Pregenerated sensors for VMN1R213 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060024Ensembl transcript IDs: ENSMUST00000076897.2, ENSMUST00000227573.2, ENSMUST00000228031.2, ENSMUST00000228758.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCTAGCTGCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTaGAAAGAGAGGCCCATTGGTCGTGCAGACTTTATATGCCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SLAAYVSEDGLVGHQ*KERPIGRADFICLS Trigger: ACTGAGGCATATAAAGTCTGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCAGCTAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR TCA 90 bp | AGCCTCCAAACGTTGACACTATTGCATACACTAGCGGGATTTTGCTaGAAGGACCCTGATATAGCTGTCTCTTGTGAGACTATGCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: SLQTLTLLHTLAGFC*KDPDIAVSCETMPG Trigger: CCCCGGCATAGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCCCGCTAGTGTATGCAATAGTGTCAACGTTTGGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR GCA 90 bp | GTGCAAGTTTTAAGTCATCAAGATTATTGTTTGAGAATAAGCACATaGCTAAACTACTGTGTGGGATTTTGTCTTACCCACAATATTGCA | + |
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Preference number: 1 (lower is better) Translates to: VQVLSHQDYCLRIST*LNYCVGFCLTHNIA Trigger: TGCAATATTGTGGGTAAGACAAAATCCCACACAGTAGTTTAGGCATGTGCTTATTCTCAAACAATAATCTTGATGACTTAAAACTTGCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCATGGTTTCCTCAGTGCTaGAGAGATGACTCAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SEDGLVGHQWKERPIGRAWFPQC*RDDSAA Trigger: AGCAGCTGAGTCATCTCTTCAGCACTGAGGAAACCA...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCAGCTAAGAGCATTGGCTaGACCTCCCAATTTCAATTC | + |
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Preference number: 2 (lower is better) Translates to: SEDGLVGHQWKERPIGRAAKSIG*TSQFQF Trigger: GAATTGAAATTGGGAGGTCCAGCCAATGCTCTTAGC...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGTGGTTTCCTCAGTGCTaGAGAGATGACTCAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: WITGLPIKELERVPKELRWFPQC*RDDSAA Trigger: AGCAGCTGAGTCATCTCTTCAGCACTGAGGAAACCA...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR GCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGGCTTGTGTCTCTAGCTaGATATGTATCAGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: WITGLPIKELERVPKELRACVSS*ICIRGW Trigger: CCATCCTCTGATACATATGCAGCTAGAGACACAAGC...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATGCTAAGAGCATTGGCTaGACCTCCCAATTTCAATTC | + |
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Preference number: 2 (lower is better) Translates to: CICIRGWPCRPSVEREAHAKSIG*TSQFQF Trigger: GAATTGAAATTGGGAGGTCCAGCCAATGCTCTTAGC...ATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGACTTGTCGGCCATCAGTaGAAAGAGAGGCCCATTGGT | + |
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Preference number: 2 (lower is better) Translates to: SQSAIGWITGLPIKELERLVGHQ*KERPIG Trigger: ACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAG...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR TCA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGATGGTTTCCTCAGTGCTaGAGAGATGACTCAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SQSAIGWITGLPIKELERWFPQC*RDDSAA Trigger: AGCAGCTGAGTCATCTCTTCAGCACTGAGGAAACCA...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGGGATCTGCAACCCTATaGGTGGAACAACAATATGAA | + |
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Preference number: 2 (lower is better) Translates to: WITGLPIKELERVPKELRGSATL*VEQQYE Trigger: TTCATATTGTTGTTCCACCCATAGGGTTGCAGATCC...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR GCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGTTGAGAATAAGCACATaGCTAAACTACTGTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: WITGLPIKELERVPKELRLRIST*LNYCVG Trigger: TCCCACACAGTAGTTTAGGCATGTGCTTATTCTCAA...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGCAGTTAGACATGCGGTaGTTAATGATCTCTTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: WITGLPIKELERVPKELRQLDMR*LMISSN Trigger: ATTGGAAGAGATCATTAACCACCGCATGTCTAACTG...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATCAGTTAGACATGCGGTaGTTAATGATCTCTTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: CICIRGWPCRPSVEREAHQLDMR*LMISSN Trigger: ATTGGAAGAGATCATTAACCACCGCATGTCTAACTG...ATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR GCA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGATTGAGAATAAGCACATaGCTAAACTACTGTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SQSAIGWITGLPIKELERLRIST*LNYCVG Trigger: TCCCACACAGTAGTTTAGGCATGTGCTTATTCTCAA...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR CAA 90 bp | CTCCCAATTTCAATTCACAGCAATAACACATTAATTCAGAACAATTaGTCAAATCCAGTTAGACATGCGGTGGTTAATGATCTCTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LPISIHSNNTLIQNN*SNPVRHAVVNDLFQ Trigger: TTGGAAGAGATCATTAACCACCGCATGTCTAACTGGATTTGACAAATTGTTCTGAATTAATGTGTTATTGCTGTGAATTGAAATTGGGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR GCA 72 bp | GACTCAGGAGGAACGAAGACCAGGGTGTGGATGCCTTaGCCCTTCTTAGAATTGGGAGTGGAACGCCCATGG | + |
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Preference number: 3 (lower is better) Translates to: DSGGTKTRVWMP*PFLELGVERPW Trigger: CCATGGGCGTTCCACTCCCAATTCTAAGAAGGGGCAAGGCATCCACACCCTGGTCTTCGTTCCTCCTGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCACAGCTGCTAAGAGCATaGGCTGGACCTCCCAATTTC | + |
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Preference number: 3 (lower is better) Translates to: SEDGLVGHQWKERPIGRAQLLRA*AGPPNF Trigger: GAAATTGGGAGGTCCAGCCAATGCTCTTAGCAGCTG...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR CCA 72 bp | GGAGCTTGTGTCTCTAGCTGCATATGTATCAGAGGATaGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GACVSSCICIRG*PCRPSVEREAH Trigger: ATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCAGCTAGAGACACAAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATCAGCTGCTAAGAGCATaGGCTGGACCTCCCAATTTC | + |
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Preference number: 3 (lower is better) Translates to: CICIRGWPCRPSVEREAHQLLRA*AGPPNF Trigger: GAAATTGGGAGGTCCAGCCAATGCTCTTAGCAGCTG...ATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CAA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGCAGCTGCTAAGAGCATaGGCTGGACCTCCCAATTTC | + |
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Preference number: 3 (lower is better) Translates to: WITGLPIKELERVPKELRQLLRA*AGPPNF Trigger: GAAATTGGGAGGTCCAGCCAATGCTCTTAGCAGCTG...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR CCA 72 bp | GCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTaGAAAGAGAGGCCCATTGGTCGTGCAGACTTTATA | + |
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Preference number: 3 (lower is better) Translates to: AYVSEDGLVGHQ*KERPIGRADFI Trigger: TATAAAGTCTGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CAA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGCTACTGTGTGGGATTTaGTCTTACCCACAATATTGC | + |
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Preference number: 3 (lower is better) Translates to: WITGLPIKELERVPKELRLLCGI*SYPQYC Trigger: GCAATATTGTGGGTAAGACAAAATCCCACACAGTAG...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATCTACTGTGTGGGATTTaGTCTTACCCACAATATTGC | + |
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Preference number: 3 (lower is better) Translates to: CICIRGWPCRPSVEREAHLLCGI*SYPQYC Trigger: GCAATATTGTGGGTAAGACAAAATCCCACACAGTAG...ATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR-3UTR CAA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGGAAAGAGAGGCCCATaGGTCGTGCAGACTTTATAT | + |
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Preference number: 3 (lower is better) Translates to: SQSAIGWITGLPIKELERGKRGP*VVQTLY Trigger: ATATAAAGTCTGCACGACCAATGGGCCTCTCTTTCC...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR TCA 72 bp | GATACCCAAGATATGGGATACAATTTTCGAAGCACATaGGACTCAGGAGGAACGAAGACCAGGGTGTGGATG | + |
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Preference number: 3 (lower is better) Translates to: DTQDMGYNFRST*DSGGTKTRVWM Trigger: CATCCACACCCTGGTCTTCGTTCCTCCTGAGTCTCATGTGCTTCGAAAATTGTATCCCATATCTTGGGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR TCA 72 bp | ACGTTGACACTATTGCATACACTAGCGGGATTTTGCTaGAAGGACCCTGATATAGCTGTCTCTTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: TLTLLHTLAGFC*KDPDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCCCGCTAGTGTATGCAATAGTGTCAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR GCA 72 bp | TTAAGTCATCAAGATTATTGTTTGAGAATAAGCACATaGCTAAACTACTGTGTGGGATTTTGTCTTACCCAC | + |
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Preference number: 3 (lower is better) Translates to: LSHQDYCLRIST*LNYCVGFCLTH Trigger: GTGGGTAAGACAAAATCCCACACAGTAGTTTAGGCATGTGCTTATTCTCAAACAATAATCTTGATGACTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR GCA 72 bp | AGTGTATGGATCCAATTTAAGAAATTAAGTGGCGAATaGCTCTTTGAAATGAATGTAGAGTCAGGTCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SVWIQFKKLSGE*LFEMNVESGPF Trigger: AAAAGGACCTGACTCTACATTCATTTCAAAGAGGCATTCGCCACTTAATTTCTTAAATTGGATCCATACACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR TCA 72 bp | CCAATGAAAATGCTCAGGGCATTTAAGTTCTATGACTaGTGCATTTGGTTTCTATTGATTGAATTCATGGTA | + |
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Preference number: 3 (lower is better) Translates to: PMKMLRAFKFYD*CIWFLLIEFMV Trigger: TACCATGAATTCAATCAATAGAAACCAAATGCATCAGTCATAGAACTTAAATGCCCTGAGCATTTTCATTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR CCA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCATCAGACTGGACTCAGTaGGTCCCTCAACCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SEDGLVGHQWKERPIGRASDWTQ*VPQPSG Trigger: CCCTGAGGGTTGAGGGACCCACTGAGTCCAGTCTGA...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228758.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCACCTCCCATGGCACCCTaGAACACTGCATCTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: SEDGLVGHQWKERPIGRAPPMAP*NTASLT Trigger: TGTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR CAA 72 bp | ATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATaGGTCGTGCAGACTTTATATGCCTCAGTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: MALSAISGKRGP*VVQTLYASVQG Trigger: CCCCTGCACTGAGGCATATAAAGTCTGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR CAA 72 bp | AGACTCAGGAGGAACGAAGACCAGGGTGTGGATGCCTaGCCCCTTCTTAGAATTGGGAGTGGAACGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: RLRRNEDQGVDA*PLLRIGSGTPM Trigger: CATGGGCGTTCCACTCCCAATTCTAAGAAGGGGCAAGGCATCCACACCCTGGTCTTCGTTCCTCCTGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCAAGAAGCCCATCCCTGTaGATTAGCACAAAGGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: SEDGLVGHQWKERPIGRARSPSL*ISTKGL Trigger: TAGCCCCTTTGTGCTAATTCACAGGGATGGGCTTCT...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCAAGGACATGCTGGTGGTaGTTGTGGAGAAGAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: SEDGLVGHQWKERPIGRARTCWW*LWRRNA Trigger: GGCATTTCTTCTCCACAAGCACCACCAGCATGTCCT...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR TCA 90 bp | TGCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATCCTCCCATGGCACCCTaGAACACTGCATCTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: CICIRGWPCRPSVEREAHPPMAP*NTASLT Trigger: TGTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...ATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR TCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGATGCAGACTTTAGCCTaGGCCTCCTCCATCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: WITGLPIKELERVPKELRMQTLA*ASSIQM Trigger: CATCTGGATGGAGGAGGCTCAGGCTAAAGTCTGCAT...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGCAAGAGGCAGTGTTGTaGCTCAGACTGGACTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: WITGLPIKELERVPKELRQEAVL*LRLDSV Trigger: CACTGAGTCCAGTCTGAGGCACAACACTGCCTCTTG...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228758.2 |
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| CDS-3UTR CCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGTGTTGTGCCTCAGACTaGACTCAGTGGGTCCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: WITGLPIKELERVPKELRCCASD*TQWVPQ Trigger: TTGAGGGACCCACTGAGTCCAGTCTGAGGCACAACA...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228758.2 |
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| CDS-3UTR TCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGAGAAGCCCATCCCTGTaGATTAGCACAAAGGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: WITGLPIKELERVPKELRRSPSL*ISTKGL Trigger: TAGCCCCTTTGTGCTAATTCACAGGGATGGGCTTCT...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR TCA 90 bp | TGCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATAGAAGCCCATCCCTGTaGATTAGCACAAAGGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: CICIRGWPCRPSVEREAHRSPSL*ISTKGL Trigger: TAGCCCCTTTGTGCTAATTCACAGGGATGGGCTTCT...ATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGGGCACCCTGAAACACTaGATCTCTCACAACCATGAG | + |
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Preference number: 4 (lower is better) Translates to: WITGLPIKELERVPKELRGTLKH*ISHNHE Trigger: CTCATGGTTGTGAGAGATGCAGTGTTTCAGGGTGCC...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGAGGACATGCTGGTGGTaGTTGTGGAGAAGAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: WITGLPIKELERVPKELRRTCWW*LWRRNA Trigger: GGCATTTCTTCTCCACAAGCACCACCAGCATGTCCT...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCATCTCAAACCAAAAGCTaGTATTGTCTTAGGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: SEDGLVGHQWKERPIGRASQTKS*YCLRQS Trigger: GGATTGCCTAAGACAATAGCAGCTTTTGGTTTGAGA...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR CCA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCATTCTGTAGAGAAGCTTaGAGTTCTGAAAGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SEDGLVGHQWKERPIGRAFCREA*SSESRG Trigger: TCCTCTACTTTCAGAACTCCAAGCTTCTCTACAGAA...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR TCA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAATGCAGACTTTAGCCTaGGCCTCCTCCATCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: SQSAIGWITGLPIKELERMQTLA*ASSIQM Trigger: CATCTGGATGGAGGAGGCTCAGGCTAAAGTCTGCAT...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR TCA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAAAGGAGTCAGTGGGGTaGCAAACAGACACATACACC | + |
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Preference number: 4 (lower is better) Translates to: SQSAIGWITGLPIKELERKESVG*QTDTYT Trigger: GGTGTATGTGTCTGTTTGTCACCCCACTGACTCCTT...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGGCACCCTGAAACACTaGATCTCTCACAACCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SQSAIGWITGLPIKELERGTLKH*ISHNHE Trigger: CTCATGGTTGTGAGAGATGCAGTGTTTCAGGGTGCC...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAAGGACATGCTGGTGGTaGTTGTGGAGAAGAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: SQSAIGWITGLPIKELERRTCWW*LWRRNA Trigger: GGCATTTCTTCTCCACAAGCACCACCAGCATGTCCT...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGTCTCAAACCAAAAGCTaGTATTGTCTTAGGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: WITGLPIKELERVPKELRSQTKS*YCLRQS Trigger: GGATTGCCTAAGACAATAGCAGCTTTTGGTTTGAGA...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGAAAGGGGCTAAAAGTTaGATAACCAAGGGTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: WITGLPIKELERVPKELRKGAKS*ITKGQK Trigger: TTTCTGACCCTTGGTTATGCAACTTTTAGCCCCTTT...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR CCA 90 bp | TGCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTTCTGTAGAGAAGCTTaGAGTTCTGAAAGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: CICIRGWPCRPSVEREAHFCREA*SSESRG Trigger: TCCTCTACTTTCAGAACTCCAAGCTTCTCTACAGAA...ATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGGACATGGATCTGAACTaGACATTTTGCATAATAGTA | + |
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Preference number: 4 (lower is better) Translates to: WITGLPIKELERVPKELRDMDLN*TFCIIV Trigger: TACTATTATGCAAAATGTGCAGTTCAGATCCATGTC...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGATCTCAAACCAAAAGCTaGTATTGTCTTAGGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: SQSAIGWITGLPIKELERSQTKS*YCLRQS Trigger: GGATTGCCTAAGACAATAGCAGCTTTTGGTTTGAGA...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR GCA 90 bp | TCACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAAAAGGGGCTAAAAGTTaGATAACCAAGGGTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SQSAIGWITGLPIKELERKGAKS*ITKGQK Trigger: TTTCTGACCCTTGGTTATGCAACTTTTAGCCCCTTT...TCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCATCCAATAGCTGACTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| 3UTR CAA 72 bp | CACTCAGTGCAAGTTTTAAGTCATCAAGATTATTGTTaGAGAATAAGCACATGCCTAAACTACTGTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: HSVQVLSHQDYC*RISTCLNYCVG Trigger: TCCCACACAGTAGTTTAGGCATGTGCTTATTCTCAAACAATAATCTTGATGACTTAAAACTTGCACTGAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR CAA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCAGTGCAAGAGGCAGTGTaGTGCCTCAGACTGGACTCA | + |
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Preference number: 5 (lower is better) Translates to: SEDGLVGHQWKERPIGRAVQEAV*CLRLDS Trigger: TGAGTCCAGTCTGAGGCACAACACTGCCTCTTGCAC...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228758.2 |
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| CDS-3UTR CAA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCACAGAAGGAGGACACTTaGAGCAGCTCTCAGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SEDGLVGHQWKERPIGRAQKEDT*SSSQLR Trigger: CCTGAGCTGAGAGCTGCTCAAAGTGTCCTCCTTCTG...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS CCA 90 bp | TTTTCAGTGTGCAAGAGGCAGTGTTGTGCCTCAGACTGGACTCAGTaGGTCCCTCAACCCTCAGGGAATCAGGGTCCCAGTATTCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: FSVCKRQCCASDWTQ*VPQPSGNQGPSIQV Trigger: TACCTGAATACTGGGACCCTGATTCCCTGAGGGTTGAGGGACCCACTGAGTCCAGTCTGAGGCACAACACTGCCTCTTGCACACTGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076897.2 ENSMUST00000228758.2 |
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| CDS CCA 90 bp | CACTTTGAGCAGCTCTCAGCTCAGGGGGAGTTCTGTAGAGAAGCTTaGAGTTCTGAAAGTAGAGGACATGCTGGTGGTGCTTGTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: HFEQLSAQGEFCREA*SSESRGHAGGACGE Trigger: TTCTCCACAAGCACCACCAGCATGTCCTCTACTTTCAGAACTCCAAGCTTCTCTACAGAACTCCCCCTGAGCTGAGAGCTGCTCAAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000076897.2 ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR CAA 90 bp | TCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCATTTACCATCAAGATATaGACCTCTGAAGAGAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: SEDGLVGHQWKERPIGRAFTIKI*TSEERV Trigger: AACTCTCTCTTCAGAGGTCAATATCTTGATGGTAAA...TGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS GCA 90 bp | ACATTTTGCATAATAGTATTTTTCAGTGTGCAAGAGGCAGTGTTGTaGCTCAGACTGGACTCAGTGGGTCCCTCAACCCTCAGGGAATCA | + |
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Preference number: 5 (lower is better) Translates to: TFCIIVFFSVQEAVL*LRLDSVGPSTLRES Trigger: TGATTCCCTGAGGGTTGAGGGACCCACTGAGTCCAGTCTGAGGCACAACACTGCCTCTTGCACACTGAAAAATACTATTATGCAAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076897.2 ENSMUST00000228758.2 |
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| CDS-3UTR CAA 90 bp | TGCATATGTATCAGAGGATGGCCTTGTCGGCCATCAGTGGAAAGAGAGGCCCATTTTACCATCAAGATATaGACCTCTGAAGAGAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: CICIRGWPCRPSVEREAHFTIKI*TSEERV Trigger: AACTCTCTCTTCAGAGGTCAATATCTTGATGGTAAA...ATGGGCCTCTCTTTCCACTGATGGCCGACAAGGCCATCCTCTGATACATATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS-3UTR CAA 90 bp | TGGATCACAGGGCTCCCAATAAAAGAGCTAGAGAGAGTACCCAAGGAGCTGAGGTTTACCATCAAGATATaGACCTCTGAAGAGAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: WITGLPIKELERVPKELRFTIKI*TSEERV Trigger: AACTCTCTCTTCAGAGGTCAATATCTTGATGGTAAA...CCTCAGCTCCTTGGGTACTCTCTCTAGCTCTTTTATTGGGAGCCCTGTGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS GCA 90 bp | AAGAAAGCATCAGTAATGCTAGACATGGATCTGAACTGCACATTTTaGATAATAGTATTTTTCAGTGTGCAAGAGGCAGTGTTGTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: KKASVMLDMDLNCTF*IIVFFSVQEAVLCL Trigger: GAGGCACAACACTGCCTCTTGCACACTGAAAAATACTATTATGCAAAATGTGCAGTTCAGATCCATGTCTAGCATTACTGATGCTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076897.2 ENSMUST00000228758.2 |
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| CDS CCA 72 bp | TGCAAGAGGCAGTGTTGTGCCTCAGACTGGACTCAGTaGGTCCCTCAACCCTCAGGGAATCAGGGTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: CKRQCCASDWTQ*VPQPSGNQGPS Trigger: ACTGGGACCCTGATTCCCTGAGGGTTGAGGGACCCACTGAGTCCAGTCTGAGGCACAACACTGCCTCTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076897.2 ENSMUST00000228758.2 |
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| CDS CCA 72 bp | TTTTCAGTGTGCAAGAGGCAGTGTTGTGCCTCAGACTaGACTCAGTGGGTCCCTCAACCCTCAGGGAATCAG | + |
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Preference number: 6 (lower is better) Translates to: FSVCKRQCCASD*TQWVPQPSGNQ Trigger: CTGATTCCCTGAGGGTTGAGGGACCCACTGAGTCCAGTCTGAGGCACAACACTGCCTCTTGCACACTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076897.2 ENSMUST00000228758.2 |
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| CDS GCA 72 bp | ATAACCACTGGCCCCTCCCATGGCACCCTGAAACACTaGATCTCTCACAACCATGAGAGGGAGAACAATCCA | + |
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Preference number: 6 (lower is better) Translates to: ITTGPSHGTLKH*ISHNHERENNP Trigger: TGGATTGTTCTCCCTCTCATGGTTGTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076897.2 ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS CCA 72 bp | CAGCTCTCAGCTCAGGGGGAGTTCTGTAGAGAAGCTTaGAGTTCTGAAAGTAGAGGACATGCTGGTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QLSAQGEFCREA*SSESRGHAGGA Trigger: AGCACCACCAGCATGTCCTCTACTTTCAGAACTCCAAGCTTCTCTACAGAACTCCCCCTGAGCTGAGAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000076897.2 ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS GCA 72 bp | ATAATAGTATTTTTCAGTGTGCAAGAGGCAGTGTTGTaGCTCAGACTGGACTCAGTGGGTCCCTCAACCCTC | + |
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Preference number: 6 (lower is better) Translates to: IIVFFSVQEAVL*LRLDSVGPSTL Trigger: GAGGGTTGAGGGACCCACTGAGTCCAGTCTGAGGCACAACACTGCCTCTTGCACACTGAAAAATACTATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076897.2 ENSMUST00000228758.2 |
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| CDS CAA 72 bp | TGCATAATAGTATTTTTCAGTGTGCAAGAGGCAGTGTaGTGCCTCAGACTGGACTCAGTGGGTCCCTCAACC | + |
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Preference number: 6 (lower is better) Translates to: CIIVFFSVQEAV*CLRLDSVGPST Trigger: GGTTGAGGGACCCACTGAGTCCAGTCTGAGGCACAACACTGCCTCTTGCACACTGAAAAATACTATTATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076897.2 ENSMUST00000228758.2 |
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| CDS CAA 90 bp | AAAGAAAGCATCAGTAATGCTAGACATGGATCTGAACTGCACATTTaGCATAATAGTATTTTTCAGTGTGCAAGAGGCAGTGTTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KESISNARHGSELHI*HNSIFQCARGSVVP Trigger: AGGCACAACACTGCCTCTTGCACACTGAAAAATACTATTATGCAAAATGTGCAGTTCAGATCCATGTCTAGCATTACTGATGCTTTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076897.2 ENSMUST00000228758.2 |
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| CDS TCA 72 bp | GGGTCAGAAAATCTCGAGTATTTACCATCAAGATATTaGCCTCTGAAGAGAGAGTTAGAAACAGAGAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GSENLEYLPSRY*PLKRELETEKR Trigger: CCTTTTCTCTGTTTCTAACTCTCTCTTCAGAGGTCAATATCTTGATGGTAAATACTCGAGATTTTCTGACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000076897.2 ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS CAA 72 bp | AGGGTCAGAAAATCTCGAGTATTTACCATCAAGATATaGACCTCTGAAGAGAGAGTTAGAAACAGAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: RVRKSRVFTIKI*TSEERVRNREK Trigger: CTTTTCTCTGTTTCTAACTCTCTCTTCAGAGGTCAATATCTTGATGGTAAATACTCGAGATTTTCTGACCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000076897.2 ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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| CDS CAA 90 bp | CTTGTATTTGTGGTAGAATGGATTAGGTTCACACTTATCAAAGCATaGAGTATCCAAAAGAATAGGAAGAATAAAAGGATGTGCCATGCA | + |
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Preference number: 6 (lower is better) Translates to: LVFVVEWIRFTLIKA*SIQKNRKNKRMCHA Trigger: TGCATGGCACATCCTTTTATTCTTCCTATTCTTTTGGATACTCAATGCTTTGATAAGTGTGAACCTAATCCATTCTACCACAAATACAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000076897.2 ENSMUST00000227573.2 ENSMUST00000228031.2 ENSMUST00000228758.2 |
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