Pregenerated sensors for VMN1R211 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063998Ensembl transcript IDs: ENSMUST00000073728.5, ENSMUST00000228645.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCTCTGCGTTCAAGGCCAGTTTGGGACAGAACAAACCCAGGCTTaGTGTTACATACCTTCAATCAAGGCCTCGCCTTCTGTGGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: ALCVQGQFGTEQTQA*CYIPSIKASPSVEA Trigger: GGCCTCCACAGAAGGCGAGGCCTTGATTGAAGGTATGTAACACCAAGCCTGGGTTTGTTCTGTCCCAAACTGGCCTTGAACGCAGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR TCA 90 bp | CTAGCTTGCTCACTCTTGAGTGCTCAGGTGCCTTTCTTATATAGCTaGGGTCCACCTGCAAAAGGCACCACCCACATTGGGATGGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: LACSLLSAQVPFLYS*GPPAKGTTHIGMGS Trigger: GGAACCCATCCCAATGTGGGTGGTGCCTTTTGCAGGTGGACCTCAGCTATATAAGAAAGGCACCTGAGCACTCAAGAGTGAGCAAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR GCA 90 bp | AGGCTTTTAATCTCAAAAGACAGAAGCAAGCAGATCTCTGCTCTCTaGGTTCAAGGCCAGTTTGGGACAGAACAAACCCAGGCTTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: RLLISKDRSKQISAL*VQGQFGTEQTQAWC Trigger: ACACCAAGCCTGGGTTTGTTCTGTCCCAAACTGGCCTTGAACGCAGAGAGCAGAGATCTGCTTGCTTCTGTCTTTTGAGATTAAAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR GCA 90 bp | GTAGTACAGGCTTTTAATCTCAAAAGACAGAAGCAAGCAGATCTCTaGTCTCTGCGTTCAAGGCCAGTTTGGGACAGAACAAACCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: VVQAFNLKRQKQADL*SLRSRPVWDRTNPG Trigger: GCCTGGGTTTGTTCTGTCCCAAACTGGCCTTGAACGCAGAGAGCAGAGATCTGCTTGCTTCTGTCTTTTGAGATTAAAAGCCTGTACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR CCA 90 bp | ACAGGCAAACCATTGCAAAGTCCCCCTCAGTACTTGTGTTTGACTTaGAACTATGTTCTAATGCTTAGTGTTTCCTGTGTCTGCCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: TGKPLQSPPQYLCLT*NYVLMLSVSCVCLL Trigger: TAGGAGGCAGACACAGGAAACACTAAGCATTAGAACATAGTTCCAAGTCAAACACAAGTACTGAGGGGGACTTTGCAATGGTTTGCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR GCA 90 bp | TGTTTGACTTGGAACTATGTTCTAATGCTTAGTGTTTCCTGTGTCTaGCTCCTAGCTCCTACAATACTTGGTGTGCAACAAAGCCACTCA | + |
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Preference number: 1 (lower is better) Translates to: CLTWNYVLMLSVSCV*LLAPTILGVQQSHS Trigger: TGAGTGGCTTTGTTGCACACCAAGTATTGTAGGAGCTAGGAGGCAGACACAGGAAACACTAAGCATTAGAACATAGTTCCAAGTCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR GCA 90 bp | TGCCTCCTAGCTCCTACAATACTTGGTGTGCAACAAAGCCACTCATaGATCCCTCTCTTTCTACTATATAATATTACTCCTAGTGCAATT | + |
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Preference number: 1 (lower is better) Translates to: CLLAPTILGVQQSHS*IPLFLLYNITPSAI Trigger: AATTGCACTAGGAGTAATATTATATAGTAGAAAGAGAGGGATGCATGAGTGGCTTTGTTGCACACCAAGTATTGTAGGAGCTAGGAGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR TCA 90 bp | CATCTTGAATGTATACCCTCATATGGTCTTGCACACTGGAAGAAATaGGTTCTCTTTCCTCTTACTCTACCTAAAGATCCTGCAGTCATT | + |
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Preference number: 1 (lower is better) Translates to: HLECIPSYGLAHWKK*VLFPLTLPKDPAVI Trigger: AATGACTGCAGGATCTTTAGGTAGAGTAAGAGGAAAGAGAACTCATTTCTTCCAGTGTGCAAGACCATATGAGGGTATACATTCAAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR TCA 90 bp | GATAACTATATACTGCCTCTAACATATATTGATTGTGTGCTGCCATaGCTCCCTCTGCTACCAGAAGTGATGATCATGAATGATCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: DNYILPLTYIDCVLP*LPLLPEVMIMNDLF Trigger: AAAAAGATCATTCATGATCATCACTTCTGGTAGCAGAGGGAGTCATGGCAGCACACAATCAATATATGTTAGAGGCAGTATATAGTTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR TCA 90 bp | TCATTCATGCTTAGAATTCAGTTAGCTTTCAGACACAGATCATCTTaGATGTATACCCTCATATGGTCTTGCACACTGGAAGAAATGAGT | + |
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Preference number: 1 (lower is better) Translates to: SFMLRIQLAFRHRSS*MYTLIWSCTLEEMS Trigger: ACTCATTTCTTCCAGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCTAACTGAATTCTAAGCATGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR TCA 90 bp | TACCAGCTATTTCATGAAGTATGGCAAGATGGAGAAACAGAGAGTTaGAGCTTTGTATTTTCCTCAGCTTCATTATTAGATAAGCACTGT | + |
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Preference number: 1 (lower is better) Translates to: YQLFHEVWQDGETES*SFVFSSASLLDKHC Trigger: ACAGTGCTTATCTAATAATGAAGCTGAGGAAAATACAAAGCTTCAACTCTCTGTTTCTCCATCTTGCCATACTTCATGAAATAGCTGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR CAA 90 bp | GATGCCATTAGAGATGGCTGTGAGCCACCATGTGGTTTCTGGGAATaGAACTCAGGCCCTTTGGAGGAGCCATCTGTCCAGAGCCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: DAIRDGCEPPCGFWE*NSGPLEEPSVQSLL Trigger: TAGGAGGCTCTGGACAGATGGCTCCTCCAAAGGGCCTGAGTTCAATTCCCAGAAACCACATGGTGGCTCACAGCCATCTCTAATGGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR CAA 90 bp | TGCTCTCTGCGTTCAAGGCCAGTTTGGGACAGAACAAACCCAGGCTaGGTGTTACATACCTTCAATCAAGGCCTCGCCTTCTGTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: CSLRSRPVWDRTNPG*VLHTFNQGLAFCGG Trigger: GCCTCCACAGAAGGCGAGGCCTTGATTGAAGGTATGTAACACCAAGCCTGGGTTTGTTCTGTCCCAAACTGGCCTTGAACGCAGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGTTACAGCCCATCACTGAGGGAAACTAGACAGGATCTCACGCAGGAGAAGGTTCCCAGATGGCTCTaGGTTGTGTCAAGTTTACAG | + |
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Preference number: 2 (lower is better) Translates to: ESYSPSLRETRQDLTQEKVPRWL*VVSSLQ Trigger: CTGTAAACTTGACACAACTCAGAGCCATCTGGGAAC...CTTCTCCTGCGTGAGATCCTGTCTAGTTTCCCTCAGTGATGGGCTGTAACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR GCA 90 bp | GGTAACCTGCTTTCTGTGATTGTGATCAACACCATCTTGGGGAAGAAAGTGTTAAGCTCAATGTGGTGGTaGCACTCTAGGCAAGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: GNLLSVIVINTILGKKVLSSMWW*HSRQVA Trigger: GGCTACTTGCCTAGAGTGGCACCACCACATTGAGCT...TAACACTTTCTTCCCCAAGATGGTGTTGATCACAATCACAGAAAGCAGGTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | TACTCAGTAAGGGAAGAGAGAAACAAGGAGTCTAAGTCTGTCTACATCAATTCCGATTGTGTGCTGCCATaGCTCCCTCTGCTACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: YSVREERNKESKSVYINSDCVLP*LPLLPE Trigger: TTCTGGTAGCAGAGGGAGTCATGGCAGCACACAATC...GGAATTGATGTAGACAGACTTAGACTCCTTGTTTCTCTCTTCCCTTACTGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR CCA 90 bp | CTAATGCTTAGTGTTTCCTGTGTCTGCCTCCTAGCTCCTACAATACTTGGTGTGCTCAGAGTCAGAGACTaGCAGTTTAAGTTCATCAGG | + |
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Preference number: 2 (lower is better) Translates to: LMLSVSCVCLLAPTILGVLRVRD*QFKFIR Trigger: CCTGATGAACTTAAACTGCCAGTCTCTGACTCTGAG...CACACCAAGTATTGTAGGAGCTAGGAGGCAGACACAGGAAACACTAAGCATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR CAA 90 bp | GTACTCACAGGCAAACCATTGCAAAGTCCCCCTCAGTACTTGTGTTaGACTTGGAACTATGTTCTAATGCTTAGTGTTTCCTGTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VLTGKPLQSPPQYLC*TWNYVLMLSVSCVC Trigger: GCAGACACAGGAAACACTAAGCATTAGAACATAGTTCCAAGTCAAACACAAGTACTGAGGGGGACTTTGCAATGGTTTGCCTGTGAGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTTCAGACACAGATCATCTTGAATGTATACCCTCATATGGTCTTGCACACTTCACGCAGGAGAAGATaGAGGAACCTGGAGATACAC | + |
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Preference number: 2 (lower is better) Translates to: SFQTQIILNVYPHMVLHTSRRRR*RNLEIH Trigger: GTGTATCTCCAGGTTCCTTCATCTTCTCCTGCGTGA...AGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTTCAGACACAGATCATCTTGAATGTATACCCTCATATGGTCTTGCACACTGTTACAGCCCATCACTaGGGGAAACTAGACAGGATC | + |
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Preference number: 2 (lower is better) Translates to: SFQTQIILNVYPHMVLHTVTAHH*GKLDRI Trigger: GATCCTGTCTAGTTTCCCTCAGTGATGGGCTGTAAC...AGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAACTTGACTACATTTGGAATGAACTCCAGAAATGGAAGGCACACCTCTAATCGTTCAAGGCCAGTTTaGGACAGAACAAACCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VNLTTFGMNSRNGRHTSNRSRPV*DRTNPG Trigger: GCCTGGGTTTGTTCTGTCCCAAACTGGCCTTGAACG...ATTAGAGGTGTGCCTTCCATTTCTGGAGTTCATTCCAAATGTAGTCAAGTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGTGCAACAAAGCCACTCATGCATCCCTCTCTTTCTACTATATAATATTAGTGGTTTCTGGGAATTaGACTCAGGCCCTTTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LVCNKATHASLSFYYIILVVSGN*TQALWR Trigger: CCTCCAAAGGGCCTGAGTTCAATTCCCAGAAACCAC...TAATATTATATAGTAGAAAGAGAGGGATGCATGAGTGGCTTTGTTGCACACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTGCAAAAGGCACCACCCACATTGGGATGGGTTCCTTTATATCAATTAGCAATTTCCATGCTGAATTaGATGGTCTTCATGGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: HLQKAPPTLGWVPLYQLAISMLN*MVFMVC Trigger: GCAAACCATGAAGACCATTCAATTCAGCATGGAAAT...TGCTAATTGATATAAAGGAACCCATCCCAATGTGGGTGGTGCCTTTTGCAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCACCTGCAAAAGGCACCACCCACATTGGGATGGGTTCCTTTATATCAATTCTATATTTCCATGCTaGATTGAATGGTCTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: RSTCKRHHPHWDGFLYINSIFPC*IEWSSW Trigger: CCATGAAGACCATTCAATTCAGCATGGAAATATAGA...ATTGATATAAAGGAACCCATCCCAATGTGGGTGGTGCCTTTTGCAGGTGGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR GCA 90 bp | GGTAACCTGCTTTCTGTGATTGTGATCAACACCATCTTGGGGAAGAAAGTGTTAAGTGTTTCCTGTGTCTaGCTCCTAGCTCCTACAATA | + |
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Preference number: 2 (lower is better) Translates to: GNLLSVIVINTILGKKVLSVSCV*LLAPTI Trigger: TATTGTAGGAGCTAGGAGGCAGACACAGGAAACACT...TAACACTTTCTTCCCCAAGATGGTGTTGATCACAATCACAGAAAGCAGGTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAACTTGACTACATTTGGAATGAACTCCAGAAATGGAAGGCACACCTCTAATGGTCAGTTCTTTGATTaGGGTTCCCTGTTCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: VNLTTFGMNSRNGRHTSNGQFFD*GSLFPD Trigger: ATCTGGGAACAGGGAACCTCAATCAAAGAACTGACC...ATTAGAGGTGTGCCTTCCATTTCTGGAGTTCATTCCAAATGTAGTCAAGTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR GCA 90 bp | TACTCAGTAAGGGAAGAGAGAAACAAGGAGTCTAAGTCTGTCTACATCAATTCCATATTGATTGTGTGCTaGCATGACTCCCTCTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: YSVREERNKESKSVYINSILIVC*HDSLCY Trigger: GTAGCAGAGGGAGTCATGGCAGCACACAATCAATAT...GGAATTGATGTAGACAGACTTAGACTCCTTGTTTCTCTCTTCCCTTACTGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR CCA 90 bp | CTAATGCTTAGTGTTTCCTGTGTCTGCCTCCTAGCTCCTACAATACTTGGTGTGCTATTTCATGAAGTATaGCAAGATGGAGAAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: LMLSVSCVCLLAPTILGVLFHEV*QDGETE Trigger: CTCTGTTTCTCCATCTTGCCATACTTCATGAAATAG...CACACCAAGTATTGTAGGAGCTAGGAGGCAGACACAGGAAACACTAAGCATTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTCAGACACAGATCATCTTGAATGTATACCCTCATATGGTCTTGCACACTAGAAGGTTTCCTTTATaGTCTGTCTCCAGGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SFQTQIILNVYPHMVLHTRRFPL*SVSRFL Trigger: CAGGAACCTGGAGACAGACCATAAAGGAAACCTTCT...AGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAACTTGACTACATTTGGAATGAACTCCAGAAATGGAAGGCACACCTCTAATAGGCACCACCCACATTaGGATGGGTTCCTTTATATC | + |
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Preference number: 2 (lower is better) Translates to: VNLTTFGMNSRNGRHTSNRHHPH*DGFLYI Trigger: GATATAAAGGAACCCATCCCAATGTGGGTGGTGCCT...ATTAGAGGTGTGCCTTCCATTTCTGGAGTTCATTCCAAATGTAGTCAAGTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR CAA 90 bp | ATAACAGTACTCACAGGCAAACCATTGCAAAGTCCCCCTCAGTACTaGTGTTTGACTTGGAACTATGTTCTAATGCTTAGTGTTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: ITVLTGKPLQSPPQY*CLTWNYVLMLSVSC Trigger: ACAGGAAACACTAAGCATTAGAACATAGTTCCAAGTCAAACACAAGTACTGAGGGGGACTTTGCAATGGTTTGCCTGTGAGTACTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR CAA 90 bp | GGAAGAAGGAAGACTCACTCTTCTTCCTCACCTGCTTGTACTTACTaGCAAGCATATTTGTTGAAACTATTTCTTCAGTATCCCCGCTTA | + |
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Preference number: 2 (lower is better) Translates to: GRRKTHSSSSPACTY*QAYLLKLFLQYPRL Trigger: TAAGCGGGGATACTGAAGAAATAGTTTCAACAAATATGCTTGCAAGTAAGTACAAGCAGGTGAGGAAGAAGAGTGAGTCTTCCTTCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTTTCAGACACAGATCATCTTGAATGTATACCCTCATATGGTCTTGCACACTAACTATTCAGAAGTCTaGCACAGGAAGACTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SFQTQIILNVYPHMVLHTNYSEV*HRKTVL Trigger: CAAGACAGTCTTCCTGTGGCAGACTTCTGAATAGTT...AGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR CAA 90 bp | AGCTTTCAGACACAGATCATCTTGAATGTATACCCTCATATGGTCTaGCACACTGGAAGAAATGAGTTCTCTTTCCTCTTACTCTACCTA | + |
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Preference number: 2 (lower is better) Translates to: SFQTQIILNVYPHMV*HTGRNEFSFLLLYL Trigger: TAGGTAGAGTAAGAGGAAAGAGAACTCATTTCTTCCAGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGATCCATCACCCACTGCCCTaGCTCTTGTTAAGTTTATGT | + |
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Preference number: 2 (lower is better) Translates to: VELISGHGLSVFPRCPVIHHPLP*LLLSLC Trigger: ACATAAACTTAACAAGAGGCAGGGCAGTGGGTGATG...GATCACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR CAA 90 bp | TGTTGTAAAGGTAACCTGCTTTCTGTGATTGTGATCAACACCATCTaGGGGAAGAAAGTGTTAATTTGGTTTACACTTCCATCTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CCKGNLLSVIVINTI*GKKVLIWFTLPSQK Trigger: CTTCTGAGATGGAAGTGTAAACCAAATTAACACTTTCTTCCCCAAGATGGTGTTGATCACAATCACAGAAAGCAGGTTACCTTTACAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTTTCAGACACAGATCATCTTGAATGTATACCCTCATATGGTCTTGCACACTTTAGCAACTAAGAAATaGCTCACATACAGGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: SFQTQIILNVYPHMVLHTLATKK*LTYRQC Trigger: ACATTGCCTGTATGTGAGGCATTTCTTAGTTGCTAA...AGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGATCTGGAGAATAAGCCAATaGGAAGGTTTCCTTTATGGT | + |
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Preference number: 2 (lower is better) Translates to: VELISGHGLSVFPRCPVIWRISQ*EGFLYG Trigger: ACCATAAAGGAAACCTTCTCATTGGCTTATTCTCCA...GATCACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGATCTTCTTGATTAATGATTaGAGGGGAAGTCCAAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VELISGHGLSVFPRCPVIFLIND*RGSPKL Trigger: GAGCTTTGGACTTCCCCTTCAATCATTAATCAAGAA...GATCACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATCTGTTGTAAAGGTAACCTGCTTTCTGTGATTGTGATCAACACCATCTTGCCACCCACATTGGGATaGGTTCCTTTATATCAATTA | + |
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Preference number: 2 (lower is better) Translates to: IICCKGNLLSVIVINTILPPTLG*VPLYQL Trigger: TAATTGATATAAAGGAACCCATCCCAATGTGGGTGG...CAAGATGGTGTTGATCACAATCACAGAAAGCAGGTTACCTTTACAACAGATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTCAGACACAGATCATCTTGAATGTATACCCTCATATGGTCTTGCACACTAAACTTGACTACATTTaGAATGAACTCCAGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: SFQTQIILNVYPHMVLHTKLDYI*NELQKW Trigger: CCATTTCTGGAGTTCATTCCAAATGTAGTCAAGTTT...AGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTTCTTAGAAGGTTTGAGAGCAGAAGGGTAAAACCAGAAACTTCAAAGTTGTGTCTGGCATTTTCTTaGTTAATGATTGAAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HFLRRFESRRVKPETSKLCLAFS*LMIEGE Trigger: TTCCCCTTCAATCATTAATCAAGAAAATGCCAGACA...CAACTTTGAAGTTTCTGGTTTTACCCTTCTGCTCTCAAACCTTCTAAGAAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGTTAGGTTCTCTCAAATaGGGCAATTATGCTTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: KVELISGHGLSVFPRCPVLGSLK*GNYAFH Trigger: ATGGAAAGCATAATTGCCTCATTTGAGAGAACCTAA...CACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGATCTATGTCATTCCTCATTaGATTCAAGGACTAACATTC | + |
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Preference number: 2 (lower is better) Translates to: VELISGHGLSVFPRCPVIYVIPH*IQGLTF Trigger: GAATGTTAGTCCTTGAATGCAATGAGGAATGACATA...GATCACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGATGGTCTTCATGGTTTaGGCTTTTTATGTCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: KVELISGHGLSVFPRCPVMVFMV*AFYVIP Trigger: AGGAATGACATAAAAAGCGCAAACCATGAAGACCAT...CACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| 3UTR TCA 72 bp | GAGATGGCTGTGAGCCACCATGTGGTTTCTGGGAATTaGACTCAGGCCCTTTGGAGGAGCCATCTGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EMAVSHHVVSGN*TQALWRSHLSR Trigger: TCTGGACAGATGGCTCCTCCAAAGGGCCTGAGTTCAATTCCCAGAAACCACATGGTGGCTCACAGCCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR TCA 72 bp | GGTCTGTCTCCAGGTTCCTGTCTTGAGTTCCTGCCCTaGCTTCCCACTGTCATGGAGTGTGATGTAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLSPGSCLEFLP*LPTVMECDVES Trigger: ACTCTCTACATCACACTCCATGACAGTGGGAAGTCAGGGCAGGAACTCAAGACAGGAACCTGGAGACAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR TCA 72 bp | AGGTTTCCTTTATGGTCTGTCTCCAGGTTCCTGTCTTaGGTTCCTGCCCTGACTTCCCACTGTCATGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RFPLWSVSRFLS*VPALTSHCHGV Trigger: CACTCCATGACAGTGGGAAGTCAGGGCAGGAACTCAAGACAGGAACCTGGAGACAGACCATAAAGGAAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR GCA 72 bp | ATGATTGAAGGGGAAGTCCAAAGCTCAATGTGGTGGTaGCACTCTAGGCAAGTAGCCCTGAGGTGTATAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MIEGEVQSSMWW*HSRQVALRCIS Trigger: ACTTATACACCTCAGGGCTACTTGCCTAGAGTGGCACCACCACATTGAGCTTTGGACTTCCCCTTCAATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCTGCAAAAGGCACCACCCACATTGGGATGGGTTCCTTTATATCAATTAGCATGTGGTTTCTGGGAATaGAACTCAGGCCCTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLQKAPPTLGWVPLYQLACGFWE*NSGPLE Trigger: CTCCAAAGGGCCTGAGTTCAATTCCCAGAAACCACA...TGCTAATTGATATAAAGGAACCCATCCCAATGTGGGTGGTGCCTTTTGCAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CCA 72 bp | TTAATGATTGAAGGGGAAGTCCAAAGCTCAATGTGGTaGTGCCACTCTAGGCAAGTAGCCCTGAGGTGTATA | + |
|
Preference number: 3 (lower is better) Translates to: LMIEGEVQSSMW*CHSRQVALRCI Trigger: TATACACCTCAGGGCTACTTGCCTAGAGTGGCACCACCACATTGAGCTTTGGACTTCCCCTTCAATCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGACAGAAGCAAGCAGATCTCTGCTCTCTGCGTTCAAGGCCAGTTTGGGACAATGGTCTTCATGGTTaGCGCTTTTTATGTCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: KRQKQADLCSLRSRPVWDNGLHG*RFLCHS Trigger: GGAATGACATAAAAAGCGCAAACCATGAAGACCATT...GTCCCAAACTGGCCTTGAACGCAGAGAGCAGAGATCTGCTTGCTTCTGTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CCA 72 bp | GAGGTCCACCTGCAAAAGGCACCACCCACATTGGGATaGGTTCCTTTATATCAATTAGCAACTAAGAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: EVHLQKAPPTLG*VPLYQLATKKC Trigger: GCATTTCTTAGTTGCTAATTGATATAAAGGAACCCATCCCAATGTGGGTGGTGCCTTTTGCAGGTGGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGACAGAAGCAAGCAGATCTCTGCTCTCTGCGTTCAAGGCCAGTTTGGGACTATTTCCATGCTGAATaGAATGGTCTTCATGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KRQKQADLCSLRSRPVWDYFHAE*NGLHGL Trigger: CAAACCATGAAGACCATTCAATTCAGCATGGAAATA...GTCCCAAACTGGCCTTGAACGCAGAGAGCAGAGATCTGCTTGCTTCTGTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAATGCTTAGTGTTTCCTGTGTCTGCCTCCTAGCTCCTACAATACTTGGTGTGTGGAGAAACAGAGAGTaGAAGCTTTGTATTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LMLSVSCVCLLAPTILGVWRNRE*KLCIFL Trigger: GAGGAAAATACAAAGCTTCAACTCTCTGTTTCTCCA...CACACCAAGTATTGTAGGAGCTAGGAGGCAGACACAGGAAACACTAAGCATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CCA 72 bp | CCATTGCAAAGTCCCCCTCAGTACTTGTGTTTGACTTaGAACTATGTTCTAATGCTTAGTGTTTCCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PLQSPPQYLCLT*NYVLMLSVSCV Trigger: GACACAGGAAACACTAAGCATTAGAACATAGTTCCAAGTCAAACACAAGTACTGAGGGGGACTTTGCAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCTGCAAAAGGCACCACCCACATTGGGATGGGTTCCTTTATATCAATTAGCAGTACTTGTGTTTGACTaGGAACTATGTTCTAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLQKAPPTLGWVPLYQLAVLVFD*ELCSNA Trigger: AGCATTAGAACATAGTTCCAAGTCAAACACAAGTAC...TGCTAATTGATATAAAGGAACCCATCCCAATGTGGGTGGTGCCTTTTGCAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR TCA 72 bp | GTAATTAGGATAAGCAAACCATGGAGAATAAGCCAATaGGAAGGTTTCCTTTATGGTCTGTCTCCAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VIRISKPWRISQ*EGFLYGLSPGS Trigger: GGAACCTGGAGACAGACCATAAAGGAAACCTTCTCATTGGCTTATTCTCCATGGTTTGCTTATCCTAATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAACTTGACTACATTTGGAATGAACTCCAGAAATGGAAGGCACACCTCTAATGACAAGAACCCTCAGTaGAGAAAAGGCCCCTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: VNLTTFGMNSRNGRHTSNDKNPQ*RKGPYK Trigger: TTTATAGGGGCCTTTTCTCAACTGAGGGTTCTTGTC...ATTAGAGGTGTGCCTTCCATTTCTGGAGTTCATTCCAAATGTAGTCAAGTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAATCTGTTGTAAAGGTAACCTGCTTTCTGTGATTGTGATCAACACCATCTTGACACTGCTAACTAGCTaGCTCACTCTTGAGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IICCKGNLLSVIVINTILTLLTS*LTLECS Trigger: TGAGCACTCAAGAGTGAGCAAGCTAGTTAGCAGTGT...CAAGATGGTGTTGATCACAATCACAGAAAGCAGGTTACCTTTACAACAGATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTTCAGACACAGATCATCTTGAATGTATACCCTCATATGGTCTTGCACACTCACAGGAAGACTGTCTaGTTCTTAAGCAAATGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SFQTQIILNVYPHMVLHTHRKTV*FLSKCN Trigger: ATTGCATTTGCTTAAGAACAAGACAGTCTTCCTGTG...AGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGAAGGCACCACCCACATaGGGATGGGTTCCTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: KVELISGHGLSVFPRCPVKAPPT*GWVPLY Trigger: ATATAAAGGAACCCATCCCAATGTGGGTGGTGCCTT...CACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR GCA 72 bp | GCTCCTACAATACTTGGTGTGCAACAAAGCCACTCATaGATCCCTCTCTTTCTACTATATAATATTACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: APTILGVQQSHS*IPLFLLYNITP Trigger: AGGAGTAATATTATATAGTAGAAAGAGAGGGATGCATGAGTGGCTTTGTTGCACACCAAGTATTGTAGGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAACTTGACTACATTTGGAATGAACTCCAGAAATGGAAGGCACACCTCTAATCAGAGAGTTGAAGCTTaGTATTTTCCTCAGCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VNLTTFGMNSRNGRHTSNQRVEA*YFPQLH Trigger: ATGAAGCTGAGGAAAATACAAAGCTTCAACTCTCTG...ATTAGAGGTGTGCCTTCCATTTCTGGAGTTCATTCCAAATGTAGTCAAGTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR TCA 72 bp | CTTAGAATTCAGTTAGCTTTCAGACACAGATCATCTTaGATGTATACCCTCATATGGTCTTGCACACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRIQLAFRHRSS*MYTLIWSCTLE Trigger: TTCCAGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGTCTGAAAGCTAACTGAATTCTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGATCGGAAAAAGAAACCCTTaGGTTAAGCTAAACCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VELISGHGLSVFPRCPVIGKRNP*VKLNQF Trigger: GAACTGGTTTAGCTTAACCAAAGGGTTTCTTTTTCC...GATCACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGATCACCAGCCAAATGAGATaGAGCAACTACAAGATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VELISGHGLSVFPRCPVITSQMR*SNYKIL Trigger: AAGAATCTTGTAGTTGCTCAATCTCATTTGGCTGGT...GATCACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR GCA 72 bp | GTCTTCATGGTTTGCGCTTTTTATGTCATTCCTCATTaGATTCAAGGACTAACATTCCTTTATCTGTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: VFMVCAFYVIPH*IQGLTFLYLSS Trigger: TGATGACAGATAAAGGAATGTTAGTCCTTGAATGCAATGAGGAATGACATAAAAAGCGCAAACCATGAAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTTTCTTAGAAGGTTTGAGAGCAGAAGGGTAAAACCAGAAACTTCAAAGTTGAAGCACTGTCACCATTaGTTTAGTGAAAATCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: HFLRRFESRRVKPETSKLKHCHH*FSENPL Trigger: AAGTGGATTTTCACTAAACAAATGGTGACAGTGCTT...CAACTTTGAAGTTTCTGGTTTTACCCTTCTGCTCTCAAACCTTCTAAGAAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGTGCAACAAAGCCACTCATGCATCCCTCTCTTTCTACTATATAATATTAGGAAACAAAATAGTTTaGATTCGTGGAACCCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LVCNKATHASLSFYYIILGNKIV*IRGTQT Trigger: AGTTTGGGTTCCACGAATCAAAACTATTTTGTTTCC...TAATATTATATAGTAGAAAGAGAGGGATGCATGAGTGGCTTTGTTGCACACCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGAAGGCCCCTATAAATTaGGATGATAAGCAAGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KVELISGHGLSVFPRCPVKAPIN*DDKQVC Trigger: ACAGACTTGCTTATCATCCAAATTTATAGGGGCCTT...CACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAACTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGTATCATACTGTAGCATaGAACTTGCCCATTCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: KVELISGHGLSVFPRCPVYHTVA*NLPILS Trigger: TGATAGAATGGGCAAGTTCAATGCTACAGTATGATA...CACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | AGAGATGGCTGTGAGCCACCATGTGGTTTCTGGGAATaGAACTCAGGCCCTTTGGAGGAGCCATCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDGCEPPCGFWE*NSGPLEEPSVQ Trigger: CTGGACAGATGGCTCCTCCAAAGGGCCTGAGTTCAATTCCCAGAAACCACATGGTGGCTCACAGCCATCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGTTACAGCCCATCACTGAGGGAAACTAGACAGGATCTCACGCAGGAGAAGGAGCCTCTGACACATTaGGTGTCTGGGACTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESYSPSLRETRQDLTQEKEPLTH*VSGTDC Trigger: ACAATCAGTCCCAGACACTCAATGTGTCAGAGGCTC...CTTCTCCTGCGTGAGATCCTGTCTAGTTTCCCTCAGTGATGGGCTGTAACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR GCA 90 bp | CACCTGCAAAAGGCACCACCCACATTGGGATGGGTTCCTTTATATCAATTAGCAGGCACCCTGAAAGACTaGATCTCTCAAGACCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLQKAPPTLGWVPLYQLAGTLKD*ISQDHE Trigger: CTCATGGTCTTGAGAGATGCAGTCTTTCAGGGTGCC...TGCTAATTGATATAAAGGAACCCATCCCAATGTGGGTGGTGCCTTTTGCAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR CCA 90 bp | CACCTGCAAAAGGCACCACCCACATTGGGATGGGTTCCTTTATATCAATTAGCACTGATTGTGATGGCCTaGACCACAGTAAGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HLQKAPPTLGWVPLYQLALIVMA*TTVRRL Trigger: CAGTCTCCTTACTGTGGTCCAGGCCATCACAATCAG...TGCTAATTGATATAAAGGAACCCATCCCAATGTGGGTGGTGCCTTTTGCAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR TCA 90 bp | CTAATGCTTAGTGTTTCCTGTGTCTGCCTCCTAGCTCCTACAATACTTGGTGTGCCAAGTGAGCAAGAATaGGGTGTATGGGTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMLSVSCVCLLAPTILGVPSEQE*GVWVSA Trigger: AGCAGAAACCCATACACCTCATTCTTGCTCACTTGG...CACACCAAGTATTGTAGGAGCTAGGAGGCAGACACAGGAAACACTAAGCATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTGTGCAACAAAGCCACTCATGCATCCCTCTCTTTCTACTATATAATATTAGACTGCTGGTACAGATaGAGAGGCCCCGGGACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LVCNKATHASLSFYYIILDCWYR*RGPGTL Trigger: GAGTGTCCCGGGGCCTCTCCATCTGTACCAGCAGTC...TAATATTATATAGTAGAAAGAGAGGGATGCATGAGTGGCTTTGTTGCACACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGACAGAAGCAAGCAGATCTCTGCTCTCTGCGTTCAAGGCCAGTTTGGGACAGATGTTCATCTCTATaGATCAGTATGAAGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KRQKQADLCSLRSRPVWDRCSSL*ISMKGL Trigger: TAGCCCCTTCATACTGATTCATAGAGATGAACATCT...GTCCCAAACTGGCCTTGAACGCAGAGAGCAGAGATCTGCTTGCTTCTGTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTCTTAGAAGGTTTGAGAGCAGAAGGGTAAAACCAGAAACTTCAAAGTTGCACTGGCGCCTCCCATaGCACCCTGAAAGACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFLRRFESRRVKPETSKLHWRLP*HPERLH Trigger: ATGCAGTCTTTCAGGGTGCCATGGGAGGCGCCAGTG...CAACTTTGAAGTTTCTGGTTTTACCCTTCTGCTCTCAAACCTTCTAAGAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | AAGATGAAGGAACCTGGAGATACACTGCTAACTAGCTaGCTCACTCTTGAGTGCTCAGGTGCCTTTCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: KMKEPGDTLLTS*LTLECSGAFLI Trigger: TATAAGAAAGGCACCTGAGCACTCAAGAGTGAGCAAGCTAGTTAGCAGTGTATCTCCAGGTTCCTTCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR CCA 90 bp | CTAATGCTTAGTGTTTCCTGTGTCTGCCTCCTAGCTCCTACAATACTTGGTGTGCAGCAACTTTACAGCTaGTGTCATCTAAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMLSVSCVCLLAPTILGVQQLYS*CHLRSC Trigger: ACAACTTCTTAGATGACACCAGCTGTAAAGTTGCTG...CACACCAAGTATTGTAGGAGCTAGGAGGCAGACACAGGAAACACTAAGCATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | GGCAAACCATTGCAAAGTCCCCCTCAGTACTTGTGTTaGACTTGGAACTATGTTCTAATGCTTAGTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKPLQSPPQYLC*TWNYVLMLSVS Trigger: GGAAACACTAAGCATTAGAACATAGTTCCAAGTCAAACACAAGTACTGAGGGGGACTTTGCAATGGTTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | CTCACAGGCAAACCATTGCAAAGTCCCCCTCAGTACTaGTGTTTGACTTGGAACTATGTTCTAATGCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTGKPLQSPPQY*CLTWNYVLMLS Trigger: ACTAAGCATTAGAACATAGTTCCAAGTCAAACACAAGTACTGAGGGGGACTTTGCAATGGTTTGCCTGTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | TGTATTAGAACAAGAAAATCTGTCCTGGTCAGTTCTTaGATTGAGGTTCCCTGTTCCCAGATGGCTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CIRTRKSVLVSS*IEVPCSQMALS Trigger: ACTCAGAGCCATCTGGGAACAGGGAACCTCAATCAAAGAACTGACCAGGACAGATTTTCTTGTTCTAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | GATCATGGTTATTCTGAATATAAACATTGTTGTTTTTaGATAGGGCCTTCTGCCCCATCACCCACTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DHGYSEYKHCCF*IGPSAPSPTAL Trigger: CAGGGCAGTGGGTGATGGGGCAGAAGGCCCTATCAAAAAACAACAATGTTTATATTCAGAATAACCATGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTCTTAGAAGGTTTGAGAGCAGAAGGGTAAAACCAGAAACTTCAAAGTTGTTTAGTTTGAGCCTCTaGCACATTGAGTGTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HFLRRFESRRVKPETSKLFSLSL*HIECLG Trigger: TCCCAGACACTCAATGTGTCAGAGGCTCAAACTAAA...CAACTTTGAAGTTTCTGGTTTTACCCTTCTGCTCTCAAACCTTCTAAGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTGTGCAACAAAGCCACTCATGCATCCCTCTCTTTCTACTATATAATATTAGTGGGGTTTTTAGTTTaGGCCTCTGACACATTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVCNKATHASLSFYYIILVGFLV*ASDTLS Trigger: ACTCAATGTGTCAGAGGCTCAAACTAAAAACCCCAC...TAATATTATATAGTAGAAAGAGAGGGATGCATGAGTGGCTTTGTTGCACACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | GGTAACCTGCTTTCTGTGATTGTGATCAACACCATCTaGGGGAAGAAAGTGTTAATTTGGTTTACACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNLLSVIVINTI*GKKVLIWFTLP Trigger: TGGAAGTGTAAACCAAATTAACACTTTCTTCCCCAAGATGGTGTTGATCACAATCACAGAAAGCAGGTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | GGTCTTCATGGTTTGCGCTTTTTATGTCATTCCTCATaGCATTCAAGGACTAACATTCCTTTATCTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLHGLRFLCHSS*HSRTNIPLSVI Trigger: GATGACAGATAAAGGAATGTTAGTCCTTGAATGCAATGAGGAATGACATAAAAAGCGCAAACCATGAAGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | ACACAGATCATCTTGAATGTATACCCTCATATGGTCTaGCACACTGGAAGAAATGAGTTCTCTTTCCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TQIILNVYPHMV*HTGRNEFSFLL Trigger: TAAGAGGAAAGAGAACTCATTTCTTCCAGTGTGCAAGACCATATGAGGGTATACATTCAAGATGATCTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | CTATATTTCCATGCTGAATTGAATGGTCTTCATGGTTaGCGCTTTTTATGTCATTCCTCATTGCATTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFHAELNGLHG*RFLCHSSLHSR Trigger: CCTTGAATGCAATGAGGAATGACATAAAAAGCGCAAACCATGAAGACCATTCAATTCAGCATGGAAATATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGTTTGTAAATGCCAAGTaGGCAAGAATGAGGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: KVELISGHGLSVFPRCPVFVNAK*ARMRCM Trigger: CATACACCTCATTCTTGCTCACTTGGCATTTACAAA...CACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAACTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
||
| 3UTR CAA 72 bp | GGAAGGTTTAATCTCATCTTCCAAAAATTAGAACTCTaGGGCCATCTTTACTTCCTATGTCAAATAATCTGT | + |
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Preference number: 4 (lower is better) Translates to: GRFNLIFQKLEL*GHLYFLCQIIC Trigger: ACAGATTATTTGACATAGGAAGTAAAGATGGCCCAAGAGTTCTAATTTTTGGAAGATGAGATTAAACCTTCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| CDS-3UTR CAA 90 bp | CACCTGCAAAAGGCACCACCCACATTGGGATGGGTTCCTTTATATCAATTAGCAGGCCCCGGGACACTCTaGCCAGGTAGACAGCAACTT | + |
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Preference number: 5 (lower is better) Translates to: HLQKAPPTLGWVPLYQLAGPGTL*PGRQQL Trigger: AAGTTGCTGTCTACCTGGCAAGAGTGTCCCGGGGCC...TGCTAATTGATATAAAGGAACCCATCCCAATGTGGGTGGTGCCTTTTGCAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| CDS CCA 90 bp | CACTCTGGGCAGCTCTCAGTTCAGGGGGAGTTCTGTAGAGAAGTTTaGAGGTCTGAAGGTAGAGGACATGCTGGTGATGCTTATGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: HSGQLSVQGEFCREV*RSEGRGHAGDAYGE Trigger: TTCTCCATAAGCATCACCAGCATGTCCTCTACCTTCAGACCTCCAAACTTCTCTACAGAACTCCCCCTGAACTGAGAGCTGCCCAGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073728.5 ENSMUST00000228645.2 |
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| CDS-3UTR CAA 90 bp | GTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGATCATGCTGATCAAGGAATaGAGTATCCACAGGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: VELISGHGLSVFPRCPVIMLIKE*SIHRQR Trigger: CCTCTGCCTGTGGATACTCAATTCCTTGATCAGCAT...GATCACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| CDS-3UTR CAA 90 bp | TACTCAGTAAGGGAAGAGAGAAACAAGGAGTCTAAGTCTGTCTACATCAATTCCTTTCTGCTCAGTACTTaGGAACATGTGCATATAACT | + |
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Preference number: 5 (lower is better) Translates to: YSVREERNKESKSVYINSFLLST*EHVHIT Trigger: AGTTATATGCACATGTTCCAAAGTACTGAGCAGAAA...GGAATTGATGTAGACAGACTTAGACTCCTTGTTTCTCTCTTCCCTTACTGAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| CDS-3UTR CAA 90 bp | AAAGTTGAATTAATTTCAGGACATGGACTTTCAGTTTTTCCTAGATGTCCAGTGGTGTCATCTAAGAAGTaGTCAAAATTAAAGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: KVELISGHGLSVFPRCPVVSSKK*SKLKAP Trigger: AGGAGCCTTTAATTTTGACAACTTCTTAGATGACAC...CACTGGACATCTAGGAAAAACTGAAAGTCCATGTCCTGAAATTAATTCAACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228645.2 |
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| CDS CAA 72 bp | GACTGCTGGTACAGATGGAGAGGCCCCGGGACACTCTaGCCAGGTAGACAGCAACTTTACAGCTGGTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: DCWYRWRGPGTL*PGRQQLYSWCH Trigger: ATGACACCAGCTGTAAAGTTGCTGTCTACCTGGCAAGAGTGTCCCGGGGCCTCTCCATCTGTACCAGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073728.5 ENSMUST00000228645.2 |
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| CDS CCA 72 bp | GGTGATGCTTATGGAGAAGAAATACCATGTAGCCACTaGCGCCTCCCATGGCACCCTGAAAGACTGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: GDAYGEEIPCSH*RLPWHPERLHL Trigger: GAGATGCAGTCTTTCAGGGTGCCATGGGAGGCGCCAGTGGCTACATGGTATTTCTTCTCCATAAGCATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073728.5 ENSMUST00000228645.2 |
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| CDS CCA 72 bp | CAGCTCTCAGTTCAGGGGGAGTTCTGTAGAGAAGTTTaGAGGTCTGAAGGTAGAGGACATGCTGGTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: QLSVQGEFCREV*RSEGRGHAGDA Trigger: AGCATCACCAGCATGTCCTCTACCTTCAGACCTCCAAACTTCTCTACAGAACTCCCCCTGAACTGAGAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073728.5 ENSMUST00000228645.2 |
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