Pregenerated sensors for VMN1R209 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071491Ensembl transcript IDs: ENSMUST00000095961.2, ENSMUST00000227038.2, ENSMUST00000227265.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAACTTTATATGCCTCAATACAGGGGAACGCCAGGGCCAATAAGTaGATGTGGTTGGCTGGTTGGGGGAGTGGGTGCAGGAGCATATGG | + |
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Preference number: 1 (lower is better) Translates to: QTLYASIQGNARANK*MWLAGWGSGCRSIW Trigger: CCATATGCTCCTGCACCCACTCCCCCAACCAGCCAACCACATCCACTTATTGGCCCTGGCGTTCCCCTGTATTGAGGCATATAAAGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR TCA 90 bp | CCGGAGTTCCAGGAGCATGAGGGAACGCCTACAGTGTCATGTGGGTaGATTATGACCATTGAGGTTCAGACCTCAGCTCAACTGGAGATC | + |
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Preference number: 1 (lower is better) Translates to: PEFQEHEGTPTVSCG*IMTIEVQTSAQLEI Trigger: GATCTCCAGTTGAGCTGAGGTCTGAACCTCAATGGTCATAATTCACCCACATGACACTGTAGGCGTTCCCTCATGCTCCTGGAACTCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR GCA 90 bp | GTCTCTTGTGAGACTATGCCGGAGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATCACAGGGAACCCAATGGAGGAGCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: VSCETMPEPSKHRSG*SQSAITGNPMEELE Trigger: CTCTAGCTCCTCCATTGGGTTCCCTGTGATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCTCCGGCATAGTCTCACAAGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR TCA 90 bp | GAACAAAACACCCATGGAACAGGTTACAGAGACAAAGTTTGGAGCTaGGACGAAAGGATGGACCATCTAGAGACTGCTGTATCCGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: EQNTHGTGYRDKVWS*DERMDHLETAVSGD Trigger: ATCCCCGGATACAGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACCTGTTCCATGGGTGTTTTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR TCA 90 bp | CAGTGCTTGAGAGATGGATCAAGATTTAAGAACATTGTCTGGGCCTaGGCATCAGAAGATGTTCCAACCTGTAGGAAGGACACATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: QCLRDGSRFKNIVWA*ASEDVPTCRKDTCS Trigger: AGAGCATGTGTCCTTCCTACAGGTTGGAACATCTTCTGATGCTCAGGCCCAGACAATGTTCTTAAATCTTGATCCATCTCTCAAGCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR TCA 90 bp | AGCTTCCAAAGGCTGACATCATTGTATACACTAGCAATATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCCGGAG | + |
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Preference number: 1 (lower is better) Translates to: SFQRLTSLYTLAIFC*KDPDIAVSCETMPE Trigger: CTCCGGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATATTGCTAGTGTATACAATGATGTCAGCCTTTGGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR GCA 90 bp | GGATGCAGTTGCATTTGTGTCTGCTATGCTCCTATAATGATGATGTaGCCAGGTGATTCATGTACACAGATTCACTCAACTCAATTTAGG | + |
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Preference number: 1 (lower is better) Translates to: GCSCICVCYAPIMMM*PGDSCTQIHSTQFR Trigger: CCTAAATTGAGTTGAGTGAATCTGTGTACATGAATCACCTGGGCACATCATCATTATAGGAGCATAGCAGACACAAATGCAACTGCATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CCA 90 bp | TCTCTAGCTGCATATGAATCAGAAAATGTCCTAGTCAGCCATCATTaGAAAGAGAGGCCCTTTGGTCTTGCAAACTTTATATGCCTCAAT | + |
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Preference number: 1 (lower is better) Translates to: SLAAYESENVLVSHH*KERPFGLANFICLN Trigger: ATTGAGGCATATAAAGTTTGCAAGACCAAAGGGCCTCTCTTTCCAATGATGGCTGACTAGGACATTTTCTGATTCATATGCAGCTAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CCA 90 bp | TGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAAAAGCTaGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CSTMFIAALFIIAKS*KEPRCPSTEEWIQK Trigger: TTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTTTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR TCA 90 bp | AGATATCAAGCTCTAAGTAGCCACAGCTTCATATTTCTGATTATATaGGGAACCAGTCACAAGCAGGGTTCACAAATGCACATAGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: RYQALSSHSFIFLII*GTSHKQGSQMHIVS Trigger: AGAAACTATGTGCATTTGTGAACCCTGCTTGTGACTGGTTCCTCATATAATCAGAAATATGAAGCTGTGGCTACTTAGAGCTTGATATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR TCA 90 bp | TCCTGGTTGTCTCTTATGCCAAACTCCCCATTCATTTTGTTAATTTaGCTAGTGTTTCTTCACATTTCACTTAGTTTAGATAAGGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: SWLSLMPNSPFILLI*LVFLHISLSLDKGL Trigger: CAAACCCTTATCTAAACTAAGTGAAATGTGAAGAAACACTAGTCAAATTAACAAAATGAATGGGGAGTTTGGCATAAGAGACAACCAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCTGTGGTGGACTGTGGTaGTCAGAGGAGGATGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSCGGLW*SEEDAE Trigger: CTCTGCATCCTCCTCTGACCACCACAGTCCACCACA...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCATAAGTGGATGTGGTTaGCTGGTTGGGGGAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSISGCG*LVGGVG Trigger: ACCCACTCCCCCAACCAGCCAACCACATCCACTTAT...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCCTAGTCAGCCATCATTaGAAAGAGAGGCCCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSLVSHH*KERPFG Trigger: ACCAAAGGGCCTCTCTTTCCAATGATGGCTGACTAG...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCGGACTAATTGAAGGTTaGCCCCAACTCCCCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSGLIEG*PQLPRK Trigger: TTTTCTGGGGAGTTGGGGCCAACCTTCAATTAGTCC...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCGTGGTCAGAGGAGGATaGAGAGGCTTATTTCAATTT | + |
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Preference number: 2 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSVVRGG*RGLFQF Trigger: AAATTGAAATAAGCCTCTGCATCCTCCTCTGACCAC...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGGGGATCCATCCCATAATCAGCTTCCAAAGGCTGACATCATTGTATACACTGGTTGGGGGAGTGGGTaGAGGAGCATATGGGGGACT | + |
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Preference number: 2 (lower is better) Translates to: SGDPSHNQLPKADIIVYTGWGSG*RSIWGT Trigger: AGTCCCCCATATGCTCCTGCACCCACTCCCCCAACC...AGTGTATACAATGATGTCAGCCTTTGGAAGCTGATTATGGGATGGATCCCCGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACGGCTGGTTGGGGGAGTaGGTGCAGGAGCATATGGGG | + |
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Preference number: 2 (lower is better) Translates to: KVWTLCPFLELGTKHPWNGWLGE*VQEHMG Trigger: CCCCATATGCTCCTGCACCCACTCCCCCAACCAGCC...GTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCACCTGGGGTCAAGGCTAAGCTGAGTTCCATTCTCCACTCACAAGAACATAAGTTCTGTGACTGGTaGAATGGTCCCCCATTGACT | + |
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Preference number: 2 (lower is better) Translates to: LPPGVKAKLSSILHSQEHKFCDW*NGPPLT Trigger: AGTCAATGGGGGACCATTGCACCAGTCACAGAACTT...ATGTTCTTGTGAGTGGAGAATGGAACTCAGCTTAGCCTTGACCCCAGGTGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGGGCTGGTTGGGGGAGTaGGTGCAGGAGCATATGGGG | + |
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Preference number: 2 (lower is better) Translates to: VIALYRVVIFSCTEFLGLGWLGE*VQEHMG Trigger: CCCCATATGCTCCTGCACCCACTCCCCCAACCAGCC...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACGCCAATAAGTGGATGTaGTTGGCTGGTTGGGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: KVWTLCPFLELGTKHPWNANKWM*LAGWGS Trigger: ACTCCCCCAACCAGCCAACCACATCCACTTATTGGC...GTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGCTAAGGCACAGGACATaGACATGTTGCACAACAATC | + |
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Preference number: 2 (lower is better) Translates to: IAKSWKEPRCPSTEEWIQLRHRT*TCCTTI Trigger: GATTGTTGTGCAACATGTGCATGTCCTGTGCCTTAG...CTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTTTGGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCACCTGGGGTCAAGGCTAAGCTGAGTTCCATTCTCCACTCACAAGAACATGACCTATTTTCTCAGTaGTTGAGAGATGGATCAAGA | + |
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Preference number: 2 (lower is better) Translates to: LPPGVKAKLSSILHSQEHDLFSQ*LRDGSR Trigger: TCTTGATCCATCTCTCAAGCACTGAGAAAATAGGTC...ATGTTCTTGTGAGTGGAGAATGGAACTCAGCTTAGCCTTGACCCCAGGTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGCTTCATATTTCTGATTATATGAGGAACCAGTCACAAGCAGGGTTCACAATAAGTGGATGTGGTTaGCTGGTTGGGGGAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PQLHISDYMRNQSQAGFTISGCG*LVGGVG Trigger: ACCCACTCCCCCAACCAGCCAACCACATCCACTTAT...TGTGAACCCTGCTTGTGACTGGTTCCTCATATAATCAGAAATATGAAGCTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACTGACCCAATAATAGCCAAAAGCTaGAAAGAACCCAGATGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LPFGCLTWEHLEVSTTDPIIAKS*KEPRCP Trigger: GGGGCATCTGGGTTCTTTCCAGCTTTTGGCTATTAT...TGGGTCAGTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CAA 90 bp | GAATTGGGAACAAAACACCCATGGAACAGGTTACAGAGACAAAGTTaGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCTGTATC | + |
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Preference number: 2 (lower is better) Translates to: ELGTKHPWNRLQRQS*ELRRKDGPSRDCCI Trigger: GATACAGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACCTGTTCCATGGGTGTTTTGTTCCCAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCACCTGGGGTCAAGGCTAAGCTGAGTTCCATTCTCCACTCACAAGAACATACAGCTTCATATTTCTaGTTATATGAGGAACCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LPPGVKAKLSSILHSQEHTASYF*LYEEPV Trigger: GACTGGTTCCTCATATAATCAGAAATATGAAGCTGT...ATGTTCTTGTGAGTGGAGAATGGAACTCAGCTTAGCCTTGACCCCAGGTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGGAGGCCCTTTGGTCTTaGAAACTTTATATGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: IAKSWKEPRCPSTEEWIQEALWS*KLYMPQ Trigger: TTGAGGCATATAAAGTTTGCAAGACCAAAGGGCCTC...CTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTTTGGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACTGACCCATTTCTTAAGGGTGTATaGGCATTCCACACACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: LPFGCLTWEHLEVSTTDPFLKGV*AFHTLK Trigger: CTTCAGTGTGTGGAATGCGCATACACCCTTAAGAAA...TGGGTCAGTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCACCTGGGGTCAAGGCTAAGCTGAGTTCCATTCTCCACTCACAAGAACATCATTTGTGTCTGCTATaGTCCTATAATGATGATGTG | + |
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Preference number: 2 (lower is better) Translates to: LPPGVKAKLSSILHSQEHHLCLL*SYNDDV Trigger: CACATCATCATTATAGGAGCATAGCAGACACAAATG...ATGTTCTTGTGAGTGGAGAATGGAACTCAGCTTAGCCTTGACCCCAGGTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGATCTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACATAATAGCCAAAAGCTaGAAAGAACCCAGATGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LRSAFWVSYLGTSRSKYHIIAKS*KEPRCP Trigger: GGGGCATCTGGGTTCTTTCCAGCTTTTGGCTATTAT...GTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAGATCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CAA 90 bp | TGGAGCCTATTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTaGCTGCCACAGTCACATATTATCTTGGGGAGACACAAAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: WSLFSHMHLRFQSHF*LPQSHIILGRHKGC Trigger: ACATCCTTTGTGTCTCCCCAAGATAATATGTGACTGTGGCAGCAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAATAGGCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCCTAAGGCACAGGACATaGACATGTTGCACAACAATC | + |
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Preference number: 2 (lower is better) Translates to: KFCDWCNGPPLTKYTVNALRHRT*TCCTTI Trigger: GATTGTTGTGCAACATGTGCATGTCCTGTGCCTTAG...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACGGAGCTAAAGGAATCTaGAATCCTACAGGTGGAACA | + |
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Preference number: 2 (lower is better) Translates to: KVWTLCPFLELGTKHPWNGAKGI*NPTGGT Trigger: TGTTCCACCTGTAGGATTGCAGATTCCTTTAGCTCC...GTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAGATCTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACAAACACAGAAGTGGATaGTCACAGTCAGCTATCACA | + |
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Preference number: 2 (lower is better) Translates to: LRSAFWVSYLGTSRSKYHKHRSG*SQSAIT Trigger: TGTGATAGCTGACTGTGAGCATCCACTTCTGTGTTT...GTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAGATCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCACCTGGGGTCAAGGCTAAGCTGAGTTCCATTCTCCACTCACAAGAACATAAAAAGAACATTGTCTaGTTTCCTTCTAGAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: LPPGVKAKLSSILHSQEHKKNIV*FPSRNP Trigger: AGGGTTTCTAGAAGGAAACCAGACAATGTTCTTTTT...ATGTTCTTGTGAGTGGAGAATGGAACTCAGCTTAGCCTTGACCCCAGGTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR TCA 90 bp | TCCGGGGATCCATCCCATAATCAGCTTCCAAAGGCTGACATCATTGTATACACTGTCTCTAGCTGCATATaGATCAGAAAATGTCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: SGDPSHNQLPKADIIVYTVSSCI*IRKCPS Trigger: ACTAGGACATTTTCTGATTCATATGCAGCTAGAGAC...AGTGTATACAATGATGTCAGCCTTTGGAAGCTGATTATGGGATGGATCCCCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGTCTCTCTTTGTTCAATaGTGTAAATCACCTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: IAKSWKEPRCPSTEEWIQSLFVQ*CKSPGR Trigger: TCTTCCAGGTGATTTACAGCATTGAACAAAGAGAGA...CTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTTTGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCAGGACATGCACATGTTaGACAACAATCAATGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: KFCDWCNGPPLTKYTVNARTCTC*TTINAD Trigger: GTCTGCATTGATTGTTGTGCAACATGTGCATGTCCT...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCAAACACAGAAGTGGATaGTCACAGTCAGCTATCACA | + |
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Preference number: 2 (lower is better) Translates to: KFCDWCNGPPLTKYTVNAKHRSG*SQSAIT Trigger: TGTGATAGCTGACTGTGAGCATCCACTTCTGTGTTT...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACTGACCCAAGTTGCATTTGTGTCTaGTATGCTCCTATAATGATG | + |
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Preference number: 2 (lower is better) Translates to: LPFGCLTWEHLEVSTTDPSCICV*YAPIMM Trigger: CATCATTATAGGAGCATAGCAGACACAAATGCAACT...TGGGTCAGTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACAAATCCCTTCAAGAGTaGCAAGTGGAAGAGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: KVWTLCPFLELGTKHPWNKSLQE*QVEEMS Trigger: AGACATCTCTTCCACTTGCCACTCTTGAAGGGATTT...GTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CCA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGGCCAATAAGTGGATGTaGTTGGCTGGTTGGGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: VIALYRVVIFSCTEFLGLANKWM*LAGWGS Trigger: ACTCCCCCAACCAGCCAACCACATCCACTTATTGGC...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACCTAGCAATATTTTGCTaGAAGGACCCAGATATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: KVWTLCPFLELGTKHPWNLAIFC*KDPDIA Trigger: AGCTATATCTGGGTCCTTTCAGCAAAATATTGCTAG...GTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCCTAGCAATATTTTGCTaGAAGGACCCAGATATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: KFCDWCNGPPLTKYTVNALAIFC*KDPDIA Trigger: AGCTATATCTGGGTCCTTTCAGCAAAATATTGCTAG...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACTTCAAGAGTGGCAAGTaGAAGAGATGTCTATACCAA | + |
|
Preference number: 2 (lower is better) Translates to: KVWTLCPFLELGTKHPWNFKSGK*KRCLYQ Trigger: TTGGTATAGACATCTCTTCCACTTGCCACTCTTGAA...GTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CCA 90 bp | CCACAGCTTCATATTTCTGATTATATGAGGAACCAGTCACAAGCAGGGTTCACAAAATCCCTTCAAGAGTaGCAAGTGGAAGAGATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PQLHISDYMRNQSQAGFTKSLQE*QVEEMS Trigger: AGACATCTCTTCCACTTGCCACTCTTGAAGGGATTT...TGTGAACCCTGCTTGTGACTGGTTCCTCATATAATCAGAAATATGAAGCTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCTCTCTCTTTGTTCAATaGTGTAAATCACCTGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KFCDWCNGPPLTKYTVNASLFVQ*CKSPGR Trigger: TCTTCCAGGTGATTTACAGCATTGAACAAAGAGAGA...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACAGCTTCATATTTCTGATTATATGAGGAACCAGTCACAAGCAGGGTTCACATGTAGGAAGGACACATaGTCTACTATGTTCATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PQLHISDYMRNQSQAGFTCRKDT*STMFIA Trigger: TGCTATGAACATAGTAGAGCATGTGTCCTTCCTACA...TGTGAACCCTGCTTGTGACTGGTTCCTCATATAATCAGAAATATGAAGCTGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGGGAGCTAAAGGAATCTaGAATCCTACAGGTGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: VIALYRVVIFSCTEFLGLGAKGI*NPTGGT Trigger: TGTTCCACCTGTAGGATTGCAGATTCCTTTAGCTCC...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCAAAAAGAACATTGTCTaGTTTCCTTCTAGAAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: KFCDWCNGPPLTKYTVNAKKNIV*FPSRNP Trigger: AGGGTTTCTAGAAGGAAACCAGACAATGTTCTTTTT...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CAA 90 bp | ATTAAAAATATCAGCCATATGTGCCACTCGGAATCCAGGCCATCCTaGTTCATGCTGTATATACAATTATACATCTCCTGTCTACCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: IKNISHMCHSESRPS*FMLYIQLYISCLPF Trigger: AAAGGGTAGACAGGAGATGTATAATTGTATATACAGCATGAACAAGGATGGCCTGGATTCCGAGTGGCACATATGGCTGATATTTTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CAA 90 bp | AGACACAAAGGATGTAATAGCTTTATACAGGGTTGTGATATTTTCTaGTACAGAGTTCTTGGGGTTGTCACCACATTAGATCCAGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: RHKGCNSFIQGCDIF*YRVLGVVTTLDPDV Trigger: CACATCTGGATCTAATGTGGTGACAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTACATCCTTTGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGGCAGATTCATATCTTTGCACAGTTTTCACCATAACTGGGCTGAACAAATGGTCTCTAGCTGCATATaGATCAGAAAATGTCCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: LGRFISLHSFHHNWAEQMVSSCI*IRKCPS Trigger: ACTAGGACATTTTCTGATTCATATGCAGCTAGAGAC...CATTTGTTCAGCCCAGTTATGGTGAAAACTGTGCAAAGATATGAATCTGCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGCATTTGTGTCTGCTATaGTCCTATAATGATGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: VIALYRVVIFSCTEFLGLHLCLL*SYNDDV Trigger: CACATCATCATTATAGGAGCATAGCAGACACAAATG...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CAA 90 bp | TTGTTCACCAATAGATTTAAAGGTCAATATGCTTACCCAATAAGTTaGAACTCTAACCTTGCTGATGTAACCTGTCCTCCCAAAAAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: LFTNRFKGQYAYPIS*NSNLADVTCPPKKY Trigger: ATACTTTTTGGGAGGACAGGTTACATCAGCAAGGTTAGAGTTCAAACTTATTGGGTAAGCATATTGACCTTTAAATCTATTGGTGAACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CCA 72 bp | TATGCCTCAATACAGGGGAACGCCAGGGCCAATAAGTaGATGTGGTTGGCTGGTTGGGGGAGTGGGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YASIQGNARANK*MWLAGWGSGCR Trigger: CCTGCACCCACTCCCCCAACCAGCCAACCACATCCACTTATTGGCCCTGGCGTTCCCCTGTATTGAGGCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CCA 72 bp | AACGCCAGGGCCAATAAGTGGATGTGGTTGGCTGGTTaGGGGAGTGGGTGCAGGAGCATATGGGGGACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: NARANKWMWLAG*GSGCRSIWGTF Trigger: AAAAGTCCCCCATATGCTCCTGCACCCACTCCCCCAACCAGCCAACCACATCCACTTATTGGCCCTGGCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CCA 72 bp | TCAATACAGGGGAACGCCAGGGCCAATAAGTGGATGTaGTTGGCTGGTTGGGGGAGTGGGTGCAGGAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SIQGNARANKWM*LAGWGSGCRSI Trigger: TATGCTCCTGCACCCACTCCCCCAACCAGCCAACCACATCCACTTATTGGCCCTGGCGTTCCCCTGTATTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCGGAAAGAGAGGCCCTTaGGTCTTGCAAACTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSGKRGP*VLQTLY Trigger: ATATAAAGTTTGCAAGACCAAAGGGCCTCTCTTTCC...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGGAACGCCAGGGCCAATAAGTGGATGTGGTTGGCTGGTTGGGGGAGTGGGTCTCTCTCTCTCTCTTaGTTCAATGCTGTAAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: QGNARANKWMWLAGWGSGSLSLS*FNAVNH Trigger: GTGATTTACAGCATTGAACAAAGAGAGAGAGAGAGA...CCCACTCCCCCAACCAGCCAACCACATCCACTTATTGGCCCTGGCGTTCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCAATTCCATTTACAGGTaGTCATCACTATCCCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSNSIYR*SSLSPI Trigger: TATGGGGGATAGTGATGACAACCTGTAAATGGAATT...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCGGTTGTGATATTTTCTaGTACAGAGTTCTTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSGCDIF*YRVLGV Trigger: AACCCCAAGAACTCTGTACAAGAAAATATCACAACC...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR TCA 72 bp | CAGGCTTCCACCTCCCACCTGGGGTCAAGGCTAAGCTaGGTTCCATTCTCCACTCACAAGAACATTCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QASTSHLGSRLS*VPFSTHKNILE Trigger: CTCAAGAATGTTCTTGTGAGTGGAGAATGGAACTCAGCTTAGCCTTGACCCCAGGTGGGAGGTGGAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR GCA 72 bp | GAGACTATGCCGGAGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATCACAGGGAACCCAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ETMPEPSKHRSG*SQSAITGNPME Trigger: CTCCATTGGGTTCCCTGTGATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCTCCGGCATAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACGATGTGGTTGGCTGGTaGGGGGAGTGGGTGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KVWTLCPFLELGTKHPWNDVVGW*GEWVQE Trigger: CTCCTGCACCCACTCCCCCAACCAGCCAACCACATC...GTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAATAAGTGGATGTGGTaGGCTGGTTGGGGGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IAKSWKEPRCPSTEEWIQNKWMW*AGWGSG Trigger: CCCACTCCCCCAACCAGCCAACCACATCCACTTATT...CTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTTTGGCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR TCA 72 bp | CAGGAGCATGAGGGAACGCCTACAGTGTCATGTGGGTaGATTATGACCATTGAGGTTCAGACCTCAGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QEHEGTPTVSCG*IMTIEVQTSAQ Trigger: TTGAGCTGAGGTCTGAACCTCAATGGTCATAATTCACCCACATGACACTGTAGGCGTTCCCTCATGCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCACCTGGGGTCAAGGCTAAGCTGAGTTCCATTCTCCACTCACAAGAACATTTCCAGTCTCACTTCTaGCTGCCACAGTCACATATT | + |
|
Preference number: 3 (lower is better) Translates to: LPPGVKAKLSSILHSQEHFQSHF*LPQSHI Trigger: AATATGTGACTGTGGCAGCAAGAAGTGAGACTGGAA...ATGTTCTTGTGAGTGGAGAATGGAACTCAGCTTAGCCTTGACCCCAGGTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGGATGTGGTTGGCTGGTaGGGGGAGTGGGTGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VIALYRVVIFSCTEFLGLDVVGW*GEWVQE Trigger: CTCCTGCACCCACTCCCCCAACCAGCCAACCACATC...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACTGACCCAAGAGGCCCTTTGGTCTaGCAAACTTTATATGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPFGCLTWEHLEVSTTDPRGPLV*QTLYAS Trigger: TGAGGCATATAAAGTTTGCAAGACCAAAGGGCCTCT...TGGGTCAGTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR TCA 72 bp | ACCCATGGAACAGGTTACAGAGACAAAGTTTGGAGCTaGGACGAAAGGATGGACCATCTAGAGACTGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: THGTGYRDKVWS*DERMDHLETAV Trigger: TACAGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACCTGTTCCATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR GCA 72 bp | AGTCAGCCATCATTGGAAAGAGAGGCCCTTTGGTCTTaGAAACTTTATATGCCTCAATACAGGGGAACGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQPSLEREALWS*KLYMPQYRGTP Trigger: TGGCGTTCCCCTGTATTGAGGCATATAAAGTTTGCAAGACCAAAGGGCCTCTCTTTCCAATGATGGCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR GCA 72 bp | ATCCAGATGTGCTGGGGATGCAGTTGCATTTGTGTCTaGTATGCTCCTATAATGATGATGTGCCCAGGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IQMCWGCSCICV*YAPIMMMCPGD Trigger: ATCACCTGGGCACATCATCATTATAGGAGCATAGCAGACACAAATGCAACTGCATCCCCAGCACATCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACTGACCCAGGAAAGAGAGGCCCTTaGGTCTTGCAAACTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: LPFGCLTWEHLEVSTTDPGKRGP*VLQTLY Trigger: ATATAAAGTTTGCAAGACCAAAGGGCCTCTCTTTCC...TGGGTCAGTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CCA 72 bp | AGAACATTGTCTGGTTTCCTTCTAGAAACCCTACAATaGATCAGGACAACCCTTCTAGCTCCAGTCAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RTLSGFLLETLQ*IRTTLLAPVSM Trigger: CATGCTGACTGGAGCTAGAAGGGTTGTCCTGATCCATTGTAGGGTTTCTAGAAGGAAACCAGACAATGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CCA 72 bp | TGTTTGTCTAGGTGTGTCTGTGTTATGGACAGGGACTaGAGCCTATTTTCACATATGCACCTGAGATTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CLSRCVCVMDRD*SLFSHMHLRFQ Trigger: CTGGAATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCTGTCCATAACACAGACACACCTAGACAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGAATAAGTGGATGTGGTaGGCTGGTTGGGGGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VIALYRVVIFSCTEFLGLNKWMW*AGWGSG Trigger: CCCACTCCCCCAACCAGCCAACCACATCCACTTATT...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CCA 72 bp | CTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATaGAACAGGTTACAGAGACAAAGTTTGGAGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCPFLELGTKHP*NRLQRQSLELR Trigger: TCTCAGCTCCAAACTTTGTCTCTGTAACCTGTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCGGGGATCCATCCCATAATCAGCTTCCAAAGGCTGACATCATTGTATACACTTCTCTCTCTCTCTCTTaGTTCAATGCTGTAAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: SGDPSHNQLPKADIIVYTSLSLS*FNAVNH Trigger: GTGATTTACAGCATTGAACAAAGAGAGAGAGAGAGA...AGTGTATACAATGATGTCAGCCTTTGGAAGCTGATTATGGGATGGATCCCCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR GCA 72 bp | AACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTaGCCCTTCTTAGAATTGGGAACAAAACACCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: NSRRMKTKVWTL*PFLELGTKHPW Trigger: CCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR GCA 72 bp | ATATGTGCCACTCGGAATCCAGGCCATCCTTGTTCATaGTGTATATACAATTATACATCTCCTGTCTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: ICATRNPGHPCS*CIYNYTSPVYP Trigger: AGGGTAGACAGGAGATGTATAATTGTATATACAGCATGAACAAGGATGGCCTGGATTCCGAGTGGCACATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGATCTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACCTATTTTCTCAGTGCTaGAGAGATGGATCAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: LRSAFWVSYLGTSRSKYHLFSQC*RDGSRF Trigger: AAATCTTGATCCATCTCTCAAGCACTGAGAAAATAG...GTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAGATCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR TCA 72 bp | AGCTCCAGTATTTCTCTGTGTAGTTTTTGGCTTGGATaGCTTTTCATCGGTGAGAGTGGGATAACGAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSISLCSFWLG*LFIGESGITKS Trigger: AGATTTCGTTATCCCACTCTCACCGATGAAAAGTCATCCAAGCCAAAAACTACACAGAGAAATACTGGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR CCA 72 bp | AGTCTCACTTCTTGCTGCCACAGTCACATATTATCTTaGGGAGACACAAAGGATGTAATAGCTTTATACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLTSCCHSHILS*GDTKDVIALYR Trigger: CCTGTATAAAGCTATTACATCCTTTGTGTCTCCCCAAGATAATATGTGACTGTGGCAGCAAGAAGTGAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCTACACTAGCAATATTTaGCTGAAAGGACCCAGATAT | + |
|
Preference number: 3 (lower is better) Translates to: KFCDWCNGPPLTKYTVNAYTSNI*LKGPRY Trigger: ATATCTGGGTCCTTTCAGCAAAATATTGCTAGTGTA...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGGGGATGCAGTTGCATTaGTGTCTGCTATGCTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: VIALYRVVIFSCTEFLGLGMQLH*CLLCSY Trigger: ATAGGAGCATAGCAGACACAAATGCAACTGCATCCC...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGGCATATGGGGGACTTTaGGGAAAGCATTGGAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: VIALYRVVIFSCTEFLGLAYGGL*GKHWKC Trigger: ACATTTCCAATGCTTTCCCAAAAGTCCCCCATATGC...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CAA 90 bp | CCACAGCTTCATATTTCTGATTATATGAGGAACCAGTCACAAGCAGGGTTCACATACACTAGCAATATTTaGCTGAAAGGACCCAGATAT | + |
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Preference number: 3 (lower is better) Translates to: PQLHISDYMRNQSQAGFTYTSNI*LKGPRY Trigger: ATATCTGGGTCCTTTCAGCAAAATATTGCTAGTGTA...TGTGAACCCTGCTTGTGACTGGTTCCTCATATAATCAGAAATATGAAGCTGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR TCA 72 bp | AGGCTGACATCATTGTATACACTAGCAATATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: RLTSLYTLAIFC*KDPDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATATTGCTAGTGTATACAATGATGTCAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR GCA 72 bp | TTATTTATAATAGCCAAAAGCTGGAAAGAACCCAGATaGCCCTCAACAGAGGAATGGATACAGAAAATGTGG | + |
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Preference number: 3 (lower is better) Translates to: LFIIAKSWKEPR*PSTEEWIQKMW Trigger: CCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTTTGGCTATTATAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CCA 72 bp | GCATATGAATCAGAAAATGTCCTAGTCAGCCATCATTaGAAAGAGAGGCCCTTTGGTCTTGCAAACTTTATA | + |
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Preference number: 3 (lower is better) Translates to: AYESENVLVSHH*KERPFGLANFI Trigger: TATAAAGTTTGCAAGACCAAAGGGCCTCTCTTTCCAATGATGGCTGACTAGGACATTTTCTGATTCATATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR GCA 72 bp | TCTGGAAAGTCCCAGGTAGAGTTCAAAAGTGCATCATaGTTGTTCACCAATAGATTTAAAGGTCAATATGCT | + |
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Preference number: 3 (lower is better) Translates to: SGKSQVEFKSAS*LFTNRFKGQYA Trigger: AGCATATTGACCTTTAAATCTATTGGTGAACAAGCATGATGCACTTTTGAACTCTACCTGGGACTTTCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CAA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGAATTCCATTTACAGGTaGTCATCACTATCCCCCATA | + |
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Preference number: 3 (lower is better) Translates to: VIALYRVVIFSCTEFLGLNSIYR*SSLSPI Trigger: TATGGGGGATAGTGATGACAACCTGTAAATGGAATT...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR TCA 72 bp | TACTCTGAAGTAACATCTATCCTGGGTAATGAGGTATaGTTTTTGGATAGAGCACCATTTCCTGACACTATT | + |
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Preference number: 3 (lower is better) Translates to: YSEVTSILGNEV*FLDRAPFPDTI Trigger: AATAGTGTCAGGAAATGGTGCTCTATCCAAAAATCATACCTCATTACCCAGGATAGATGTTACTTCAGAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR-3UTR CAA 90 bp | GTAATAGCTTTATACAGGGTTGTGATATTTTCTTGTACAGAGTTCTTGGGGTTGCTATTTTCTCAGTGCTaGAGAGATGGATCAAGATTT | + |
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Preference number: 3 (lower is better) Translates to: VIALYRVVIFSCTEFLGLLFSQC*RDGSRF Trigger: AAATCTTGATCCATCTCTCAAGCACTGAGAAAATAG...CAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CCA 72 bp | AGAAAAGTTTGTAAAAATCCCTTCAAGAGTGGCAAGTaGAAGAGATGTCTATACCAATGTAATTGGCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: RKVCKNPFKSGK*KRCLYQCNWLK Trigger: CTTTAGCCAATTACATTGGTATAGACATCTCTTCCACTTGCCACTCTTGAAGGGATTTTTACAAACTTTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR TCA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCCCTCCCATAGCACCCTaGAACACTGCATCTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSPPIAP*NTASLR Trigger: CCTGAGAGATGCAGTGTTTCAGGGTGCTATGGGAGG...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CCA 90 bp | GCTTCTCTTGTGAGGGCTGTGGGAGGTGGTACCTTAGGCAGGGGCCGGAGTTCCAGCTGCTACTGTCTTTaGCAATCCTTTTGTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ASLVRAVGGGTLGRGRSSSCYCL*QSFCKK Trigger: CTTCTTACAAAAGGATTGCCAAAGACAGTAGCAGCT...GGAACTCCGGCCCCTGCCTAAGGTACCACCTCCCACAGCCCTCACAAGAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR TCA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCCCTCCCATAGCACCCTaGAACACTGCATCTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KFCDWCNGPPLTKYTVNAPPIAP*NTASLR Trigger: CCTGAGAGATGCAGTGTTTCAGGGTGCTATGGGAGG...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CCA 90 bp | ACAGAAAAGTTTGTAAAAATCCCTTCAAGAGTGGCAAGTGGAAGAGATGTCTATGACTGCTGGTGCAGATaGAGAGGCCATGGGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: TEKFVKIPSRVASGRDVYDCWCR*RGHGPP Trigger: GGGTGGCCCATGGCCTCTCCATCTGCACCAGCAGTC...ATAGACATCTCTTCCACTTGCCACTCTTGAAGGGATTTTTACAAACTTTTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CAA 72 bp | CTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTTaGTTCAATGCTGTAAATCACCTGGAAGACTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LSLSPSLSLSLS*FNAVNHLEDCL Trigger: CAGACAGTCTTCCAGGTGATTTACAGCATTGAACAAAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CAA 72 bp | AGATCAGCCTGCAATTCCCCACAGCCTATGATTCTCTaGATTTCCTGGTTGTCTCTTATGCCAAACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RSACNSPQPMIL*ISWLSLMPNSP Trigger: TGGGGAGTTTGGCATAAGAGACAACCAGGAAATCAAGAGAATCATAGGCTGTGGGGAATTGCAGGCTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CCA 90 bp | ATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGTTCTGTAGAGAAGGTTaGAGTTCTGAAGGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: IAKSWKEPRCPSTEEWIQFCREG*SSEGRG Trigger: TCCTCTACCTTCAGAACTCCAACCTTCTCTACAGAA...CTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTTTGGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CCA 90 bp | ATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAGCTGCTACTGTCTTTaGCAATCCTTTTGTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: IAKSWKEPRCPSTEEWIQSCYCL*QSFCKK Trigger: CTTCTTACAAAAGGATTGCCAAAGACAGTAGCAGCT...CTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTTTGGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CAA 72 bp | TTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTaGCTGCCACAGTCACATATTATCTTGGGGAGACAC | + |
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Preference number: 4 (lower is better) Translates to: FSHMHLRFQSHF*LPQSHIILGRH Trigger: GTGTCTCCCCAAGATAATATGTGACTGTGGCAGCAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CCA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCTTCTGTAGAGAAGGTTaGAGTTCTGAAGGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: KFCDWCNGPPLTKYTVNAFCREG*SSEGRG Trigger: TCCTCTACCTTCAGAACTCCAACCTTCTCTACAGAA...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACTGACCCAAAATTCTTCAGTATTTaGCACCAATGTATTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LPFGCLTWEHLEVSTTDPKFFSI*HQCIVP Trigger: AGGGACAATACATTGGTGGCAAATACTGAAGAATTT...TGGGTCAGTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CCA 90 bp | ATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGTTTGTAAAAGCCAAGTaGATGAGAATAAGCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: IAKSWKEPRCPSTEEWIQFVKAK*MRISCT Trigger: TGTACAGCTTATTCTCATCCACTTGGCTTTTACAAA...CTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTTTGGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CAA 72 bp | CAGTCTCACTTCTTGCTGCCACAGTCACATATTATCTaGGGGAGACACAAAGGATGTAATAGCTTTATACAG | + |
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Preference number: 4 (lower is better) Translates to: QSHFLLPQSHII*GRHKGCNSFIQ Trigger: CTGTATAAAGCTATTACATCCTTTGTGTCTCCCCAAGATAATATGTGACTGTGGCAGCAAGAAGTGAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CCA 90 bp | CTGAGATCTGCCTTTTGGGTGTCTTACTTGGGAACATCTCGAAGTAAGTACCACTTTGTAAAAGCCAAGTaGATGAGAATAAGCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: LRSAFWVSYLGTSRSKYHFVKAK*MRISCT Trigger: TGTACAGCTTATTCTCATCCACTTGGCTTTTACAAA...GTGGTACTTACTTCGAGATGTTCCCAAGTAAGACACCCAAAAGGCAGATCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR GCA 90 bp | AAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACAAATTCTTCAGTATTTaGCACCAATGTATTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: KVWTLCPFLELGTKHPWNKFFSI*HQCIVP Trigger: AGGGACAATACATTGGTGGCAAATACTGAAGAATTT...GTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CAA 72 bp | TTCCACAATTCTCTGTTAGACCTATTTTCTCAGTGCTaGAGAGATGGATCAAGATTTAAGAACATTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FHNSLLDLFSQC*RDGSRFKNIVW Trigger: CCAGACAATGTTCTTAAATCTTGATCCATCTCTCAAGCACTGAGAAAATAGGTCTAACAGAGAATTGTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CAA 72 bp | AGATTCACTCAACTCAATTTAGGCAGATTCATATCTTaGCACAGTTTTCACCATAACTGGGCTGAACAAATG | + |
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Preference number: 4 (lower is better) Translates to: RFTQLNLGRFIS*HSFHHNWAEQM Trigger: CATTTGTTCAGCCCAGTTATGGTGAAAACTGTGCAAAGATATGAATCTGCCTAAATTGAGTTGAGTGAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| 3UTR CAA 72 bp | GGATGTAATAGCTTTATACAGGGTTGTGATATTTTCTaGTACAGAGTTCTTGGGGTTGTCACCACATTAGAT | + |
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Preference number: 4 (lower is better) Translates to: GCNSFIQGCDIF*YRVLGVVTTLD Trigger: ATCTAATGTGGTGACAACCCCAAGAACTCTGTACAAGAAAATATCACAACCCTGTATAAAGCTATTACATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS CCA 90 bp | CACTTTGAGCAGCTCTCAGCTCAGGGGGAGTTCTGTAGAGAAGGTTaGAGTTCTGAAGGTAGAGGACATGCTGGTGGTGCTTGTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: HFEQLSAQGEFCREG*SSEGRGHAGGACGE Trigger: TTCTCCACAAGCACCACCAGCATGTCCTCTACCTTCAGAACTCCAACCTTCTCTACAGAACTCCCCCTGAGCTGAGAGCTGCTCAAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095961.2 ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CAA 90 bp | AATAAGTGGATGTGGTTGGCTGGTTGGGGGAGTGGGTGCAGGAGCATATGGGGGTTTGCCACCAATGTATaGTCCCTTGAAGAGAGACTA | + |
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Preference number: 5 (lower is better) Translates to: NKWMWLAGWGSGCRSIWGFATNV*SLEERL Trigger: TAGTCTCTCTTCAAGGGACAATACATTGGTGGCAAA...CCCCCATATGCTCCTGCACCCACTCCCCCAACCAGCCAACCACATCCACTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CAA 90 bp | AAGTTCTGTGACTGGTGCAATGGTCCCCCATTGACTAAATACACAGTAAATGCCGAAATTCTTCAGTATTaGCCACCAATGTATTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KFCDWCNGPPLTKYTVNAEILQY*PPMYCP Trigger: GGGACAATACATTGGTGGCAAATACTGAAGAATTTC...GGCATTTACTGTGTATTTAGTCAATGGGGGACCATTGCACCAGTCACAGAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAAAGTTTGTAAAAATCCCTTCAAGAGTGGCAAGTGGAAGAGATGTCTATTTTGCCACCAATGTATaGTCCCTTGAAGAGAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: TEKFVKIPSRVASGRDVYFATNV*SLEERL Trigger: TAGTCTCTCTTCAAGGGACAATACATTGGTGGCAAA...ATAGACATCTCTTCCACTTGCCACTCTTGAAGGGATTTTTACAAACTTTTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS GCA 72 bp | GTAGCCACTGGCCCCTCCCATAGCACCCTGAAACACTaGATCTCTCAGGACCATGAGAGTGAGAAATATCCA | + |
|
Preference number: 6 (lower is better) Translates to: VATGPSHSTLKH*ISQDHESEKYP Trigger: TGGATATTTCTCACTCTCATGGTCCTGAGAGATGCAGTGTTTCAGGGTGCTATGGGAGGGGCCAGTGGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095961.2 ENSMUST00000227038.2 ENSMUST00000227265.2 |
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| CDS CCA 72 bp | CGCTGTGACATATTCAGATCTGTACTTGTGATAGAATaGATTAGGTTCATACTCATTAAAGCATTGAGTATC | + |
|
Preference number: 6 (lower is better) Translates to: RCDIFRSVLVIE*IRFILIKALSI Trigger: GATACTCAATGCTTTAATGAGTATGAACCTAATCCATTCTATCACAAGTACAGATCTGAATATGTCACAGCG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095961.2 ENSMUST00000227038.2 ENSMUST00000227265.2 |
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