Translates to: RVLWRPWGPLLG*HRRWLRLALTR
Trigger: TCTGGTTAGGGCCAGCCTGAGCCATCTTCTGTGCCAACCCAGAAGAGGGCCCCAAGGTCTCCAGAGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGTCAGGCAGGGTTCCTTaGCCCCTGTTCCTGCTGGCA +
Preference number: 3 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRSGRVP*PLFLLA
Trigger: TGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGA...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGGGCCCTCTTCTGGGTaGGCACAGAAGATGGCTCAG +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGGPSSG*AQKMAQ
Trigger: CTGAGCCATCTTCTGTGCCAACCCAGAAGAGGGCCC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGAGCCTGAATCTCTTTaGGCAAGGAAGGTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQEPESL*ARKVPW
Trigger: CCAGGGCACCTTCCTTGCCAAAAGAGATTCAGGCTC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp AAGCTCTGTTGCTTCTGCTGCCCACATGCTCTCAAGTaGTCCCAAGGTCCTGGGTGTGCTAGGGAGCCTGCG +
Preference number: 3 (lower is better)
Translates to: KLCCFCCPHALK*SQGPGCAREPA
Trigger: CGCAGGCTCCCTAGCACACCCAGGACCTTGGGATCACTTGAGAGCATGTGGGCAGCAGAAGCAACAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp AGAACGAATCCCACCTCTGGTCAGGCAGGGTTCCTTTaGCCCTGTTCCTGCTGGCACAAGACCCTCCAGGAT +
Preference number: 3 (lower is better)
Translates to: RTNPTSGQAGFL*PCSCWHKTLQD
Trigger: ATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGACCAGAGGTGGGATTCGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGTGGAGAGTTTCACTCTaGGACCAGGGAAGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQWRVSL*DQGRRS
Trigger: TGACCTCCTTCCCTGGTCCAAGAGTGAAACTCTCCA...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp GCCTCTGTCAGCACTCCTGGGAGTCCACCTCTCACCTaGGTTTCAGTGGTCAGAGTACTCTCTGCAGGCAAG +
Preference number: 3 (lower is better)
Translates to: ASVSTPGSPPLT*VSVVRVLSAGK
Trigger: CTTGCCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGAGTGCTGACAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTAGCACTGTGGTTCCCTaGTCTGTGGGACAACAGGGT +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGSTVVP*SVGQQG
Trigger: ACCCTGTTGTCCCACAGACAAGGGAACCACAGTGCT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGGGCCCTCTTCTGGGTaGGCACAGAAGATGGCTCAG +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSGPSSG*AQKMAQ
Trigger: CTGAGCCATCTTCTGTGCCAACCCAGAAGAGGGCCC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp GATATACAACCTTGGCTTCACCAACCAGATCCCCGGTaGTCCCTCAGCACTGTGGTTCCCTTGTCTGTGGGA +
Preference number: 3 (lower is better)
Translates to: DIQPWLHQPDPR*SLSTVVPLSVG
Trigger: TCCCACAGACAAGGGAACCACAGTGCTGAGGGAGCACCGGGGATCTGGTTGGTGAAGCCAAGGTTGTATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp CCAGAAGTCTATAGCTCAGAGCCACTTCCTGAGTCCTaGGGTCTGAGCCCTCCCTGGAGCCTGAATCTCTTT +
Preference number: 3 (lower is better)
Translates to: PEVYSSEPLPES*GLSPPWSLNLF
Trigger: AAAGAGATTCAGGCTCCAGGGAGGGCTCAGACCCCAGGACTCAGGAAGTGGCTCTGAGCTATAGACTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp GCACTCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTaGTCAGAGTACTCTCTGCAGGCAAGCTCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: ALLGVHLSPEFQ*SEYSLQASSPL
Trigger: AAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCTCACCACCTTTTaGTCTCCTCATCTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQLLTTF*SPHLSE
Trigger: CTCTGAAAGATGAGGAGACAAAAAGGTGGTGAGGAG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGATCCAAGAAGCTCTGTaGCTTCTGCTGCCCACATGC +
Preference number: 3 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRIQEAL*LLLPTC
Trigger: GCATGTGGGCAGCAGAAGCAACAGAGCTTCTTGGAT...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTATCCAAGAAGCTCTGTaGCTTCTGCTGCCCACATGC +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGIQEAL*LLLPTC
Trigger: GCATGTGGGCAGCAGAAGCAACAGAGCTTCTTGGAT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp GCATTTGGCATCCCAAGGTACCTCAAGGTCAGACTGTaGTACCTACAGGCCACCATGTCTGCCTATGCTACC +
Preference number: 3 (lower is better)
Translates to: AFGIPRYLKVRL*YLQATMSAYAT
Trigger: GGTAGCATAGGCAGACATGGTGGCCTGTAGGTAGCACAGTCTGACCTTGAGGTACCTTGGGATGCCAAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp ACCTCTGGTCAGGCAGGGTTCCTTTGCCCCTGTTCCTaGTGGCACAAGACCCTCCAGGATTCTTTGAAATTG +
Preference number: 3 (lower is better)
Translates to: TSGQAGFLCPCS*WHKTLQDSLKL
Trigger: CAATTTCAAAGAATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGACCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp AAAGAGGTGTTTACACATCAGTGTGCCAGTGAGGCCTaGCCAGAAGCATGGTCTCCAGACCTGCAATGCACC +
Preference number: 3 (lower is better)
Translates to: KEVFTHQCASEA*PEAWSPDLQCT
Trigger: GGTGCATTGCAGGTCTGGAGACCATGCTTCTGGCCAGGCCTCACTGGCACACTGATGTGTAAACACCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp CCCGGTGCTCCCTCAGCACTGTGGTTCCCTTGTCTGTaGGACAACAGGGTACATCTCCATAGCATAAGAAAG +
Preference number: 3 (lower is better)
Translates to: PGAPSALWFPCL*DNRVHLHSIRK
Trigger: CTTTCTTATGCTATGGAGATGTACCCTGTTGTCCCACAGACAAGGGAACCACAGTGCTGAGGGAGCACCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGTCCAGCTATGCTATCTaGTTCTCACGATCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQSSYAI*FSRSGF
Trigger: AAAGCCAGATCGTGAGAACAAGATAGCATAGCTGGA...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCAGCACTGTGGTTCCCTaGTCTGTGGGACAACAGGGT +
Preference number: 3 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISSTVVP*SVGQQG
Trigger: ACCCTGTTGTCCCACAGACAAGGGAACCACAGTGCT...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGTTCAGGTTCTGTTCTaGTGGCTGTCTTCTTTTAGG +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQVQVLF*WLSSFR
Trigger: CCTAAAAGAAGACAGCCACAAGAACAGAACCTGAAC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTCTTTCTCCACATCCTaGTCAGCATCTGCTGTCACC +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGSFSTS*SASAVT
Trigger: GGTGACAGCAGATGCTGACAAGGATGTGGAGAAAGA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp ATCTGTCAAAGAGGTGTTTACACATCAGTGTGCCAGTaGGGCCTGGCCAGAAGCATGGTCTCCAGACCTGCA +
Preference number: 3 (lower is better)
Translates to: ICQRGVYTSVCQ*GLARSMVSRPA
Trigger: TGCAGGTCTGGAGACCATGCTTCTGGCCAGGCCTCACTGGCACACTGATGTGTAAACACCTCTTTGACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp TCTGGTCAGGCAGGGTTCCTTTGCCCCTGTTCCTGCTaGCACAAGACCCTCCAGGATTCTTTGAAATTGATG +
Preference number: 3 (lower is better)
Translates to: SGQAGFLCPCSC*HKTLQDSLKLM
Trigger: CATCAATTTCAAAGAATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp TCCTCCTGTAATTCTGTTAGCCTCTGTCAGCACTCCTaGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAG +
Preference number: 3 (lower is better)
Translates to: SSCNSVSLCQHS*ESTSHLSFSGQ
Trigger: CTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGAGTGCTGACAGAGGCTAACAGAATTACAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp CTGATAATGGGATGGATCCCCCAGTGGGGCAGTCTCTaGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTT +
Preference number: 3 (lower is better)
Translates to: LIMGWIPQWGSL*MVHPFVSAPNF
Trigger: AAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCATTATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp TGCAATAGTCTCTGCATTTGGTGGCTGATAATGGGATaGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCAT +
Preference number: 3 (lower is better)
Translates to: CNSLCIWWLIMG*IPQWGSLWMVH
Trigger: ATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCATTATCAGCCACCAAATGCAGAGACTATTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCTTGAGGATGTGGGGTaGATGCAATTTCTTGACCCT +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGLEDVG*MQFLDP
Trigger: AGGGTCAAGAAATTGCATCAACCCCACATCCTCAAG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTGGAGAGTTTCACTCTaGGACCAGGGAAGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSWRVSL*DQGRRS
Trigger: TGACCTCCTTCCCTGGTCCAAGAGTGAAACTCTCCA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTACTAAAATGTTGCCCTaGCATTGCTGCAGCATAGGC +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGTKMLP*HCCSIG
Trigger: GCCTATGCTGCAGCAATGCAAGGGCAACATTTTAGT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCAGGATTCTTTGAAATaGATGTTGAGGTCCACTTGC +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQQDSLK*MLRSTC
Trigger: GCAAGTGGACCTCAACATCAATTTCAAAGAATCCTG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGGCCTTTATATGTTACTaGACCTTTTCCCCTTACTGC +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQAFICY*TFSPYC
Trigger: GCAGTAAGGGGAAAAGGTCAAGTAACATATAAAGGC...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCAAAGAATCCACACTTaGGTTTTCCTTCTTCTTGCG +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQQRIHT*VFLLLA
Trigger: CGCAAGAAGAAGGAAAACCAAAGTGTGGATTCTTTG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGGATACTGTGAGTTCTaGGCAGCACCAATGAATATC +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGGYCEF*AAPMNI
Trigger: GATATTCATTGGTGCTGCCAAGAACTCACAGTATCC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGATGTTGAGGTCCACTaGCCCATTATTCCGAGACCT +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSDVEVH*PIIPRP
Trigger: AGGTCTCGGAATAATGGGCAAGTGGACCTCAACATC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTACCCTCCAGGATTCTTaGAAATTGATGTTGAGGTCC +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGTLQDS*KLMLRS
Trigger: GGACCTCAACATCAATTTCAAAGAATCCTGGAGGGT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGTTCAGGTTCTGTTCTaGTGGCTGTCTTCTTTTAGG +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGVQVLF*WLSSFR
Trigger: CCTAAAAGAAGACAGCCACAAGAACAGAACCTGAAC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTGGAGTCCAGCTTCTaGAGTTCTTTGTATATATTG +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQLESSF*SSLYIL
Trigger: CAATATATACAAAGAACTCAAGAAGCTGGACTCCAG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGTTCAGTATGCCTCAGTaGAGAATTCTTTGCTTAGGT +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQFSMPQ*RILCLG
Trigger: ACCTAAGCAAAGAATTCTCAACTGAGGCATACTGAA...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCATGTGGTTTGCAAATaGTATTCTAAGTTTCTGGGC +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQHVVCK*YSKFLG
Trigger: GCCCAGAAACTTAGAATACAATTTGCAAACCACATG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp GTGGTCAGAGTACTCTCTGCAGGCAAGCTCTCCTCTTaGAGGAAAGATGTCCAGAAGTCTATAGCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: VVRVLSAGKLSS*RKDVQKSIAQS
Trigger: GCTCTGAGCTATAGACTTCTGGACATCTTTCCTGCAAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp ACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTaGAGGCAAGCTCTCCTCTTGCAGGAAAGATGTCCA +
Preference number: 3 (lower is better)
Translates to: TSHLSFSGQSTL*RQALLLQERCP
Trigger: TGGACATCTTTCCTGCAAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp CTGGTTATTGCTGGCATATGCAATAGTCTCTGCATTTaGTGGCTGATAATGGGATGGATCCCCCAGTGGGGC +
Preference number: 3 (lower is better)
Translates to: LVIAGICNSLCI*WLIMGWIPQWG
Trigger: GCCCCACTGGGGGATCCATCCCATTATCAGCCACCAAATGCAGAGACTATTGCATATGCCAGCAATAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGGTTTCATAGCATTTTaGGAACCCAGATCTGTCGTA +
Preference number: 3 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRGFIAF*EPRSVV
Trigger: TACGACAGATCTGGGTTCCAAAAATGCTATGAAACC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCCAAGGATATACAACCTaGGCTTCACCAACCAGATCC +
Preference number: 3 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISQGYTT*ASPTRS
Trigger: GGATCTGGTTGGTGAAGCCAAGGTTGTATATCCTTG...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCTTGAGGATGTGGGGTaGATGCAATTTCTTGACCCT +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSLEDVG*MQFLDP
Trigger: AGGGTCAAGAAATTGCATCAACCCCACATCCTCAAG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTATAAACTGGCAGTTTaGGTGAACAGGCTTTCATGG +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGYKLAV*VNRLSW
Trigger: CCATGAAAGCCTGTTCACCAAAACTGCCAGTTTATA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCCTCCTCACCACCTTTTaGTCTCCTCATCTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISLLTTF*SPHLSE
Trigger: CTCTGAAAGATGAGGAGACAAAAAGGTGGTGAGGAG...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCAGGATTCTTTGAAATaGATGTTGAGGTCCACTTGC +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGQDSLK*MLRSTC
Trigger: GCAAGTGGACCTCAACATCAATTTCAAAGAATCCTG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGTACTGGCCCTTTAAGTaGAAAATCTTCATTCTCATC +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQYWPFK*KIFILI
Trigger: GATGAGAATGAAGATTTTCAACTTAAAGGGCCAGTA...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTATTTGGAGTCTATTaGGAATTCTATTTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQLFGVY*EFYLEV
Trigger: GACCTCCAAATAGAATTCCAAATAGACTCCAAATAG...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTTTCGGACCATTTGCTaGGAAAATTGTTTTCCAGCC +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGFRTIC*ENCFPA
Trigger: GGCTGGAAAACAATTTTCCAAGCAAATGGTCCGAAA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGTTGAAATCTATTCCATaGATCTACCTGTCTGTCACT +
Preference number: 3 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQLKSIP*IYLSVT
Trigger: AGTGACAGACAGGTAGATCAATGGAATAGATTTCAA...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp GGAGGATCTGCAGTGGCTATAAACTGGCAGTTTTGGTaGACAGGCTTTCATGGTCCTTCATCCCTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: GGSAVAINWQFW*TGFHGPSSLQE
Trigger: CTCCTGAAGGGATGAAGGACCATGAAAGCCTGTTCACCAAAACTGCCAGTTTATAGCCACTGCAGATCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp GCAGCATTTCAGAGACGCACAGCCTTTCCAATCTCTTaGTTTAGTCTGGAGAGTTTCACTCTTGGACCAGGG +
Preference number: 3 (lower is better)
Translates to: AAFQRRTAFPIS*FSLESFTLGPG
Trigger: CCCTGGTCCAAGAGTGAAACTCTCCAGACTAAAGCAAGAGATTGGAAAGGCTGTGCGTCTCTGAAATGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp ATGAATATCCTGCTGCTTAACAAGGATATACAACCTTaGCTTCACCAACCAGATCCCCGGTGCTCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: MNILLLNKDIQP*LHQPDPRCSLS
Trigger: GCTGAGGGAGCACCGGGGATCTGGTTGGTGAAGCCAAGGTTGTATATCCTTGTTAAGCAGCAGGATATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp AGAGACGCACAGCCTTTCCAATCTCTTGCTTTAGTCTaGAGAGTTTCACTCTTGGACCAGGGAAGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: RDAQPFQSLALV*RVSLLDQGRRS
Trigger: TGACCTCCTTCCCTGGTCCAAGAGTGAAACTCTCCAGACTAAAGCAAGAGATTGGAAAGGCTGTGCGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGGATACTGTGAGTTCTaGGCAGCACCAATGAATATC +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSGYCEF*AAPMNI
Trigger: GATATTCATTGGTGCTGCCAAGAACTCACAGTATCC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTTAGAAAGTAAAGTGTaGGTTTCCCTGGGGATAAAG +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGLESKV*VSLGIK
Trigger: CTTTATCCCCAGGGAAACCAACACTTTACTTTCTAA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGTTAGAAAGTAAAGTGTaGGTTTCCCTGGGGATAAAG +
Preference number: 3 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRLESKV*VSLGIK
Trigger: CTTTATCCCCAGGGAAACCAACACTTTACTTTCTAA...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTCCTTTCCCAATCTGTaGGTGTCCTTTTTGTCTTAT +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGSFPNL*VSFLSY
Trigger: ATAAGACAAAAAGGACACCAACAGATTGGGAAAGGA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp AGTGAACTCTGGGATGTAAGGTATAGGCCACTGAAATaGCCAGGAGCCAGACGTAGAAGCTTGTGTGTTAGC +
Preference number: 3 (lower is better)
Translates to: SELWDVRYRPLK*PGARRRSLCVS
Trigger: GCTAACACACAAGCTTCTACGTCTGGCTCCTGGTCATTTCAGTGGCCTATACCTTACATCCCAGAGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp ATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTaGGGGTACTGGTTATTGCTGGCATATGCAATAGTC +
Preference number: 3 (lower is better)
Translates to: IFCYICSQRHEL*GYWLLLAYAIV
Trigger: GACTATTGCATATGCCAGCAATAACCAGTACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCTATAAACTGGCAGTTTaGGTGAACAGGCTTTCATGG +
Preference number: 3 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISYKLAV*VNRLSW
Trigger: CCATGAAAGCCTGTTCACCAAAACTGCCAGTTTATA...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCTAATCCTACACTTATaGGTGTTGCTCTGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSLILHL*VLLWVS
Trigger: ACTTACCCAGAGCAACACCAATAAGTGTAGGATTAG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGATATCAGAGATTATTaGTTGTGCTCTGTGGGTAAT +
Preference number: 3 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRDIRDY*LCSVGN
Trigger: ATTACCCACAGAGCACAACAAATAATCTCTGATATC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTGGTATGATGTGTGCTTaGAGCTTTACTAAAGTTTCT +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGGMMCA*SFTKVS
Trigger: AGAAACTTTAGTAAAGCTCAAAGCACACATCATACC...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTTACAGCACAAGCCATaGGTGTTCTGTTCAGGAATT +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSLQHKP*VFCSGI
Trigger: AATTCCTGAACAGAACACCAATGGCTTGTGCTGTAA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTTCCAGGTCCATCCATTaGCCTAAGAATTTCATTAAT +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGSRSIH*PKNFIN
Trigger: ATTAATGAAATTCTTAGGCAAATGGATGGACCTGGA...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTCTTTCAATGAGTATTTaGTTCCCCATTTTAAGGAGG +
Preference number: 3 (lower is better)
Translates to: LTRPSSATYAARDTSSGGLSMSI*FPILRR
Trigger: CCTCCTTAAAATGGGGAACAAAATACTCATTGAAAG...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTTCAGGCAGGGTTCCTTaGCCCCTGTTCCTGCTGGCA +
Preference number: 3 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFSGRVP*PLFLLA
Trigger: TGCCAGCAGGAACAGGGGCAAAGGAACCCTGCCTGA...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTGTTCGGAGGTCTATTaGGAGTCTATTTGGAATTCT +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSCSEVY*ESIWNS
Trigger: AGAATTCCAAATAGACTCCAAATAGACCTCCGAACA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTTCAGTATGCCTCAGTaGAGAATTCTTTGCTTAGGT +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSFSMPQ*RILCLG
Trigger: ACCTAAGCAAAGAATTCTCAACTGAGGCATACTGAA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTCATGTGGTTTGCAAATaGTATTCTAAGTTTCTGGGC +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSHVVCK*YSKFLG
Trigger: GCCCAGAAACTTAGAATACAATTTGCAAACCACATG...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp GGGTATAATAGCCTGGGCTGGCATTTGTGTTCTCTTTaGATCTGTATTACCTCTGTCCAGGATCTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: GYNSLGWHLCSL*ICITSVQDLLA
Trigger: AGCCAGAAGATCCTGGACAGAGGTAATACAGATCCAAAGAGAACACAAATGCCAGCCCAGGCTATTATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTGATATCAGAGATTATTaGTTGTGCTCTGTGGGTAAT +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSDIRDY*LCSVGN
Trigger: ATTACCCACAGAGCACAACAAATAATCTCTGATATC...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTTATTTGGAGGTCTATTaGGAGTCTATTTGGAGTTCT +
Preference number: 3 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSYLEVY*ESIWSS
Trigger: AGAACTCCAAATAGACTCCAAATAGACCTCCAAATA...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTAGTCCTCTGGGGATCTaGGGGCCCTCTGCCACATTT +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISSPLGI*GPSATF
Trigger: AAATGTGGCAGAGGGCCCCAAGATCCCCAGAGGACT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp CTTTCCCCCACTTTCTCCTCTATAAGTTTCAGAGTCTaGGGTTTTATGTGGAGTTCCTTGATCCACTTAAGC +
Preference number: 3 (lower is better)
Translates to: LSPTFSSISFRV*GFMWSSLIHLS
Trigger: GCTTAAGTGGATCAAGGAACTCCACATAAAACCCCAGACTCTGAAACTTATAGAGGAGAAAGTGGGGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTAGCACTGTGGTTCCCTaGTCTGTGGGACAACAGGGT +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISSTVVP*SVGQQG
Trigger: ACCCTGTTGTCCCACAGACAAGGGAACCACAGTGCT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGATGTTGAGGTCCACTaGCCCATTATTCCGAGACCT +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDDVEVH*PIIPRP
Trigger: AGGTCTCGGAATAATGGGCAAGTGGACCTCAACATC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTATCCAAGAAGCTCTGTaGCTTCTGCTGCCCACATGC +
Preference number: 3 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFIQEAL*LLLPTC
Trigger: GCATGTGGGCAGCAGAAGCAACAGAGCTTCTTGGAT...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTGAGCCTGAATCTCTTTaGGCAAGGAAGGTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISEPESL*ARKVPW
Trigger: CCAGGGCACCTTCCTTGCCAAAAGAGATTCAGGCTC...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp ATGTGTTCTTATTACCAGTTGGAACATCTGGATATATaGCCAGGAGAGGTGTTGCTGGATCTTCCAGTAGTA +
Preference number: 3 (lower is better)
Translates to: MCSYYQLEHLDI*PGEVLLDLPVV
Trigger: TACTACTGGAAGATCCAGCAACACCTCTCCTGGGCATATATCCAGATGTTCCAACTGGTAATAAGAACACAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp ACAGTCCCTCTTTTTCTGGTTGGTCTAATTAGCTCCTaGAAGAGAGTATTGGCATTTTTCCATGCAAGCTGT +
Preference number: 3 (lower is better)
Translates to: TVPLFLVGLISS*KRVLAFFHASC
Trigger: ACAGCTTGCATGGAAAAATGCCAATACTCTCTTCCAGGAGCTAATTAGACCAACCAGAAAAAGAGGGACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp AGAGGTTTTCTGGTGGAAGGGTCAAATAAGTCTGTCTaGTATCCAAATAGGGGATCTCTGCATTCTGTAGAA +
Preference number: 3 (lower is better)
Translates to: RGFLVEGSNKSV*YPNRGSLHSVE
Trigger: TTCTACAGAATGCAGAGATCCCCTATTTGGATACCAGACAGACTTATTTGACCCTTCCACCAGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp GGTTTCCCGATATCAGAGATTATTTGTTGTGCTCTGTaGGTAATTTTCTTCAGTTGTCCCCAAGTGGGTAGA +
Preference number: 3 (lower is better)
Translates to: GFPISEIICCAL*VIFFSCPQVGR
Trigger: TCTACCCACTTGGGGACAACTGAAGAAAATTACCCACAGAGCACAACAAATAATCTCTGATATCGGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp TATGAACATAGTGGAGCATGTGTTCTTATTACCAGTTaGAACATCTGGATATATGCCCAGGAGAGGTGTTGC +
Preference number: 3 (lower is better)
Translates to: YEHSGACVLITS*NIWIYAQERCC
Trigger: GCAACACCTCTCCTGGGCATATATCCAGATGTTCCAACTGGTAATAAGAACACATGCTCCACTATGTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTTGGAGAGTTTCACTCTaGGACCAGGGAAGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISWRVSL*DQGRRS
Trigger: TGACCTCCTTCCCTGGTCCAAGAGTGAAACTCTCCA...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAATGGAGAGTTTCACTCTaGGACCAGGGAAGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: YSLPEVINASVNTKRVSEWRVSL*DQGRRS
Trigger: TGACCTCCTTCCCTGGTCCAAGAGTGAAACTCTCCA...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTGATGTTGAGGTCCACTaGCCCATTATTCCGAGACCT +
Preference number: 3 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFDVEVH*PIIPRP
Trigger: AGGTCTCGGAATAATGGGCAAGTGGACCTCAACATC...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTAGCCTGGGCTGGCATTaGTGTTCTCTTTGGATCTGT +
Preference number: 3 (lower is better)
Translates to: CNFMRSHLSILDLTAQAISLGWH*CSLWIC
Trigger: ACAGATCCAAAGAGAACACAAATGCCAGCCCAGGCT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp TCATTGCAGGATACTGTGAGTTCTTGGCAGCACCAATaGATATCCTGCTGCTTAACAAGGATATACAACCTT +
Preference number: 3 (lower is better)
Translates to: SLQDTVSSWQHQ*ISCCLTRIYNL
Trigger: AAGGTTGTATATCCTTGTTAAGCAGCAGGATATTCATTGGTGCTGCCAAGAACTCACAGTATCCTGCAATGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp TCTGTTTGGATTTTTCTGTTTATTCTGAGGAGGATCTaGAGTGGCTATAAACTGGCAGTTTTGGTGAACAGG +
Preference number: 3 (lower is better)
Translates to: SVWIFLFILRRI*SGYKLAVLVNR
Trigger: CCTGTTCACCAAAACTGCCAGTTTATAGCCACTGCAGATCCTCCTCAGAATAAACAGAAAAATCCAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp GCTTCTTTCTTTTCTGGATTCACCATAGAGGTTTTCTaGTGGAAGGGTCAAATAAGTCTGTCTGGTATCCAA +
Preference number: 3 (lower is better)
Translates to: ASFFSGFTIEVF*WKGQISLSGIQ
Trigger: TTGGATACCAGACAGACTTATTTGACCCTTCCACCAGAAAACCTCTATGGTGAATCCAGAAAAGAAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp CCTATTATCTGTAGGTTTGGTCTTCTCATTGTGTCCTaGATTTCCTGGATGTTTTGGGTTAGGGTGTTTTTG +
Preference number: 3 (lower is better)
Translates to: PIICRFGLLIVS*ISWMFWVRVFL
Trigger: CAAAAACACCCTAACCCAAAACATCCAGGAAATCCAGGACACAATGAGAAGACCAAACCTACAGATAATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp AGCTCCTTTGCCAAAGATCAAGTGACCATAGGTGTGTaGGTTCATTTCTGTGTCTTGAAATCTATTCCATTG +
Preference number: 3 (lower is better)
Translates to: SSFAKDQVTIGV*VHFCVLKSIPL
Trigger: CAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACTTGATCTTTGGCAAAGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTCCAGCTATGCTATCTaGTTCTCACGATCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDSSYAI*FSRSGF
Trigger: AAAGCCAGATCGTGAGAACAAGATAGCATAGCTGGA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTCAAGGATATACAACCTaGGCTTCACCAACCAGATCC +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISQGYTT*ASPTRS
Trigger: GGATCTGGTTGGTGAAGCCAAGGTTGTATATCCTTG...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAACTTGAGGATGTGGGGTaGATGCAATTTCTTGACCCT +
Preference number: 3 (lower is better)
Translates to: YSLPEVINASVNTKRVSELEDVG*MQFLDP
Trigger: AGGGTCAAGAAATTGCATCAACCCCACATCCTCAAG...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTATAAACTGGCAGTTTaGGTGAACAGGCTTTCATGG +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDYKLAV*VNRLSW
Trigger: CCATGAAAGCCTGTTCACCAAAACTGCCAGTTTATA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTACTAAAATGTTGCCCTaGCATTGCTGCAGCATAGGC +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISTKMLP*HCCSIG
Trigger: GCCTATGCTGCAGCAATGCAAGGGCAACATTTTAGT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTTTTTCCCTTCCTCACTaGTTCCTAGCCAAAAGATGG +
Preference number: 3 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIFSLPH*FLAKRW
Trigger: CCATCTTTTGGCTAGGAACAAGTGAGGAAGGGAAAA...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTTTTTCCCTTCCTCACTaGTTCCTAGCCAAAAGATGG +
Preference number: 3 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFFSLPH*FLAKRW
Trigger: CCATCTTTTGGCTAGGAACAAGTGAGGAAGGGAAAA...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATCTAATCCTACACTTATaGGTGTTGCTCTGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDLILHL*VLLWVS
Trigger: ACTTACCCAGAGCAACACCAATAAGTGTAGGATTAG...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp ACCGCCATCATGAGATATGATTTTAAATCTGACTCTTaGTTTTCGGTTGTGTTGGAGTATCCAGGACTCACT +
Preference number: 3 (lower is better)
Translates to: TAIMRYDFKSDS*FSVVLEYPGLT
Trigger: AGTGAGTCCTGGATACTCCAACACAACCGAAAATCAAGAGTCAGATTTAAAATCATATCTCATGATGGCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR GCA 72 bp TCTCAGCCATTCAGTATGCCTCAGTTGAGAATTCTTTaGTTAGGTCTGTGTCCCATTTTTAATGGGGTTATT +
Preference number: 3 (lower is better)
Translates to: SQPFSMPQLRIL*LGLCPIFNGVI
Trigger: AATAACCCCATTAAAAATGGGACACAGACCTAAGCAAAGAATTCTCAACTGAGGCATACTGAATGGCTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp ATAATTGAGAGTTTTGCTGGGTATAATAGCCTGGGCTaGCATTTGTGTTCTCTTTGGATCTGTATTACCTCT +
Preference number: 3 (lower is better)
Translates to: IIESFAGYNSLG*HLCSLWICITS
Trigger: AGAGGTAATACAGATCCAAAGAGAACACAAATGCCAGCCCAGGCTATTATACCCAGCAAAACTCTCAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAATCCAGCTATGCTATCTaGTTCTCACGATCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: YSLPEVINASVNTKRVSESSYAI*FSRSGF
Trigger: AAAGCCAGATCGTGAGAACAAGATAGCATAGCTGGA...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGGTTTCATAGCATTTTaGGAACCCAGATCTGTCGTA +
Preference number: 3 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIGFIAF*EPRSVV
Trigger: TACGACAGATCTGGGTTCCAAAAATGCTATGAAACC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTGGATACTGTGAGTTCTaGGCAGCACCAATGAATATC +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISGYCEF*AAPMNI
Trigger: GATATTCATTGGTGCTGCCAAGAACTCACAGTATCC...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAAGGATACTGTGAGTTCTaGGCAGCACCAATGAATATC +
Preference number: 3 (lower is better)
Translates to: YSLPEVINASVNTKRVSEGYCEF*AAPMNI
Trigger: GATATTCATTGGTGCTGCCAAGAACTCACAGTATCC...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTTTTTCCCTTCCTCACTaGTTCCTAGCCAAAAGATGG +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISFSLPH*FLAKRW
Trigger: CCATCTTTTGGCTAGGAACAAGTGAGGAAGGGAAAA...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATCTACACTTATTGGTGTaGCTCTGGGTAAGTTTAAGA +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDLHLLV*LWVSLR
Trigger: TCTTAAACTTACCCAGAGCAACACCAATAAGTGTAG...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTCTAATCCTACACTTATaGGTGTTGCTCTGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFLILHL*VLLWVS
Trigger: ACTTACCCAGAGCAACACCAATAAGTGTAGGATTAG...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTACCCTCCAGGATTCTTaGAAATTGATGTTGAGGTCC +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISTLQDS*KLMLRS
Trigger: GGACCTCAACATCAATTTCAAAGAATCCTGGAGGGT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGCCTTTATATGTTACTaGACCTTTTCCCCTTACTGC +
Preference number: 3 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIAFICY*TFSPYC
Trigger: GCAGTAAGGGGAAAAGGTCAAGTAACATATAAAGGC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGCATTTGTGTTCTCTTaGGATCTGTATTACCTCTGT +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDAFVFS*DLYYLC
Trigger: ACAGAGGTAATACAGATCCAAAGAGAACACAAATGC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp TACCTGAAAGATCTGTTTGGATTTTTCTGTTTATTCTaGGGAGGATCTGCAGTGGCTATAAACTGGCAGTTT +
Preference number: 3 (lower is better)
Translates to: YLKDLFGFFCLF*GGSAVAINWQF
Trigger: AAACTGCCAGTTTATAGCCACTGCAGATCCTCCTCAGAATAAACAGAAAAATCCAAACAGATCTTTCAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp TCAGGCAGCTTTAGAGAGCAGTTCAATTGCTCTACCTaGAAGATCTGTTTGGATTTTTCTGTTTATTCTGAG +
Preference number: 3 (lower is better)
Translates to: SGSFREQFNCST*KICLDFSVYSE
Trigger: CTCAGAATAAACAGAAAAATCCAAACAGATCTTTCAGGTAGAGCAATTGAACTGCTCTCTAAAGCTGCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp TCTTTCTTTTCTGGATTCACCATAGAGGTTTTCTGGTaGAAGGGTCAAATAAGTCTGTCTGGTATCCAAATA +
Preference number: 3 (lower is better)
Translates to: SFFSGFTIEVFW*KGQISLSGIQI
Trigger: TATTTGGATACCAGACAGACTTATTTGACCCTTCCACCAGAAAACCTCTATGGTGAATCCAGAAAAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTCTATTATCTGTAGGTTaGGTCTTCTCATTGTGTCCT +
Preference number: 3 (lower is better)
Translates to: CNFMRSHLSILDLTAQAILLSVG*VFSLCP
Trigger: AGGACACAATGAGAAGACCAAACCTACAGATAATAG...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTATTTGGAGGTCTATTaGGAGTCTATTTGGAGTTCT +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDYLEVY*ESIWSS
Trigger: AGAACTCCAAATAGACTCCAAATAGACCTCCAAATA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATCTATTTGGAGTCTATTaGGAATTCTATTTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDLFGVY*EFYLEV
Trigger: GACCTCCAAATAGAATTCCAAATAGACTCCAAATAG...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGCATTTGTGTTCTCTTaGGATCTGTATTACCTCTGT +
Preference number: 3 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIAFVFS*DLYYLC
Trigger: ACAGAGGTAATACAGATCCAAAGAGAACACAAATGC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATTTGTCATGGAATACCTaGGTTTCTCCATGTATGATA +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDLSWNT*VSPCMI
Trigger: TATCATACATGGAGAAACCAAGGTATTCCATGACAA...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGGTATGATGTGTGCTTaGAGCTTTACTAAAGTTTCT +
Preference number: 3 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDGMMCA*SFTKVS
Trigger: AGAAACTTTAGTAAAGCTCAAAGCACACATCATACC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp CCATCCTTGTGTTGGAATTTTCACTTTATTAGCCTTTaGAGGGCTGGATTCATGGAAAGATATTGTGTGAAT +
Preference number: 3 (lower is better)
Translates to: PSLCWNFHFISL*RAGFMERYCVN
Trigger: ATTCACACAATATCTTTCCATGAATCCAGCCCTTCAAAGGCTAATAAAGTGAAAATTCCAACACAAGGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp CCTTCTTTACTATTACTGACAAGGTTTTTCCTCCTGTaGTTAACTAGGATATTTAATGGGGTAGATTCAGTC +
Preference number: 3 (lower is better)
Translates to: PSLLLLTRFFLL*LTRIFNGVDSV
Trigger: GACTGAATCTACCCCATTAAATATCCTAGTTAACCACAGGAGGAAAAACCTTGTCAGTAATAGTAAAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp TTGGAATTCTATTTGGAGGTCTATTTGGAGTCTATTTaGAGTTCTATAGGCTTCTTGTATGTTCATGGCCAT +
Preference number: 3 (lower is better)
Translates to: LEFYLEVYLESI*SSIGFLYVHGH
Trigger: ATGGCCATGAACATACAAGAAGCCTATAGAACTCCAAATAGACTCCAAATAGACCTCCAAATAGAATTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTCTACACTTATTGGTGTaGCTCTGGGTAAGTTTAAGA +
Preference number: 3 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISLHLLV*LWVSLR
Trigger: TCTTAAACTTACCCAGAGCAACACCAATAAGTGTAG...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAACTACACTTATTGGTGTaGCTCTGGGTAAGTTTAAGA +
Preference number: 3 (lower is better)
Translates to: YSLPEVINASVNTKRVSELHLLV*LWVSLR
Trigger: TCTTAAACTTACCCAGAGCAACACCAATAAGTGTAG...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGATATCAGAGATTATTaGTTGTGCTCTGTGGGTAAT +
Preference number: 3 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIDIRDY*LCSVGN
Trigger: ATTACCCACAGAGCACAACAAATAATCTCTGATATC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTCTATTTGGAGTCTATTaGGAATTCTATTTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: CNFMRSHLSILDLTAQAILFGVY*EFYLEV
Trigger: GACCTCCAAATAGAATTCCAAATAGACTCCAAATAG...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR-3UTR CAA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTTTGTCATGGAATACCTaGGTTTCTCCATGTATGATA +
Preference number: 3 (lower is better)
Translates to: CNFMRSHLSILDLTAQAILSWNT*VSPCMI
Trigger: TATCATACATGGAGAAACCAAGGTATTCCATGACAA...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp AGGCTTTCTTTACCATATACCGAAATCCACCTCCAATaGCACACATGTAGCCATATGAAATTTTATTGTTGT +
Preference number: 3 (lower is better)
Translates to: RLSLPYTEIHLQ*HTCSHMKFYCC
Trigger: ACAACAATAAAATTTCATATGGCTACATGTGTGTCATTGGAGGTGGATTTCGGTATATGGTAAAGAAAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp GTCTTTTGCCTTATAGATAGATCCTTTGTAATTTTATaGGGTCCCATTTGTCGATTCTTGATCTTACAGCAC +
Preference number: 3 (lower is better)
Translates to: VFCLIDRSFVIL*GPICRFLILQH
Trigger: GTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACAAAGGATCTATCTATAAGGCAAAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp GCTAATAAATCTTTAATGGTCAGTGCTCTTAACCGCTaGACTAAATCTCTAGCCCCATGGTCAATTATTATT +
Preference number: 3 (lower is better)
Translates to: ANKSLMVSALNR*TKSLAPWSIII
Trigger: AATAATAATTGACCATGGGGCTAGAGATTTAGTTCAGCGGTTAAGAGCACTGACCATTAAAGATTTATTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp CAGAGATTTAGGCTTGTAATTGAGCCATATCATGAGTaGTATCATTGTCCTTCCAAATTCCCTCATTTTAAT +
Preference number: 3 (lower is better)
Translates to: QRFRLVIEPYHE*YHCPSKFPHFN
Trigger: ATTAAAATGAGGGAATTTGGAAGGACAATGATATCACTCATGATATGGCTCAATTACAAGCCTAAATCTCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR TCA 72 bp CCGAAATCCACCTCCAATGACACACATGTAGCCATATaGAATTTTATTGTTGTGGAAGTTTTTATCTATCAT +
Preference number: 3 (lower is better)
Translates to: PKSTSNDTHVAI*NFIVVEVFIYH
Trigger: ATGATAGATAAAAACTTCCACAACAATAAAATTTCATATGGCTACATGTGTGTCATTGGAGGTGGATTTCGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CCA 72 bp GTTATTTTTGTTGTTAGAGTTCAGGTTCTGTTCTTGTaGCTGTCTTCTTTTAGGTTCATTGAAGGATTACTT +
Preference number: 3 (lower is better)
Translates to: VIFVVRVQVLFL*LSSFRFIEGLL
Trigger: AAGTAATCCTTCAATGAACCTAAAAGAAGACAGCCACAAGAACAGAACCTGAACTCTAACAACAAAAATAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGACAGATGGAGAGCCATaGACCCACTGCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRTDGEP*THCSSP
Trigger: TGGGCTGGAGCAGTGGGTCCATGGCTCTCCATCTGT...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR GCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGGAGCCATGGACCCACTaGTCCAGCCCATTAGACTCT +
Preference number: 4 (lower is better)
Translates to: SWESTSHLSFSGQSTLCREPWTH*SSPLDS
Trigger: AGAGTCTAATGGGCTGGAGCAGTGGGTCCATGGCTC...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR GCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGAGGAGGGGAGTTGTTTaGAAACCTGGAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQRRGVV*KPGAVK
Trigger: CTTCACAGCTCCAGGTTTGCAAACAACTCCCCTCCT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR TCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGATGACGTCTGTGGCTTaGGCTTTGTCCAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQMTSVA*ALSKWL
Trigger: CAACCATTTGGACAAAGCTCAAGCCACAGACGTCAT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR CCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTACAGATGGAGAGCCATaGACCCACTGCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSTDGEP*THCSSP
Trigger: TGGGCTGGAGCAGTGGGTCCATGGCTCTCCATCTGT...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp ATGAAGGCCCGAAGGGTCCCTATCCAAGAAGCTCTGTaGCTTCTGCTGCCCACATGCTCTCAAGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: MKARRVPIQEAL*LLLPTCSQVIP
Trigger: TGGGATCACTTGAGAGCATGTGGGCAGCAGAAGCAACAGAGCTTCTTGGATAGGGACCCTTCGGGCCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR TCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGATGACGTCTGTGGCTTaGGCTTTGTCCAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRMTSVA*ALSKWL
Trigger: CAACCATTTGGACAAAGCTCAAGCCACAGACGTCAT...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR CCA 90 bp TGGGATGGATCCCCCAGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGAAGACATTAGGAGGATaGACATCTCTGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: WDGSPSGAVSGWSILSSQKTLGG*TSLLIR
Trigger: TCTGATCAGCAGAGATGTCCATCCTCCTAATGTCTT...CTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCACTGGGGGATCCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR GCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTAGGAGGGGAGTTGTTTaGAAACCTGGAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSRRGVV*KPGAVK
Trigger: CTTCACAGCTCCAGGTTTGCAAACAACTCCCCTCCT...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR GCA 90 bp CAGCGTGTCCCCCTAGCAGCTCAGAGTCATGACTCTGATATGCACATTATCTCCAGGAGGGGAGTTGTTTaGAAACCTGGAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QRVPLAAQSHDSDMHIISRRGVV*KPGAVK
Trigger: CTTCACAGCTCCAGGTTTGCAAACAACTCCCCTCCT...GGAGATAATGTGCATATCAGAGTCATGACTCTGAGCTGCTAGGGGGACACGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTATGACGTCTGTGGCTTaGGCTTTGTCCAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSMTSVA*ALSKWL
Trigger: CAACCATTTGGACAAAGCTCAAGCCACAGACGTCAT...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR CCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTAAGACATTAGGAGGATaGACATCTCTGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: LTRPSSATYAARDTSSGGKTLGG*TSLLIR
Trigger: TCTGATCAGCAGAGATGTCCATCCTCCTAATGTCTT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR CCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGAAGACATTAGGAGGATaGACATCTCTGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRKTLGG*TSLLIR
Trigger: TCTGATCAGCAGAGATGTCCATCCTCCTAATGTCTT...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp AGTGGTCAGAGTACTCTCTGCAGGCAAGCTCTCCTCTaGCAGGAAAGATGTCCAGAAGTCTATAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SGQSTLCRQALL*QERCPEVYSSE
Trigger: CTCTGAGCTATAGACTTCTGGACATCTTTCCTGCAAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TGGCACAAGACCCTCCAGGATTCTTTGAAATTGATGTaGAGGTCCACTTGCCCATTATTCCGAGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: WHKTLQDSLKLM*RSTCPLFRDLG
Trigger: ACCCAGGTCTCGGAATAATGGGCAAGTGGACCTCAACATCAATTTCAAAGAATCCTGGAGGGTCTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TCCTGCTGGCACAAGACCCTCCAGGATTCTTTGAAATaGATGTTGAGGTCCACTTGCCCATTATTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: SCWHKTLQDSLK*MLRSTCPLFRD
Trigger: GTCTCGGAATAATGGGCAAGTGGACCTCAACATCAATTTCAAAGAATCCTGGAGGGTCTTGTGCCAGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp CCCTGTTCCTGCTGGCACAAGACCCTCCAGGATTCTTaGAAATTGATGTTGAGGTCCACTTGCCCATTATTC +
Preference number: 4 (lower is better)
Translates to: PCSCWHKTLQDS*KLMLRSTCPLF
Trigger: GAATAATGGGCAAGTGGACCTCAACATCAATTTCAAAGAATCCTGGAGGGTCTTGTGCCAGCAGGAACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR TCA 90 bp TCCTGGGAGTCCACCTCTCACCTGAGTTTCAGTGGTCAGAGTACTCTCTGCAGGAATCATGTGTCACTGTaGAACCTGTGTAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SWESTSHLSFSGQSTLCRNHVSL*NLCRKK
Trigger: TTTCTTTCTACACAGGTTTCACAGTGACACATGATT...CCTGCAGAGAGTACTCTGACCACTGAAACTCAGGTGAGAGGTGGACTCCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR TCA 90 bp CTGACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCTGGGGGTAATCATGTGTCACTGTaGAACCTGTGTAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: LTRPSSATYAARDTSSGGNHVSL*NLCRKK
Trigger: TTTCTTTCTACACAGGTTTCACAGTGACACATGATT...ACCCCCAGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR CCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATACAGATGGAGAGCCATaGACCCACTGCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDTDGEP*THCSSP
Trigger: TGGGCTGGAGCAGTGGGTCCATGGCTCTCCATCTGT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR TCA 90 bp GCAGGATACTGTGAGTTCTTGGCAGCACCAATGAATATCCTGCTGCTTAACAAGCATCACGAAGAGTCATaGGAGAGAGGAAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: AGYCEFLAAPMNILLLNKHHEES*ERGKAI
Trigger: AATGGCTTTTCCTCTCTCTCATGACTCTTCGTGATG...CTTGTTAAGCAGCAGGATATTCATTGGTGCTGCCAAGAACTCACAGTATCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR TCA 90 bp TGGGGCAGTCTCTGGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGACTCTAATCATGTGTCACTGTaGAACCTGTGTAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: WGSLWMVHPFVSAPNFDSNHVSL*NLCRKK
Trigger: TTTCTTTCTACACAGGTTTCACAGTGACACATGATT...AGAGTCAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAGACTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR GCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATGAGCCATGGACCCACTaGTCCAGCCCATTAGACTCT +
Preference number: 4 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDEPWTH*SSPLDS
Trigger: AGAGTCTAATGGGCTGGAGCAGTGGGTCCATGGCTC...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TATTTCATGGCAGAGGGCATGCTCCTCACCACCTTTTaGTCTCCTCATCTTTCAGAGGGGTTCCATTCATTT +
Preference number: 4 (lower is better)
Translates to: YFMAEGMLLTTF*SPHLSEGFHSF
Trigger: AAATGAATGGAACCCCTCTGAAAGATGAGGAGACAAAAAGGTGGTGAGGAGCATGCCCTCTGCCATGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp GAGAGTTTTGCTGGGTATAATAGCCTGGGCTGGCATTaGTGTTCTCTTTGGATCTGTATTACCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ESFAGYNSLGWH*CSLWICITSVQ
Trigger: CTGGACAGAGGTAATACAGATCCAAAGAGAACACAAATGCCAGCCCAGGCTATTATACCCAGCAAAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR GCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGAGCCATGGACCCACTaGTCCAGCCCATTAGACTCT +
Preference number: 4 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIEPWTH*SSPLDS
Trigger: AGAGTCTAATGGGCTGGAGCAGTGGGTCCATGGCTC...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp CCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATaGGTGTTCTGTTCAGGAATTTTTCCCTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PICRFLILQHKP*VFCSGIFPCAH
Trigger: ATGGGCACAGGGAAAAATTCCTGAACAGAACACCAATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp AACCATCAGACTGATTTCCTGAGTGGTTGTACAAACTaGCAATCCCACCAGCAATGGAGGAGTGTTACTCTT +
Preference number: 4 (lower is better)
Translates to: NHQTDFLSGCTN*QSHQQWRSVTL
Trigger: AAGAGTAACACTCCTCCATTGCTGGTGGGATTGCAAGTTTGTACAACCACTCAGGAAATCAGTCTGATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR GCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAAGAGCCATGGACCCACTaGTCCAGCCCATTAGACTCT +
Preference number: 4 (lower is better)
Translates to: YSLPEVINASVNTKRVSEEPWTH*SSPLDS
Trigger: AGAGTCTAATGGGCTGGAGCAGTGGGTCCATGGCTC...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR GCA 90 bp TGCCTATGCTACCTAGAAAACATGTCCCCAACCCTAGAATTCATTAAGGTAAAGAGGACATGCTTGTGGTaGTTATACAGATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: CLCYLENMSPTLEFIKVKRTCLW*LYRWRA
Trigger: GGCTCTCCATCTGTATAAGCACCACAAGCATGTCCT...CTTTACCTTAATGAATTCTAGGGTTGGGGACATGTTTTCTAGGTAGCATAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp CATCTACTCCTATTATCTGTAGGTTTGGTCTTCTCATaGTGTCCTGGATTTCCTGGATGTTTTGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: HLLLLSVGLVFS*CPGFPGCFGLG
Trigger: CCCTAACCCAAAACATCCAGGAAATCCAGGACACAATGAGAAGACCAAACCTACAGATAATAGGAGTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTaGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CKCTTFSVSIPL*RDIWVLSSFWL
Trigger: TAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR TCA 90 bp AGTGACCATAGGTGTGTGGGTTCATTTCTGTGTCTTGAAATCTATTCCATTGATATGACGTCTGTGGCTTaGGCTTTGTCCAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: SDHRCVGSFLCLEIYSIDMTSVA*ALSKWL
Trigger: CAACCATTTGGACAAAGCTCAAGCCACAGACGTCAT...ATCAATGGAATAGATTTCAAGACACAGAAATGAACCCACACACCTATGGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR CCA 90 bp ACCTGTTTGGTTGTGTTTTCCTGTAATTCTTTAAGGGCTTCCCTGTATTTCTTTTGGTGCTTATACAGATaGAGAGCCATGGACCCACTG +
Preference number: 4 (lower is better)
Translates to: TCLVVFSCNSLRASLYFFWCLYR*RAMDPL
Trigger: CAGTGGGTCCATGGCTCTCCATCTGTATAAGCACCA...AAAGAAATACAGGGAAGCCCTTAAAGAATTACAGGAAAACACAACCAAACAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR CCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTTGGTGCTTATACAGATaGAGAGCCATGGACCCACTG +
Preference number: 4 (lower is better)
Translates to: CNFMRSHLSILDLTAQAIWCLYR*RAMDPL
Trigger: CAGTGGGTCCATGGCTCTCCATCTGTATAAGCACCA...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp CCACATCCTTGTCAGCATCTGCTGTCACCTGAATTTTaGATCTTAGCTATTCTGAATGGTATGAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PHPCQHLLSPEF*ILAILNGMRWN
Trigger: ATTCCACCTCATACCATTCAGAATAGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGACAAGGATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR GCA 90 bp TATTCTCTTCCAGAGGTAATTAATGCATCTGTAAATACCAAGAGGGTATCAGAAAGGAGGGGAGTTGTTTaGAAACCTGGAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: YSLPEVINASVNTKRVSERRGVV*KPGAVK
Trigger: CTTCACAGCTCCAGGTTTGCAAACAACTCCCCTCCT...TTCTGATACCCTCTTGGTATTTACAGATGCATTAATTACCTCTGGAAGAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TGTCCAGCTATGCTATCTTGTTCTCACGATCTGGCTTaGGGGTTAAAAACTGAAATAGTGATCTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: CPAMLSCSHDLA*GLKTEIVICDS
Trigger: ACTATCACAGATCACTATTTCAGTTTTTAACCCCAAAGCCAGATCGTGAGAACAAGATAGCATAGCTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TGGGGTTTTATGTGGAGTTCCTTGATCCACTTAAGCTaGAGCTTTGTACAGGAGATAAGAATGGATCAATTC +
Preference number: 4 (lower is better)
Translates to: WGFMWSSLIHLS*SFVQEIRMDQF
Trigger: GAATTGATCCATTCTTATCTCCTGTACAAAGCTCAAGCTTAAGTGGATCAAGGAACTCCACATAAAACCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp ACCACACTCAGGATGATACCCTCCAGGTCCATCCATTaGCCTAAGAATTTCATTAATTCACTGTTGTTAATA +
Preference number: 4 (lower is better)
Translates to: TTLRMIPSRSIH*PKNFINSLLLI
Trigger: TATTAACAACAGTGAATTAATGAAATTCTTAGGCAAATGGATGGACCTGGAGGGTATCATCCTGAGTGTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR CCA 90 bp ATTCTGTTGCTGATGCTCACATCTATAGTTTCTGATTTCTTTCCTAGGATTTCTAAGACATTAGGAGGATaGACATCTCTGCTGATCAGA +
Preference number: 4 (lower is better)
Translates to: ILLLMLTSIVSDFFPRISKTLGG*TSLLIR
Trigger: TCTGATCAGCAGAGATGTCCATCCTCCTAATGTCTT...AGAAATCCTAGGAAAGAAATCAGAAACTATAGATGTGAGCATCAGCAACAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TTTGGAATTCTATTTGGAGGTCTATTTGGAGTCTATTaGGAGTTCTATAGGCTTCTTGTATGTTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: FGILFGGLFGVY*EFYRLLVCSWP
Trigger: TGGCCATGAACATACAAGAAGCCTATAGAACTCCAAATAGACTCCAAATAGACCTCCAAATAGAATTCCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp CCAAACTTTGACTCTGTAACTCTTTCAATGAGTATTTaGTTCCCCATTTTAAGGAGGGACAAAGAATCCACA +
Preference number: 4 (lower is better)
Translates to: PNFDSVTLSMSI*FPILRRDKEST
Trigger: TGTGGATTCTTTGTCCCTCCTTAAAATGGGGAACAAAATACTCATTGAAAGAGTTACAGAGTCAAAGTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS-3UTR TCA 90 bp TGTAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTAATCATGTGTCACTGTaGAACCTGTGTAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: CNFMRSHLSILDLTAQAINHVSL*NLCRKK
Trigger: TTTCTTTCTACACAGGTTTCACAGTGACACATGATT...AATGGCTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATAAAATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TTCGGAGGTCTATTTGGAGTCTATTTGGAATTCTATTaGGAGGTCTATTTGGAGTCTATTTGGAGTTCTATA +
Preference number: 4 (lower is better)
Translates to: FGGLFGVYLEFY*EVYLESIWSSI
Trigger: TATAGAACTCCAAATAGACTCCAAATAGACCTCCAAATAGAATTCCAAATAGACTCCAAATAGACCTCCGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp GCTGGATTCATGGAAAGATATTGTGTGAATTTGGTTTaGTCATGGAATACCTTGGTTTCTCCATGTATGATA +
Preference number: 4 (lower is better)
Translates to: AGFMERYCVNLV*SWNTLVSPCMI
Trigger: TATCATACATGGAGAAACCAAGGTATTCCATGACAAAACCAAATTCACACAATATCTTTCCATGAATCCAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TTTCTGGAGTCCAGCTTCTTGAGTTCTTTGTATATATaGGAAATTAGATCCCTATCGGATTTAGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: FLESSFLSSLYI*EIRSLSDLGLE
Trigger: TTCCAATCCTAAATCCGATAGGGATCTAATTTCCAATATATACAAAGAACTCAAGAAGCTGGACTCCAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp TTTGGAGTCTATTTGGAATTCTATTTGGAGGTCTATTaGGAGTCTATTTGGAGTTCTATAGGCTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: FGVYLEFYLEVY*ESIWSSIGFLY
Trigger: ATACAAGAAGCCTATAGAACTCCAAATAGACTCCAAATAGACCTCCAAATAGAATTCCAAATAGACTCCAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp ATTGGCGTTCTAATTATTATGTGTTCGGAGGTCTATTaGGAGTCTATTTGGAATTCTATTTGGAGGTCTATT +
Preference number: 4 (lower is better)
Translates to: IGVLIIMCSEVY*ESIWNSIWRSI
Trigger: AATAGACCTCCAAATAGAATTCCAAATAGACTCCAAATAGACCTCCGAACACATAATAATTAGAACGCCAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
3UTR CAA 72 bp ATTCTGAATGGTATGAGGTGGAATCTCAGGATTATTTaGATTTGCATTTCCCTGATGATTAAGGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: ILNGMRWNLRII*ICISLMIKDVE
Trigger: TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAATAATCCTGAGATTCCACCTCATACCATTCAGAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS CCA 90 bp ATGAGAACATTAACAATCCAGAAAAGGAGAAGAAAGGGAAGAACTTaGCATGACGTCTGTGGCTTGAGCTTTGTCCAAATGGTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: MRTLTIQKRRRKGRT*HDVCGLSFVQMVVL
Trigger: CAGGACAACCATTTGGACAAAGCTCAAGCCACAGACGTCATGCCAAGTTCTTCCCTTTCTTCTCCTTTTCTGGATTGTTAATGTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074992.2
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS CCA 90 bp GTGACTCCTGTGCTACAAATAATGATCAGATTAGATAATGCCAAGTaGATGAGAATAAGATCTATCGGTCTTTTCTCAGTCCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: VTPVLQIMIRLDNAK*MRIRSIGLFSVPKA
Trigger: TGCCTTGGGGACTGAGAAAAGACCGATAGATCTTATTCTCATCCACTTGGCATTATCTAATCTGATCATTATTTGTAGCACAGGAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074992.2
ENSMUST00000226692.2
ENSMUST00000227050.2
CDS CAA 72 bp AGAAGAAAGGGAAGAACTTGGCATGACGTCTGTGGCTaGAGCTTTGTCCAAATGGTTGTCCTGGGACTGATG +
Preference number: 6 (lower is better)
Translates to: RRKGRTWHDVCG*SFVQMVVLGLM
Trigger: CATCAGTCCCAGGACAACCATTTGGACAAAGCTCAAGCCACAGACGTCATGCCAAGTTCTTCCCTTTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000074992.2
ENSMUST00000226692.2
ENSMUST00000227050.2
ENSMUST00000227160.2
ENSMUST00000227741.2
CDS CCA 72 bp GTGCTACAAATAATGATCAGATTAGATAATGCCAAGTaGATGAGAATAAGATCTATCGGTCTTTTCTCAGTC +
Preference number: 6 (lower is better)
Translates to: VLQIMIRLDNAK*MRIRSIGLFSV
Trigger: GACTGAGAAAAGACCGATAGATCTTATTCTCATCCACTTGGCATTATCTAATCTGATCATTATTTGTAGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074992.2
ENSMUST00000226692.2
ENSMUST00000227050.2