Pregenerated sensors for VMN1R216 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000115697, ENSMUSG00000116057Ensembl transcript IDs: ENSMUST00000080253.5, ENSMUST00000228389.2, ENSMUST00000228802.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACCCAGTTCCCCAGTAAAGAGACAGAGACTAACAGACTGGATATaGAAACAGGACCCAGCATTTTGCTGCATACAGGAAATGTACCTC | + |
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Preference number: 1 (lower is better) Translates to: RPSSPVKRQRLTDWI*KQDPAFCCIQEMYL Trigger: GAGGTACATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGAACTGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR TCA 90 bp | AAGGTAGGCATATTAGAATTACACCAGACTTCTCACCAGAGACTATaGAAGCTAGAAGATCCTGGGCAGATCTCAGACAGACCCACAGAG | + |
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Preference number: 1 (lower is better) Translates to: KVGILELHQTSHQRL*KLEDPGQISDRPTE Trigger: CTCTGTGGGTCTGTCTGAGATCTGCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTAATATGCCTACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR GCA 90 bp | CAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATTTTGCTaGATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACATC | + |
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Preference number: 1 (lower is better) Translates to: QRLTDWICKQDPAFC*IQEMYLSVKDRLYI Trigger: GATGTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR GCA 90 bp | AGACAGAGACTAACAGACTGGATATGCAAACAGGACCCAGCATTTTaGTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTAC | + |
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Preference number: 1 (lower is better) Translates to: RQRLTDWICKQDPAF*CIQEMYLSVKDRLY Trigger: GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR GCA 90 bp | GAAGGAGCAGTCTGCCTTGAGAAACCTCTTAAAAACATTTCAGCATaGAACTCACGGGTGATTTACTATGCTCTTAGTCTGACTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: EGAVCLEKPLKNISA*NSRVIYYALSLTPS Trigger: AGAGGGAGTCAGACTAAGAGCATAGTAAATCACCCGTGAGTTGCATGCTGAAATGTTTTTAAGAGGTTTCTCAAGGCAGACTGCTCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR CCA 90 bp | ATCAATAGACCCAGTTCCCCAGTAAAGAGACAGAGACTAACAGACTaGATATGCAAACAGGACCCAGCATTTTGCTGCATACAGGAAATG | + |
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Preference number: 1 (lower is better) Translates to: INRPSSPVKRQRLTD*ICKQDPAFCCIQEM Trigger: CATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGAACTGGGTCTATTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR CCA 90 bp | AAAAACACATCCTTCAGAAGCAGAATGAAGGAAACAGATCCCAAATaGCAGGGTATAGAGAAATGCCTGCTATGCCAGTGTCCAGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: KNTSFRSRMKETDPK*QGIEKCLLCQCPVS Trigger: GCTTACTGGACACTGGCATAGCAGGCATTTCTCTATACCCTGCCATTTGGGATCTGTTTCCTTCATTCTGCTTCTGAAGGATGTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR TCA 90 bp | AATAGGTGTCAACTCTGTCCCAGAGCCTGTGTCTACAATTGTGTCTaGTATTGCATTTGTCTCTCCAGATGTTGGGACTCCAAAACAGAA | + |
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Preference number: 1 (lower is better) Translates to: NRCQLCPRACVYNCV*YCICLSRCWDSKTE Trigger: TTCTGTTTTGGAGTCCCAACATCTGGAGAGACAAATGCAATATCAGACACAATTGTAGACACAGGCTCTGGGACAGAGTTGACACCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR CCA 90 bp | CCATACAAGAGCATAATCAGGGAAGACCAGATGCACTCAGATGTGTaGTGGCCACTTTCATTTATACACCAAAACCAGAAGTACAATAGG | + |
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Preference number: 1 (lower is better) Translates to: PYKSIIREDQMHSDV*WPLSFIHQNQKYNR Trigger: CCTATTGTACTTCTGGTTTTGGTGTATAAATGAAAGTGGCCACCACACATCTGAGTGCATCTGGTCTTCCCTGATTATGCTCTTGTATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR TCA 90 bp | AAGATGAAAGCTGGCAAGCTCTATATACCCACAGCTTCATATTTCTaGTTTTATGAGGACCCAGCCACTAGCAGGATTAACAAATGGAGG | + |
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Preference number: 1 (lower is better) Translates to: KMKAGKLYIPTASYF*FYEDPATSRINKWR Trigger: CCTCCATTTGTTAATCCTGCTAGTGGCTGGGTCCTCATAAAATCAGAAATATGAAGCTGTGGGTATATAGAGCTTGCCAGCTTTCATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR CCA 90 bp | TACAAGAGCATAATCAGGGAAGACCAGATGCACTCAGATGTGTGGTaGCCACTTTCATTTATACACCAAAACCAGAAGTACAATAGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: YKSIIREDQMHSDVW*PLSFIHQNQKYNRC Trigger: ACACCTATTGTACTTCTGGTTTTGGTGTATAAATGAAAGTGGCCACCACACATCTGAGTGCATCTGGTCTTCCCTGATTATGCTCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR CCA 90 bp | TGGTTCATGTACTTAATTCCAGCTATCTCAGGAGGCAGAGGCAGATaGATCTCTAATTTCCAGGCCATGTTGTTTTACATAATGAGTATC | + |
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Preference number: 1 (lower is better) Translates to: WFMYLIPAISGGRGR*ISNFQAMLFYIMSI Trigger: GATACTCATTATGTAAAACAACATGGCCTGGAAATTAGAGATCCATCTGCCTCTGCCTCCTGAGATAGCTGGAATTAAGTACATGAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR TCA 90 bp | TTCACACAGAACTCAGAGATCTTTCAAACAGATGTGTTAGGAATGTaGCAAATGAGACTTTTCAAAGTCTTCATCTCCCAGAGTGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: FTQNSEIFQTDVLGM*QMRLFKVFISQSAW Trigger: CCAAGCACTCTGGGAGATGAAGACTTTGAAAAGTCTCATTTGTCACATTCCTAACACATCTGTTTGAAAGATCTCTGAGTTCTGTGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR CCA 90 bp | AAGTCCACCTTGGACTTGATCTCTCTGGGAACTATCCTAGACCATTaGCATGAGTCTGAGGTCTCAACTGTAATTAAAAGATTTATTGAA | + |
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Preference number: 1 (lower is better) Translates to: KSTLDLISLGTILDH*HESEVSTVIKRFIE Trigger: TTCAATAAATCTTTTAATTACAGTTGAGACCTCAGACTCATGCCAATGGTCTAGGATAGTTCCCAGAGAGATCAAGTCCAAGGTGGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR TCA 90 bp | CCGGCTTACTTCCTAGAGCCTGTACCATTCTTCAGTTACCTAGCATaGGCTACACGGAATGAAAAATCTATTTTCTTAATCAATATAATG | + |
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Preference number: 1 (lower is better) Translates to: PAYFLEPVPFFSYLA*ATRNEKSIFLINIM Trigger: CATTATATTGATTAAGAAAATAGATTTTTCATTCCGTGTAGCTCATGCTAGGTAACTGAAGAATGGTACAGGCTCTAGGAAGTAAGCCGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR TCA 90 bp | GGGGGAAAGATCCAAGAGTTTCTCATCTTGATAAGATTTGCCAAATaGTTCCTGCACCTTAATACTTGTAAAAACAGCTTTCTAGATGGA | + |
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Preference number: 1 (lower is better) Translates to: GGKIQEFLILIRFAK*FLHLNTCKNSFLDG Trigger: TCCATCTAGAAAGCTGTTTTTACAAGTATTAAGGTGCAGGAATCATTTGGCAAATCTTATCAAGATGAGAAACTCTTGGATCTTTCCCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR TCA 90 bp | GATATAAGAGAGAATCTCAGGTTCAGAGGATATCCTAGAAAACATTaGCACAACACTCAAAGAAATTGCTCCCAACCAACAATATTCAGG | + |
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Preference number: 1 (lower is better) Translates to: DIRENLRFRGYPRKH*HNTQRNCSQPTIFR Trigger: CCTGAATATTGTTGGTTGGGAGCAATTTCTTTGAGTGTTGTGTCAATGTTTTCTAGGATATCCTCTGAACCTGAGATTCTCTCTTATATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR CCA 90 bp | AGTTTAGAATTTATTGGAAATGAAGGCAGAGAATACCCAAATATATaGGACACAATGAAAGCAATGCTAGGAGCAAAACTCAGCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: SLEFIGNEGREYPNI*DTMKAMLGAKLSSE Trigger: CTCAGAGCTGAGTTTTGCTCCTAGCATTGCTTTCATTGTGTCCCATATATTTGGGTATTCTCTGCCTTCATTTCCAATAAATTCTAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR TCA 90 bp | AACATACAAAAGGCCCACAGAACTCCAAATAGATTGGACCAGAAGTaGAATTCCTTAGGTCACATAATAATCAAAACACCAGATGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: NIQKAHRTPNRLDQK*NSLGHIIIKTPDAK Trigger: TTTTGCATCTGGTGTTTTGATTATTATGTGACCTAAGGAATTTCACTTCTGGTCCAATCTATTTGGAGTTCTGTGGGCCTTTTGTATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR CAA 90 bp | GGGGCCTCTCCCCTTGGCCTCTTGAGCCTACCAGTTCTTCAGGGCTaGGAACCCTGTAATGCCAAGCACTTGGTATGTGCAGTGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: GASPLGLLSLPVLQG*EPCNAKHLVCAVNL Trigger: CAAATTCACTGCACATACCAAGTGCTTGGCATTACAGGGTTCCAAGCCCTGAAGAACTGGTAGGCTCAAGAGGCCAAGGGGAGAGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228802.2 |
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| 3UTR CAA 90 bp | CTGCCAGACCCAGAAGATCTGAGAGACTTCCTGTGGATGAAGAACTaGAAAGGCCGGCCTATATTGACAAGGCAAAGAGGGGCAGACAAT | + |
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Preference number: 2 (lower is better) Translates to: LPDPEDLRDFLWMKN*KGRPILTRQRGADN Trigger: ATTGTCTGCCCCTCTTTGCCTTGTCAATATAGGCCGGCCTTTCAAGTTCTTCATCCACAGGAAGTCTCTCAGATCTTCTGGGTCTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR CAA 90 bp | CTGAGAGACTTCCTGTGGATGAAGAACTTGAAAGGCCGGCCTATATaGACAAGGCAAAGAGGGGCAGACAATTCTCCAGTGTCCTACTTG | + |
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Preference number: 2 (lower is better) Translates to: LRDFLWMKNLKGRPI*TRQRGADNSPVSYL Trigger: CAAGTAGGACACTGGAGAATTGTCTGCCCCTCTTTGCCTTGTCAATATAGGCCGGCCTTTCAAGTTCTTCATCCACAGGAAGTCTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCTTCATTCTCCACCTGAGGTTCTATaGCAGCATCACCATTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: FGVMCPGSSALLHRTLHSPPEVL*QHHHFL Trigger: AAGAAAATGGTGATGCTGTCATAGAACCTCAGGTGG...AGAATGAAGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCAAATCCAATTCTCTATTACCTTCAGGCTTTCTGCCATTGGTCTCCTTATGCCTTCTTTAAGGCATaGGGCCTCTCCCCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SPNPILYYLQAFCHWSPYAFFKA*GLSPWP Trigger: AGGCCAAGGGGAGAGGCCCCATGCCTTAAAGAAGGC...ATAAGGAGACCAATGGCAGAAAGCCTGAAGGTAATAGAGAATTGGATTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCTTCATTCTGAACCAGGTAGGAGATaGAGCAAGCAGAAAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: FGVMCPGSSALLHRTLHSEPGRR*SKQKTK Trigger: TTTTGTTTTCTGCTTGCTTCATCTCCTACCTGGTTC...AGAATGAAGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR CAA 90 bp | ACTCTGTCCCAGAGCCTGTGTCTACAATTGTGTCTGATATTGCATTaGTCTCTCCAGATGTTGGGACTCCAAAACAGAACACGTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: TLSQSLCLQLCLILH*SLQMLGLQNRTRHL Trigger: GAGATGACGTGTTCTGTTTTGGAGTCCCAACATCTGGAGAGACAAATGCAATATCAGACACAATTGTAGACACAGGCTCTGGGACAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR CAA 90 bp | GTGTCAACTCTGTCCCAGAGCCTGTGTCTACAATTGTGTCTGATATaGCATTTGTCTCTCCAGATGTTGGGACTCCAAAACAGAACACGT | + |
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Preference number: 2 (lower is better) Translates to: VSTLSQSLCLQLCLI*HLSLQMLGLQNRTR Trigger: ACGTGTTCTGTTTTGGAGTCCCAACATCTGGAGAGACAAATGCAATATCAGACACAATTGTAGACACAGGCTCTGGGACAGAGTTGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATACACCAAAACCAGAAGTACAATAGGTGTCAACTCTGTCCCAGAGCCTGTTTCTCCTCTGCCACCTaGGGTTCTATGACAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: FIHQNQKYNRCQLCPRACFSSAT*GSMTAS Trigger: TGATGCTGTCATAGAACCTCAGGTGGCAGAGGAGAA...ACAGGCTCTGGGACAGAGTTGACACCTATTGTACTTCTGGTTTTGGTGTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATTAAGACTTCGGTTGTCACCCAAGGCTTTATTAGCTTTAGCTGCCAGACCCCTACTGGGCTGAAATaGAACTTTGGCAGCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SIKTSVVTQGFISFSCQTPTGLK*NFGSFL Trigger: AAGAAAGCTGCCAAAGTTCCATTTCAGCCCAGTAGG...GGTCTGGCAGCTAAAGCTAATAAAGCCTTGGGTGACAACCGAAGTCTTAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR TCA 90 bp | TACTTAATTCCAGCTATCTCAGGAGGCAGAGGCAGATGGATCTCTAATTTCCAGCCACCTGAGGTTCTATaGCAGCATCACCATTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: YLIPAISGGRGRWISNFQPPEVL*QHHHFL Trigger: AAGAAAATGGTGATGCTGTCATAGAACCTCAGGTGG...CTGGAAATTAGAGATCCATCTGCCTCTGCCTCCTGAGATAGCTGGAATTAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCTTCATTCTCTAGGAATAGTGAAATaGCAGGGAACATTTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: FGVMCPGSSALLHRTLHSLGIVK*QGTFED Trigger: ATCTTCAAATGTTCCCTGTCATTTCACTATTCCTAG...AGAATGAAGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAGCATACACACAGTTTAACAGAACACCTGAACGCTCTAGAACAAAAAGAAAGGCCGGCCTATATTaGCAAGGCAAAGAGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KRAYTQFNRTPERSRTKRKAGLY*QGKEGQ Trigger: CTGCCCCTCTTTGCCTTGTCAATATAGGCCGGCCTT...TCTTTTTGTTCTAGAGCGTTCAGGTGTTCTGTTAAACTGTGTGTATGCTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATTAAGACTTCGGTTGTCACCCAAGGCTTTATTAGCTTTAGCTGCCAGACCCATTCAGATAAAGGATaGTTCCTGGCATTCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SIKTSVVTQGFISFSCQTHSDKG*FLAFLF Trigger: GAAGAGGAATGCCAGGAAGCATCCTTTATCTGAATG...GGTCTGGCAGCTAAAGCTAATAAAGCCTTGGGTGACAACCGAAGTCTTAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTAGCCATTAACACCATCAGAAATCTGAGAAGGATGAAATTGGACAAGGATCAGTTCTTCAGGGCTTaGAACCCTGTAATGCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: QLAINTIRNLRRMKLDKDQFFRA*NPVMPS Trigger: GCTTGGCATTACAGGGTTCCAAGCCCTGAAGAACTG...ATCCTTGTCCAATTTCATCCTTCTCAGATTTCTGATGGTGTTAATGGCTAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCCAGATGTTGGGACTCCAAAACAGAACACGTCATCTCACAAATCAGTTCGAGAGGTTGATAATGTaGATGTCGGTATTGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SLQMLGLQNRTRHLTNQFERLIM*MSVLLG Trigger: CCCCAACAATACCGACATCCACATTATCAACCTCTC...GAACTGATTTGTGAGATGACGTGTTCTGTTTTGGAGTCCCAACATCTGGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACGAAAGGCAACAGTGGTaGTCTTTCAAAGACCACAGT | + |
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Preference number: 2 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYERQQW*SFKDHS Trigger: ACTGTGGTCTTTGAAAGACCACCACTGTTGCCTTTC...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACCTACTCAACACCTCATaGTACCTTCTCCAAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYLLNTS*YLLQKD Trigger: GTCCTTTTGGAGAAGGTACCATGAGGTGTTGAGTAG...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACAGTTCTTTGAAAACCTaGCCTGAAGCTAGAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYSSLKT*PEARKR Trigger: CCTCTTTCTAGCTTCAGGTCAGGTTTTCAAAGAACT...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAGCATACACACAGTTTAACAGAACACCTGAACGCTCTAGAACAAAAAGATCAGCACAAGAGGCCTaGGAATCACATGACCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: KRAYTQFNRTPERSRTKRSAQEA*ESHDQG Trigger: CCCTTGGTCATGTGATTCTCAGGCCTCTTGTGCTGA...TCTTTTTGTTCTAGAGCGTTCAGGTGTTCTGTTAAACTGTGTGTATGCTCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAACAGCTTTCTAGATGGACAATTAAATCACTTCATGAGGGCAGAGTGGAGAAAACATGCTTGGATCTaGAGGAGGGACTCCTATCCC | + |
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Preference number: 2 (lower is better) Translates to: KNSFLDGQLNHFMRAEWRKHAWI*RRDSYP Trigger: GGGATAGGAGTCCCTCCTTCAGATCCAAGCATGTTT...TCTCCACTCTGCCCTCATGAAGTGATTTAATTGTCCATCTAGAAAGCTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACTCTTCACTTGCTCTTTaGTTTAGAACAGCCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYSSLAL*FRTASC Trigger: GCAAGAGGCTGTTCTAAACCAAAGAGCAAGTGAAGA...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACCTTCATGTTTCCTACTaGGCTGAAATGGAACTTTGG | + |
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Preference number: 2 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYLHVSY*AEMELW Trigger: CCAAAGTTCCATTTCAGCCCAGTAGGAAACATGAAG...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAACAGCTTTCTAGATGGACAATTAAATCACTTCATGAGGGCAGAGTGGAGAACCAGCATTGATGTCTaGAAGGCAGTCATCTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: KNSFLDGQLNHFMRAEWRTSIDV*KAVICL Trigger: TAGGCAGATGACTGCCTTTCAGACATCAATGCTGGT...TCTCCACTCTGCCCTCATGAAGTGATTTAATTGTCCATCTAGAAAGCTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATTAAGACTTCGGTTGTCACCCAAGGCTTTATTAGCTTTAGCTGCCAGACCAAAAACATTTCAGCATaGAACTCACGGGTGATTTAC | + |
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Preference number: 2 (lower is better) Translates to: SIKTSVVTQGFISFSCQTKNISA*NSRVIY Trigger: GTAAATCACCCGTGAGTTGCATGCTGAAATGTTTTT...GGTCTGGCAGCTAAAGCTAATAAAGCCTTGGGTGACAACCGAAGTCTTAATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
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| 3UTR-3UTR GCA 90 bp | AATGAGACTTTTCAAAGTCTTCATCTCCCAGAGTGCTTGGCAACATTCACTCTGAATAGCCTAAACTATTaGCCCAATGTAGTGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: NETFQSLHLPECLATFTLNSLNY*PNVVVL Trigger: CAGCACCACTACATTGGGGCAATAGTTTAGGCTATT...CAGAGTGAATGTTGCCAAGCACTCTGGGAGATGAAGACTTTGAAAAGTCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACGGCAGGAGAAGTTTGTaGGTCCTTATAAGCATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYGRRSL*VLISIK Trigger: TTTTATGCTTATAAGGACCCACAAACTTCTCCTGCC...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTAGCCATTAACACCATCAGAAATCTGAGAAGGATGAAATTGGACAAGGATACTATCCTAGACCATTaGCATGAGTCTGAGGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QLAINTIRNLRRMKLDKDTILDH*HESEVS Trigger: TGAGACCTCAGACTCATGCCAATGGTCTAGGATAGT...ATCCTTGTCCAATTTCATCCTTCTCAGATTTCTGATGGTGTTAATGGCTAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTTAATTCCAGCTATCTCAGGAGGCAGAGGCAGATGGATCTCTAATTTCCAGATGCACTCAGATGTGTaGTGGCCACTTTCATTTATA | + |
|
Preference number: 2 (lower is better) Translates to: YLIPAISGGRGRWISNFQMHSDV*WPLSFI Trigger: TATAAATGAAAGTGGCCACCACACATCTGAGTGCAT...CTGGAAATTAGAGATCCATCTGCCTCTGCCTCCTGAGATAGCTGGAATTAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACTACTCACCTCAACTCTaGTGGAACAATTTATTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYYSPQL*WNNLFA Trigger: TGCAAATAAATTGTTCCATCAGAGTTGAGGTGAGTA...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAAACAGCTTTCTAGATGGACAATTAAATCACTTCATGAGGGCAGAGTGGAGAGGCCTGAGAATCACATaGCCAAGGGTCAGAAATATT | + |
|
Preference number: 2 (lower is better) Translates to: KNSFLDGQLNHFMRAEWRGLRIT*PRVRNI Trigger: AATATTTCTGACCCTTGGTCATGTGATTCTCAGGCC...TCTCCACTCTGCCCTCATGAAGTGATTTAATTGTCCATCTAGAAAGCTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | TACTTAATTCCAGCTATCTCAGGAGGCAGAGGCAGATGGATCTCTAATTTCCAGTACAGTTTATCTCTGTaGAATAATGAGCACTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: YLIPAISGGRGRWISNFQYSLSL*NNEHCH Trigger: ATGGCAGTGCTCATTATTTCACAGAGATAAACTGTA...CTGGAAATTAGAGATCCATCTGCCTCTGCCTCCTGAGATAGCTGGAATTAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR GCA 90 bp | TCACCAAATCCAATTCTCTATTACCTTCAGGCTTTCTGCCATTGGTCTCCTTATCATTCAGATAAAGGATaGTTCCTGGCATTCCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SPNPILYYLQAFCHWSPYHSDKG*FLAFLF Trigger: GAAGAGGAATGCCAGGAAGCATCCTTTATCTGAATG...ATAAGGAGACCAATGGCAGAAAGCCTGAAGGTAATAGAGAATTGGATTTGGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACCATCTTGATAAGATTTaGCAAATGATTCCTGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYHLDKI*QMIPAP Trigger: AGGTGCAGGAATCATTTGGCAAATCTTATCAAGATG...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGTGTTTCCTACTGGGCTaGAATGGAACTTTGGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: NPYSLISFNINRPSSPVKCFLLG*NGTLAA Trigger: AGCTGCCAAAGTTCCATTTCAGCCCAGTAGGAAACA...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCAACACCATACACTCATCAATGGACAGATCATGGAAACACAGACTAAACAGTTCTTTGAAAACCTaGCCTGAAGCTAGAAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: EFNTIHSSMDRSWKHRLNSSLKT*PEARKR Trigger: CCTCTTTCTAGCTTCAGGTCAGGTTTTCAAAGAACT...GTTTAGTCTGTGTTTCCATGATCTGTCCATTGATGAGTGTATGGTGTTGAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCAACACCATACACTCATCAATGGACAGATCATGGAAACACAGACTAAACATGGAGGTAGTTCTTTaGAAACCTGACCTGAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: EFNTIHSSMDRSWKHRLNMEVVL*KPDLKL Trigger: TAGCTTCAGGTCAGGTTTTCAAAGAACTACCTCCAT...GTTTAGTCTGTGTTTCCATGATCTGTCCATTGATGAGTGTATGGTGTTGAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCAACACCATACACTCATCAATGGACAGATCATGGAAACACAGACTAAACACAGCTTCATATTTCTaGTTTTATGAGGACCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: EFNTIHSSMDRSWKHRLNTASYF*FYEDPA Trigger: GGCTGGGTCCTCATAAAATCAGAAATATGAAGCTGT...GTTTAGTCTGTGTTTCCATGATCTGTCCATTGATGAGTGTATGGTGTTGAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCTCATCCTGAGAACAATTTTCATCTCATGGGTCAGATGGTAGGTACCCATGGCAGGAGAAGTTTGTaGGTCCTTATAAGCATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FSHPENNFHLMGQMVGTHGRRSL*VLISIK Trigger: TTTTATGCTTATAAGGACCCACAAACTTCTCCTGCC...ATGGGTACCTACCATCTGACCCATGAGATGAAAATTGTTCTCAGGATGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAACAGCTTTCTAGATGGACAATTAAATCACTTCATGAGGGCAGAGTGGAGATTCATGCTGATTTTCTaGTGGAATGGGGAGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: KNSFLDGQLNHFMRAEWRFMLIF*WNGEAF Trigger: AAAAGCCTCCCCATTCCACCAGAAAATCAGCATGAA...TCTCCACTCTGCCCTCATGAAGTGATTTAATTGTCCATCTAGAAAGCTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTGGAAATGAAGGCAGAGAATACCCAAATATATGGGACACAATGAAAGCAAGCAAAACTCAGCTCTaGGTGCCTCCAAAAAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FIGNEGREYPNIWDTMKASKTQL*VPPKRN Trigger: GTTTCTTTTTGGAGGCACTCAGAGCTGAGTTTTGCT...TGCTTTCATTGTGTCCCATATATTTGGGTATTCTCTGCCTTCATTTCCAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAACAGCTTTCTAGATGGACAATTAAATCACTTCATGAGGGCAGAGTGGAGAAAACTCAGCTCTGAGTaGCTCCAAAAAGAAACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KNSFLDGQLNHFMRAEWRKLSSE*LQKETE Trigger: TTCAGTTTCTTTTTGGAGGCACTCAGAGCTGAGTTT...TCTCCACTCTGCCCTCATGAAGTGATTTAATTGTCCATCTAGAAAGCTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATTCAACACCATACACTCATCAATGGACAGATCATGGAAACACAGACTAAACAGCTGCATCTGCGCTTaGTGTTGTCAAACTAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: EFNTIHSSMDRSWKHRLNSCICA*CCQTNK Trigger: TTTATTAGTTTGACAACAGCAAGCGCAGATGCAGCT...GTTTAGTCTGTGTTTCCATGATCTGTCCATTGATGAGTGTATGGTGTTGAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGGAGAGGTTGATAATGTaGATGTCGGTATTGTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NPYSLISFNINRPSSPVKERLIM*MSVLLG Trigger: CCCCAACAATACCGACATCCACATTATCAACCTCTC...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CAA 90 bp | ATCAGATTCTACTACCAAAGCCTGTATTCAACAAAACTCGGGAATTaGGATGAAATGGACAGTTTTCTAGACAGATACCAGATACCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: IRFYYQSLYSTKLGN*DEMDSFLDRYQIPK Trigger: CTTAGGTATCTGGTATCTGTCTAGAAAACTGTCCATTTCATCCAAATTCCCGAGTTTTGTTGAATACAGGCTTTGGTAGTAGAATCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGGTCATGTCCTCTTTGTaGGAGACCATTCAGATAAAG | + |
|
Preference number: 2 (lower is better) Translates to: NPYSLISFNINRPSSPVKVMSSL*ETIQIK Trigger: CTTTATCTGAATGGTCTCTCACAAAGAGGACATGAC...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAAACAGCTTTCTAGATGGACAATTAAATCACTTCATGAGGGCAGAGTGGAGATACTCACCTCAACTCTaGTGGAACAATTTATTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KNSFLDGQLNHFMRAEWRYSPQL*WNNLFA Trigger: TGCAAATAAATTGTTCCATCAGAGTTGAGGTGAGTA...TCTCCACTCTGCCCTCATGAAGTGATTTAATTGTCCATCTAGAAAGCTGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGTCAGTTTACCAGCATTaGTGTCTGAAAGGCAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NPYSLISFNINRPSSPVKSVYQH*CLKGSH Trigger: ATGACTGCCTTTCAGACATCAATGCTGGTAAACTGA...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTATTGGAAATGAAGGCAGAGAATACCCAAATATATGGGACACAATGAAAGCATTCATAAGCAGTTTGTaGATGTCTGCAGATGTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: FIGNEGREYPNIWDTMKAFISSL*MSADVG Trigger: GCCTACATCTGCAGACATGCACAAACTGCTTATGAA...TGCTTTCATTGTGTCCCATATATTTGGGTATTCTCTGCCTTCATTTCCAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGTCTTCACTTGCTCTTTaGTTTAGAACAGCCTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: NPYSLISFNINRPSSPVKSSLAL*FRTASC Trigger: GCAAGAGGCTGTTCTAAACCAAAGAGCAAGTGAAGA...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CAA 90 bp | AGACAATTCTCCAGTGTCCTACTTGTCCATATCTGGGCAGGGTTCTaGTGTTTACATTTAACTTTACATTTTGTCAAGACTTTAAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: RQFSSVLLVHIWAGF*CLHLTLHFVKTLSI Trigger: GATACTTAAAGTCTTGACAAAATGTAAAGTTAAATGTAAACACAAGAACCCTGCCCAGATATGGACAAGTAGGACACTGGAGAATTGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAGCATACACACAGTTTAACAGAACACCTGAACGCTCTAGAACAAAAAGATACAGTTTATCTCTGTaGAATAATGAGCACTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KRAYTQFNRTPERSRTKRYSLSL*NNEHCH Trigger: ATGGCAGTGCTCATTATTTCACAGAGATAAACTGTA...TCTTTTTGTTCTAGAGCGTTCAGGTGTTCTGTTAAACTGTGTGTATGCTCTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGTTTCTGGACAATCTATaGTCTAAAAGCAAGGACACC | + |
|
Preference number: 2 (lower is better) Translates to: NPYSLISFNINRPSSPVKFLDNL*SKSKDT Trigger: GGTGTCCTTGCTTTTAGAGCATAGATTGTCCAGAAA...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGTTTGAAGATGAAAGCTaGCAAGCTCTATATACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: NPYSLISFNINRPSSPVKFEDES*QALYTH Trigger: GTGGGTATATAGAGCTTGCCAGCTTTCATCTTCAAA...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGAGCATACACACAGTTTAACAGAACACCTGAACGCTCTAGAACAAAAAGAATATTTAAACAAACATaGTTGGATCTGAAGGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KRAYTQFNRTPERSRTKRIFKQT*LDLKEG Trigger: TCCCTCCTTCAGATCCAAGCATGTTTGTTTAAATAT...TCTTTTTGTTCTAGAGCGTTCAGGTGTTCTGTTAAACTGTGTGTATGCTCTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR TCA 72 bp | CTAGGTGGTTACCCTAGGCTCCTCCAGAGTGGTCTTTaGCACAGGAGAGCATTAAGACTTCGGTTGTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LGGYPRLLQSGL*HRRALRLRLSP Trigger: GGGTGACAACCGAAGTCTTAATGCTCTCCTGTGTCAAAGACCACTCTGGAGGAGCCTAGGGTAACCACCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCTTCATTCTATGTGGATGTCGGTATaGTTGGGGTGTGAGGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: FGVMCPGSSALLHRTLHSMWMSV*LGCEAR Trigger: CCTAGCCTCACACCCCAACAATACCGACATCCACAT...AGAATGAAGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGGGCAGCAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGATGTCTGATATTGCATTaGTCTCTCCAGATGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRAASSSQLKGSSVEKLGCLILH*SLQMLG Trigger: TCCCAACATCTGGAGAGACAAATGCAATATCAGACA...TCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGCTGCCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR GCA 72 bp | GATCCCAAATGGCAGGGTATAGAGAAATGCCTGCTATaGCAGTGTCCAGTAAGCCACAGCAAGGGACAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: DPKWQGIEKCLL*QCPVSHSKGQY Trigger: ATACTGTCCCTTGCTGTGGCTTACTGGACACTGGCATAGCAGGCATTTCTCTATACCCTGCCATTTGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR TCA 72 bp | GTCTCCTCAGAGCTTCAGTTTACCAGCATTGATGTCTaGAAGGCAGTCATCTGCCTAAGCTACAGGGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: VSSELQFTSIDV*KAVICLSYRDE Trigger: CTCATCCCTGTAGCTTAGGCAGATGACTGCCTTTCAGACATCAATGCTGGTAAACTGAAGCTCTGAGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGGGCAGCAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGACAAGGCAAAGCCATTTaGGTGTATATAGCATTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RRAASSSQLKGSSVEKLGQGKAI*VYIALD Trigger: ATCTAATGCTATATACACCAAAATGGCTTTGCCTTG...TCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGCTGCCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTCATCCTGAGAACAATTTTCATCTCATGGGTCAGATGGTAGGTACCCATTCTCCCCTTGGCCTCTaGAGCCTACCAGTTCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FSHPENNFHLMGQMVGTHSPLGL*SLPVLQ Trigger: CTGAAGAACTGGTAGGCTCAAGAGGCCAAGGGGAGA...ATGGGTACCTACCATCTGACCCATGAGATGAAAATTGTTCTCAGGATGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATCCCAAATGGCAGGGTATAGAGAAATGCCTGCTATGCCAGTGTCCAGTAAGAAGCTGAGTGAGAGGTaGATAATGTGGATGTCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: RSQMAGYREMPAMPVSSKKLSER*IMWMSV Trigger: TACCGACATCCACATTATCAACCTCTCACTCAGCTT...CTTACTGGACACTGGCATAGCAGGCATTTCTCTATACCCTGCCATTTGGGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCTTCATTCTAAGGAGCAGTCTGCCTaGAGAAACCTCTTAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: FGVMCPGSSALLHRTLHSKEQSA*RNLLKT Trigger: TGTTTTTAAGAGGTTTCTCAAGGCAGACTGCTCCTT...AGAATGAAGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR TCA 72 bp | AGGTTAGGTCTCCTCAGAGCTTCAGTTTACCAGCATTaGTGTCTGAAAGGCAGTCATCTGCCTAAGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: RLGLLRASVYQH*CLKGSHLPKLQ Trigger: CTGTAGCTTAGGCAGATGACTGCCTTTCAGACATCAATGCTGGTAAACTGAAGCTCTGAGGAGACCTAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR TCA 72 bp | TGGAGAATGAGGTGTCCCTGTCACTTTAGGATACAGTaGAGGTTAGGTCTCCTCAGAGCTTCAGTTTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: WRMRCPCHFRIQ*RLGLLRASVYQ Trigger: CTGGTAAACTGAAGCTCTGAGGAGACCTAACCTTCACTGTATCCTAAAGTGACAGGGACACCTCATTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR TCA 72 bp | CAACTCTGTCCCAGAGCCTGTGTCTACAATTGTGTCTaGTATTGCATTTGTCTCTCCAGATGTTGGGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLCPRACVYNCV*YCICLSRCWDS Trigger: GGAGTCCCAACATCTGGAGAGACAAATGCAATATCAGACACAATTGTAGACACAGGCTCTGGGACAGAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR CCA 72 bp | CCCAGTTCCCCAGTAAAGAGACAGAGACTAACAGACTaGATATGCAAACAGGACCCAGCATTTTGCTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: PSSPVKRQRLTD*ICKQDPAFCCI Trigger: TATGCAGCAAAATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGTCTCTGTCTCTTTACTGGGGAACTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTAGCCATTAACACCATCAGAAATCTGAGAAGGATGAAATTGGACAAGGATCCAGTTCTTCAGGGCTaGGAACCCTGTAATGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLAINTIRNLRRMKLDKDPVLQG*EPCNAK Trigger: CTTGGCATTACAGGGTTCCAAGCCCTGAAGAACTGG...ATCCTTGTCCAATTTCATCCTTCTCAGATTTCTGATGGTGTTAATGGCTAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGGGTCATGTGTCCTGGGTCCAGTGCACTGCTACATAGGACTCTTCATTCTGGAGTCAGATACATATaGCTAGTGGGTAATAACATG | + |
|
Preference number: 3 (lower is better) Translates to: FGVMCPGSSALLHRTLHSGVRYI*LVGNNM Trigger: CATGTTATTACCCACTAGCAATATGTATCTGACTCC...AGAATGAAGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR CCA 72 bp | TCCTTCAGAAGCAGAATGAAGGAAACAGATCCCAAATaGCAGGGTATAGAGAAATGCCTGCTATGCCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SFRSRMKETDPK*QGIEKCLLCQC Trigger: ACACTGGCATAGCAGGCATTTCTCTATACCCTGCCATTTGGGATCTGTTTCCTTCATTCTGCTTCTGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACAAGCTGAGTGAGAGGTaGATAATGTGGATGTCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYKLSER*IMWMSV Trigger: TACCGACATCCACATTATCAACCTCTCACTCAGCTT...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTAGCCATTAACACCATCAGAAATCTGAGAAGGATGAAATTGGACAAGGATGGAATGGGGAGGCTTTaGAAACCTTCAAATCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: QLAINTIRNLRRMKLDKDGMGRL*KPSNPP Trigger: GGGTGGATTTGAAGGTTTCAAAAGCCTCCCCATTCC...ATCCTTGTCCAATTTCATCCTTCTCAGATTTCTGATGGTGTTAATGGCTAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR TCA 72 bp | GCTGGCAAGCTCTATATACCCACAGCTTCATATTTCTaGTTTTATGAGGACCCAGCCACTAGCAGGATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: AGKLYIPTASYF*FYEDPATSRIN Trigger: GTTAATCCTGCTAGTGGCTGGGTCCTCATAAAATCAGAAATATGAAGCTGTGGGTATATAGAGCTTGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR TCA 72 bp | CCAAACCTCCCACACTGCCATTACAGTTTATCTCTGTaGAATAATGAGCACTGCCATGTACAGCATTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PNLPHCHYSLSL*NNEHCHVQHSP Trigger: AGGAGAATGCTGTACATGGCAGTGCTCATTATTTCACAGAGATAAACTGTAATGGCAGTGTGGGAGGTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR TCA 72 bp | CCCAGGATACCCAAACACTCCAGAAAAACAAGACTCTaGTTTAAGGGCACATCTCCTGATGATAGAGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: PRIPKHSRKTRL*FKGTSPDDRGS Trigger: AGATCCTCTATCATCAGGAGATGTGCCCTTAAATCAGAGTCTTGTTTTTCTGGAGTGTTTGGGTATCCTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR GCA 72 bp | CATGTCCTCTTTGTGAGAGACCATTCAGATAAAGGATaGTTCCTGGCATTCCTCTTCACTTGCTCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HVLFVRDHSDKG*FLAFLFTCSLV Trigger: AACCAAAGAGCAAGTGAAGAGGAATGCCAGGAAGCATCCTTTATCTGAATGGTCTCTCACAAAGAGGACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR GCA 72 bp | AGGTCTTTGGGGTCATGTGTCCTGGGTCCAGTGCACTaGTACATAGGACTCTTCATTCTAGACATTATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RSLGSCVLGPVH*YIGLFILDIIN Trigger: ATTTATAATGTCTAGAATGAAGAGTCCTATGTAGCAGTGCACTGGACCCAGGACACATGACCCCAAAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR GCA 72 bp | ACAGACTGGATATGCAAACAGGACCCAGCATTTTGCTaGATACAGGAAATGTACCTCAGTGTCAAAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TDWICKQDPAFC*IQEMYLSVKDR Trigger: TCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTTGCATATCCAGTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR GCA 72 bp | CTAACAGACTGGATATGCAAACAGGACCCAGCATTTTaGTGCATACAGGAAATGTACCTCAGTGTCAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTDWICKQDPAF*CIQEMYLSVKD Trigger: GTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CCA 72 bp | CTAGATGGACAATTAAATCACTTCATGAGGGCAGAGTaGAGAATGAGGTGTCCCTGTCACTTTAGGATACAG | + |
|
Preference number: 3 (lower is better) Translates to: LDGQLNHFMRAE*RMRCPCHFRIQ Trigger: CTGTATCCTAAAGTGACAGGGACACCTCATTCTCCACTCTGCCCTCATGAAGTGATTTAATTGTCCATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CCA 72 bp | AGCATAATCAGGGAAGACCAGATGCACTCAGATGTGTaGTGGCCACTTTCATTTATACACCAAAACCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SIIREDQMHSDV*WPLSFIHQNQK Trigger: CTTCTGGTTTTGGTGTATAAATGAAAGTGGCCACCACACATCTGAGTGCATCTGGTCTTCCCTGATTATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR GCA 72 bp | ACAAATGAGACTTTTCAAAGTCTTCATCTCCCAGAGTaGTTGGCAACATTCACTCTGATGTCCAGATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TNETFQSLHLPE*LATFTLMSRSV Trigger: CACTGATCTGGACATCAGAGTGAATGTTGCCAAGCACTCTGGGAGATGAAGACTTTGAAAAGTCTCATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CCA 72 bp | AAGGCAGTCATCTGCCTAAGCTACAGGGATGAGATTTaGTTTCACACAGAACTCAGAGATCTTTCAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KAVICLSYRDEI*FHTELRDLSNR Trigger: TCTGTTTGAAAGATCTCTGAGTTCTGTGTGAAACCAAATCTCATCCCTGTAGCTTAGGCAGATGACTGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CCA 72 bp | GAAAAGAAAGGTGACTCAAAACGAGAAAGGCAACAGTaGTGGTCTTTCAAAGACCACAGTGGTTCATGTACT | + |
|
Preference number: 3 (lower is better) Translates to: EKKGDSKRERQQ*WSFKDHSGSCT Trigger: AGTACATGAACCACTGTGGTCTTTGAAAGACCACCACTGTTGCCTTTCTCGTTTTGAGTCACCTTTCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CCA 72 bp | ATAATCAGGGAAGACCAGATGCACTCAGATGTGTGGTaGCCACTTTCATTTATACACCAAAACCAGAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: IIREDQMHSDVW*PLSFIHQNQKY Trigger: GTACTTCTGGTTTTGGTGTATAAATGAAAGTGGCCACCACACATCTGAGTGCATCTGGTCTTCCCTGATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR TCA 72 bp | ATATTAGAATTACACCAGACTTCTCACCAGAGACTATaGAAGCTAGAAGATCCTGGGCAGATCTCAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILELHQTSHQRL*KLEDPGQISDR Trigger: TCTGTCTGAGATCTGCCCAGGATCTTCTAGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAATTCTAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CCA 72 bp | ATATACAGTATATATTCTTACCAGTTCTTCAGGGCTTaGAACCCTGTAATGCCAAGCACTTGGTATGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IYSIYSYQFFRA*NPVMPSTWYVQ Trigger: CTGCACATACCAAGTGCTTGGCATTACAGGGTTCCAAGCCCTGAAGAACTGGTAAGAATATATACTGTATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCAACACCATACACTCATCAATGGACAGATCATGGAAACACAGACTAAACGAGGTAGAGGACATGTaGGTAGTTCTTATGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EFNTIHSSMDRSWKHRLNEVEDM*VVLMEK Trigger: CTTCTCCATAAGAACTACCAACATGTCCTCTACCTC...GTTTAGTCTGTGTTTCCATGATCTGTCCATTGATGAGTGTATGGTGTTGAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGCTTGTCAAGTCCACCTaGGACTTGATCTCTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NPYSLISFNINRPSSPVKLVKST*DLISLG Trigger: TCCCAGAGAGATCAAGTCCAAGGTGGACTTGACAAG...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCAACACCATACACTCATCAATGGACAGATCATGGAAACACAGACTAAACCTATGTTTTGGGAACTaGTCAAGTCCACCTTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: EFNTIHSSMDRSWKHRLNLCFGN*SSPPWT Trigger: AGTCCAAGGTGGACTTGACAAGTTCCCAAAACATAG...GTTTAGTCTGTGTTTCCATGATCTGTCCATTGATGAGTGTATGGTGTTGAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCATTTTGCTGCATACAGGAAATGTACCTCAGTGTCAAAGACAGACTCTACTATTTCATAAGCAGTTaGTGCATGTCTGCAGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: PAFCCIQEMYLSVKDRLYYFISS*CMSADV Trigger: TACATCTGCAGACATGCACAAACTGCTTATGAAATA...GTAGAGTCTGTCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGAGACTTTTCAAAGTCTTCATCTCCCAGAGTGCTTGGCAACATTCACTCTGCAAGGCAAAGCCATTTaGGTGTATATAGCATTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NETFQSLHLPECLATFTLQGKAI*VYIALD Trigger: ATCTAATGCTATATACACCAAAATGGCTTTGCCTTG...CAGAGTGAATGTTGCCAAGCACTCTGGGAGATGAAGACTTTGAAAAGTCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAACAGCTTTCTAGATGGACAATTAAATCACTTCATGAGGGCAGAGTGGAGATGTAATGCCAAGCACTaGGTATGTGCAGTGAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: KNSFLDGQLNHFMRAEWRCNAKH*VCAVNL Trigger: CAAATTCACTGCACATACCAAGTGCTTGGCATTACA...TCTCCACTCTGCCCTCATGAAGTGATTTAATTGTCCATCTAGAAAGCTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR TCA 72 bp | GAGAATCTCAGGTTCAGAGGATATCCTAGAAAACATTaGCACAACACTCAAAGAAATTGCTCCCAACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: ENLRFRGYPRKH*HNTQRNCSQPT Trigger: TGTTGGTTGGGAGCAATTTCTTTGAGTGTTGTGTCAATGTTTTCTAGGATATCCTCTGAACCTGAGATTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR GCA 72 bp | TTCTATGAAGTCATATTTACACCGCATATTTTCCCTTaGAGACAGTGGTTTCTGTCTAATCAGGAACCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: FYEVIFTPHIFP*RQWFLSNQEPV Trigger: GACAGGTTCCTGATTAGACAGAAACCACTGTCTGCAAGGGAAAATATGCGGTGTAAATATGACTTCATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CCA 72 bp | GTCATATTTACACCGCATATTTTCCCTTGCAGACAGTaGTTTCTGTCTAATCAGGAACCTGTCACAATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VIFTPHIFPCRQ*FLSNQEPVTIF Trigger: GAAAATTGTGACAGGTTCCTGATTAGACAGAAACCACTGTCTGCAAGGGAAAATATGCGGTGTAAATATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGCACATAGTGAGTGCTTaGCAAATAAGTAGTGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: NPYSLISFNINRPSSPVKHIVSA*QISSGV Trigger: GACTCCACTACTTATTTGCAAAGCACTCACTATGTG...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCCCTATTCCTTAATATCTTTTAACATCAATAGACCCAGTTCCCCAGTAAAGTTTAAACAAACATGCTaGGATCTGAAGGAGGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: NPYSLISFNINRPSSPVKFKQTC*DLKEGL Trigger: GAGTCCCTCCTTCAGATCCAAGCATGTTTGTTTAAA...CTTTACTGGGGAACTGGGTCTATTGATGTTAAAAGATATTAAGGAATAGGGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR TCA 72 bp | TTCCTAGAGCCTGTACCATTCTTCAGTTACCTAGCATaGGCTACACGGAATGAAAAATCTATTTTCTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: FLEPVPFFSYLA*ATRNEKSIFLI Trigger: GATTAAGAAAATAGATTTTTCATTCCGTGTAGCTCATGCTAGGTAACTGAAGAATGGTACAGGCTCTAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTGGAAATGAAGGCAGAGAATACCCAAATATATGGGACACAATGAAAGCACAATTGTGTCTGATATaGCATTTGTCTCTCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: FIGNEGREYPNIWDTMKAQLCLI*HLSLQM Trigger: CATCTGGAGAGACAAATGCAATATCAGACACAATTG...TGCTTTCATTGTGTCCCATATATTTGGGTATTCTCTGCCTTCATTTCCAATAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR CAA 72 bp | CCTTCTTTAAGGCATGGGGCCTCTCCCCTTGGCCTCTaGAGCCTACCAGTTCTTCAGGGCTTGGAACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLRHGASPLGL*SLPVLQGLEPC Trigger: ACAGGGTTCCAAGCCCTGAAGAACTGGTAGGCTCAAGAGGCCAAGGGGAGAGGCCCCATGCCTTAAAGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228802.2 |
||
| 3UTR CAA 72 bp | CCAGAAGATCTGAGAGACTTCCTGTGGATGAAGAACTaGAAAGGCCGGCCTATATTGACAAGGCAAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PEDLRDFLWMKN*KGRPILTRQRG Trigger: CCCTCTTTGCCTTGTCAATATAGGCCGGCCTTTCAAGTTCTTCATCCACAGGAAGTCTCTCAGATCTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGCAGCAAGCAGCTCTCAGCTCAAGGGGAGTTCTGTAGAGAAGCTTGGAAGAAAGGCAAGAATATaGTGTTTGAGTTTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRAASSSQLKGSSVEKLGRKARI*CLSFLH Trigger: GTGGAGAAAACTCAAACAGCATATTCTTGCCTTTCT...TCCAAGCTTCTCTACAGAACTCCCCTTGAGCTGAGAGCTGCTTGCTGCCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| CDS-3UTR TCA 90 bp | GCACGGCAAGGCAAAGCCATTTTGGTGTATATAGCATTAGATCATATAGACGTGCATCACGAAGAGCCATaGAAGAGAGAAACAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ARQGKAILVYIALDHIDVHHEEP*KRETAT Trigger: AGTGGCTGTTTCTCTCTTTCATGGCTCTTCGTGATG...CACGTCTATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGCCGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080253.5 ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CAA 72 bp | TCTATGTTTTGGGAACTTGTCAAGTCCACCTTGGACTaGATCTCTCTGGGAACTATCCTAGACCATTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SMFWELVKSTLD*ISLGTILDHWH Trigger: ATGCCAATGGTCTAGGATAGTTCCCAGAGAGATCAAGTCCAAGGTGGACTTGACAAGTTCCCAAAACATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR CAA 72 bp | ACTAACAGACTGGATATGCAAACAGGACCCAGCATTTaGCTGCATACAGGAAATGTACCTCAGTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TNRLDMQTGPSI*LHTGNVPQCQR Trigger: TCTTTGACACTGAGGTACATTTCCTGTATGCAGCAAAATGCTGGGTCCTGTTTGCATATCCAGTCTGTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CAA 72 bp | CAGAGCCTGTGTCTACAATTGTGTCTGATATTGCATTaGTCTCTCCAGATGTTGGGACTCCAAAACAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QSLCLQLCLILH*SLQMLGLQNRT Trigger: TGTTCTGTTTTGGAGTCCCAACATCTGGAGAGACAAATGCAATATCAGACACAATTGTAGACACAGGCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR CAA 72 bp | ACTAGTGTAGAAAGCAGCCAGAAGGAGCAGTCTGCCTaGAGAAACCTCTTAAAAACATTTCAGCATGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TSVESSQKEQSA*RNLLKTFQHAT Trigger: AGTTGCATGCTGAAATGTTTTTAAGAGGTTTCTCAAGGCAGACTGCTCCTTCTGGCTGCTTTCTACACTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| CDS-3UTR TCA 90 bp | AATGAGACTTTTCAAAGTCTTCATCTCCCAGAGTGCTTGGCAACATTCACTCTGCAAGAATATGCTGTTTaGGTTTTCTCCACAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NETFQSLHLPECLATFTLQEYAV*VFSTVW Trigger: CCACACTGTGGAGAAAACTCAAACAGCATATTCTTG...CAGAGTGAATGTTGCCAAGCACTCTGGGAGATGAAGACTTTGAAAAGTCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCAACACCATACACTCATCAATGGACAGATCATGGAAACACAGACTAAACCATCACGAAGAGCCATaGAAGAGAGAAACAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: EFNTIHSSMDRSWKHRLNHHEEP*KRETAT Trigger: AGTGGCTGTTTCTCTCTTTCATGGCTCTTCGTGATG...GTTTAGTCTGTGTTTCCATGATCTGTCCATTGATGAGTGTATGGTGTTGAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| CDS-3UTR GCA 90 bp | AGCACGGCAAGGCAAAGCCATTTTGGTGTATATAGCATTAGATCATATAGACGTTGGTCTAGAATTATTTaGAGACCTGGAGCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STARQSHFGVYSIRSYRRWSRII*RPGAVK Trigger: CTTCACAGCTCCAGGTCTGCAAATAATTCTAGACCA...ACGTCTATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGCCGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080253.5 ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTCATCCTGAGAACAATTTTCATCTCATGGGTCAGATGGTAGGTACCCATTGGTCTAGAATTATTTaGAGACCTGGAGCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSHPENNFHLMGQMVGTHWSRII*RPGAVK Trigger: CTTCACAGCTCCAGGTCTGCAAATAATTCTAGACCA...ATGGGTACCTACCATCTGACCCATGAGATGAAAATTGTTCTCAGGATGAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| CDS-3UTR CCA 90 bp | AGCACGGCAAGGCAAAGCCATTTTGGTGTATATAGCATTAGATCATATAGACGTCATCCCATGAGACTCTaGAAAATGACATCACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: STARQSHFGVYSIRSYRRHPMRL*KMTSRR Trigger: TCTTCGTGATGTCATTTTCCAGAGTCTCATGGGATG...ACGTCTATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGCCGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080253.5 ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCACGGCAAGGCAAAGCCATTTTGGTGTATATAGCATTAGATCATATAGACCAAGAATATGCTGTTTaGGTTTTCTCCACAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LARQGKAILVYIALDHIDQEYAV*VFSTVW Trigger: CCACACTGTGGAGAAAACTCAAACAGCATATTCTTG...GTCTATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGCCGTGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080253.5 ENSMUST00000228389.2 ENSMUST00000228802.2 |
||
| 3UTR CAA 72 bp | CAATTGTGTCTGATATTGCATTTGTCTCTCCAGATGTaGGGACTCCAAAACAGAACACGTCATCTCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLCLILHLSLQM*GLQNRTRHLTN Trigger: ATTTGTGAGATGACGTGTTCTGTTTTGGAGTCCCAACATCTGGAGAGACAAATGCAATATCAGACACAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| 3UTR CAA 72 bp | ATAGAGATTTTAGCAGAAATATTTAAACAAACATGCTaGGATCTGAAGGAGGGACTCCTATCCCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IEILAEIFKQTC*DLKEGLLSQLQ Trigger: CTGGAGCTGGGATAGGAGTCCCTCCTTCAGATCCAAGCATGTTTGTTTAAATATTTCTGCTAAAATCTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228389.2 |
||
| CDS-3UTR TCA 90 bp | ACATTAGCACGGCAAGGCAAAGCCATTTTGGTGTATATAGCATTAGATCATATACAAGAATATGCTGTTTaGGTTTTCTCCACAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TLARQGKAILVYIALDHIQEYAV*VFSTVW Trigger: CCACACTGTGGAGAAAACTCAAACAGCATATTCTTG...TATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGCCGTGCTAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080253.5 ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| CDS-3UTR CCA 90 bp | ACATTAGCACGGCAAGGCAAAGCCATTTTGGTGTATATAGCATTAGATCATATACATCCCATGAGACTCTaGAAAATGACATCACGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TLARQGKAILVYIALDHIHPMRL*KMTSRR Trigger: TCTTCGTGATGTCATTTTCCAGAGTCTCATGGGATG...TATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGCCGTGCTAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080253.5 ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| CDS-3UTR CCA 90 bp | AAAAGAGCATACACACAGTTTAACAGAACACCTGAACGCTCTAGAACAAAAAGACATCCCATGAGACTCTaGAAAATGACATCACGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KRAYTQFNRTPERSRTKRHPMRL*KMTSRR Trigger: TCTTCGTGATGTCATTTTCCAGAGTCTCATGGGATG...TCTTTTTGTTCTAGAGCGTTCAGGTGTTCTGTTAAACTGTGTGTATGCTCTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| CDS-3UTR GCA 90 bp | GCAAGGCAAAGCCATTTTGGTGTATATAGCATTAGATCATATAGACGTGATGTGAGAAAGGCAAGAATATaGTGTTTGAGTTTTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ARQSHFGVYSIRSYRRDVRKARI*CLSFLH Trigger: GTGGAGAAAACTCAAACAGCATATTCTTGCCTTTCT...CACATCACGTCTATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080253.5 ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR CAA 72 bp | TGTTATGATACATTAGCACGGCAAGGCAAAGCCATTTaGGTGTATATAGCATTAGATCATATAGACGTGATG | + |
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Preference number: 4 (lower is better) Translates to: CYDTLARQGKAI*VYIALDHIDVM Trigger: CATCACGTCTATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGCCGTGCTAATGTATCATAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| 3UTR CAA 72 bp | TTGTCTACTCACCTCAACTCTGATGGAACAATTTATTaGCACAGTTTTAAACCTAATGTGGGTGAACAGATG | + |
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Preference number: 4 (lower is better) Translates to: LSTHLNSDGTIY*HSFKPNVGEQM Trigger: CATCTGTTCACCCACATTAGGTTTAAAACTGTGCAAATAAATTGTTCCATCAGAGTTGAGGTGAGTAGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| CDS-3UTR GCA 90 bp | ACATTAGCACGGCAAGGCAAAGCCATTTTGGTGTATATAGCATTAGATCATATAAGAAAGGCAAGAATATaGTGTTTGAGTTTTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: TLARQGKAILVYIALDHIRKARI*CLSFLH Trigger: GTGGAGAAAACTCAAACAGCATATTCTTGCCTTTCT...TATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGCCGTGCTAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080253.5 ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| CDS-3UTR CAA 90 bp | CGGCAAGGCAAAGCCATTTTGGTGTATATAGCATTAGATCATATAGACGTGATGGCAAGAATATGCTGTTaGAGTTTTCTCCACAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: RQGKAILVYIALDHIDVMARICC*SFLHSV Trigger: CACACTGTGGAGAAAACTCAAACAGCATATTCTTGC...CATCACGTCTATATGATCTAATGCTATATACACCAAAATGGCTTTGCCTTGCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080253.5 ENSMUST00000228389.2 ENSMUST00000228802.2 |
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| CDS-3UTR CAA 90 bp | ATAAGTAGTGGAGTCAGTGATCATGAAAGGGCAGTAGAAGAAATACAAAGGCAGGCAAGAATATGCTGTTaGAGTTTTCTCCACAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: ISSGVSDHERAVEEIQRQARICC*SFLHSV Trigger: CACACTGTGGAGAAAACTCAAACAGCATATTCTTGC...CTGCCTTTGTATTTCTTCTACTGCCCTTTCATGATCACTGACTCCACTACTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228389.2 ENSMUST00000228802.2 |
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