RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R217 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000115791

Ensembl transcript IDs: ENSMUST00000091721.3, ENSMUST00000227110.2, ENSMUST00000228656.2

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGAGGCAGCCTGGGTCTGGATATCACCATGACCCAAGATGGCAGTaGAAGCCACTGAGAGCAGTTTATCAGGGAGCAGAAGGACCCCTG +
Preference number: 1 (lower is better)
Translates to: WRQPGSGYHHDPRWQ*KPLRAVYQGAEGPL
Trigger: CAGGGGTCCTTCTGCTCCCTGATAAACTGCTCTCAGTGGCTTGCACTGCCATCTTGGGTCATGGTGATATCCAGACCCAGGCTGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 90 bp CTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTGTATCCTGGTaGCTCTGGGTGGGTCGCTCTTGGGCCAAGAATTTGAGCAGAAGT +
Preference number: 1 (lower is better)
Translates to: LKDPVPSCSLVTVSW*LWVGRSWAKNLSRS
Trigger: ACTTCTGCTCAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 90 bp AACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTGTATCCTaGTGGCTCTGGGTGGGTCGCTCTTGGGCCAAGAATTTGAGCAGA +
Preference number: 1 (lower is better)
Translates to: NLKDPVPSCSLVTVS*WLWVGRSWAKNLSR
Trigger: TCTGCTCAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 90 bp GATCCTGTCCCCAGCTGTTCCTTGGTTACTGTATCCTGGTGGCTCTaGGTGGGTCGCTCTTGGGCCAAGAATTTGAGCAGAAGTAGTGTT +
Preference number: 1 (lower is better)
Translates to: DPVPSCSLVTVSWWL*VGRSWAKNLSRSSV
Trigger: AACACTACTTCTGCTCAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAGTAACCAAGGAACAGCTGGGGACAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 90 bp GTGACCTGTTCCTTTATCACCTGCGGCCTTTTCTCCTCCTGTCATTaGCCTAGCATCTCCAGATCTGCCTCACTTATACCACTCTGCTCG +
Preference number: 1 (lower is better)
Translates to: VTCSFITCGLFSSCH*PSISRSASLIPLCS
Trigger: CGAGCAGAGTGGTATAAGTGAGGCAGATCTGGAGATGCTAGGGCAATGACAGGAGGAGAAAAGGCCGCAGGTGATAAAGGAACAGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 90 bp CTGTATCCTGGTGGCTCTGGGTGGGTCGCTCTTGGGCCAAGAATTTaGGCAGAAGTAGTGTTCTTACCTGTGCTCACAAGTATGTCTGCA +
Preference number: 1 (lower is better)
Translates to: LYPGGSGWVALGPRI*AEVVFLPVLTSMSA
Trigger: TGCAGACATACTTGTGAGCACAGGTAAGAACACTACTTCTGCTCAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 90 bp ATTGGTTATGGAGAGCTGTGGCCCTGGATTAGTTCTGGGTGCAGATaGAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTGT +
Preference number: 1 (lower is better)
Translates to: IGYGELWPWISSGCR*KPEGSCPQLFLGYC
Trigger: ACAGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAGAACTAATCCAGGGCCACAGCTCTCCATAACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 90 bp TGTCATTGCCCTAGCATCTCCAGATCTGCCTCACTTATACCACTCTaGTCGGCAGTCTCTCCTGCCTCTCTATCTCACATTCGTTCATTG +
Preference number: 1 (lower is better)
Translates to: CHCPSISRSASLIPL*SAVSPASLSHIRSL
Trigger: CAATGAACGAATGTGAGATAGAGAGGCAGGAGAGACTGCCGAGCAGAGTGGTATAAGTGAGGCAGATCTGGAGATGCTAGGGCAATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 90 bp TCTGCATTTCTGGGAGGTCAATTCTCTTCCAATGCTTTTGGGATATaGATCGCTGTGGCACAGGATCAGCTCCTGGTGGCTGTAAGTCTG +
Preference number: 1 (lower is better)
Translates to: SAFLGGQFSSNAFGI*IAVAQDQLLVAVSL
Trigger: CAGACTTACAGCCACCAGGAGCTGATCCTGTGCCACAGCGATCCATATCCCAAAAGCATTGGAAGAGAATTGACCTCCCAGAAATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 90 bp GCTCACAAGTATGTCTGCATTTCTGGGAGGTCAATTCTCTTCCAATaGTTTTGGGATATGGATCGCTGTGGCACAGGATCAGCTCCTGGT +
Preference number: 1 (lower is better)
Translates to: AHKYVCISGRSILFQ*FWDMDRCGTGSAPG
Trigger: ACCAGGAGCTGATCCTGTGCCACAGCGATCCATATCCCAAAAGCATTGGAAGAGAATTGACCTCCCAGAAATGCAGACATACTTGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 90 bp CCCTTTAAACAAACAAAACACAAAGTCTCACAAGTAGGATCTGACTaGCTTCAAAGTCACAGTCCTCTTGCCTCTGCCTCTCAAGTGCTG +
Preference number: 1 (lower is better)
Translates to: PFKQTKHKVSQVGSD*LQSHSPLASASQVL
Trigger: CAGCACTTGAGAGGCAGAGGCAAGAGGACTGTGACTTTGAAGCCAGTCAGATCCTACTTGTGAGACTTTGTGTTTTGTTTGTTTAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 90 bp CACAGTCATTTGATGATCTTCCCCAACAGATGCAGGCTCCAGGCATaGATGTGCTACACAGACATACATGTATGCAAACTGTTGATACAC +
Preference number: 1 (lower is better)
Translates to: HSHLMIFPNRCRLQA*MCYTDIHVCKLLIH
Trigger: GTGTATCAACAGTTTGCATACATGTATGTCTGTGTAGCACATTCATGCCTGGAGCCTGCATCTGTTGGGGAAGATCATCAAATGACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 90 bp CTGTCTGAGATCTGCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTaGGAAGTCTGGTGTAATTCTAATATGCCTACCTTTATATGTTAC +
Preference number: 1 (lower is better)
Translates to: LSEICPGSSSFHSLW*EVWCNSNMPTFICY
Trigger: GTAACATATAAAGGTAGGCATATTAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGCAGATCTCAGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 90 bp AATTTGAGCAGAAGTAGTGTTCTTACCTGTGCTCACAAGTATGTCTaGATTTCTGGGAGGTCAATTCTCTTCCAATGCTTTTGGGATATG +
Preference number: 1 (lower is better)
Translates to: NLSRSSVLTCAHKYV*ISGRSILFQCFWDM
Trigger: CATATCCCAAAAGCATTGGAAGAGAATTGACCTCCCAGAAATGCAGACATACTTGTGAGCACAGGTAAGAACACTACTTCTGCTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 90 bp TTGTATCTGTTGAGGCCTGTTTTATGGCTGATTATATGGTCCTTTTaGAGAAGGTACCATGAGGTGTTGAGTAGAAGGTATAGTCCTTTG +
Preference number: 1 (lower is better)
Translates to: LYLLRPVLWLIIWSF*RRYHEVLSRRYSPL
Trigger: CAAAGGACTATACCTTCTACTCAACACCTCATGGTACCTTCTCCAAAAGGACCATATAATCAGCCATAAAACAGGCCTCAACAGATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 90 bp ATACCTGCTGCTGGTTCACATAAAGAGAATGTTATCTCAATTCATTaGATGTGTAAAGCATGCTTCTATAGTATGACCCACGTGTTCCCC +
Preference number: 1 (lower is better)
Translates to: IPAAGSHKENVISIH*MCKACFYSMTHVFP
Trigger: GGGGAACACGTGGGTCATACTATAGAAGCATGCTTTACACATTCAATGAATTGAGATAACATTCTCTTTATGTGAACCAGCAGCAGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 90 bp TCAATCTTCTTGTATCTGTTGAGGCCTGTTTTATGGCTGATTATATaGTCCTTTTGGAGAAGGTACCATGAGGTGTTGAGTAGAAGGTAT +
Preference number: 1 (lower is better)
Translates to: SIFLYLLRPVLWLII*SFWRRYHEVLSRRY
Trigger: ATACCTTCTACTCAACACCTCATGGTACCTTCTCCAAAAGGACCATATAATCAGCCATAAAACAGGCCTCAACAGATACAAGAAGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 90 bp TCACCCTCTTCATTTCCAATTTTGTTCATTTGGATACTGTCTCTGTaGCCTCTGATTAGTCTGGCTAAGGGTTTATCTATCCTGTTGATT +
Preference number: 1 (lower is better)
Translates to: SPSSFPILFIWILSL*PLISLAKGLSILLI
Trigger: AATCAACAGGATAGATAAACCCTTAGCCAGACTAATCAGAGGTCACAGAGACAGTATCCAAATGAACAAAATTGGAAATGAAGAGGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 90 bp ACACATGTGCCCACACACTTATTCTCTGCAGTCTCTGATAGTATCTaGGCATTTCCTCTCACATCAATGGGACCTTTAATCTTTATTTTT +
Preference number: 1 (lower is better)
Translates to: THVPTHLFSAVSDSI*AFPLTSMGPLIFIF
Trigger: AAAAATAAAGATTAAAGGTCCCATTGATGTGAGAGGAAATGCTCAGATACTATCAGAGACTGCAGAGAATAAGTGTGTGGGCACATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 90 bp AGTAGTGATTTTTCCAGGTTCCATGTGTTTGTATACTTACTGCTGTaGCTGCTGTTGTTATTGCTATCTAGCTTTAATCCAATGCTCCTA +
Preference number: 1 (lower is better)
Translates to: SSDFSRFHVFVYLLL*LLLLLLSSFNPMLL
Trigger: TAGGAGCATTGGATTAAAGCTAGATAGCAATAACAACAGCAGGCACAGCAGTAAGTATACAAACACATGGAACCTGGAAAAATCACTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 90 bp CCTATTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTaGATATTGTTGGTTGGGAGCAATTTCTTTGAGTGTTGTGTCAAT +
Preference number: 1 (lower is better)
Translates to: PIILRFGLPIVSWIS*ILLVGSNFFECCVN
Trigger: ATTGACACAACACTCAAAGAAATTGCTCCCAACCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp CTGGGTGCAGATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTaGGTTACTGTATCCTGGTGGCTCTGGGTGGGTCGCTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: LGADENLKDPVPSCS*VTVSWWLWVGRSWA
Trigger: GGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTGGACCCCTGGAACAATaGCCCAGGCAAAAGCACAGA +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFGPLEQ*PRQKHR
Trigger: TCTGTGCTTTTGCCTGGGCCATTGTTCCAGGGGTCC...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTGAGCAGAAGGACCCCTaGAACAATGGCCCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFEQKDP*NNGPGK
Trigger: TTTGCCTGGGCCATTGTTCCAGGGGTCCTTCTGCTC...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGTATCCTGGTGGCTCTaGGTGGGTCGCTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGVSWWL*VGRSWA
Trigger: GGCCCAAGAGCGACCCACCCAGAGCCACCAGGATAC...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTCTCACACCACCAGATTaGATCATGGGGCATTGCGCA +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFLTPPD*IMGHCA
Trigger: TGCGCAATGCCCCATGATGCAATCTGGTGGTGTGAG...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTGACCCAAGATGGCAGTaGAAGCCACTGAGAGCAGTT +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFDPRWQ*KPLRAV
Trigger: AACTGCTCTCAGTGGCTTGCACTGCCATCTTGGGTC...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp ACTGTATCCTGGTGGCTCTGGGTGGGTCGCTCTTGGGCCAAGAATTaGAGCAGAAGTAGTGTTCTTACCTGTGCTCACAAGTATGTCTGC +
Preference number: 2 (lower is better)
Translates to: TVSWWLWVGRSWAKN*SRSSVLTCAHKYVC
Trigger: GCAGACATACTTGTGAGCACAGGTAAGAACACTACTTCTGCTCAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTCTGGAACCTCACAGATaGCTCCTCTCAGTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFLEPHR*LLSVFL
Trigger: CAGGAAAACTGAGAGGAGTCATCTGTGAGGTTCCAG...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGCTCTGTGGGTCTGTCTaGGATCTGCCCAGGATCTTC +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGLCGSV*DLPRIF
Trigger: GAAGATCCTGGGCAGATCTCAGACAGACCCACAGAG...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp CTGGGTGCAGATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTCTGTGGAGATCAACCTaGGCATTAACAATGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LGADENLKDPVPSCSLVTLWRST*ALTMSR
Trigger: CCTGCTCATTGTTAATGCCCAGGTTGATCTCCACAG...AGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp CTCTCCTGCCTCTCTATCTCACATTCGTTCATTGTAGTGGTACTGGGAGTTGTGCACCATGACCCAAGATaGCAGTGCAAGCCACTGAGA +
Preference number: 2 (lower is better)
Translates to: LSCLSISHSFIVVVLGVVHHDPR*QCKPLR
Trigger: TCTCAGTGGCTTGCACTGCCATCTTGGGTCATGGTG...CACAACTCCCAGTACCACTACAATGAACGAATGTGAGATAGAGAGGCAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCGTATCCTGGTGGCTCTaGGTGGGTCGCTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSVSWWL*VGRSWA
Trigger: GGCCCAAGAGCGACCCACCCAGAGCCACCAGGATAC...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTAGAGTGGATTGGGGTTaGAGATGGGTCTATAAAGCA +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFRVDWG*RWVYKA
Trigger: TGCTTTATAGACCCATCTTCAACCCCAATCCACTCT...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp CTCTCCTGCCTCTCTATCTCACATTCGTTCATTGTAGTGGTACTGGGAGTTGTGCTGGAACCTCACAGATaGCTCCTCTCAGTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: LSCLSISHSFIVVVLGVVLEPHR*LLSVFL
Trigger: CAGGAAAACTGAGAGGAGTCATCTGTGAGGTTCCAG...CACAACTCCCAGTACCACTACAATGAACGAATGTGAGATAGAGAGGCAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp CTGGGTGCAGATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTCAACACCTTTGGATGTaGCCTGTTCCTTTATCACCT +
Preference number: 2 (lower is better)
Translates to: LGADENLKDPVPSCSLVTQHLWM*PVPLSP
Trigger: AGGTGATAAAGGAACAGGTCACATCCAAAGGTGTTG...AGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGTGCAGATGAAAACCTaGAGGATCCTGTCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGVQMKT*RILSPA
Trigger: AGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCAC...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTTCTTTCTTTCGTTCTTaGCCTTGCCTCTCACCATCT +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFSFFRS*PCLSPS
Trigger: AGATGGTGAGAGGCAAGGGCAAGAACGAAAGAAAGA...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTGGTACATTTCCTGTATaGAGCAAAATGCTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFGTFPV*SKMLGP
Trigger: AGGACCCAGCATTTTGCTGCATACAGGAAATGTACC...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TCCGTCTTAAGATCCTCTATCATCAGGAGATGTGCCCTTAAATCAGAGTCTTGTGGGAGCTGCGAAGAGTaGAGGGAGGAAATACTGCGC +
Preference number: 2 (lower is better)
Translates to: SVLRSSIIRRCALKSESCGSCEE*REEILR
Trigger: GCGCAGTATTTCCTCCCTCCACTCTTCGCAGCTCCC...ACAAGACTCTGATTTAAGGGCACATCTCCTGATGATAGAGGATCTTAAGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp CTGGGTGCAGATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTTTATTCCCTCCTGGATaGATCAAGGAGACTCACAAG +
Preference number: 2 (lower is better)
Translates to: LGADENLKDPVPSCSLVTLFPPG*IKETHK
Trigger: CTTGTGAGTCTCCTTGATCCATCCAGGAGGGAATAA...AGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp CTGGGTGCAGATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTCTTGGGCCAAGAATTTaGGCAGAAGTAGTGTTCTTA +
Preference number: 2 (lower is better)
Translates to: LGADENLKDPVPSCSLVTLGPRI*AEVVFL
Trigger: TAAGAACACTACTTCTGCTCAAATTCTTGGCCCAAG...AGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTATTGTGACAGGTTCCTaGTTAGACAGAAACCACTGT +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFIVTGS*LDRNHC
Trigger: ACAGTGGTTTCTGTCTAATCAGGAACCTGTCACAAT...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGTGGATTGTCCCTCCTaGAAGCATGTATCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGVDCPS*KHVSLS
Trigger: GGAGAGAGATACATGCTTGCAGGAGGGACAATCCAC...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGGGAGAAATTGGTTATaGAGAGCTGTGGCCCTGGAT +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGGRNWL*RAVALD
Trigger: ATCCAGGGCCACAGCTCTCCATAACCAATTTCTCCC...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp CTGCACTGGCTCCTCATTATAGGCCTTTTCTTCAGCATCTTCACGTaGCTAGTTCTTCCTCTCTCAACAGTGCACAAACTGTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LHWLLIIGLFFSIFT*LVLPLSTVHKLFSS
Trigger: GGAAGAGAACAGTTTGTGCACTGTTGAGAGAGGAAGAACTAGCAACGTGAAGATGCTGAAGAAAAGGCCTATAATGAGGAGCCAGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTAAGAGTAACCTCAACTaGGAAAATGCATTCCTGAGA +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFKSNLN*ENAFLR
Trigger: TCTCAGGAATGCATTTTCTCAGTTGAGGTTACTCTT...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGCCTCTGCCTCTCAAGTaGTGGAATAGACTGGTAAAC +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGPLPLK*WNRLVN
Trigger: GTTTACCAGTCTATTCCAGCACTTGAGAGGCAGAGG...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTACACTTGTGTCTGCTTaGTTCTTGGATCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFTLVSA*FLDPFS
Trigger: AGAAAATGGATCCAAGAAGCAAGCAGACACAAGTGT...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGACATGGCCCTCAGCTaGAGCACAAACAGAAAAATC +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGDMALS*STNRKI
Trigger: GATTTTTCTGTTTGTGCTGCAGCTGAGGGCCATGTC...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCGTTACTGTATCCTGGTaGCTCTGGGTGGGTCGCTCT +
Preference number: 2 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSVTVSW*LWVGRS
Trigger: AGAGCGACCCACCCAGAGCCACCAGGATACAGTAAC...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGCTTTCTGGGAGAAATTaGTTATGGAGAGCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGLSGRN*LWRAVA
Trigger: GGCCACAGCTCTCCATAACCAATTTCTCCCAGAAAG...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp ACCACTCCTGCACAAACTTCTATGAAAGTACCTCACACCACCAGATaGCATCATGGGGCATTGCGCATAGCTGTTTCCTTCAGGTTTAAT +
Preference number: 2 (lower is better)
Translates to: TTPAQTSMKVPHTTR*HHGALRIAVSFRFN
Trigger: ATTAAACCTGAAGGAAACAGCTATGCGCAATGCCCCATGATGCAATCTGGTGGTGTGAGGTACTTTCATAGAAGTTTGTGCAGGAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp ACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTaGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGAACTG +
Preference number: 2 (lower is better)
Translates to: TLRYISCMQQNAGSC*HIQSVSLCLFTGEL
Trigger: CAGTTCCCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTAAGCTACTTTCTTGGTaGTGGAAAGAAAGATTAGCA +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFKLLSW*WKERLA
Trigger: TGCTAATCTTTCTTTCCATCACCAAGAAAGTAGCTT...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCCTCACACCACCAGATTaGATCATGGGGCATTGCGCA +
Preference number: 2 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSLTPPD*IMGHCA
Trigger: TGCGCAATGCCCCATGATGCAATCTGGTGGTGTGAG...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGCAAAGATCTAGCAGTTaGTTACTCCCACAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGQRSSS*LLPQGK
Trigger: CTTGCCTTGTGGGAGTAAGCAACTGCTAGATCTTTG...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCGATGGGGGTGAAGAGTaGATTGGGGTTGAAGATGGG +
Preference number: 2 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSDGGEE*IGVEDG
Trigger: CCCATCTTCAACCCCAATCCACTCTTCACCCCCATC...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTACTCTTCCAATGCTTTTaGGATATGGATCGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILLFQCF*DMDRCG
Trigger: GCCACAGCGATCCATATCCCAAAAGCATTGGAAGAG...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTCTTCATAGAATGAACTaGGTAGTGTTCCTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFLHRMN*VVFLLF
Trigger: AAACAGAAGGAACACTACCCAGTTCATTCTATGAAG...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp CCCATCTCCCCACATTGTACTCTGTCGAATATATTCATCACATATTaGTCCATCATAGTGTCACTTAGGTGTCTTCCACATTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: PISPHCTLSNIFITY*SIIVSLRCLPHWPQ
Trigger: CTGGGGCCAATGTGGAAGACACCTAAGTGACACTATGATGGACAAATATGTGATGAATATATTCGACAGAGTACAATGTGGGGAGATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGTCATTGAAGTTCTGTaGTTACTGCATTGGGTTCCT +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGVIEVL*LLHWVP
Trigger: AGGAACCCAATGCAGTAATCACAGAACTTCAATGAC...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGCAAGGTGTGTTTTGTaGGGCTACAAAAAGATGGAT +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGARCVL*GYKKMD
Trigger: ATCCATCTTTTTGTAGCCTCACAAAACACACCTTGC...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp GTGGCTGCACTGGCTCCTCATTATAGGCCTTTTCTTCAGCATCTTCACGTTGCTACTGTATGCAGTGTATaGGAGAAGAACTGTTCTATT +
Preference number: 2 (lower is better)
Translates to: VAALAPHYRPFLQHLHVATVCSV*EKNCSI
Trigger: AATAGAACAGTTCTTCTCTCATACACTGCATACAGT...AGCAACGTGAAGATGCTGAAGAAAAGGCCTATAATGAGGAGCCAGTGCAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCGTCTGGATATCACCATaGCCCAAGATGGCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSVWISP*PKMAVQ
Trigger: TTGCACTGCCATCTTGGGTCATGGTGATATCCAGAC...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTACAGACATACATGTATaGAAACTGTTGATACACAAC +
Preference number: 2 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFTDIHV*KLLIHN
Trigger: GTTGTGTATCAACAGTTTGCATACATGTATGTCTGT...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp GTGGCTGCACTGGCTCCTCATTATAGGCCTTTTCTTCAGCATCTTCACGTTGCTTGTTTGTATACTTACTaGTGTGCCTGCTGTTGTTAT +
Preference number: 2 (lower is better)
Translates to: VAALAPHYRPFLQHLHVACLYTY*CACCCY
Trigger: ATAACAACAGCAGGCACAGCAGTAAGTATACAAACA...AGCAACGTGAAGATGCTGAAGAAAAGGCCTATAATGAGGAGCCAGTGCAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCTGTGCATGGGGAAAATaGGAAAGGAGGATGTCAGCG +
Preference number: 2 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSCAWGK*ERRMSA
Trigger: CGCTGACATCCTCCTTTCGCATTTTCCCCATGCACA...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTACAAAGATCTAGCAGTTaGTTACTCCCACAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILQRSSS*LLPQGK
Trigger: CTTGCCTTGTGGGAGTAAGCAACTGCTAGATCTTTG...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp CTGGGTGCAGATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTTTTCTTTCACAAACTTaGGTACCTACATTAAGCATG +
Preference number: 2 (lower is better)
Translates to: LGADENLKDPVPSCSLVTFLSQT*VPTLSM
Trigger: CATGCTTAATGTAGGTACCCAAGTTTGTGAAAGAAA...AGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGTCTCCAGATTTATCTaGATGACAGAGAGAGTGGTA +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGVSRFI*MTERVV
Trigger: TACCACTCTCTCTGTCATCCAGATAAATCTGGAGAC...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCAAGGTGTCTTCCACATTaGCCCCAGGCCAGAGGTCCA +
Preference number: 2 (lower is better)
Translates to: FKRFLCFLFKGFYLFICARCLPH*PQARGP
Trigger: TGGACCTCTGGCCTGGGGCCAATGTGGAAGACACCT...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTAGAGCAGAAGGACCCCTaGAACAATGGCCCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLEQKDP*NNGPGK
Trigger: TTTGCCTGGGCCATTGTTCCAGGGGTCCTTCTGCTC...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp GAGTCTTGTTTTTCTGGAGTGTTTGGGTATCCTGGGCTAGCTGTGTaGAGAAAACTGGATTCTGATGATTCCAAGTATCCTTGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: ESCFSGVFGYPGLAV*RKLDSDDSKYPWFL
Trigger: GAGAAACCAAGGATACTTGGAATCATCAGAATCCAGTTTTCTCAACACAGCTAGCCCAGGATACCCAAACACTCCAGAAAAACAAGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp GTGGCTGCACTGGCTCCTCATTATAGGCCTTTTCTTCAGCATCTTCACGTTGCTACAGACATACATGTATaGAAACTGTTGATACACAAC +
Preference number: 2 (lower is better)
Translates to: VAALAPHYRPFLQHLHVATDIHV*KLLIHN
Trigger: GTTGTGTATCAACAGTTTGCATACATGTATGTCTGT...AGCAACGTGAAGATGCTGAAGAAAAGGCCTATAATGAGGAGCCAGTGCAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTACACCATGACCCAAGATaGCAGTGCAAGCCACTGAGA +
Preference number: 2 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLHHDPR*QCKPLR
Trigger: TCTCAGTGGCTTGCACTGCCATCTTGGGTCATGGTG...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TCCGTCTTAAGATCCTCTATCATCAGGAGATGTGCCCTTAAATCAGAGTCTTGTAGTGTTTGGGTATCCTaGGCTAGCTGTGTTGAGAAA +
Preference number: 2 (lower is better)
Translates to: SVLRSSIIRRCALKSESCSVWVS*ASCVEK
Trigger: TTTCTCAACACAGCTAGCCCAGGATACCCAAACACT...ACAAGACTCTGATTTAAGGGCACATCTCCTGATGATAGAGGATCTTAAGACGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTAAGAGTCTTGTTTTTCTaGAGTGTTTGGGTATCCTGG +
Preference number: 2 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILRVLFF*SVWVSW
Trigger: CCAGGATACCCAAACACTCCAGAAAAACAAGACTCT...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp CTTTGCTTTCTTTCTGGCACATGTAAGCATCATTATCATCATCAGAATCAGATCTGCAGGCTCCAGGCATaGATGTGCTACACAGACATA +
Preference number: 2 (lower is better)
Translates to: LCFLSGTCKHHYHHQNQICRLQA*MCYTDI
Trigger: TATGTCTGTGTAGCACATTCATGCCTGGAGCCTGCA...GATCTGATTCTGATGATGATAATGATGCTTACATGTGCCAGAAAGAAAGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGAAGCTACTTTCTTGGTaGTGGAAAGAAAGATTAGCA +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGKLLSW*WKERLA
Trigger: TGCTAATCTTTCTTTCCATCACCAAGAAAGTAGCTT...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGTTGCATCTGGTGTTTTaGTTATTATGTGACCTAAGG +
Preference number: 2 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGLHLVF*LLCDLR
Trigger: CCTTAGGTCACATAATAATCAAAACACCAGATGCAA...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp CTGATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATACTCCTCCCAAACCACTaGTTCTCAGACAATGAAGAG +
Preference number: 2 (lower is better)
Translates to: LIPPKVTYIGFYRLGHIILLPNH*FSDNEE
Trigger: CTCTTCATTGTCTGAGAAGCAGTGGTTTGGGAGGAG...TATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTAACACTTGTGTCTGCTTaGTTCTTGGATCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILTLVSA*FLDPFS
Trigger: AGAAAATGGATCCAAGAAGCAAGCAGACACAAGTGT...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp CCTTCTTTCCACAGAAAGATAAGCAGGACATTTGCTAGAGCAATGCTGGACTCAGAAAACACTTGTGTCTaGTTGCTTCTTGGATCCATT +
Preference number: 2 (lower is better)
Translates to: PSFHRKISRTFARAMLDSENTCV*LLLGSI
Trigger: AATGGATCCAAGAAGCAAGCAGACACAAGTGTTTTC...TGAGTCCAGCATTGCTCTAGCAAATGTCCTGCTTATCTTTCTGTGGAAAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTAGTGGATTGTCCCTCCTaGAAGCATGTATCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLVDCPS*KHVSLS
Trigger: GGAGAGAGATACATGCTTGCAGGAGGGACAATCCAC...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp CTGATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATACTGTGGAGATCAACCTaGGCATTAACAATGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LIPPKVTYIGFYRLGHIILWRST*ALTMSR
Trigger: CCTGCTCATTGTTAATGCCCAGGTTGATCTCCACAG...TATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCATCCAACTACTGGACATaGCCCTCAGCTGCAGCACAA +
Preference number: 2 (lower is better)
Translates to: FKRFLCFLFKGFYLFICASNYWT*PSAAAQ
Trigger: TTGTGCTGCAGCTGAGGGCCATGTCCAGTAGTTGGA...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGGGGAGAAATTGGTTATaGAGAGCTGTGGCCCTGGAT +
Preference number: 2 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWGRNWL*RAVALD
Trigger: ATCCAGGGCCACAGCTCTCCATAACCAATTTCTCCC...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCCATGTATCTCTCTCCTaGGAGACCAATTCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSHVSLS*ETNSFW
Trigger: CCAGAAAGAATTGGTCTCCCAGGAGAGAGATACATG...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCATGCAGGCTCCAGGCATaGATGTGCTACACAGACATA +
Preference number: 2 (lower is better)
Translates to: FKRFLCFLFKGFYLFICACRLQA*MCYTDI
Trigger: TATGTCTGTGTAGCACATTCATGCCTGGAGCCTGCA...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCGTCTCCAATGGTAGATaGGCATTTTCTCTCACATCA +
Preference number: 2 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSVSNGR*AFSLTS
Trigger: TGATGTGAGAGAAAATGCTCATCTACCATTGGAGAC...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTATGGGAGCAATTTCTTTaGGTGTTGTGTCAATGTTTT +
Preference number: 2 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILWEQFL*VLCQCF
Trigger: AAAACATTGACACAACACTCAAAGAAATTGCTCCCA...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTAAAGTTCTGTGATTACTaGATTGGGTTCCTATTGACT +
Preference number: 2 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILKFCDY*IGFLLT
Trigger: AGTCAATAGGAACCCAATGCAGTAATCACAGAACTT...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TCCGTCTTAAGATCCTCTATCATCAGGAGATGTGCCCTTAAATCAGAGTCTTGTGTATACTTACTGCTGTaGCTGCTGTTGTTATTGCTA +
Preference number: 2 (lower is better)
Translates to: SVLRSSIIRRCALKSESCVYLLL*LLLLLL
Trigger: TAGCAATAACAACAGCAGGCACAGCAGTAAGTATAC...ACAAGACTCTGATTTAAGGGCACATCTCCTGATGATAGAGGATCTTAAGACGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp CCTTCTTTCCACAGAAAGATAAGCAGGACATTTGCTAGAGCAATGCTGGACTCATGTTTGTATACTTACTaGTGTGCCTGCTGTTGTTAT +
Preference number: 2 (lower is better)
Translates to: PSFHRKISRTFARAMLDSCLYTY*CACCCY
Trigger: ATAACAACAGCAGGCACAGCAGTAAGTATACAAACA...TGAGTCCAGCATTGCTCTAGCAAATGTCCTGCTTATCTTTCTGTGGAAAGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp GTTAGTCTCTGTCTCTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAGTTGGATGGTGCTGTaGAGATCAACCTGGGCATTA +
Preference number: 2 (lower is better)
Translates to: VSLCLFTGELGLLMLKDISWMVL*RSTWAL
Trigger: TAATGCCCAGGTTGATCTCCACAGCACCATCCAACT...AATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGAGACAGAGACTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCACACCAGATTGCATCATaGGGCATTGCGCATAGCTGT +
Preference number: 2 (lower is better)
Translates to: FKRFLCFLFKGFYLFICAHQIAS*GIAHSC
Trigger: ACAGCTATGCGCAATGCCCCATGATGCAATCTGGTG...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGAAAGATTCCAACTACTaGACATGGCCCTCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWKDSNY*TWPSAA
Trigger: TGCAGCTGAGGGCCATGTCCAGTAGTTGGAATCTTT...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp TTGTGTCCTGGATTTCCTGAATATTGTTGGTTGGGAGCAATTTCTTaGAGTGTTGTGTCAATGTTTTCTAGGATATCCTCTGAACCTGAG +
Preference number: 2 (lower is better)
Translates to: LCPGFPEYCWLGAIS*SVVSMFSRISSEPE
Trigger: CTCAGGTTCAGAGGATATCCTAGAAAACATTGACACAACACTCAAAGAAATTGCTCCCAACCAACAATATTCAGGAAATCCAGGACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp ATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATTTCTGCTTCTCAGACAATaGAGAGTCCTACGTAGCAGT +
Preference number: 2 (lower is better)
Translates to: IPPKVTYIGFYRLGHIIFLLLRQ*RVLRSS
Trigger: ACTGCTACGTAGGACTCTTCATTGTCTGAGAAGCAG...AAATATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCACTGCTTCTCAGACAATaGAGAGTCCTACGTAGCAGT +
Preference number: 2 (lower is better)
Translates to: FKRFLCFLFKGFYLFICALLLRQ*RVLRSS
Trigger: ACTGCTACGTAGGACTCTTCATTGTCTGAGAAGCAG...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp ATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATTTCCTCTGCCTCTCAAGTaGTGGAATAGACTGGTAAAC +
Preference number: 2 (lower is better)
Translates to: IPPKVTYIGFYRLGHIIFPLPLK*WNRLVN
Trigger: GTTTACCAGTCTATTCCAGCACTTGAGAGGCAGAGG...AAATATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGTTCCTCTCTCAACAGTaGACAAACTGTTCTCTTCCG +
Preference number: 2 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWFLSQQ*TNCSLP
Trigger: CGGAAGAGAACAGTTTGTGCACTGTTGAGAGAGGAA...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTTTCTCCTCCTGTCATTaGCCTAGCATCTCCAGATCT +
Preference number: 2 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLFSSCH*PSISRS
Trigger: AGATCTGGAGATGCTAGGGCAATGACAGGAGGAGAA...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCATTCTCCTCCTGTCATTaGCCTAGCATCTCCAGATCT +
Preference number: 2 (lower is better)
Translates to: FKRFLCFLFKGFYLFICAFSSCH*PSISRS
Trigger: AGATCTGGAGATGCTAGGGCAATGACAGGAGGAGAA...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCTCAATTCTCTTCCAATaGTTTTGGGATATGGATCGC +
Preference number: 2 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSSILFQ*FWDMDR
Trigger: GCGATCCATATCCCAAAAGCATTGGAAGAGAATTGA...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGGCAAGGTGTGTTTTGTaGGGCTACAAAAAGATGGAT +
Preference number: 2 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWARCVL*GYKKMD
Trigger: ATCCATCTTTTTGTAGCCTCACAAAACACACCTTGC...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCAAGAGTGGATTGGGGTTaGAGATGGGTCTATAAAGCA +
Preference number: 2 (lower is better)
Translates to: FKRFLCFLFKGFYLFICARVDWG*RWVYKA
Trigger: TGCTTTATAGACCCATCTTCAACCCCAATCCACTCT...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp CTGATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATAACTTACTGCTGTGCCTaGTGTTGTTATTGCTATCTA +
Preference number: 2 (lower is better)
Translates to: LIPPKVTYIGFYRLGHIITYCCA*CCYCYL
Trigger: TAGATAGCAATAACAACAGCAGGCACAGCAGTAAGT...TATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCATTCCTCTCTCAACAGTaGACAAACTGTTCTCTTCCG +
Preference number: 2 (lower is better)
Translates to: FKRFLCFLFKGFYLFICAFLSQQ*TNCSLP
Trigger: CGGAAGAGAACAGTTTGTGCACTGTTGAGAGAGGAA...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGCCAACAACCCAACAATaGTCAGTAATGGCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWPTTQQ*SVMAVN
Trigger: ATTCACAGCCATTACTGACCATTGTTGGGTTGTTGG...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp GTTAGTCTCTGTCTCTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTGTATGTCTGCATTTCTaGGAGGTCAATTCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: VSLCLFTGELGLLMLKDIVCLHF*EVNSLP
Trigger: TGGAAGAGAATTGACCTCCCAGAAATGCAGACATAC...AATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGAGACAGAGACTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTAGTGTTTGGGTATCCTaGGCTAGCTGTGTTGAGAAA +
Preference number: 2 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLSVWVS*ASCVEK
Trigger: TTTCTCAACACAGCTAGCCCAGGATACCCAAACACT...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGAGAGTCTTGTTTTTCTaGAGTGTTTGGGTATCCTGG +
Preference number: 2 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWRVLFF*SVWVSW
Trigger: CCAGGATACCCAAACACTCCAGAAAAACAAGACTCT...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp TTTTCCAGGTTCCATGTGTTTGTATACTTACTGCTGTGCCTGCTGTaGTTATTGCTATCTAGCTTTAATCCAATGCTCCTAAAAATCTGT +
Preference number: 2 (lower is better)
Translates to: FSRFHVFVYLLLCLL*LLLSSFNPMLLKIC
Trigger: ACAGATTTTTAGGAGCATTGGATTAAAGCTAGATAGCAATAACAACAGCAGGCACAGCAGTAAGTATACAAACACATGGAACCTGGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 90 bp CTTCACTCTCTTCTATACCTATTATACTTAGATTTGGTCTTCCCATaGTGTCCTGGATTTCCTGAATATTGTTGGTTGGGAGCAATTTCT +
Preference number: 2 (lower is better)
Translates to: LHSLLYLLYLDLVFP*CPGFPEYCWLGAIS
Trigger: AGAAATTGCTCCCAACCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAATAGGTATAGAAGAGAGTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp GTTAGTCTCTGTCTCTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTGAAAACACTTGTGTCTaGTTGCTTCTTGGATCCATT +
Preference number: 2 (lower is better)
Translates to: VSLCLFTGELGLLMLKDIENTCV*LLLGSI
Trigger: AATGGATCCAAGAAGCAAGCAGACACAAGTGTTTTC...AATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGAGACAGAGACTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGGTATACTTACTGCTGTaGCTGCTGTTGTTATTGCTA +
Preference number: 2 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWVYLLL*LLLLLL
Trigger: TAGCAATAACAACAGCAGGCACAGCAGTAAGTATAC...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTGGTACAGACAAGCCTTaGTCTACTTCAGTCAGTTAT +
Preference number: 2 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLGTDKP*STSVSY
Trigger: ATAACTGACTGAAGTAGACCAAGGCTTGTCTGTACC...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCAGGTACAGACAAGCCTTaGTCTACTTCAGTCAGTTAT +
Preference number: 2 (lower is better)
Translates to: FKRFLCFLFKGFYLFICAGTDKP*STSVSY
Trigger: ATAACTGACTGAAGTAGACCAAGGCTTGTCTGTACC...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTTATGCAGCAAAATGCTaGGTCCTGTTTGCATATCCA +
Preference number: 2 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLYAAKC*VLFAYP
Trigger: TGGATATGCAAACAGGACCCAGCATTTTGCTGCATA...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp CTTTGCTTTCTTTCTGGCACATGTAAGCATCATTATCATCATCAGAATCAGATCCATATTTCAGGTCATTaGAGTTCTGTGATTACTGCA +
Preference number: 2 (lower is better)
Translates to: LCFLSGTCKHHYHHQNQIHISGH*SSVITA
Trigger: TGCAGTAATCACAGAACTTCAATGACCTGAAATATG...GATCTGATTCTGATGATGATAATGATGCTTACATGTGCCAGAAAGAAAGCAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp GTTAGTCTCTGTCTCTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTCATATTTCAGGTCATTaGAGTTCTGTGATTACTGCA +
Preference number: 2 (lower is better)
Translates to: VSLCLFTGELGLLMLKDIHISGH*SSVITA
Trigger: TGCAGTAATCACAGAACTTCAATGACCTGAAATATG...AATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGAGACAGAGACTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp GTTAGTCTCTGTCTCTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTTTGCATCTGGTGTTTTaGTTATTATGTGACCTAAGG +
Preference number: 2 (lower is better)
Translates to: VSLCLFTGELGLLMLKDILHLVF*LLCDLR
Trigger: CCTTAGGTCACATAATAATCAAAACACCAGATGCAA...AATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGAGACAGAGACTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp CTGATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATTGGATATAGTTGTCTaGATTGAAAGCTGTGTTCTT +
Preference number: 2 (lower is better)
Translates to: LIPPKVTYIGFYRLGHIILDIVV*IESCVL
Trigger: AAGAACACAGCTTTCAATCCAGACAACTATATCCAA...TATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR TCA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTACTGTATGCAGTGTATaGGAGAAGAACTGTTCTATT +
Preference number: 2 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLTVCSV*EKNCSI
Trigger: AATAGAACAGTTCTTCTCTCATACACTGCATACAGT...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTAAGTTCTGTGATTACTaGATTGGGTTCCTATTGACT +
Preference number: 2 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLKFCDY*IGFLLT
Trigger: AGTCAATAGGAACCCAATGCAGTAATCACAGAACTT...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR GCA 90 bp ATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATTTGCCTGCTGTTGTTATTaGTATCTAGCTTTAATCCAA +
Preference number: 2 (lower is better)
Translates to: IPPKVTYIGFYRLGHIIFACCCY*YLALIQ
Trigger: TTGGATTAAAGCTAGATAGCAATAACAACAGCAGGC...AAATATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CCA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGTTTCTTTCACAAACTTaGGTACCTACATTAAGCATG +
Preference number: 2 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWFLSQT*VPTLSM
Trigger: CATGCTTAATGTAGGTACCCAAGTTTGTGAAAGAAA...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp CCTGTCCCCAGCTGTTCCTTGGTTACTGTATCCTGGTaGCTCTGGGTGGGTCGCTCTTGGGCCAAGAATTTG +
Preference number: 3 (lower is better)
Translates to: PVPSCSLVTVSW*LWVGRSWAKNL
Trigger: CAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAGTAACCAAGGAACAGCTGGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp GATCCTGTCCCCAGCTGTTCCTTGGTTACTGTATCCTaGTGGCTCTGGGTGGGTCGCTCTTGGGCCAAGAAT +
Preference number: 3 (lower is better)
Translates to: DPVPSCSLVTVS*WLWVGRSWAKN
Trigger: ATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAGTAACCAAGGAACAGCTGGGGACAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp CCCAGCTGTTCCTTGGTTACTGTATCCTGGTGGCTCTaGGTGGGTCGCTCTTGGGCCAAGAATTTGAGCAGA +
Preference number: 3 (lower is better)
Translates to: PSCSLVTVSWWL*VGRSWAKNLSR
Trigger: TCTGCTCAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAGTAACCAAGGAACAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp GGAGAGCTGTGGCCCTGGATTAGTTCTGGGTGCAGATaGAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTT +
Preference number: 3 (lower is better)
Translates to: GELWPWISSGCR*KPEGSCPQLFL
Trigger: AAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAGAACTAATCCAGGGCCACAGCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp GAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATaGCCCCAAAGACCTTTGGACCATGGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: ESYVAVHWTQDT*PQRPLDHGVCV
Trigger: CACACACACACCATGGTCCAAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp AGGCAGCCTGGGTCTGGATATCACCATGACCCAAGATaGCAGTGCAAGCCACTGAGAGCAGTTTATCAGGGA +
Preference number: 3 (lower is better)
Translates to: RQPGSGYHHDPR*QCKPLRAVYQG
Trigger: TCCCTGATAAACTGCTCTCAGTGGCTTGCACTGCCATCTTGGGTCATGGTGATATCCAGACCCAGGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp GTGGCTGCACTGGCTCCTCATTATAGGCCTTTTCTTCAGCATCTTCACGTTGCTCCTCACACCACCAGATaGCATCATGGGGCATTGCGC +
Preference number: 3 (lower is better)
Translates to: VAALAPHYRPFLQHLHVAPHTTR*HHGALR
Trigger: GCGCAATGCCCCATGATGCAATCTGGTGGTGTGAGG...AGCAACGTGAAGATGCTGAAGAAAAGGCCTATAATGAGGAGCCAGTGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp GGTGGCTCTGGGTGGGTCGCTCTTGGGCCAAGAATTTaGGCAGAAGTAGTGTTCTTACCTGTGCTCACAAGT +
Preference number: 3 (lower is better)
Translates to: GGSGWVALGPRI*AEVVFLPVLTS
Trigger: ACTTGTGAGCACAGGTAAGAACACTACTTCTGCTCAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp CCTGGGTCTGGATATCACCATGACCCAAGATGGCAGTaGAAGCCACTGAGAGCAGTTTATCAGGGAGCAGAA +
Preference number: 3 (lower is better)
Translates to: PGSGYHHDPRWQ*KPLRAVYQGAE
Trigger: TTCTGCTCCCTGATAAACTGCTCTCAGTGGCTTGCACTGCCATCTTGGGTCATGGTGATATCCAGACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp CTGGGAGGTCAATTCTCTTCCAATGCTTTTGGGATATaGATCGCTGTGGCACAGGATCAGCTCCTGGTGGCT +
Preference number: 3 (lower is better)
Translates to: LGGQFSSNAFGI*IAVAQDQLLVA
Trigger: AGCCACCAGGAGCTGATCCTGTGCCACAGCGATCCATATCCCAAAAGCATTGGAAGAGAATTGACCTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTAAAGTCACAGTCCTCTaGCCTCTGCCTCTCAAGTGC +
Preference number: 3 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFKVTVL*PLPLKC
Trigger: GCACTTGAGAGGCAGAGGCAAGAGGACTGTGACTTT...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTGGGGTGAAGAGTGGATaGGGGTTGAAGATGGGTCTA +
Preference number: 3 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFGVKSG*GLKMGL
Trigger: TAGACCCATCTTCAACCCCAATCCACTCTTCACCCC...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp GTGGCTGCACTGGCTCCTCATTATAGGCCTTTTCTTCAGCATCTTCACGTTGCTAAAGTCACAGTCCTCTaGCCTCTGCCTCTCAAGTGC +
Preference number: 3 (lower is better)
Translates to: VAALAPHYRPFLQHLHVAKVTVL*PLPLKC
Trigger: GCACTTGAGAGGCAGAGGCAAGAGGACTGTGACTTT...AGCAACGTGAAGATGCTGAAGAAAAGGCCTATAATGAGGAGCCAGTGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp TACGTAGCAGTGCACTGGATCCACTATCACCAGTGCTaGTCTTTTAATCCAGGCCAGAAAGGGAGAGGACAC +
Preference number: 3 (lower is better)
Translates to: YVAVHWIHYHQC*SFNPGQKGRGH
Trigger: GTGTCCTCTCCCTTTCTGGCCTGGATTAAAAGAGCAGCACTGGTGATAGTGGATCCAGTGCACTGCTACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp TCCTACGTAGCAGTGCACTGGATCCACTATCACCAGTaGTGCTCTTTTAATCCAGGCCAGAAAGGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: SYVAVHWIHYHQ*CSFNPGQKGRG
Trigger: TCCTCTCCCTTTCTGGCCTGGATTAAAAGAGCAGCACTGGTGATAGTGGATCCAGTGCACTGCTACGTAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp CCTAGCATCTCCAGATCTGCCTCACTTATACCACTCTaGTCGGCAGTCTCTCCTGCCTCTCTATCTCACATT +
Preference number: 3 (lower is better)
Translates to: PSISRSASLIPL*SAVSPASLSHI
Trigger: AATGTGAGATAGAGAGGCAGGAGAGACTGCCGAGCAGAGTGGTATAAGTGAGGCAGATCTGGAGATGCTAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp CCAACACCTTTGGATGTGACCTGTTCCTTTATCACCTaGGGCCTTTTCTCCTCCTGTCATTGCCCTAGCATC +
Preference number: 3 (lower is better)
Translates to: PTPLDVTCSFIT*GLFSSCHCPSI
Trigger: GATGCTAGGGCAATGACAGGAGGAGAAAAGGCCGCAGGTGATAAAGGAACAGGTCACATCCAAAGGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp GTTACTGTATCCTGGTGGCTCTGGGTGGGTCGCTCTTaGGCCAAGAATTTGAGCAGAAGTAGTGTTCTTACC +
Preference number: 3 (lower is better)
Translates to: VTVSWWLWVGRS*AKNLSRSSVLT
Trigger: GGTAAGAACACTACTTCTGCTCAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCAGGATACAGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp AGAGGAGACTCCAACTCACAACCTAGCCACCACTCCTaGACAAACTTCTATGAAAGTACCTCACACCACCAG +
Preference number: 3 (lower is better)
Translates to: RGDSNSQPSHHS*TNFYESTSHHQ
Trigger: CTGGTGGTGTGAGGTACTTTCATAGAAGTTTGTGCAGGAGTGGTGGCTAGGTTGTGAGTTGGAGTCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp TCCTTTATCACCTGCGGCCTTTTCTCCTCCTGTCATTaGCCTAGCATCTCCAGATCTGCCTCACTTATACCA +
Preference number: 3 (lower is better)
Translates to: SFITCGLFSSCH*PSISRSASLIP
Trigger: TGGTATAAGTGAGGCAGATCTGGAGATGCTAGGGCAATGACAGGAGGAGAAAAGGCCGCAGGTGATAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp TCAACAACTCCTCCCAAACCACTGCTTCTCAGACAATaGAGAGTCCTACGTAGCAGTGCACTGGATCCACTA +
Preference number: 3 (lower is better)
Translates to: STTPPKPLLLRQ*RVLRSSALDPL
Trigger: TAGTGGATCCAGTGCACTGCTACGTAGGACTCTTCATTGTCTGAGAAGCAGTGGTTTGGGAGGAGTTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp AAGCATGTATCTCTCTCCTGGGAGACCAATTCTTTCTaGGAGAAATTGGTTATGGAGAGCTGTGGCCCTGGA +
Preference number: 3 (lower is better)
Translates to: KHVSLSWETNSF*EKLVMESCGPG
Trigger: TCCAGGGCCACAGCTCTCCATAACCAATTTCTCCCAGAAAGAATTGGTCTCCCAGGAGAGAGATACATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTAGGGGTGAAGAGTGGATaGGGGTTGAAGATGGGTCTA +
Preference number: 3 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILGVKSG*GLKMGL
Trigger: TAGACCCATCTTCAACCCCAATCCACTCTTCACCCC...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp TTCAAAGTCACAGTCCTCTTGCCTCTGCCTCTCAAGTaGTGGAATAGACTGGTAAACAGTCTTGCTCATCCA +
Preference number: 3 (lower is better)
Translates to: FKVTVLLPLPLK*WNRLVNSLAHP
Trigger: TGGATGAGCAAGACTGTTTACCAGTCTATTCCAGCACTTGAGAGGCAGAGGCAAGAGGACTGTGACTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp GTGGATTGTCCCTCCTGCAAGCATGTATCTCTCTCCTaGGAGACCAATTCTTTCTGGGAGAAATTGGTTATG +
Preference number: 3 (lower is better)
Translates to: VDCPSCKHVSLS*ETNSFWEKLVM
Trigger: CATAACCAATTTCTCCCAGAAAGAATTGGTCTCCCAGGAGAGAGATACATGCTTGCAGGAGGGACAATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTACCAGGTTCCATGTGTTaGTATACTTACTGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILPGSMC*YTYCCA
Trigger: GGCACAGCAGTAAGTATACAAACACATGGAACCTGG...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp AGCAATGCTGGACTCATGGGGAAGAGTAACCTCAACTaGGAAAATGCATTCCTGAGAGTGTCCTATAGGCAA +
Preference number: 3 (lower is better)
Translates to: SNAGLMGKSNLN*ENAFLRVSYRQ
Trigger: TTGCCTATAGGACACTCTCAGGAATGCATTTTCTCAGTTGAGGTTACTCTTCCCCATGAGTCCAGCATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGAACACTTGTGTCTGCTaGCTTCTTGGATCCATTTTC +
Preference number: 3 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGNTCVC*LLGSIF
Trigger: GAAAATGGATCCAAGAAGCAAGCAGACACAAGTGTT...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp CCTTCTTTCCACAGAAAGATAAGCAGGACATTTGCTAGAGCAATGCTGGACTCACTGCTGTGCCTGCTGTaGTTATTGCTATCTAGCTTT +
Preference number: 3 (lower is better)
Translates to: PSFHRKISRTFARAMLDSLLCLL*LLLSSF
Trigger: AAAGCTAGATAGCAATAACAACAGCAGGCACAGCAG...TGAGTCCAGCATTGCTCTAGCAAATGTCCTGCTTATCTTTCTGTGGAAAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGGTCCCCAGCTGTTCCTaGGTTACTGTATCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWVPSCS*VTVSWW
Trigger: CCACCAGGATACAGTAACCAAGGAACAGCTGGGGAC...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp AATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGACATCCTGGATGCTTTaGTTCAATTCCTTCACCTGT +
Preference number: 3 (lower is better)
Translates to: NAGSCLHIQSVSLCLFTGTSWML*FNSFTC
Trigger: ACAGGTGAAGGAATTGAACAAAAGCATCCAGGATGT...CCCAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp CAATTCATTGAATGTGTAAAGCATGCTTCTATAGTATaGCCCACGTGTTCCCCAGCAACAATGTGCATGGGG +
Preference number: 3 (lower is better)
Translates to: QFIECVKHASIV*PTCSPATMCMG
Trigger: CCCCATGCACATTGTTGCTGGGGAACACGTGGGTCATACTATAGAAGCATGCTTTACACATTCAATGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp AGACCATGGCATCAAAAAGATTCCAACTACTGGACATaGCCCTCAGCTGCAGCACAAACAGAAAAATCATCA +
Preference number: 3 (lower is better)
Translates to: RPWHQKDSNYWT*PSAAAQTEKSS
Trigger: TGATGATTTTTCTGTTTGTGCTGCAGCTGAGGGCCATGTCCAGTAGTTGGAATCTTTTTGATGCCATGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTAGTGTCTGCTTGCTTCTaGGATCCATTTTCTTCTAAC +
Preference number: 3 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILVSACF*DPFSSN
Trigger: GTTAGAAGAAAATGGATCCAAGAAGCAAGCAGACAC...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp CCCACACACTTATTCTCTGCAGTCTCTGATAGTATCTaGGCATTTCCTCTCACATCAATGGGACCTTTAATC +
Preference number: 3 (lower is better)
Translates to: PTHLFSAVSDSI*AFPLTSMGPLI
Trigger: GATTAAAGGTCCCATTGATGTGAGAGGAAATGCTCAGATACTATCAGAGACTGCAGAGAATAAGTGTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp ACATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTTaGATATCCAGTCTGTTAGTCTCTGTCTCTTTACTG +
Preference number: 3 (lower is better)
Translates to: TFPVCSKMLGPV*ISSLLVSVSLL
Trigger: CAGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATTTTGCTGCATACAGGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp CATGAACCACTGTGGTCTTTGAAAGACCACCACTGTTaGCTTTCTCGTTTTGAGTCACCTTTCTTTTCACTT +
Preference number: 3 (lower is better)
Translates to: HEPLWSLKDHHC*LSRFESPFFSL
Trigger: AAGTGAAAAGAAAGGTGACTCAAAACGAGAAAGGCAACAGTGGTGGTCTTTCAAAGACCACAGTGGTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp ATCAGATCCTTTTGCAGCTCTTTGATGATAAAGAGTTaGATGGTGCTGTGGAGATCAACCTGGGCATTAACA +
Preference number: 3 (lower is better)
Translates to: IRSFCSSLMIKS*MVLWRSTWALT
Trigger: TGTTAATGCCCAGGTTGATCTCCACAGCACCATCCAACTCTTTATCATCAAAGAGCTGCAAAAGGATCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TCCGTCTTAAGATCCTCTATCATCAGGAGATGTGCCCTTAAATCAGAGTCTTGTCACTCAGTAAAAGGCTaGAGTCACCAGAAAGATTGT +
Preference number: 3 (lower is better)
Translates to: SVLRSSIIRRCALKSESCHSVKG*SHQKDC
Trigger: ACAATCTTTCTGGTGACTCAAGCCTTTTACTGAGTG...ACAAGACTCTGATTTAAGGGCACATCTCCTGATGATAGAGGATCTTAAGACGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp CCTTCTTTCCACAGAAAGATAAGCAGGACATTTGCTAGAGCAATGCTGGACTCATCCTTTTGCAGCTCTTaGATGATAAAGAGTTGGATG +
Preference number: 3 (lower is better)
Translates to: PSFHRKISRTFARAMLDSSFCSS*MIKSWM
Trigger: CATCCAACTCTTTATCATCAAAGAGCTGCAAAAGGA...TGAGTCCAGCATTGCTCTAGCAAATGTCCTGCTTATCTTTCTGTGGAAAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTAACCTTTATATGTTACTaGACCTTTCTCCCTTTCTGC +
Preference number: 3 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILTFICY*TFLPFC
Trigger: GCAGAAAGGGAGAAAGGTCAAGTAACATATAAAGGT...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp ATCTGCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTaGGAAGTCTGGTGTAATTCTAATATGCCTACCTTT +
Preference number: 3 (lower is better)
Translates to: ICPGSSSFHSLW*EVWCNSNMPTF
Trigger: AAAGGTAGGCATATTAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp CCAGGTTCCATGTGTTTGTATACTTACTGCTGTGCCTaGTGTTGTTATTGCTATCTAGCTTTAATCCAATGC +
Preference number: 3 (lower is better)
Translates to: PGSMCLYTYCCA*CCYCYLALIQC
Trigger: GCATTGGATTAAAGCTAGATAGCAATAACAACAGCAGGCACAGCAGTAAGTATACAAACACATGGAACCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp AGAAGTAGTGTTCTTACCTGTGCTCACAAGTATGTCTaGATTTCTGGGAGGTCAATTCTCTTCCAATGCTTT +
Preference number: 3 (lower is better)
Translates to: RSSVLTCAHKYV*ISGRSILFQCF
Trigger: AAAGCATTGGAAGAGAATTGACCTCCCAGAAATGCAGACATACTTGTGAGCACAGGTAAGAACACTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp ATTCCAAGTATCCTTGGTTTCTCTTTCTTTCGTTCTTaGCCTTGCCTCTCACCATCTAGTTATTTCTGGTGT +
Preference number: 3 (lower is better)
Translates to: IPSILGFSFFRS*PCLSPSSYFWC
Trigger: ACACCAGAAATAACTAGATGGTGAGAGGCAAGGGCAAGAACGAAAGAAAGAGAAACCAAGGATACTTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp ACAGAAAATGAGTTACTAAATGTCTCTCAGAGACCATaGCATCAAAAAGATTCCAACTACTGGACATGGCCC +
Preference number: 3 (lower is better)
Translates to: TENELLNVSQRP*HQKDSNYWTWP
Trigger: GGGCCATGTCCAGTAGTTGGAATCTTTTTGATGCCATGGTCTCTGAGAGACATTTAGTAACTCATTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp GTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTaGTTGGGAGCAATTTCTTTGAGTGTTGTGTCAATG +
Preference number: 3 (lower is better)
Translates to: VFPLCPGFPEYC*LGAISLSVVSM
Trigger: CATTGACACAACACTCAAAGAAATTGCTCCCAACCAACAATATTCAGGAAATCCAGGACACAATGGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CCA 72 bp TTGAGGCCTGTTTTATGGCTGATTATATGGTCCTTTTaGAGAAGGTACCATGAGGTGTTGAGTAGAAGGTAT +
Preference number: 3 (lower is better)
Translates to: LRPVLWLIIWSF*RRYHEVLSRRY
Trigger: ATACCTTCTACTCAACACCTCATGGTACCTTCTCCAAAAGGACCATATAATCAGCCATAAAACAGGCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp GCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTATCAGTTTTCCTGTATTaGTCCAGAGTCATAGAGATT +
Preference number: 3 (lower is better)
Translates to: AQDLLAFIVSGEKSGVILSVFLY*SRVIEI
Trigger: AATCTCTATGACTCTGGACAAATACAGGAAAACTGA...TAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGAAGATCCTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCGTTTTGCTCCTAGCATaGCTTTCATTGTGTCCCATA +
Preference number: 3 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSVLLLA*LSLCPI
Trigger: TATGGGACACAATGAAAGCAATGCTAGGAGCAAAAC...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TCCGTCTTAAGATCCTCTATCATCAGGAGATGTGCCCTTAAATCAGAGTCTTGTACATATTTCAGGTCATaGAAGTTCTGTGATTACTGC +
Preference number: 3 (lower is better)
Translates to: SVLRSSIIRRCALKSESCTYFRS*KFCDYC
Trigger: GCAGTAATCACAGAACTTCAATGACCTGAAATATGT...ACAAGACTCTGATTTAAGGGCACATCTCCTGATGATAGAGGATCTTAAGACGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TCCGTCTTAAGATCCTCTATCATCAGGAGATGTGCCCTTAAATCAGAGTCTTGTGTGTTCTTTCAAAACTaGCATAGCACTAATCTGAGT +
Preference number: 3 (lower is better)
Translates to: SVLRSSIIRRCALKSESCVFFQN*HSTNLS
Trigger: ACTCAGATTAGTGCTATGCAAGTTTTGAAAGAACAC...ACAAGACTCTGATTTAAGGGCACATCTCCTGATGATAGAGGATCTTAAGACGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCTGCCTGCTGTTGTTATaGCTATCTAGCTTTAATCCA +
Preference number: 3 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSCLLLL*LSSFNP
Trigger: TGGATTAAAGCTAGATAGCAATAACAACAGCAGGCA...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp ATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATTTCCAGGTTCCATGTGTTaGTATACTTACTGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: IPPKVTYIGFYRLGHIIFPGSMC*YTYCCA
Trigger: GGCACAGCAGTAAGTATACAAACACATGGAACCTGG...AAATATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTAATTTCCCCAACACCTTaGGATGTGACCTGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLISPTP*DVTCSF
Trigger: AAAGGAACAGGTCACATCCAAAGGTGTTGGGGAAAT...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGATTTCCCCAACACCTTaGGATGTGACCTGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWISPTP*DVTCSF
Trigger: AAAGGAACAGGTCACATCCAAAGGTGTTGGGGAAAT...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCCCTGAATATTGTTGGTaGGGAGCAATTTCTTTGAGT +
Preference number: 3 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSPEYCW*GAISLS
Trigger: ACTCAAAGAAATTGCTCCCAACCAACAATATTCAGG...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTAGATTTGGTCTTCCCATaGTGTCCTGGATTTCCTGAA +
Preference number: 3 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLDLVFP*CPGFPE
Trigger: TTCAGGAAATCCAGGACACAATGGGAAGACCAAATC...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp CTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTaGATATTGTTGGTTGGGAGCAATTTCTTTGAGTGT +
Preference number: 3 (lower is better)
Translates to: LRFGLPIVSWIS*ILLVGSNFFEC
Trigger: ACACTCAAAGAAATTGCTCCCAACCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR GCA 72 bp CAGGAAGTGCAAGGGATAAATTTCTTCTTCAAAGGATaGTATGTCAGTTTGATAATCCAGAGGAGACTCCAA +
Preference number: 3 (lower is better)
Translates to: QEVQGINFFFKG*YVSLIIQRRLQ
Trigger: TTGGAGTCTCCTCTGGATTATCAAACTGACATAGCATCCTTTGAAGAAGAAATTTATCCCTTGCACTTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTACACTCAGTAAAAGGCTaGAGTCACCAGAAAGATTGT +
Preference number: 3 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLHSVKG*SHQKDC
Trigger: ACAATCTTTCTGGTGACTCAAGCCTTTTACTGAGTG...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTAAACACTTGTGTCTGCTaGCTTCTTGGATCCATTTTC +
Preference number: 3 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLNTCVC*LLGSIF
Trigger: GAAAATGGATCCAAGAAGCAAGCAGACACAAGTGTT...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp ATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATTTCTGCTGTGCCTGCTGTaGTTATTGCTATCTAGCTTT +
Preference number: 3 (lower is better)
Translates to: IPPKVTYIGFYRLGHIIFLLCLL*LLLSSF
Trigger: AAAGCTAGATAGCAATAACAACAGCAGGCACAGCAG...AAATATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCAGGATGCTATGTCAGTTaGATAATCCAGAGGAGACTC +
Preference number: 3 (lower is better)
Translates to: FKRFLCFLFKGFYLFICAGCYVS*IIQRRL
Trigger: GAGTCTCCTCTGGATTATCAAACTGACATAGCATCC...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTTTCAGCATCTTCACGTaGCTAGTTCTTCCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLFSIFT*LVLPLS
Trigger: TGAGAGAGGAAGAACTAGCAACGTGAAGATGCTGAA...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGTCTTGGGCCAAGAATTaGAGCAGAAGTAGTGTTCTT +
Preference number: 3 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWSWAKN*SRSSVL
Trigger: AAGAACACTACTTCTGCTCAAATTCTTGGCCCAAGA...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTTTTGATGATAAAGAGTaGGATGGTGCTGTGGAGATC +
Preference number: 3 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLFDDKE*DGAVEI
Trigger: GATCTCCACAGCACCATCCAACTCTTTATCATCAAA...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp CTGATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATACAGAATCAGATCCTTTaGCAGCTCTTTGATGATAAA +
Preference number: 3 (lower is better)
Translates to: LIPPKVTYIGFYRLGHIIQNQIL*QLFDDK
Trigger: TTTATCATCAAAGAGCTGCAAAAGGATCTGATTCTG...TATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTGTGTCTGCTTGCTTCTaGGATCCATTTTCTTCTAAC +
Preference number: 3 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLVSACF*DPFSSN
Trigger: GTTAGAAGAAAATGGATCCAAGAAGCAAGCAGACAC...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGTTTCTATCTCCAGAGTaGTCTCCCTTTGTGATTTCT +
Preference number: 3 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWFLSPE*SPFVIS
Trigger: AGAAATCACAAAGGGAGACAACTCTGGAGATAGAAA...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTAACATATTTCAGGTCATaGAAGTTCTGTGATTACTGC +
Preference number: 3 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLTYFRS*KFCDYC
Trigger: GCAGTAATCACAGAACTTCAATGACCTGAAATATGT...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCATCCTTTTGCAGCTCTTaGATGATAAAGAGTTGGATG +
Preference number: 3 (lower is better)
Translates to: FKRFLCFLFKGFYLFICASFCSS*MIKSWM
Trigger: CATCCAACTCTTTATCATCAAAGAGCTGCAAAAGGA...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGCGTTTATGGCTTTATTaGTCTCCAGATTTATCTGGA +
Preference number: 3 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWRLWLY*SPDLSG
Trigger: TCCAGATAAATCTGGAGACAAATAAAGCCATAAACG...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp ATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATTTCAGAATCAGATCCTTTaGCAGCTCTTTGATGATAAA +
Preference number: 3 (lower is better)
Translates to: IPPKVTYIGFYRLGHIIFQNQIL*QLFDDK
Trigger: TTTATCATCAAAGAGCTGCAAAAGGATCTGATTCTG...AAATATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp ATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATTTGTGTTCTTTCAAAACTaGCATAGCACTAATCTGAGT +
Preference number: 3 (lower is better)
Translates to: IPPKVTYIGFYRLGHIIFVFFQN*HSTNLS
Trigger: ACTCAGATTAGTGCTATGCAAGTTTTGAAAGAACAC...AAATATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTGTTTCTTTCACAAACTaGGGTACCTACATTAAGCAT +
Preference number: 3 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLVSFTN*GTYIKH
Trigger: ATGCTTAATGTAGGTACCCAAGTTTGTGAAAGAAAC...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp ATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATTTGTTTCTTTCACAAACTaGGGTACCTACATTAAGCAT +
Preference number: 3 (lower is better)
Translates to: IPPKVTYIGFYRLGHIIFVSFTN*GTYIKH
Trigger: ATGCTTAATGTAGGTACCCAAGTTTGTGAAAGAAAC...AAATATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTTTATTTCATATTAGAATGGCTAGTCCAGCTTGTTTCTTGGGACCATTTGCTTCGTTTATGGCTTTATTaGTCTCCAGATTTATCTGGA +
Preference number: 3 (lower is better)
Translates to: FYFILEWLVQLVSWDHLLRLWLY*SPDLSG
Trigger: TCCAGATAAATCTGGAGACAAATAAAGCCATAAACG...AAGCAAATGGTCCCAAGAAACAAGCTGGACTAGCCATTCTAATATGAAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR-3UTR CAA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCATCAGTTTTCCTGTATTaGTCCAGAGTCATAGAGATT +
Preference number: 3 (lower is better)
Translates to: FKRFLCFLFKGFYLFICASVFLY*SRVIEI
Trigger: AATCTCTATGACTCTGGACAAATACAGGAAAACTGA...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp AAGCTGTGTTCTTTCAAAACTTGCATAGCACTAATCTaGGTCTTTCTGATAGAAGTCTCCATAGAGAAATCA +
Preference number: 3 (lower is better)
Translates to: KLCSFKTCIALI*VFLIEVSIEKS
Trigger: TGATTTCTCTATGGAGACTTCTATCAGAAAGACTCAGATTAGTGCTATGCAAGTTTTGAAAGAACACAGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp GCTGGTTCACATAAAGAGAATGTTATCTCAATTCATTaGATGTGTAAAGCATGCTTCTATAGTATGACCCAC +
Preference number: 3 (lower is better)
Translates to: AGSHKENVISIH*MCKACFYSMTH
Trigger: GTGGGTCATACTATAGAAGCATGCTTTACACATTCAATGAATTGAGATAACATTCTCTTTATGTGAACCAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp ATGATTGACATTTTGCTTGGATATAGTTGTCTGGATTaGAAGCTGTGTTCTTTCAAAACTTGCATAGCACTA +
Preference number: 3 (lower is better)
Translates to: MIDILLGYSCLD*KLCSFKTCIAL
Trigger: TAGTGCTATGCAAGTTTTGAAAGAACACAGCTTTCAATCCAGACAACTATATCCAAGCAAAATGTCAATCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR TCA 72 bp GAGGAAATACTGCGCTGTTGTACTGTATGCAGTGTATaGGAGAAGAACTGTTCTATTTTCAATAAAAACAAA +
Preference number: 3 (lower is better)
Translates to: EEILRCCTVCSV*EKNCSIFNKNK
Trigger: TTTGTTTTTATTGAAAATAGAACAGTTCTTCTCTCATACACTGCATACAGTACAACAGCGCAGTATTTCCTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp GATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTaGGTTACTGTATCCTGGTGGCTCTGGGTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: DENLKDPVPSCS*VTVSWWLWVGR
Trigger: GCGACCCACCCAGAGCCACCAGGATACAGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR TCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTTCAGCACAAGGGGGCTaGAGACTGCATAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFSAQGG*RLHNQG
Trigger: CCCTTGGTTATGCAGTCTTCAGCCCCCTTGTGCTGA...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR GCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTCTGAGCATGCCAACATaGAGGCAGAAGCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFLSMPT*RQKPIP
Trigger: AGGGATGGGCTTCTGCCTGCATGTTGGCATGCTCAG...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR GCA 90 bp CTGGGTGCAGATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTCTGAGCATGCCAACATaGAGGCAGAAGCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: LGADENLKDPVPSCSLVTLSMPT*RQKPIP
Trigger: AGGGATGGGCTTCTGCCTGCATGTTGGCATGCTCAG...AGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp TGGTGGCTCTGGGTGGGTCGCTCTTGGGCCAAGAATTaGAGCAGAAGTAGTGTTCTTACCTGTGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: WWLWVGRSWAKN*SRSSVLTCAHK
Trigger: CTTGTGAGCACAGGTAAGAACACTACTTCTGCTCAAATTCTTGGCCCAAGAGCGACCCACCCAGAGCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR CCA 90 bp CTGGGTGCAGATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTAGGAGAAATATCATGTaGCCACTGGCCCCTCCCATG +
Preference number: 4 (lower is better)
Translates to: LGADENLKDPVPSCSLVTRRNIM*PLAPPM
Trigger: CATGGGAGGGGCCAGTGGCCACATGATATTTCTCCT...AGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR CCA 90 bp CCTTCTTTCCACAGAAAGATAAGCAGGACATTTGCTAGAGCAATGCTGGACTCAATATCATGTGGCCACTaGCCCCTCCCATGGCACCCT +
Preference number: 4 (lower is better)
Translates to: PSFHRKISRTFARAMLDSISCGH*PLPWHP
Trigger: AGGGTGCCATGGGAGGGGCCAGTGGCCACATGATAT...TGAGTCCAGCATTGCTCTAGCAAATGTCCTGCTTATCTTTCTGTGGAAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp GAGCTGCGAAGAGTGGAGGGAGGAAATACTGCGCTGTaGTACTGTATGCAGTGTATGAGAGAAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: ELRRVEGGNTAL*YCMQCMREELF
Trigger: GAACAGTTCTTCTCTCATACACTGCATACAGTACAACAGCGCAGTATTTCCTCCCTCCACTCTTCGCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR TCA 90 bp AGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCTTTTCAGACCTGTACTTGTaGTGGAATGGATTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RVLCSSALDPGHMTPKTFSDLYL*WNGLGS
Trigger: TGAACCTAATCCATTCCATCACAAGTACAGGTCTGA...AAAGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR TCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCTCAGCACAAGGGGGCTaGAGACTGCATAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSSAQGG*RLHNQG
Trigger: CCCTTGGTTATGCAGTCTTCAGCCCCCTTGTGCTGA...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR GCA 90 bp CCTTCTTTCCACAGAAAGATAAGCAGGACATTTGCTAGAGCAATGCTGGACTCATCTGCTCCACCCAGATaGTCTGGGACTGATGATGAT +
Preference number: 4 (lower is better)
Translates to: PSFHRKISRTFARAMLDSSAPPR*SGTDDD
Trigger: ATCATCATCAGTCCCAGAGCATCTGGGTGGAGCAGA...TGAGTCCAGCATTGCTCTAGCAAATGTCCTGCTTATCTTTCTGTGGAAAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp GCACAAACTTCTATGAAAGTACCTCACACCACCAGATaGCATCATGGGGCATTGCGCATAGCTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AQTSMKVPHTTR*HHGALRIAVSF
Trigger: GAAGGAAACAGCTATGCGCAATGCCCCATGATGCAATCTGGTGGTGTGAGGTACTTTCATAGAAGTTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR TCA 90 bp CTGGGTGCAGATGAAAACCTGAAGGATCCTGTCCCCAGCTGTTCCTTGGTTACTTCTCCAGATAAACAATaGTCTTACAGCCTATGTCAT +
Preference number: 4 (lower is better)
Translates to: LGADENLKDPVPSCSLVTSPDKQ*SYSLCH
Trigger: ATGACATAGGCTGTAAGATCATTGTTTATCTGGAGA...AGTAACCAAGGAACAGCTGGGGACAGGATCCTTCAGGTTTTCATCTGCACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR TCA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTACCTCCCATGGCACCCTaGAACACTGCATCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLPPMAP*NTASLR
Trigger: TCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR GCA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCTCTGCTCCACCCAGATaGTCTGGGACTGATGATGAT +
Preference number: 4 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSSAPPR*SGTDDD
Trigger: ATCATCATCAGTCCCAGAGCATCTGGGTGGAGCAGA...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR CCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCAATATCATGTGGCCACTaGCCCCTCCCATGGCACCCT +
Preference number: 4 (lower is better)
Translates to: FKRFLCFLFKGFYLFICAISCGH*PLPWHP
Trigger: AGGGTGCCATGGGAGGGGCCAGTGGCCACATGATAT...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp CTCCTCATTATAGGCCTTTTCTTCAGCATCTTCACGTaGCTAGTTCTTCCTCTCTCAACAGTGCACAAACTG +
Preference number: 4 (lower is better)
Translates to: LLIIGLFFSIFT*LVLPLSTVHKL
Trigger: CAGTTTGTGCACTGTTGAGAGAGGAAGAACTAGCAACGTGAAGATGCTGAAGAAAAGGCCTATAATGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp TTTTCTGGAGTGTTTGGGTATCCTGGGCTAGCTGTGTaGAGAAAACTGGATTCTGATGATTCCAAGTATCCT +
Preference number: 4 (lower is better)
Translates to: FSGVFGYPGLAV*RKLDSDDSKYP
Trigger: AGGATACTTGGAATCATCAGAATCCAGTTTTCTCAACACAGCTAGCCCAGGATACCCAAACACTCCAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR CCA 90 bp CATAGCACTAATCTGAGTCTTTCTGATAGAAGTCTCCATAGAGAAATCAGTTATAGGAGAAATATCATGTaGCCACTGGCCCCTCCCATG +
Preference number: 4 (lower is better)
Translates to: HSTNLSLSDRSLHREISYRRNIM*PLAPPM
Trigger: CATGGGAGGGGCCAGTGGCCACATGATATTTCTCCT...ATAACTGATTTCTCTATGGAGACTTCTATCAGAAAGACTCAGATTAGTGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp TACATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTaGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACT +
Preference number: 4 (lower is better)
Translates to: YISCMQQNAGSC*HIQSVSLCLFT
Trigger: AGTAAAGAGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATTTTGCTGCATACAGGAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR GCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCAGGCACCCTGAAACACTaGATCTCTCAGAACCATGAG +
Preference number: 4 (lower is better)
Translates to: FKRFLCFLFKGFYLFICAGTLKH*ISQNHE
Trigger: CTCATGGTTCTGAGAGATGCAGTGTTTCAGGGTGCC...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR CCA 90 bp CTGATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATGCTGGTGGTGTTTGTaGAGGAGAAATATCATGTGG +
Preference number: 4 (lower is better)
Translates to: LIPPKVTYIGFYRLGHIICWWCL*RRNIMW
Trigger: CCACATGATATTTCTCCTCCACAAACACCACCAGCA...TATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp CCTCTGATTAGTCTGGCTAAGGGTTTATCTATCCTGTaGATTTTATCAAAGAACCAGCTCCTGGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: PLISLAKGLSIL*ILSKNQLLVLL
Trigger: CAACAAAACCAGGAGCTGGTTCTTTGATAAAATCAACAGGATAGATAAACCCTTAGCCAGACTAATCAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp TTCCATGTGTTTGTATACTTACTGCTGTGCCTGCTGTaGTTATTGCTATCTAGCTTTAATCCAATGCTCCTA +
Preference number: 4 (lower is better)
Translates to: FHVFVYLLLCLL*LLLSSFNPMLL
Trigger: TAGGAGCATTGGATTAAAGCTAGATAGCAATAACAACAGCAGGCACAGCAGTAAGTATACAAACACATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp TTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGTaGGGAGCAATTTCTTTGAGTGTTGTGTCAATGTTT +
Preference number: 4 (lower is better)
Translates to: FPLCPGFPEYCW*GAISLSVVSMF
Trigger: AAACATTGACACAACACTCAAAGAAATTGCTCCCAACCAACAATATTCAGGAAATCCAGGACACAATGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp TGTGACCTAAGGAATTTCACTTCTGGTCCAATCTATTaGGAGTTCTGTGGGCCTTTTGTATGTTTATGGTTA +
Preference number: 4 (lower is better)
Translates to: CDLRNFTSGPIY*EFCGPFVCLWL
Trigger: TAACCATAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATTCCTTAGGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR TCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCATCAGACCTGTACTTGTaGTGGAATGGATTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: FKRFLCFLFKGFYLFICASDLYL*WNGLGS
Trigger: TGAACCTAATCCATTCCATCACAAGTACAGGTCTGA...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp GTGTTTGTATACTTACTGCTGTGCCTGCTGTTGTTATaGCTATCTAGCTTTAATCCAATGCTCCTAAAAATC +
Preference number: 4 (lower is better)
Translates to: VFVYLLLCLLLL*LSSFNPMLLKI
Trigger: GATTTTTAGGAGCATTGGATTAAAGCTAGATAGCAATAACAACAGCAGGCACAGCAGTAAGTATACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp CCACATTGTACTCTGTCGAATATATTCATCACATATTaGTCCATCATAGTGTCACTTAGGTGTCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PHCTLSNIFITY*SIIVSLRCLPH
Trigger: ATGTGGAAGACACCTAAGTGACACTATGATGGACAAATATGTGATGAATATATTCGACAGAGTACAATGTGG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp GAACCTGAGATTCTCTCTTATATCTCCTGTATTCTGTaGGAGATGTTTAAATCTATGACTCCTGATCTCTTC +
Preference number: 4 (lower is better)
Translates to: EPEILSYISCIL*EMFKSMTPDLF
Trigger: GAAGAGATCAGGAGTCATAGATTTAAACATCTCCAACAGAATACAGGAGATATAAGAGAGAATCTCAGGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
3UTR CAA 72 bp GGATTTCCTGAATATTGTTGGTTGGGAGCAATTTCTTaGAGTGTTGTGTCAATGTTTTCTAGGATATCCTCT +
Preference number: 4 (lower is better)
Translates to: GFPEYCWLGAIS*SVVSMFSRISS
Trigger: AGAGGATATCCTAGAAAACATTGACACAACACTCAAAGAAATTGCTCCCAACCAACAATATTCAGGAAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR TCA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCATCTCCAGATAAACAATaGTCTTACAGCCTATGTCAT +
Preference number: 4 (lower is better)
Translates to: FKRFLCFLFKGFYLFICASPDKQ*SYSLCH
Trigger: ATGACATAGGCTGTAAGATCATTGTTTATCTGGAGA...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR GCA 90 bp CTTTGCTTTCTTTCTGGCACATGTAAGCATCATTATCATCATCAGAATCAGATCCTTTTGCAATCCTTTTaGAAGCAGAAGTATGATGTT +
Preference number: 4 (lower is better)
Translates to: LCFLSGTCKHHYHHQNQILLQSF*KQKYDV
Trigger: AACATCATACTTCTGCTTGCAAAAGGATTGCAAAAG...GATCTGATTCTGATGATGATAATGATGCTTACATGTGCCAGAAAGAAAGCAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR GCA 90 bp AATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTTTACTTTTGCAATCCTTTTaGAAGCAGAAGTATGATGTT +
Preference number: 4 (lower is better)
Translates to: NFTSGPIYLEFCGPFVCLLLQSF*KQKYDV
Trigger: AACATCATACTTCTGCTTGCAAAAGGATTGCAAAAG...TAAACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS CCA 90 bp GGACATGCTGGTGGTGTTTGTGGAGGAGAAATATCATGTGGCCACTaGCCCCTCCCATGGCACCCTGAAACACTGCATCTCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: GHAGGVCGGEISCGH*PLPWHPETLHLSEP
Trigger: TGGTTCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCCACATGATATTTCTCCTCCACAAACACCACCAGCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS TCA 90 bp TGGAGGAGAAATATCATGTGGCCACTGGCCCCTCCCATGGCACCCTaGAACACTGCATCTCTCAGAACCATGAGAGGGAGAACAATCCAT +
Preference number: 5 (lower is better)
Translates to: WRRNIMWPLAPPMAP*NTASLRTMRGRTIH
Trigger: ATGGATTGTTCTCCCTCTCATGGTTCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCCACATGATATTTCTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS GCA 90 bp AAATATCATGTGGCCACTGGCCCCTCCCATGGCACCCTGAAACACTaGATCTCTCAGAACCATGAGAGGGAGAACAATCCATTTTATTTC +
Preference number: 5 (lower is better)
Translates to: KYHVATGPSHGTLKH*ISQNHERENNPFYF
Trigger: GAAATAAAATGGATTGTTCTCCCTCTCATGGTTCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCCACATGATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR CAA 90 bp TCTGTTAAACTGTGTGTATGCTCTTTTCAGTTTCTTTTTGGAGGCACTCAGAGCCAGAAGGAGGACACTTaGGGCAGCTCTCAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SVKLCVCSFQFLFGGTQSQKEDT*GSSQLR
Trigger: CCTGAGCTGAGAGCTGCCCAAAGTGTCCTCCTTCTG...GCTCTGAGTGCCTCCAAAAAGAAACTGAAAAGAGCATACACACAGTTTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS TCA 90 bp AACATGCAGGCAGAAGCCCATCCCTGTGAATCAGCACAAGGGGGCTaGAGACTGCATAACCAAGGGTCAGAACCTTTTGAATATTTATCA +
Preference number: 5 (lower is better)
Translates to: NMQAEAHPCESAQGG*RLHNQGSEPFEYLS
Trigger: TGATAAATATTCAAAAGGTTCTGACCCTTGGTTATGCAGTCTTCAGCCCCCTTGTGCTGATTCACAGGGATGGGCTTCTGCCTGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS GCA 90 bp AGGCAGAAGCCCATCCCTGTGAATCAGCACAAGGGGGCTGAAGACTaGATAACCAAGGGTCAGAACCTTTTGAATATTTATCATCAAGGA +
Preference number: 5 (lower is better)
Translates to: RQKPIPVNQHKGAED*ITKGQNLLNIYHQG
Trigger: TCCTTGATGATAAATATTCAAAAGGTTCTGACCCTTGGTTATGCAGTCTTCAGCCCCCTTGTGCTGATTCACAGGGATGGGCTTCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR CAA 90 bp CTGATACCCCCAAAAGTCACTTACATTGGATTCTATAGGCTTGGGCATATTATATGTGCCATGCAGACTTaGGCCTTAGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: LIPPKVTYIGFYRLGHIICAMQT*ALVCST
Trigger: GGTGGAGCAGACTAAGGCCAAAGTCTGCATGGCACA...TATAATATGCCCAAGCCTATAGAATCCAATGTAAGTGACTTTTGGGGGTATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR CAA 90 bp TTATACTTAGATTTGGTCTTCCCATTGTGTCCTGGATTTCCTGAATATTGTTGGCAGAAGGAGGACACTTaGGGCAGCTCTCAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LYLDLVFPLCPGFPEYCWQKEDT*GSSQLR
Trigger: CCTGAGCTGAGAGCTGCCCAAAGTGTCCTCCTTCTG...CCAACAATATTCAGGAAATCCAGGACACAATGGGAAGACCAAATCTAAGTATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS GCA 90 bp ATTAAACCATTGAGTATCCAAAAGAATGAGAAGAATGGAAGGATGTaGCATGCAGACTTTGGCCTTAGTCTGCTCCACCCAGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: IKPLSIQKNEKNGRM*HADFGLSLLHPDAL
Trigger: CAGAGCATCTGGGTGGAGCAGACTAAGGCCAAAGTCTGCATGGCACATCCTTCCATTCTTCTCATTCTTTTGGATACTCAATGGTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS-3UTR CAA 90 bp TTTAAGAGATTTTTGTGTTTCCTATTTAAGGGCTTCTACCTGTTCATCTGTGCATGTGCCATGCAGACTTaGGCCTTAGTCTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: FKRFLCFLFKGFYLFICACAMQT*ALVCST
Trigger: GGTGGAGCAGACTAAGGCCAAAGTCTGCATGGCACA...TGCACAGATGAACAGGTAGAAGCCCTTAAATAGGAAACACAAAAATCTCTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS GCA 72 bp GTGGCCACTGGCCCCTCCCATGGCACCCTGAAACACTaGATCTCTCAGAACCATGAGAGGGAGAACAATCCA +
Preference number: 6 (lower is better)
Translates to: VATGPSHGTLKH*ISQNHERENNP
Trigger: TGGATTGTTCTCCCTCTCATGGTTCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS CCA 72 bp GGTGGTGTTTGTGGAGGAGAAATATCATGTGGCCACTaGCCCCTCCCATGGCACCCTGAAACACTGCATCTC +
Preference number: 6 (lower is better)
Translates to: GGVCGGEISCGH*PLPWHPETLHL
Trigger: GAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCCACATGATATTTCTCCTCCACAAACACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS TCA 72 bp AATATCATGTGGCCACTGGCCCCTCCCATGGCACCCTaGAACACTGCATCTCTCAGAACCATGAGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: NIMWPLAPPMAP*NTASLRTMRGR
Trigger: TCTCCCTCTCATGGTTCTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGCCACATGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS TCA 72 bp GCAGAAGCCCATCCCTGTGAATCAGCACAAGGGGGCTaGAGACTGCATAACCAAGGGTCAGAACCTTTTGAA +
Preference number: 6 (lower is better)
Translates to: AEAHPCESAQGG*RLHNQGSEPFE
Trigger: TTCAAAAGGTTCTGACCCTTGGTTATGCAGTCTTCAGCCCCCTTGTGCTGATTCACAGGGATGGGCTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS TCA 72 bp GGTGTATGGGTTTCTTCTCAGGGCTTCCCCACCAACTaGACATATAATGCACAGAAACAGACATGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: GVWVSSQGFPTN*TYNAQKQTCSP
Trigger: TGGGGAACATGTCTGTTTCTGTGCATTATATGTTCAGTTGGTGGGGAAGCCCTGAGAAGAAACCCATACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS GCA 72 bp TTGAGTATCCAAAAGAATGAGAAGAATGGAAGGATGTaGCATGCAGACTTTGGCCTTAGTCTGCTCCACCCA +
Preference number: 6 (lower is better)
Translates to: LSIQKNEKNGRM*HADFGLSLLHP
Trigger: TGGGTGGAGCAGACTAAGGCCAAAGTCTGCATGGCACATCCTTCCATTCTTCTCATTCTTTTGGATACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS GCA 72 bp CCCATCCCTGTGAATCAGCACAAGGGGGCTGAAGACTaGATAACCAAGGGTCAGAACCTTTTGAATATTTAT +
Preference number: 6 (lower is better)
Translates to: PIPVNQHKGAED*ITKGQNLLNIY
Trigger: ATAAATATTCAAAAGGTTCTGACCCTTGGTTATGCAGTCTTCAGCCCCCTTGTGCTGATTCACAGGGATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS TCA 72 bp CCATGGCACCCTGAAACACTGCATCTCTCAGAACCATaGGAGGGAGAACAATCCATTTTATTTCTCGACTTT +
Preference number: 6 (lower is better)
Translates to: PWHPETLHLSEP*EGEQSILFLDF
Trigger: AAAGTCGAGAAATAAAATGGATTGTTCTCCCTCTCATGGTTCTGAGAGATGCAGTGTTTCAGGGTGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2
CDS TCA 72 bp CATAAAATAGCAATAGTTCTTGCTGTTGTTAAGCTGTaGCATATTCAGACCTGTACTTGTGATGGAATGGAT +
Preference number: 6 (lower is better)
Translates to: HKIAIVLAVVKL*HIQTCTCDGMD
Trigger: ATCCATTCCATCACAAGTACAGGTCTGAATATGTCACAGCTTAACAACAGCAAGAACTATTGCTATTTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091721.3
ENSMUST00000227110.2
ENSMUST00000228656.2