Pregenerated sensors for VMN1R207 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000084136Ensembl transcript IDs: ENSMUST00000119931.3, ENSMUST00000236800.2, ENSMUST00000237024.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGAACCCAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSCETMPGPSKHRSG*SQSAIGWITGNPME Trigger: CTCCATTGGGTTCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR TCA 90 bp | GAACAAAACACCCATGGAACAGGTTACAGAGACAAAGTTTGGAGCTaGGACGAAAGGATGGACCATCTAGAGACTGCCGTATCCGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: EQNTHGTGYRDKVWS*DERMDHLETAVSGD Trigger: ATCCCCGGATACGGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACCTGTTCCATGGGTGTTTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR TCA 90 bp | AGCTTCCAAAGGCTGACATCATTGTATACACTAGCAAGATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: SFQRLTSLYTLARFC*KDPDIAVSCETMPG Trigger: CCCCGGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATACAATGATGTCAGCCTTTGGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR CCA 90 bp | GTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATaGAACAGGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: VWTLCPFLELGTKHP*NRLQRQSLELRRKD Trigger: ATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACCTGTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR CCA 90 bp | TACTCAGCTATTAGAAAGAATGAATTTATGAAATTCCTAGGCAAATaGATGGGCCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCA | + |
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Preference number: 1 (lower is better) Translates to: YSAIRKNEFMKFLGK*MGLEGIILSEVTQS Trigger: TGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGCCCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTCTAATAGCTGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR CCA 90 bp | TGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CSTMFIAALFIIARS*KEPRCPSTEEWIQK Trigger: TTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR GCA 90 bp | ATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATaGCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTAC | + |
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Preference number: 1 (lower is better) Translates to: IAALFIIARSWKEPR*PSTEEWIQKMWYIY Trigger: GTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR GCA 90 bp | ATATCAGCCATATGTGCCACTCGGAATCCAGGCCATCCTTGTTCATaGTGTATATACAATTATACATCTCCTGTCTACCCTTTATTAATT | + |
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Preference number: 1 (lower is better) Translates to: ISAICATRNPGHPCS*CIYNYTSPVYPLLI Trigger: AATTAATAAAGGGTAGACAGGAGATGTATAATTGTATATACAGCATGAACAAGGATGGCCTGGATTCCGAGTGGCACATATGGCTGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR CCA 90 bp | AAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTaGTACATTTACACAATGGAGTACTACTCAGCTATTAGAAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: KEPRCPSTEEWIQKM*YIYTMEYYSAIRKN Trigger: ATTCTTTCTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGGATCACAGGGAACCCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAGTGGATGTGGTTGGGTaGTTGGGGGAGTGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GWITGNPMEELEKVTKELVDVVG*LGEWVQ Trigger: CTGCACCCACTCCCCCAACCACCCAACCACATCCAC...TAGCTCCTTGGTTACTTTCTCTAGCTCCTCCATTGGGTTCCCTGTGATCCATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCCGTGTGGATGTGGTTGGGTaGTTGGGGGAGTGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QRQSLELRRKDGPSRDCRVDVVG*LGEWVQ Trigger: CTGCACCCACTCCCCCAACCACCCAACCACATCCAC...ACGGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGACTGGAGCCTATTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTTGGGGTGGTTGGGGGAGTaGGTGCAGGAACATGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RDWSLFSHMHLRFQSHFLGWLGE*VQEHVG Trigger: CCCCACATGTTCCTGCACCCACTCCCCCAACCACCC...CAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAATACAGGGGAACACTAGGGCCAAGAAGTGGATGTGGTTGGGTGGTTGGGTTCAAGAGTGGCAAGTaGAGGAGATGTCTATACCAA | + |
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Preference number: 2 (lower is better) Translates to: SQYRGTLGPRSGCGWVVGFKSGK*RRCLYQ Trigger: TTGGTATAGACATCTCCTCCACTTGCCACTCTTGAA...CCCAACCACCCAACCACATCCACTTCTTGGCCCTAGTGTTCCCCTGTATTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAATACAGGGGAACACTAGGGCCAAGAAGTGGATGTGGTTGGGTGGTTGGGCTAGAAACCCTACAATaGATCAGGACAACCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SQYRGTLGPRSGCGWVVGLETLQ*IRTTLL Trigger: TAGAAGGGTTGTCCTGATCCATTGTAGGGTTTCTAG...CCCAACCACCCAACCACATCCACTTCTTGGCCCTAGTGTTCCCCTGTATTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTATTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTTGCTGCCACAGGGGTGCAGGAACATGTaGGGGACTTTTGGGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLFSHMHLRFQSHFLLPQGCRNM*GTFGKA Trigger: TGCTTTCCCAAAAGTCCCCCACATGTTCCTGCACCC...CTGTGGCAGCAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAATAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | ATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCAGGGTGGTTGGGGGAGTaGGTGCAGGAACATGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: IILSEVTQSQKNSHDMYSGWLGE*VQEHVG Trigger: CCCCACATGTTCCTGCACCCACTCCCCCAACCACCC...TGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAATACAGGGGAACACTAGGGCCAAGAAGTGGATGTGGTTGGGTGGTTGGGTCTCTCTCAGTTCAATaGTGTAAATCACCTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SQYRGTLGPRSGCGWVVGSLSVQ*CKSPGR Trigger: TCTTCCAGGTGATTTACAGCATTGAACTGAGAGAGA...CCCAACCACCCAACCACATCCACTTCTTGGCCCTAGTGTTCCCCTGTATTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCATTTCCATGCTTCCAATCATGGTAGCCATAAAACCAGTTCCACAATTCTCGGTTGGGGGAGTGGGTaGAGGAACATGTGGGGGACT | + |
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Preference number: 2 (lower is better) Translates to: IHFHASNHGSHKTSSTILGWGSG*RNMWGT Trigger: AGTCCCCCACATGTTCCTGCACCCACTCCCCCAACC...GAGAATTGTGGAACTGGTTTTATGGCTACCATGATTGGAAGCATGGAAATGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGGATCACAGGGAACCCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAATCCCTTCAAGAGTaGCAAGTGGAGGAGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: GWITGNPMEELEKVTKELKSLQE*QVEEMS Trigger: AGACATCTCCTCCACTTGCCACTCTTGAAGGGATTT...TAGCTCCTTGGTTACTTTCTCTAGCTCCTCCATTGGGTTCCCTGTGATCCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTGTTATGGACAGGGACTGGAGCCTATTTTCACATATGCACCTGAGATTGGGTGCAGGAACATGTaGGGGACTTTTGGGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: CLCYGQGLEPIFTYAPEIGCRNM*GTFGKA Trigger: TGCTTTCCCAAAAGTCCCCCACATGTTCCTGCACCC...AATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCTGTCCATAACACAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTGTTATGGACAGGGACTGGAGCCTATTTTCACATATGCACCTGAGATTACTAGGGCCAAGAAGTaGATGTGGTTGGGTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: CLCYGQGLEPIFTYAPEITRAKK*MWLGGW Trigger: CCAACCACCCAACCACATCCACTTCTTGGCCCTAGT...AATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCTGTCCATAACACAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCAGTCTCACTTCTTGCTGCCACAGCTGCATATTATCTTGGGGAGACACAACTCACAGTCAGCTATTaGATGGATCACAGGGAACCC | + |
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Preference number: 2 (lower is better) Translates to: IPVSLLAATAAYYLGETQLTVSY*MDHREP Trigger: GGGTTCCCTGTGATCCATCCAATAGCTGACTGTGAG...TTGTGTCTCCCCAAGATAATATGCAGCTGTGGCAGCAAGAAGTGAGACTGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR CAA 90 bp | GAATTGGGAACAAAACACCCATGGAACAGGTTACAGAGACAAAGTTaGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCCGTATC | + |
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Preference number: 2 (lower is better) Translates to: ELGTKHPWNRLQRQS*ELRRKDGPSRDCRI Trigger: GATACGGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACCTGTTCCATGGGTGTTTTGTTCCCAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR CAA 90 bp | CTTGGAGTTGTCACCACATTAGATCCAGATGTGCTGGTGATGCAGTaGCATTTGTGTCTGCTATGCTCCTATAATGATGATGTGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LGVVTTLDPDVLVMQ*HLCLLCSYNDDVPR Trigger: CCTGGGCACATCATCATTATAGGAGCATAGCAGACACAAATGCAACTGCATCACCAGCACATCTGGATCTAATGTGGTGACAACTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | GGACACATGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGAGAAGTGGATGTGGTTaGGTGGTTGGGGGAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: GHMLYYVHSSLIYNSQKLRSGCG*VVGGVG Trigger: ACCCACTCCCCCAACCACCCAACCACATCCACTTCT...CAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCATGTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR CAA 90 bp | TGGAGCCTATTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTaGCTGCCACAGCTGCATATTATCTTGGGGAGACACAAGGATGTA | + |
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Preference number: 2 (lower is better) Translates to: WSLFSHMHLRFQSHF*LPQLHIILGRHKDV Trigger: TACATCCTTGTGTCTCCCCAAGATAATATGCAGCTGTGGCAGCAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAATAGGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGACTGGAGCCTATTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTTGGACCTATTTTCTCAGTaGTTGAGAGATGGATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RDWSLFSHMHLRFQSHFLDLFSQ*LRDGSG Trigger: TCCTGATCCATCTCTCAAGCACTGAGAAAATAGGTC...CAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGCCAAGAAGTGGATGTaGTTGGGTGGTTGGGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: TCSTMFIAALFIIARSWKAKKWM*LGGWGS Trigger: ACTCCCCCAACCACCCAACCACATCCACTTCTTGGC...TTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCAGTCTCACTTCTTGCTGCCACAGCTGCATATTATCTTGGGGAGACACAAGAGGCCCTTTGGTCTTaGAAACTTTATATGTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: IPVSLLAATAAYYLGETQEALWS*KLYMSQ Trigger: TTGAGACATATAAAGTTTGCAAGACCAAAGGGCCTC...TTGTGTCTCCCCAAGATAATATGCAGCTGTGGCAGCAAGAAGTGAGACTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAACTAGGGCCAAGAAGTaGATGTGGTTGGGTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: TCSTMFIAALFIIARSWKTRAKK*MWLGGW Trigger: CCAACCACCCAACCACATCCACTTCTTGGCCCTAGT...TTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTATTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTTGCTGCCACAGTATTTTCTCAGTGCTTaGGAGATGGATCAGGATTTA | + |
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Preference number: 2 (lower is better) Translates to: SLFSHMHLRFQSHFLLPQYFLSA*EMDQDL Trigger: TAAATCCTGATCCATCTCTCAAGCACTGAGAAAATA...CTGTGGCAGCAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAATAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGACTGGAGCCTATTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTTGTATTTTCTCAGTGCTTaGGAGATGGATCAGGATTTA | + |
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Preference number: 2 (lower is better) Translates to: RDWSLFSHMHLRFQSHFLYFLSA*EMDQDL Trigger: TAAATCCTGATCCATCTCTCAAGCACTGAGAAAATA...CAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGTGTTATGGACAGGGACTGGAGCCTATTTTCACATATGCACCTGAGATTACAGCTTCATATTTCTaGTTATATGAGGAACCAGCC | + |
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Preference number: 2 (lower is better) Translates to: CLCYGQGLEPIFTYAPEITASYF*LYEEPA Trigger: GGCTGGTTCCTCATATAATCAGAAATATGAAGCTGT...AATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCTGTCCATAACACAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTAAGGCACAGGACATGCACATGTTGCACAACAATCAATGCAGACAAAATTTCAAGAGTGGCAAGTaGAGGAGATGTCTATACCAA | + |
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Preference number: 2 (lower is better) Translates to: VSKAQDMHMLHNNQCRQNFKSGK*RRCLYQ Trigger: TTGGTATAGACATCTCCTCCACTTGCCACTCTTGAA...ATTTTGTCTGCATTGATTGTTGTGCAACATGTGCATGTCCTGTGCCTTAGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTGTTATGGACAGGGACTGGAGCCTATTTTCACATATGCACCTGAGATTCATGTGGGGGACTTTTaGGAAAGCATTGGAAATTTA | + |
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Preference number: 2 (lower is better) Translates to: CLCYGQGLEPIFTYAPEIHVGDF*ESIGNL Trigger: TAAATTTCCAATGCTTTCCCAAAAGTCCCCCACATG...AATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCTGTCCATAACACAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTGTTATGGACAGGGACTGGAGCCTATTTTCACATATGCACCTGAGATTGAAAGAGAGGCCCTTTaGTCTTGCAAACTTTATATG | + |
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Preference number: 2 (lower is better) Translates to: CLCYGQGLEPIFTYAPEIEREAL*SCKLYM Trigger: CATATAAAGTTTGCAAGACCAAAGGGCCTCTCTTTC...AATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCTGTCCATAACACAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTCCACAATTCTCTGTTAGACCTATTTTCTCAGTGCTTGAGAGATGGATCTCTCTCTCAGTTCAATaGTGTAAATCACCTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PVPQFSVRPIFSVLERWISLSVQ*CKSPGR Trigger: TCTTCCAGGTGATTTACAGCATTGAACTGAGAGAGA...GATCCATCTCTCAAGCACTGAGAAAATAGGTCTAACAGAGAATTGTGGAACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | ATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCAAAATCCCTTCAAGAGTaGCAAGTGGAGGAGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: IILSEVTQSQKNSHDMYSKSLQE*QVEEMS Trigger: AGACATCTCCTCCACTTGCCACTCTTGAAGGGATTT...TGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | GGACACATGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGCTAGAAACCCTACAATaGATCAGGACAACCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: GHMLYYVHSSLIYNSQKLLETLQ*IRTTLL Trigger: TAGAAGGGTTGTCCTGATCCATTGTAGGGTTTCTAG...CAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCATGTGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACAGGTTACAGAGACACTATACCAATGTAATTaGCTAAAGTCTTTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LPLLRIGNKTPMEQVTETLYQCN*LKSFSL Trigger: GAGAGAGAAAGACTTTAGCCAATTACATTGGTATAG...TGTCTCTGTAACCTGTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR-3UTR CCA 90 bp | ATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACATGTGGGGGACTTTTaGGAAAGCATTGGAAATTTA | + |
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Preference number: 2 (lower is better) Translates to: IILSEVTQSQKNSHDMYSHVGDF*ESIGNL Trigger: TAAATTTCCAATGCTTTCCCAAAAGTCCCCCACATG...TGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR GCA 72 bp | GAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: ETMPGPSKHRSG*SQSAIGWITGN Trigger: GTTCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR TCA 72 bp | ACCCATGGAACAGGTTACAGAGACAAAGTTTGGAGCTaGGACGAAAGGATGGACCATCTAGAGACTGCCGTA | + |
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Preference number: 3 (lower is better) Translates to: THGTGYRDKVWS*DERMDHLETAV Trigger: TACGGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACCTGTTCCATGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| 3UTR CCA 72 bp | AAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATaGATCACAGGGAACCCAATGGAGGAGCTAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KHRSGCSQSAIG*ITGNPMEELEK Trigger: TTTCTCTAGCTCCTCCATTGGGTTCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR GCA 72 bp | AGTCGGCCATCATTGGAAAGAGAGGCCCTTTGGTCTTaGAAACTTTATATGTCTCAATACAGGGGAACACTA | + |
|
Preference number: 3 (lower is better) Translates to: SRPSLEREALWS*KLYMSQYRGTL Trigger: TAGTGTTCCCCTGTATTGAGACATATAAAGTTTGCAAGACCAAAGGGCCTCTCTTTCCAATGATGGCCGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CCA 72 bp | AGAACATTGTCTGGTATTCTTCTAGAAACCCTACAATaGATCAGGACAACCCTTCTAGCTCCAGTCAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RTLSGILLETLQ*IRTTLLAPVSM Trigger: CATGCTGACTGGAGCTAGAAGGGTTGTCCTGATCCATTGTAGGGTTTCTAGAAGAATACCAGACAATGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR TCA 72 bp | AGGCTGACATCATTGTATACACTAGCAAGATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: RLTSLYTLARFC*KDPDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATACAATGATGTCAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR GCA 72 bp | TTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATaGCCCTCAACAGAGGAATGGATACAGAAAATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LFIIARSWKEPR*PSTEEWIQKMW Trigger: CCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CCA 72 bp | ATTAGAAAGAATGAATTTATGAAATTCCTAGGCAAATaGATGGGCCTGGAGGGCATCATCCTGAGTGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: IRKNEFMKFLGK*MGLEGIILSEV Trigger: TACCTCACTCAGGATGATGCCCTCCAGGCCCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTCTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACACATGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGACATGTGGGGGACTTTaGGGAAAGCATTGGAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: GHMLYYVHSSLIYNSQKLTCGGL*GKHWKF Trigger: AAATTTCCAATGCTTTCCCAAAAGTCCCCCACATGT...CAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCATGTGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACACATGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGAGAGGCCCTTTGGTCTaGCAAACTTTATATGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GHMLYYVHSSLIYNSQKLRGPLV*QTLYVS Trigger: TGAGACATATAAAGTTTGCAAGACCAAAGGGCCTCT...CAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCATGTGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCAAGAGGCCCTTTGGTCTaGCAAACTTTATATGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IILSEVTQSQKNSHDMYSRGPLV*QTLYVS Trigger: TGAGACATATAAAGTTTGCAAGACCAAAGGGCCTCT...TGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR GCA 72 bp | CAGTTCCACAATTCTCTGTTAGACCTATTTTCTCAGTaGTTGAGAGATGGATCAGGATTTAAGAACATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QFHNSLLDLFSQ*LRDGSGFKNIV Trigger: GACAATGTTCTTAAATCCTGATCCATCTCTCAAGCACTGAGAAAATAGGTCTAACAGAGAATTGTGGAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CCA 72 bp | AGAAAAGTTTATAAAAATCCCTTCAAGAGTGGCAAGTaGAGGAGATGTCTATACCAATGTAATTGGCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RKVYKNPFKSGK*RRCLYQCNWLK Trigger: CTTTAGCCAATTACATTGGTATAGACATCTCCTCCACTTGCCACTCTTGAAGGGATTTTTATAAACTTTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR TCA 90 bp | AGGGACTGGAGCCTATTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTTGCCTCCCATGGCACCCTaGAACACTGCATCTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDWSLFSHMHLRFQSHFLPPMAP*NTASLR Trigger: TCTCAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...CAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAATAGGCTCCAGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR TCA 90 bp | TTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAACAGGTTACAGAGACACCTCCCATGGCACCCTaGAACACTGCATCTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLLRIGNKTPMEQVTETPPMAP*NTASLR Trigger: TCTCAGAGATGCAGTGTTTCAGGGTGCCATGGGAGG...TGTCTCTGTAACCTGTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGAACCCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGAAAGAAGGAAGACACTTTaGGCAGCTCTCAGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITGNPMEELEKVTKELKERRKTL*AALSSG Trigger: CCCTGAGCTGAGAGCTGCTCAAAGTGTCTTCCTTCT...TTCCTTTAGCTCCTTGGTTACTTTCTCTAGCTCCTCCATTGGGTTCCCTGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR TCA 90 bp | GCTATTGGATGGATCACAGGGAACCCAATGGAGGAGCTAGAGAAAGTAACCAAGCTCAATTTCTCCCACTaGGCATGCCAACATTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: AIGWITGNPMEELEKVTKLNFSH*ACQHST Trigger: GGTTGAATGTTGGCATGCTCAGTGGGAGAAATTGAG...CTTGGTTACTTTCTCTAGCTCCTCCATTGGGTTCCCTGTGATCCATCCAATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAATACAGGGGAACACTAGGGCCAAGAAGTGGATGTGGTTGGGTGGTTGGGAACTGCTACTGTCTTTaGCAGTCCTTTTGTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQYRGTLGPRSGCGWVVGNCYCL*QSFCKK Trigger: CTTCTTACAAAAGGACTGCCAAAGACAGTAGCAGTT...CCCAACCACCCAACCACATCCACTTCTTGGCCCTAGTGTTCCCCTGTATTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCCGTTTCTGTAGAGAAGCTTaGAGCTCTGAAGGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRQSLELRRKDGPSRDCRFCREA*SSEGRR Trigger: TCTTCTACCTTCAGAGCTCCAAGCTTCTCTACAGAA...ACGGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAATACAGGGGAACACTAGGGCCAAGAAGTGGATGTGGTTGGGTGGTTGGGTTTGTAAAAGCCAAGTaGATGAGAATAAGGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SQYRGTLGPRSGCGWVVGFVKAK*MRIRCT Trigger: TGTACACCTTATTCTCATCCACTTGGCTTTTACAAA...CCCAACCACCCAACCACATCCACTTCTTGGCCCTAGTGTTCCCCTGTATTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CAA 72 bp | TTTTCACATATGCACCTGAGATTCCAGTCTCACTTCTaGCTGCCACAGCTGCATATTATCTTGGGGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSHMHLRFQSHF*LPQLHIILGRH Trigger: GTGTCTCCCCAAGATAATATGCAGCTGTGGCAGCAAGAAGTGAGACTGGAATCTCAGGTGCATATGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR TCA 90 bp | GGATGGATCACAGGGAACCCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAGGTTTCCCCACCAACTaGACATATAATTTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GWITGNPMEELEKVTKELGFPTN*TYNLQK Trigger: TTTCTGTAAATTATATGTTCAGTTGGTGGGGAAACC...TAGCTCCTTGGTTACTTTCTCTAGCTCCTCCATTGGGTTCCCTGTGATCCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR GCA 90 bp | ATTCCAGTCTCACTTCTTGCTGCCACAGCTGCATATTATCTTGGGGAGACACAATCTCAAACCAAAAACTaGTACTGTCTTTGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPVSLLAATAAYYLGETQSQTKN*YCLWQS Trigger: GGACTGCCAAAGACAGTAGCAGTTTTTGGTTTGAGA...TTGTGTCTCCCCAAGATAATATGCAGCTGTGGCAGCAAGAAGTGAGACTGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR GCA 90 bp | ATCACAGGGAACCCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGAATCTCAAACCAAAAACTaGTACTGTCTTTGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITGNPMEELEKVTKELKESQTKN*YCLWQS Trigger: GGACTGCCAAAGACAGTAGCAGTTTTTGGTTTGAGA...TTCCTTTAGCTCCTTGGTTACTTTCTCTAGCTCCTCCATTGGGTTCCCTGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CAA 72 bp | AAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGGAACAAAACACCCATGGAACAGGTTACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTKVWTLCPFLE*GTKHPWNRLQR Trigger: TCTCTGTAACCTGTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR TCA 90 bp | GCTATTGGATGGATCACAGGGAACCCAATGGAGGAGCTAGAGAAAGTAACCAAGGGTTTCCCCACCAACTaGACATATAATTTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AIGWITGNPMEELEKVTKGFPTN*TYNLQK Trigger: TTTCTGTAAATTATATGTTCAGTTGGTGGGGAAACC...CTTGGTTACTTTCTCTAGCTCCTCCATTGGGTTCCCTGTGATCCATCCAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR TCA 90 bp | GGACACATGCTCTACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGCTCAATTTCTCCCACTaGGCATGCCAACATTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GHMLYYVHSSLIYNSQKLLNFSH*ACQHST Trigger: GGTTGAATGTTGGCATGCTCAGTGGGAGAAATTGAG...CAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTAGAGCATGTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CAA 72 bp | ATCAGCCATATGTGCCACTCGGAATCCAGGCCATCCTaGTTCATGCTGTATATACAATTATACATCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISHMCHSESRPS*FMLYIQLYISC Trigger: ACAGGAGATGTATAATTGTATATACAGCATGAACAAGGATGGCCTGGATTCCGAGTGGCACATATGGCTGAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CAA 72 bp | GTCACCACATTAGATCCAGATGTGCTGGTGATGCAGTaGCATTTGTGTCTGCTATGCTCCTATAATGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTTLDPDVLVMQ*HLCLLCSYNDD Trigger: ATCATCATTATAGGAGCATAGCAGACACAAATGCAACTGCATCACCAGCACATCTGGATCTAATGTGGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTAAGGCACAGGACATGCACATGTTGCACAACAATCAATGCAGACAAAATAAGAATAAAAGGATGTaGCATGCAGACCTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKAQDMHMLHNNQCRQNKNKRM*HADLGL Trigger: AAGGCCAAGGTCTGCATGGCACATCCTTTTATTCTT...ATTTTGTCTGCATTGATTGTTGTGCAACATGTGCATGTCCTGTGCCTTAGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTAAGGCACAGGACATGCACATGTTGCACAACAATCAATGCAGACAAAATCAAGGGGCTAAAAGTTaGATAACCAAGGGTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSKAQDMHMLHNNQCRQNQGAKS*ITKGQK Trigger: TTTCTGACCCTTGGTTATGCAACTTTTAGCCCCTTG...ATTTTGTCTGCATTGATTGTTGTGCAACATGTGCATGTCCTGTGCCTTAGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CAA 72 bp | AAACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTaGCCCCTTCTTAGAATTGGGAACAAAACACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLKKNEDQSVDT*PLLRIGNKTPM Trigger: CATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTTCCACAATTCTCTGTTAGACCTATTTTCTCAGTGCTTGAGAGATGGATCAGGGTCAGAAATTCTTaGGTATTTGCCATCAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: PVPQFSVRPIFSVLERWIRVRNS*VFAINL Trigger: TAGATTGATGGCAAATACTCAAGAATTTCTGACCCT...GATCCATCTCTCAAGCACTGAGAAAATAGGTCTAACAGAGAATTGTGGAACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR GCA 90 bp | ATTGTATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGAAGAATAAAAGGATGTaGCATGCAGACCTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVYTSKILLKGPRYSCLLKNKRM*HADLGL Trigger: AAGGCCAAGGTCTGCATGGCACATCCTTTTATTCTT...CAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTTCTGTAGAGAAGCTTaGAGCTCTGAAGGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IVYTSKILLKGPRYSCLLFCREA*SSEGRR Trigger: TCTTCTACCTTCAGAGCTCCAAGCTTCTCTACAGAA...CAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CAA 72 bp | TTCCACAATTCTCTGTTAGACCTATTTTCTCAGTGCTaGAGAGATGGATCAGGATTTAAGAACATTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHNSLLDLFSQC*RDGSGFKNIVW Trigger: CCAGACAATGTTCTTAAATCCTGATCCATCTCTCAAGCACTGAGAAAATAGGTCTAACAGAGAATTGTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR TCA 90 bp | ATTGTATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGAGGGTCAGAAATTCTTaGGTATTTGCCATCAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: IVYTSKILLKGPRYSCLLRVRNS*VFAINL Trigger: TAGATTGATGGCAAATACTCAAGAATTTCTGACCCT...CAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTTTGTAAAAGCCAAGTaGATGAGAATAAGGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: IVYTSKILLKGPRYSCLLFVKAK*MRIRCT Trigger: TGTACACCTTATTCTCATCCACTTGGCTTTTACAAA...CAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| 3UTR CAA 72 bp | GGATGTAATAGCTTTATACAGGGTTGGGATATTTTCTaGTACAGAATTCTTGGAGTTGTCACCACATTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GCNSFIQGWDIF*YRILGVVTTLD Trigger: ATCTAATGTGGTGACAACTCCAAGAATTCTGTACAAGAAAATATCCCAACCCTGTATAAAGCTATTACATCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CAA 90 bp | GGATGGATCACAGGGAACCCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGTCAGAAATTCTaGAGTATTTGCCATCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: GWITGNPMEELEKVTKELKGQKF*SICHQS Trigger: AGATTGATGGCAAATACTCAAGAATTTCTGACCCTT...TAGCTCCTTGGTTACTTTCTCTAGCTCCTCCATTGGGTTCCCTGTGATCCATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS GCA 90 bp | ATTAAAGCATTGAGTATCCAAAAGTATAGGAAGAATAAAAGGATGTaGCATGCAGACCTTGGCCTTAGTCTGCTCCACCTAGATGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IKALSIQKYRKNKRM*HADLGLSLLHLDAL Trigger: CAGAGCATCTAGGTGGAGCAGACTAAGGCCAAGGTCTGCATGGCACATCCTTTTATTCTTCCTATACTTTTGGATACTCAATGCTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119931.3 ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CAA 90 bp | ATTCCAGTCTCACTTCTTGCTGCCACAGCTGCATATTATCTTGGGGAGACACAATTTGCCATCAATCTATaGTCCCTTGAAAAGAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: IPVSLLAATAAYYLGETQFAINL*SLEKRL Trigger: AAGTCTCTTTTCAAGGGACAATAGATTGATGGCAAA...TTGTGTCTCCCCAAGATAATATGCAGCTGTGGCAGCAAGAAGTGAGACTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CAA 90 bp | ATCACAGGGAACCCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGAAGAAATTCTTGAGTATTaGCCATCAATCTATTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ITGNPMEELEKVTKELKEEILEY*PSIYCP Trigger: GGGACAATAGATTGATGGCAAATACTCAAGAATTTC...TTCCTTTAGCTCCTTGGTTACTTTCTCTAGCTCCTCCATTGGGTTCCCTGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCTAAGGCACAGGACATGCACATGTTGCACAACAATCAATGCAGACAAAATGAAATTCTTGAGTATTaGCCATCAATCTATTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSKAQDMHMLHNNQCRQNEILEY*PSIYCP Trigger: GGGACAATAGATTGATGGCAAATACTCAAGAATTTC...ATTTTGTCTGCATTGATTGTTGTGCAACATGTGCATGTCCTGTGCCTTAGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS GCA 90 bp | GATCTTACAACCTATGGCATCTGGGAAGTTTCTCAAACCAAAAACTaGTACTGTCTTTGGCAGTCCTTTTGTAAGAAGGATTATGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: DLTTYGIWEVSQTKN*YCLWQSFCKKDYDV Trigger: AACATCATAATCCTTCTTACAAAAGGACTGCCAAAGACAGTAGCAGTTTTTGGTTTGAGAAACTTCCCAGATGCCATAGGTTGTAAGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119931.3 ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGTTCAATGCTGTAAATCACCTGGAAGACTGTCTGACAACAATAACATGTTTGCCATCAATCTATaGTCCCTTGAAAAGAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LSVQCCKSPGRLSDNNNMFAINL*SLEKRL Trigger: AAGTCTCTTTTCAAGGGACAATAGATTGATGGCAAA...CATGTTATTGTTGTCAGACAGTCTTCCAGGTGATTTACAGCATTGAACTGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236800.2 ENSMUST00000237024.2 |
||
| CDS GCA 72 bp | CCCGTCCTTGTGAATCAGCACCAAGGGGCTAAAAGTTaGATAACCAAGGGTCAGAAATTCTTGAGTATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PVLVNQHQGAKS*ITKGQKFLSIC Trigger: GCAAATACTCAAGAATTTCTGACCCTTGGTTATGCAACTTTTAGCCCCTTGGTGCTGATTCACAAGGACGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119931.3 ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| CDS CCA 72 bp | TGGGAAGTTTCTCAAACCAAAAACTGCTACTGTCTTTaGCAGTCCTTTTGTAAGAAGGATTATGATGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: WEVSQTKNCYCL*QSFCKKDYDVC Trigger: ACAAACATCATAATCCTTCTTACAAAAGGACTGCCAAAGACAGTAGCAGTTTTTGGTTTGAGAAACTTCCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119931.3 ENSMUST00000236800.2 ENSMUST00000237024.2 |
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| CDS CAA 72 bp | AAGTTGCATAACCAAGGGTCAGAAATTCTTGAGTATTaGCCATCAATCTATTGTCCCTTGAAAAGAGACTTA | + |
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Preference number: 6 (lower is better) Translates to: KLHNQGSEILEY*PSIYCPLKRDL Trigger: TAAGTCTCTTTTCAAGGGACAATAGATTGATGGCAAATACTCAAGAATTTCTGACCCTTGGTTATGCAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119931.3 ENSMUST00000236800.2 ENSMUST00000237024.2 |
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