Pregenerated sensors for VMN1R214 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061829Ensembl transcript IDs: ENSMUST00000074252.5, ENSMUST00000227236.2, ENSMUST00000227652.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAATGGCCTAGTCAGCCATCAGTGGAAAGAGAGGCCCATTCATCATaGAGACTTTATATGCCTCAATACAGGGGAATGACAGGGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: KWPSQPSVEREAHSS*RLYMPQYRGMTGPR Trigger: TCTTGGCCCTGTCATTCCCCTGTATTGAGGCATATAAAGTCTGCATGATGAATGGGCCTCTCTTTCCACTGATGGCTGACTAGGCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR GCA 90 bp | GCTTTAGCTCCTTGGGACCTAAAACTCTCTTACAGCCTGTACAGGTaGCTGTACAAATGTGGCATATACTCACACAGACAAATTAACTTA | + |
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Preference number: 1 (lower is better) Translates to: ALAPWDLKLSYSLYR*LYKCGIYSHRQINL Trigger: TAAGTTAATTTGTCTGTGTGAGTATATGCCACATTTGTACAGGCACCTGTACAGGCTGTAAGAGAGTTTTAGGTCCCAAGGAGCTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CCA 90 bp | TATCCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGATTaGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATTTG | + |
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Preference number: 1 (lower is better) Translates to: YPLISEYILCEFLCD*VTLLRMMPSRSIYL Trigger: CAAATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CCA 90 bp | GTCTCTTTAACTCCTTCCATGGGTGTTTTGTTCCCAATTTTAAGATaGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: VSLTPSMGVLFPILR*GKVSTLWSSFFLSF Trigger: GAAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAACAAAACACCCATGGAAGGAGTTAAAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR TCA 90 bp | CTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACAGACTaGTTTAGAATATGTTGGTTTGTCTGGTTCTTTATGTCAGACACT | + |
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Preference number: 1 (lower is better) Translates to: LYVLTSLPFESNYTD*FRICWFVWFFMSDT Trigger: AGTGTCTGACATAAAGAACCAGACAAACCAACATATTCTAAATCAGTCTGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGGAAAGAGAGGCCCATTCATCATGCAGACTTTATATGCCTCAATACAGGGACAGGGCCAAGAAGTaGAAGTGGGTGGGTGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SVEREAHSSCRLYMPQYRDRAKK*KWVGGG Trigger: TCCCCCACCCACCCACTTTCACTTCTTGGCCCTGTC...CCTGTATTGAGGCATATAAAGTCTGCATGATGAATGGGCCTCTCTTTCCACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTTGTGATTGGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATGCTATGGAGAGTCCTTaGGCATCAACAAAGGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: FLCDWVTLLRMMPSRSIYAMESP*ASTKGS Trigger: ACTGCCCTTTGTTGATGCCCAAGGACTCTCCATAGC...ATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTAGAATATGTTGGTTTGTCTGGTTCTTTATGTCAGACACTTAGACAAGGGGACAGGGCCAAGAAGTaGAAGTGGGTGGGTGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: DLEYVGLSGSLCQTLRQGDRAKK*KWVGGG Trigger: TCCCCCACCCACCCACTTTCACTTCTTGGCCCTGTC...CCCTTGTCTAAGTGTCTGACATAAAGAACCAGACAAACCAACATATTCTAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATGCCTTCTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACAAGAAGTGAAAGTGGGTaGGTGGGGGAGCGTGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SSCLLYVLTSLPFESNYTRSESG*VGERVG Trigger: CCCCACACGCTCCCCCACCCACCCACTTTCACTTCT...TGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAGAAGGCATGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTTGTGATTGGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATCTAGTCAGCCATCAGTaGAAAGAGAGGCCCATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: FLCDWVTLLRMMPSRSIYLVSHQ*KERPIH Trigger: ATGAATGGGCCTCTCTTTCCACTGATGGCTGACTAG...ATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAATTTTAAGATGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGGCTATGGAGAGTCCTTaGGCATCAACAAAGGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: FPILRWGKVSTLWSSFFLAMESP*ASTKGS Trigger: ACTGCCCTTTGTTGATGCCCAAGGACTCTCCATAGC...CAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTTGTGATTGGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATGTGCCTGTACAAATGTaGCATATACTCACACAGACA | + |
|
Preference number: 2 (lower is better) Translates to: FLCDWVTLLRMMPSRSIYVPVQM*HILTQT Trigger: TGTCTGTGTGAGTATATGCCACATTTGTACAGGCAC...ATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CAA 90 bp | GTCACAGCTCCAAACTTTGTCTCTTTAACTCCTTCCATGGGTGTTTaGTTCCCAATTTTAAGATGGGGCAAAGTGTCCACACTTTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: VTAPNFVSLTPSMGV*FPILRWGKVSTLWS Trigger: AGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAACAAAACACCCATGGAAGGAGTTAAAGAGACAAAGTTTGGAGCTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAATTTTAAGATGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGCTCAATACAGGGGAATaGCAGGGCCAAGAAGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FPILRWGKVSTLWSSFFLLNTGE*QGQEVK Trigger: TTTCACTTCTTGGCCCTGTCATTCCCCTGTATTGAG...CAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTGGAAAGAGAGGCCCATTCATCATGCAGACTTTATATGCCTCAATACAGGTTTTTCTTTTTGTGCTaGAGTGAGGGCTCAGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SVEREAHSSCRLYMPQYRFFFLC*SEGSAK Trigger: CTTAGCTGAGCCCTCACTCCAGCACAAAAAGAAAAA...CCTGTATTGAGGCATATAAAGTCTGCATGATGAATGGGCCTCTCTTTCCACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTTGTGATTGGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATGTGGCTAACAAGTCTTaGTCTGCTTCAGTCATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: FLCDWVTLLRMMPSRSIYVANKS*SASVIY Trigger: ATAAATGACTGAAGCAGACCAAGACTTGTTAGCCAC...ATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTTGTGATTGGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATTGGTCTCCTCTTGATTaGATGTACAGTACATATCAA | + |
|
Preference number: 2 (lower is better) Translates to: FLCDWVTLLRMMPSRSIYWSPLD*MYSTYQ Trigger: TTGATATGTACTGTACATTCAATCAAGAGGAGACCA...ATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTTGTGATTGGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATCAAGGAATCCTTCATTaGAATGAATGTAGAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FLCDWVTLLRMMPSRSIYQGILH*NECRVR Trigger: TCTGACTCTACATTCATTTCAATGAAGGATTCCTTG...ATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCATGCCTTCTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACATTACCTTACTCAGGATaGTGCCCTCCAGGTCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: SSCLLYVLTSLPFESNYTLPYSG*CPPGPS Trigger: AGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAA...TGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAGAAGGCATGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGGAAAGAGAGGCCCATTCATCATGCAGACTTTATATGCCTCAATACAGGGTTGAGAAAAACACATaGCTAAACTACTGTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SVEREAHSSCRLYMPQYRVEKNT*LNYCVG Trigger: TCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAAC...CCTGTATTGAGGCATATAAAGTCTGCATGATGAATGGGCCTCTCTTTCCACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCATGCCTTCTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACACTCAATACAGGGGAATaGCAGGGCCAAGAAGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SSCLLYVLTSLPFESNYTLNTGE*QGQEVK Trigger: TTTCACTTCTTGGCCCTGTCATTCCCCTGTATTGAG...TGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAGAAGGCATGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CAA 90 bp | TATCCTAAGTTTCTGGGCCAATATCCACTTATCAGTGAGTACATATaGTGTGAGTTCCTTTGTGATTGGGTTACCTTACTCAGGATGATG | + |
|
Preference number: 2 (lower is better) Translates to: YPKFLGQYPLISEYI*CEFLCDWVTLLRMM Trigger: CATCATCCTGAGTAAGGTAACCCAATCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTGGCCCAGAAACTTAGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAATTTTAAGATGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGGTTGAGAAAAACACATaGCTAAACTACTGTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: FPILRWGKVSTLWSSFFLVEKNT*LNYCVG Trigger: TCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAAC...CAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCATGCCTTCTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACACAGGCATTCACATGTTaGATAGTCATAAATGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSCLLYVLTSLPFESNYTQAFTC*IVINAG Trigger: GCCTGCATTTATGACTATGCAACATGTGAATGCCTG...TGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAGAAGGCATGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR GCA 90 bp | GATTTAGAATATGTTGGTTTGTCTGGTTCTTTATGTCAGACACTTAGACAAGGGCAGGCATTCACATGTTaGATAGTCATAAATGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: DLEYVGLSGSLCQTLRQGQAFTC*IVINAG Trigger: GCCTGCATTTATGACTATGCAACATGTGAATGCCTG...CCCTTGTCTAAGTGTCTGACATAAAGAACCAGACAAACCAACATATTCTAAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATGCCTTCTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACATTTTTCTTTTTGTGCTaGAGTGAGGGCTCAGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: SSCLLYVLTSLPFESNYTFFFLC*SEGSAK Trigger: CTTAGCTGAGCCCTCACTCCAGCACAAAAAGAAAAA...TGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAGAAGGCATGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATGCCTTCTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACAGTGCCTGTACAAATGTaGCATATACTCACACAGACA | + |
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Preference number: 2 (lower is better) Translates to: SSCLLYVLTSLPFESNYTVPVQM*HILTQT Trigger: TGTCTGTGTGAGTATATGCCACATTTGTACAGGCAC...TGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAGAAGGCATGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CAA 90 bp | GATTGGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATTaGCCTAGGAATTTCATAAATTCATTCTTTTTAATATCTGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: DWVTLLRMMPSRSIY*PRNFINSFFLISED Trigger: ATCCTCAGATATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATGCCTTCTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACATTCCCAATTTTAAGATaGGGCAAAGTGTCCACACTT | + |
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Preference number: 2 (lower is better) Translates to: SSCLLYVLTSLPFESNYTFPILR*GKVSTL Trigger: AAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAA...TGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAGAAGGCATGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTAGAATATGTTGGTTTGTCTGGTTCTTTATGTCAGACACTTAGACAAGGGCAAGGAATCCTTCATTaGAATGAATGTAGAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: DLEYVGLSGSLCQTLRQGQGILH*NECRVR Trigger: TCTGACTCTACATTCATTTCAATGAAGGATTCCTTG...CCCTTGTCTAAGTGTCTGACATAAAGAACCAGACAAACCAACATATTCTAAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATGCCTTCTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACAATATGTTGGTTTGTCTaGTTCTTTATGTCAGACACT | + |
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Preference number: 2 (lower is better) Translates to: SSCLLYVLTSLPFESNYTICWFV*FFMSDT Trigger: AGTGTCTGACATAAAGAACCAGACAAACCAACATAT...TGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAGAAGGCATGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR TCA 72 bp | CATCATGCAGACTTTATATGCCTCAATACAGGGGAATaGCAGGGCCAAGAAGTGAAAGTGGGTGGGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: HHADFICLNTGE*QGQEVKVGGWG Trigger: CCCCCACCCACCCACTTTCACTTCTTGGCCCTGTCATTCCCCTGTATTGAGGCATATAAAGTCTGCATGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCTTTGTGATTGGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATCCAGGCATTCACATGTaGCATAGTCATAAATGCAGG | + |
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Preference number: 3 (lower is better) Translates to: FLCDWVTLLRMMPSRSIYPGIHM*HSHKCR Trigger: CCTGCATTTATGACTATGCAACATGTGAATGCCTGG...ATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR TCA 72 bp | GTGAGTTCCTTTGTGATTGGGTTACCTTACTCAGGATaGTGCCCTCCAGGTCCATCTATTTGCCTAGGAATT | + |
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Preference number: 3 (lower is better) Translates to: VSSFVIGLPYSG*CPPGPSICLGI Trigger: AATTCCTAGGCAAATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR GCA 72 bp | CCTTGGGACCTAAAACTCTCTTACAGCCTGTACAGGTaGCTGTACAAATGTGGCATATACTCACACAGACAA | + |
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Preference number: 3 (lower is better) Translates to: PWDLKLSYSLYR*LYKCGIYSHRQ Trigger: TTGTCTGTGTGAGTATATGCCACATTTGTACAGGCACCTGTACAGGCTGTAAGAGAGTTTTAGGTCCCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR TCA 72 bp | GACAAGGGCTTTAATATAAGAGCCATAAGAATAACATaGGCCTCTAGATGGTCCATCCTTTCGTCACAGCTC | + |
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Preference number: 3 (lower is better) Translates to: DKGFNIRAIRIT*ASRWSILSSQL Trigger: GAGCTGTGACGAAAGGATGGACCATCTAGAGGCTCATGTTATTCTTATGGCTCTTATATTAAAGCCCTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CCA 72 bp | ACTCCTTCCATGGGTGTTTTGTTCCCAATTTTAAGATaGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTC | + |
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Preference number: 3 (lower is better) Translates to: TPSMGVLFPILR*GKVSTLWSSFF Trigger: GAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAACAAAACACCCATGGAAGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCCAATTTTAAGATGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGCCAGGCATTCACATGTaGCATAGTCATAAATGCAGG | + |
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Preference number: 3 (lower is better) Translates to: FPILRWGKVSTLWSSFFLPGIHM*HSHKCR Trigger: CCTGCATTTATGACTATGCAACATGTGAATGCCTGG...CAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR GCA 72 bp | TCTTCTAGCTTGAATATGCCCCAGGCATTCACATGTTaGATAGTCATAAATGCAGGCACACTATTCATACAG | + |
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Preference number: 3 (lower is better) Translates to: SSSLNMPQAFTC*IVINAGTLFIQ Trigger: CTGTATGAATAGTGTGCCTGCATTTATGACTATGCAACATGTGAATGCCTGGGGCATATTCAAGCTAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CCA 72 bp | CCAACGAAATGTTTCAGGTCATTTAAACTCTGTGACTaGTTCATTGGTCTCCTCTTGATTGAATGTACAGTA | + |
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Preference number: 3 (lower is better) Translates to: PTKCFRSFKLCD*FIGLLLIECTV Trigger: TACTGTACATTCAATCAAGAGGAGACCAATGAACCAGTCACAGAGTTTAAATGACCTGAAACATTTCGTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCATGCCTTCTCTATGTTCTCACATCACTTCCTTTTGAGTCAAATTACACAATCAGTGAGTACATATaGTGTGAGTTCCTTTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: SSCLLYVLTSLPFESNYTISEYI*CEFLCD Trigger: ATCACAAAGGAACTCACACAATATGTACTCACTGAT...TGTGTAATTTGACTCAAAAGGAAGTGATGTGAGAACATAGAGAAGGCATGAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR CCA 90 bp | TCAGTGGAAAGAGAGGCCCATTCATCATGCAGACTTTATATGCCTCAATACAGGGTGCCGTACAGACTTTaGCCTGAGCCTCCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: SVEREAHSSCRLYMPQYRVPYRL*PEPPPS Trigger: GGATGGAGGAGGCTCAGGCCAAAGTCTGTACGGCAC...CCTGTATTGAGGCATATAAAGTCTGCATGATGAATGGGCCTCTCTTTCCACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR TCA 90 bp | TTCCCAATTTTAAGATGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGGTACAGACTTTGGCCTaGGCCTCCTCCATCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: FPILRWGKVSTLWSSFFLVQTLA*ASSIQM Trigger: CATCTGGATGGAGGAGGCTCAGGCCAAAGTCTGTAC...CAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTTGTGATTGGGTTACCTTACTCAGGATGATGCCCTCCAGGTCCATCTATAAGAATGGAAGGATGTaGCGTACAGACTTTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: FLCDWVTLLRMMPSRSIYKNGRM*RTDFGL Trigger: CAGGCCAAAGTCTGTACGGCACATCCTTCCATTCTT...ATAGATGGACCTGGAGGGCATCATCCTGAGTAAGGTAACCCAATCACAAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CAA 72 bp | CATAGGACACTCATGACAGCTTGTAGCTTTAGCTCCTaGGGACCTAAAACTCTCTTACAGCCTGTACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: HRTLMTACSFSS*GPKTLLQPVQV Trigger: CACCTGTACAGGCTGTAAGAGAGTTTTAGGTCCCAAGGAGCTAAAGCTACAAGCTGTCATGAGTGTCCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR CCA 90 bp | CCAAGATTATTAGTTGAGAAAAACACATGCCTAAACTACTGTGTGGGATTTTGTGTGCCGTACAGACTTTaGCCTGAGCCTCCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: PRLLVEKNTCLNYCVGFCVPYRL*PEPPPS Trigger: GGATGGAGGAGGCTCAGGCCAAAGTCTGTACGGCAC...ACAAAATCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAACTAATAATCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR TCA 90 bp | CCAAGATTATTAGTTGAGAAAAACACATGCCTAAACTACTGTGTGGGATTTTGTGTACAGACTTTGGCCTaGGCCTCCTCCATCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: PRLLVEKNTCLNYCVGFCVQTLA*ASSIQM Trigger: CATCTGGATGGAGGAGGCTCAGGCCAAAGTCTGTAC...ACAAAATCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAACTAATAATCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR CCA 90 bp | TCAGTGGAAAGAGAGGCCCATTCATCATGCAGACTTTATATGCCTCAATACAGGAAAGAACAGGAAGAATaGAAGGATGTGCCGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: SVEREAHSSCRLYMPQYRKEQEE*KDVPYR Trigger: TCTGTACGGCACATCCTTCCATTCTTCCTGTTCTTT...CCTGTATTGAGGCATATAAAGTCTGCATGATGAATGGGCCTCTCTTTCCACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CAA 72 bp | CCAAACTTTGTCTCTTTAACTCCTTCCATGGGTGTTTaGTTCCCAATTTTAAGATGGGGCAAAGTGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: PNFVSLTPSMGV*FPILRWGKVST Trigger: TGTGGACACTTTGCCCCATCTTAAAATTGGGAACAAAACACCCATGGAAGGAGTTAAAGAGACAAAGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR GCA 90 bp | CCAAGATTATTAGTTGAGAAAAACACATGCCTAAACTACTGTGTGGGATTTTGTAAGAATGGAAGGATGTaGCGTACAGACTTTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PRLLVEKNTCLNYCVGFCKNGRM*RTDFGL Trigger: CAGGCCAAAGTCTGTACGGCACATCCTTCCATTCTT...ACAAAATCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAACTAATAATCTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR CCA 90 bp | TTGGTGATATCTTCTAGCTTGAATATGCCCCAGGCATTCACATGTTGCATAGTCTTTGTAAAAGCCAAGTaGATGAGAATAAGGTGTACG | + |
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Preference number: 4 (lower is better) Translates to: LVISSSLNMPQAFTCCIVFVKAK*MRIRCT Trigger: CGTACACCTTATTCTCATCCACTTGGCTTTTACAAA...GACTATGCAACATGTGAATGCCTGGGGCATATTCAAGCTAGAAGATATCACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CAA 72 bp | TTTCTGGGCCAATATCCACTTATCAGTGAGTACATATaGTGTGAGTTCCTTTGTGATTGGGTTACCTTACTC | + |
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Preference number: 4 (lower is better) Translates to: FLGQYPLISEYI*CEFLCDWVTLL Trigger: GAGTAAGGTAACCCAATCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTGGCCCAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR TCA 90 bp | TTCCCAATTTTAAGATGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGGGAGAACAATCCATTTaGTTTTCTGACTTGGTAACA | + |
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Preference number: 4 (lower is better) Translates to: FPILRWGKVSTLWSSFFLGEQSI*FSDLVT Trigger: TGTTACCAAGTCAGAAAATCAAATGGATTGTTCTCC...CAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR TCA 90 bp | CCAAGATTATTAGTTGAGAAAAACACATGCCTAAACTACTGTGTGGGATTTTGTACAGTGTTGCAGAACTaGGAGTTTCTTCTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PRLLVEKNTCLNYCVGFCTVLQN*EFLLPC Trigger: ACAAGGAAGAAGAAACTCTCAGTTCTGCAACACTGT...ACAAAATCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAACTAATAATCTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR GCA 90 bp | TTCCCAATTTTAAGATGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGGCTACAATAGTCTTTTaGAATCCTTTTGTAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPILRWGKVSTLWSSFFLATIVF*NPFVRR Trigger: CCTTCTTACAAAAGGATTGCAAAAGACTATTGTAGC...CAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCATCTTAAAATTGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR CCA 90 bp | CCAAGATTATTAGTTGAGAAAAACACATGCCTAAACTACTGTGTGGGATTTTGTAAAGAACAGGAAGAATaGAAGGATGTGCCGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRLLVEKNTCLNYCVGFCKEQEE*KDVPYR Trigger: TCTGTACGGCACATCCTTCCATTCTTCCTGTTCTTT...ACAAAATCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAACTAATAATCTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR CCA 90 bp | GATTTAGAATATGTTGGTTTGTCTGGTTCTTTATGTCAGACACTTAGACAAGGGTTTGTAAAAGCCAAGTaGATGAGAATAAGGTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: DLEYVGLSGSLCQTLRQGFVKAK*MRIRCT Trigger: CGTACACCTTATTCTCATCCACTTGGCTTTTACAAA...CCCTTGTCTAAGTGTCTGACATAAAGAACCAGACAAACCAACATATTCTAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR TCA 90 bp | CCAAGATTATTAGTTGAGAAAAACACATGCCTAAACTACTGTGTGGGATTTTGTGGAGAACAATCCATTTaGTTTTCTGACTTGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PRLLVEKNTCLNYCVGFCGEQSI*FSDLVT Trigger: TGTTACCAAGTCAGAAAATCAAATGGATTGTTCTCC...ACAAAATCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAACTAATAATCTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR CCA 90 bp | CCAAGATTATTAGTTGAGAAAAACACATGCCTAAACTACTGTGTGGGATTTTGTTTTGTAAAAGCCAAGTaGATGAGAATAAGGTGTACG | + |
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Preference number: 4 (lower is better) Translates to: PRLLVEKNTCLNYCVGFCFVKAK*MRIRCT Trigger: CGTACACCTTATTCTCATCCACTTGGCTTTTACAAA...ACAAAATCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAACTAATAATCTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CAA 72 bp | AGTCAAATTACACAGACTGATTTAGAATATGTTGGTTaGTCTGGTTCTTTATGTCAGACACTTAGACAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SQITQTDLEYVG*SGSLCQTLRQG Trigger: CCCTTGTCTAAGTGTCTGACATAAAGAACCAGACAAACCAACATATTCTAAATCAGTCTGTGTAATTTGACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| 3UTR CAA 72 bp | TCATTTAAACTCTGTGACTGGTTCATTGGTCTCCTCTaGATTGAATGTACAGTACATATCAATTTTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFKLCDWFIGLL*IECTVHINFSQ Trigger: CTGTGAAAAATTGATATGTACTGTACATTCAATCAAGAGGAGACCAATGAACCAGTCACAGAGTTTAAATGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS-3UTR GCA 90 bp | CCAAGATTATTAGTTGAGAAAAACACATGCCTAAACTACTGTGTGGGATTTTGTGCTACAATAGTCTTTTaGAATCCTTTTGTAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PRLLVEKNTCLNYCVGFCATIVF*NPFVRR Trigger: CCTTCTTACAAAAGGATTGCAAAAGACTATTGTAGC...ACAAAATCCCACACAGTAGTTTAGGCATGTGTTTTTCTCAACTAATAATCTTGG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS CCA 90 bp | CACTCTGGGCAGCTCTCAGCTCAGGGGGAGTTCTGTAGAGAAGCTTaGAGTTCTGAAGGTAGAGGACATGCTGGTGGTGCTTGTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: HSGQLSAQGEFCREA*SSEGRGHAGGACGE Trigger: TTCTCCACAAGCACCACCAGCATGTCCTCTACCTTCAGAACTCCAAGCTTCTCTACAGAACTCCCCCTGAGCTGAGAGCTGCCCAGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS GCA 90 bp | AAACAGAAGCCCATCCCTGTGAATCAGCACCAGGGGACTAAACGTTaGATAACCAAGGGTCAAAAGTTCTCGAGGATTTACTGTCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: KQKPIPVNQHQGTKR*ITKGQKFSRIYCQG Trigger: ACCTTGACAGTAAATCCTCGAGAACTTTTGACCCTTGGTTATGCAACGTTTAGTCCCCTGGTGCTGATTCACAGGGATGGGCTTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS CCA 90 bp | AAAGAAAGCATCAGTAATGCTAGACATGGGTCTGAGCACCACAGTTaGTATAATAGCATTTTCTTGTGTTCAAGAGGCAGTGGTAGACGC | + |
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Preference number: 5 (lower is better) Translates to: KESISNARHGSEHHS*YNSIFLCSRGSGRR Trigger: GCGTCTACCACTGCCTCTTGAACACAAGAAAATGCTATTATACCAACTGTGGTGCTCAGACCCATGTCTAGCATTACTGATGCTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS GCA 72 bp | TTGAGTATCCAAAAGAACAGGAAGAATGGAAGGATGTaGCGTACAGACTTTGGCCTGAGCCTCCTCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: LSIQKNRKNGRM*RTDFGLSLLHP Trigger: TGGATGGAGGAGGCTCAGGCCAAAGTCTGTACGGCACATCCTTCCATTCTTCCTGTTCTTTTGGATACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS GCA 72 bp | CCCATCCCTGTGAATCAGCACCAGGGGACTAAACGTTaGATAACCAAGGGTCAAAAGTTCTCGAGGATTTAC | + |
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Preference number: 6 (lower is better) Translates to: PIPVNQHQGTKR*ITKGQKFSRIY Trigger: GTAAATCCTCGAGAACTTTTGACCCTTGGTTATGCAACGTTTAGTCCCCTGGTGCTGATTCACAGGGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS CAA 90 bp | CTTGTACTTGTGATGGAATTGATTAGGTTCATACTTATTAATGCATaGAGTATCCAAAAGAACAGGAAGAATGGAAGGATGTGCCGTACA | + |
|
Preference number: 6 (lower is better) Translates to: LVLVMELIRFILINA*SIQKNRKNGRMCRT Trigger: TGTACGGCACATCCTTCCATTCTTCCTGTTCTTTTGGATACTCAATGCATTAATAAGTATGAACCTAATCAATTCCATCACAAGTACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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| CDS CAA 72 bp | GTGATGGAATTGATTAGGTTCATACTTATTAATGCATaGAGTATCCAAAAGAACAGGAAGAATGGAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: VMELIRFILINA*SIQKNRKNGRM Trigger: CATCCTTCCATTCTTCCTGTTCTTTTGGATACTCAATGCATTAATAAGTATGAACCTAATCAATTCCATCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074252.5 ENSMUST00000227236.2 ENSMUST00000227652.2 |
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